Upload dify_CECs_annotating.yml

You can directly import the dify_CECs_annotating.yml file, which contains workflow information, into the Dify platform without the need to manually create the workflow.

dify_CECs_annotating.yml

@@ -0,0 +1,1343 @@
+app:
+  description: ''
+  icon: 🤖
+  icon_background: '#FFEAD5'
+  mode: advanced-chat
+  name: CECs_annotating
+  use_icon_as_answer_icon: false
+dependencies:
+- current_identifier: null
+  type: marketplace
+  value:
+    marketplace_plugin_unique_identifier: langgenius/openai:0.2.6@e2665624a156f52160927bceac9e169bd7e5ae6b936ae82575e14c90af390e6e
+    version: null
+kind: app
+version: 0.4.0
+workflow:
+  conversation_variables: []
+  environment_variables: []
+  features:
+    file_upload:
+      allowed_file_extensions:
+      - .JPG
+      - .JPEG
+      - .PNG
+      - .GIF
+      - .WEBP
+      - .SVG
+      allowed_file_types:
+      - image
+      allowed_file_upload_methods:
+      - local_file
+      - remote_url
+      enabled: false
+      fileUploadConfig:
+        audio_file_size_limit: 50
+        batch_count_limit: 5
+        file_size_limit: 15
+        image_file_size_limit: 10
+        video_file_size_limit: 100
+        workflow_file_upload_limit: 10
+      image:
+        enabled: false
+        number_limits: 3
+        transfer_methods:
+        - local_file
+        - remote_url
+      number_limits: 3
+    opening_statement: ''
+    retriever_resource:
+      enabled: true
+    sensitive_word_avoidance:
+      enabled: false
+    speech_to_text:
+      enabled: false
+    suggested_questions: []
+    suggested_questions_after_answer:
+      enabled: false
+    text_to_speech:
+      enabled: false
+      language: ''
+      voice: ''
+  graph:
+    edges:
+    - data:
+        isInLoop: false
+        sourceType: llm
+        targetType: code
+      id: 1760433170399-source-1760431395870-target
+      selected: false
+      source: '1760433170399'
+      sourceHandle: source
+      target: '1760431395870'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInIteration: false
+        isInLoop: false
+        sourceType: start
+        targetType: llm
+      id: 1760360355141-source-1764831451652-target
+      selected: false
+      source: '1760360355141'
+      sourceHandle: source
+      target: '1764831451652'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: start
+        targetType: llm
+      id: 1760360355141-source-1760433170399-target
+      selected: false
+      source: '1760360355141'
+      sourceHandle: source
+      target: '1760433170399'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: start
+        targetType: knowledge-retrieval
+      id: 1760360355141-source-1763020657891-target
+      selected: false
+      source: '1760360355141'
+      sourceHandle: source
+      target: '1763020657891'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInIteration: false
+        isInLoop: false
+        sourceType: code
+        targetType: tool
+      id: 1760431395870-source-1764862201148-target
+      selected: false
+      source: '1760431395870'
+      sourceHandle: source
+      target: '1764862201148'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: code
+        targetType: tool
+      id: 1764831538955-source-1764904930952-target
+      selected: false
+      source: '1764831538955'
+      sourceHandle: source
+      target: '1764904930952'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: llm
+        targetType: code
+      id: 1764831451652-source-1764831538955-target
+      source: '1764831451652'
+      sourceHandle: source
+      target: '1764831538955'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: tool
+        targetType: llm
+      id: 1764904930952-source-1766991784354-target
+      selected: false
+      source: '1764904930952'
+      sourceHandle: source
+      target: '1766991784354'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: tool
+        targetType: llm
+      id: 1764862201148-source-1766991784354-target
+      selected: false
+      source: '1764862201148'
+      sourceHandle: source
+      target: '1766991784354'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInLoop: false
+        sourceType: knowledge-retrieval
+        targetType: llm
+      id: 1763020657891-source-1766991784354-target
+      selected: false
+      source: '1763020657891'
+      sourceHandle: source
+      target: '1766991784354'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    - data:
+        isInIteration: false
+        isInLoop: false
+        sourceType: llm
+        targetType: answer
+      id: 1766991784354-source-1767855070087-target
+      selected: false
+      source: '1766991784354'
+      sourceHandle: source
+      target: '1767855070087'
+      targetHandle: target
+      type: custom
+      zIndex: 0
+    nodes:
+    - data:
+        selected: false
+        title: start
+        type: start
+        variables: []
+      height: 52
+      id: '1760360355141'
+      position:
+        x: 12.361104149871096
+        y: 251
+      positionAbsolute:
+        x: 12.361104149871096
+        y: 251
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        code: "import re\n\ndef main(arg1: str) -> dict:\n    arg1 = re.sub(r'<sql>\\\
+          s*</sql>', '', arg1)\n    arg1 = arg1.replace('\\n', ' ')\n    sql_pattern\
+          \ = r'<sql>(?:(?!<sql>).)*?</sql>'\n    matches = re.findall(sql_pattern,\
+          \ arg1, re.DOTALL)\n    if matches:\n        last_sql_tag = matches[-1].strip()\n\
+          \        pure_sql = last_sql_tag.replace('<sql>', '').replace('</sql>',\
+          \ '').strip()\n        return {\"result\": pure_sql}\n    else:\n      \
+          \  return {\"error\": \"No SQL statement wrapped in <sql> tags found\"}"
+        code_language: python3
+        outputs:
+          result:
+            children: null
+            type: string
+        selected: false
+        title: executecode2
+        type: code
+        variables:
+        - value_selector:
+          - '1760433170399'
+          - text
+          value_type: string
+          variable: arg1
+      height: 52
+      id: '1760431395870'
+      position:
+        x: 632
+        y: 251
+      positionAbsolute:
+        x: 632
+        y: 251
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        context:
+          enabled: true
+          variable_selector:
+          - sys
+          - query
+        model:
+          completion_params: {}
+          mode: chat
+          name: gpt-5
+          provider: langgenius/openai/openai
+        prompt_template:
+        - id: abc810d5-7d5d-486e-9c65-26a8e231aa2a
+          role: system
+          text: '# Role
+
+            You are a professional MySQL generation assistant, specializing in generating
+            SQL statements for the 【pubchemlite_exposomics_20251226】 database. Please
+            generate SQL query statements based on user requirements {{#context#}}.
+            You must strictly follow the requirements below and are not allowed to
+            deviate from the rules or generate irrelevant content.
+
+
+            # Core Rules
+
+            - Must convert users'' natural language questions into valid MySQL query
+            statements that only target the "local compound database". Forbidden to
+            generate write operations such as creating tables, modifying tables, or
+            deleting data; only SELECT queries are supported.
+
+            - The generated MySQL statements must be completely enclosed within <sql>
+            and </sql> tags. Necessary explanations can be added outside the tags
+            (non-mandatory), but only pure SQL statements should be kept inside the
+            tags.
+
+            - Only allowed to use existing tables in the current compound database
+            (fixed table name: pubchemlite_ccs) and the fields XLogP, BioPathway,
+            ToxicityInfo, KnownUse, DisorderDisease. Forbidden to generate irrelevant
+            tables or fields on your own; field spellings must strictly correspond,
+            no errors, additions, or deletions allowed.
+
+            - If the user''s question does not specify query conditions, default to
+            querying the above five columns of information for all compounds. If other
+            fields are involved, you must explain outside the tags: "Currently only
+            the XLogP, BioPathway, ToxicityInfo, KnownUse, and DisorderDisease columns
+            are supported for querying; other fields cannot be queried", and do not
+            generate invalid SQL.
+
+
+            # Database Table Relationship Description
+
+            The current compound database only involves a single compound data table
+            (no multi-table associations). All queries are based on this single table,
+            and multi-table operations such as JOIN are not required.
+
+
+            # Example Reference
+
+            1. User question: “1,2,4-trichlorobenzene”
+
+            Generated result:
+
+            <sql> SELECT CompoundName, XLogP, BioPathway, ToxicityInfo, KnownUse,
+            DisorderDisease FROM pubchemlite_exposomics_20251226 WHERE CompoundName
+            = ''1,2,4-trichlorobenzene'' LIMIT 10 </sql>'
+        selected: false
+        title: LLM_pubchemlite
+        type: llm
+        vision:
+          enabled: false
+      height: 94
+      id: '1760433170399'
+      position:
+        x: 331
+        y: 251
+      positionAbsolute:
+        x: 331
+        y: 251
+      selected: true
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        dataset_ids:
+        - CuV6X2iaXQgYHKfOjA5DAlyvVPpmF6fPFkrgIBjHqUpD7ENMHgaNSYgwMFm2I99Y
+        multiple_retrieval_config:
+          reranking_enable: false
+          reranking_mode: reranking_model
+          score_threshold: null
+          top_k: 4
+        query_variable_selector:
+        - '1760360355141'
+        - sys.query
+        retrieval_mode: multiple
+        selected: false
+        title: 知识检索
+        type: knowledge-retrieval
+      height: 90
+      id: '1763020657891'
+      position:
+        x: 331
+        y: 526.5353719125708
+      positionAbsolute:
+        x: 331
+        y: 526.5353719125708
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        context:
+          enabled: true
+          variable_selector:
+          - sys
+          - query
+        model:
+          completion_params: {}
+          mode: chat
+          name: gpt-5
+          provider: langgenius/openai/openai
+        prompt_template:
+        - id: b9a3fcd8-9a77-47fe-9c25-2a60a0c014eb
+          role: system
+          text: "# Role\nYou are a professional MySQL generation assistant, specialized\
+            \ in generating query statements for the [InvitroDB v4.3] toxicity database.\n\
+            \n# Core Task\nWhen a user inputs a compound name{{#context#}}, automatically\
+            \ generate the corresponding SQL query statement to retrieve toxicity\
+            \ test data for that compound.\n\n# Output Format\nThe generated SQL statement\
+            \ must be completely enclosed within `<sql>` and `</sql>` tags.\n\n# Query\
+            \ Template (Fixed)\nUse the following SQL template, replacing [Compound\
+            \ Name] with the actual compound name entered by the user:\n\n<sql>\n\
+            SELECT DISTINCT \n    c.chnm AS compound_name,\n    c.casn AS CASRN, \n\
+            \    ace.assay_component_endpoint_name AS endpoint_name\nFROM chemical\
+            \ c, chemical_analytical_qc caq, mc0 m, assay_component_endpoint ace\n\
+            WHERE c.dsstox_substance_id = caq.dsstox_substance_id\n  AND caq.spid\
+            \ = m.spid\n  AND m.acid = ace.acid\n  AND c.chnm = 'Acetamide'\nORDER\
+            \ BY endpoint_name;\n</sql>\n\n# Operation Rules\n1. Users only need to\
+            \ input the compound name, e.g.: Dehydroacetic acid\n2. You only need\
+            \ to replace the user's input compound name into WHERE c.chnm = '[User-Entered\
+            \ Compound Name]'\n3. Keep all other parts of the SQL statement completely\
+            \ unchanged\n4. The output should only contain the <sql>...</sql> tags\
+            \ and the SQL statement within them\n\n# Example\nUser input: Dehydroacetic\
+            \ acid\n\nYour output should be:\n<sql>\nSELECT DISTINCT \n    c.chnm\
+            \ AS compound_name,\n    c.casn AS CASRN, \n    ace.assay_component_endpoint_name\
+            \ AS endpoint_name\nFROM chemical c, chemical_analytical_qc caq, mc0 m,\
+            \ assay_component_endpoint ace\nWHERE c.dsstox_substance_id = caq.dsstox_substance_id\n\
+            \  AND caq.spid = m.spid\n  AND m.acid = ace.acid\n  AND c.chnm = 'Dehydroacetic\
+            \ acid'\nORDER BY endpoint_name;\n</sql>"
+        selected: false
+        title: LLM_invitrodb
+        type: llm
+        vision:
+          enabled: false
+      height: 94
+      id: '1764831451652'
+      position:
+        x: 331
+        y: 6.037674605748222
+      positionAbsolute:
+        x: 331
+        y: 6.037674605748222
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        code: "import re\n\ndef main(arg1: str) -> dict:\n    arg1 = re.sub(r'<sql>\\\
+          s*</sql>', '', arg1)\n    arg1 = arg1.replace('\\n', ' ')\n    sql_pattern\
+          \ = r'<sql>(?:(?!<sql>).)*?</sql>'\n    matches = re.findall(sql_pattern,\
+          \ arg1, re.DOTALL)\n    if matches:\n        last_sql_tag = matches[-1].strip()\n\
+          \        pure_sql = last_sql_tag.replace('<sql>', '').replace('</sql>',\
+          \ '').strip()\n        return {\"result\": pure_sql}\n    else:\n      \
+          \  return {\"error\": \"No SQL statement wrapped in <sql> tags found\"}"
+        code_language: python3
+        outputs:
+          result:
+            children: null
+            type: string
+        selected: false
+        title: executecode
+        type: code
+        variables:
+        - value_selector:
+          - '1764831451652'
+          - text
+          value_type: string
+          variable: arg1
+      height: 52
+      id: '1764831538955'
+      position:
+        x: 608.8380905747413
+        y: 6.037674605748222
+      positionAbsolute:
+        x: 608.8380905747413
+        y: 6.037674605748222
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        is_team_authorization: true
+        paramSchemas:
+        - auto_generate: null
+          default: null
+          form: llm
+          human_description:
+            en_US: Target database identifier (case-sensitive)
+            ja_JP: Target database identifier (case-sensitive)
+            pt_BR: Target database identifier (case-sensitive)
+            zh_Hans: Target database identifier (case-sensitive)
+          label:
+            en_US: db_identifier
+            ja_JP: db_identifier
+            pt_BR: db_identifier
+            zh_Hans: db_identifier
+          llm_description: Target database identifier (case-sensitive)
+          max: null
+          min: null
+          name: db_identifier
+          options: []
+          placeholder:
+            en_US: Target database identifier (case-sensitive)
+            ja_JP: Target database identifier (case-sensitive)
+            pt_BR: Target database identifier (case-sensitive)
+            zh_Hans: Target database identifier (case-sensitive)
+          precision: null
+          required: true
+          scope: null
+          template: null
+          type: string
+        - auto_generate: null
+          default: null
+          form: llm
+          human_description:
+            en_US: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            ja_JP: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            pt_BR: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            zh_Hans: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+          label:
+            en_US: sql
+            ja_JP: sql
+            pt_BR: sql
+            zh_Hans: sql
+          llm_description: 'Valid MySQL SELECT query (only):
+
+            ## pubchemlite (core table: pubchemlite_ccs)
+
+            Key fields:
+
+            - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+            - Literature/Patent: PubMed_Count, Patent_Count
+
+            - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+            - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+            (escape special chars!)
+
+
+            ## invitrodb_v4_3 (core tables)
+
+            - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+            - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+            - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+            - assay_component: acid, assay_component_name (toxicity type)
+
+            '
+          max: null
+          min: null
+          name: sql
+          options: []
+          placeholder:
+            en_US: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            ja_JP: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            pt_BR: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            zh_Hans: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+          precision: null
+          required: true
+          scope: null
+          template: null
+          type: string
+        params:
+          db_identifier: ''
+          sql: ''
+        provider_id: 718b1b16-54d4-44f2-bc49-3a36d506d557
+        provider_name: sql_executor_pubchemlite_invitrodb_en
+        provider_type: api
+        selected: false
+        title: executeSqlPost
+        tool_configurations: {}
+        tool_description: 'Execute read-only SELECT queries on pubchemlite or invitrodb_v4_3
+          database.
+
+          Notes:
+
+          1. Only SELECT operation is allowed (INSERT/UPDATE/DELETE/DROP are prohibited);
+
+          2. For fields with special characters (e.g. pred_CCS_A2_[M+H]+ in pubchemlite),
+          escape []/+ with backslash (\) or use backticks (`);
+
+          3. Avoid Python format characters (%, A, s, d) in SQL to prevent parsing
+          errors;
+
+          4. Add LIMIT clause to avoid large result sets (recommended LIMIT 100).
+
+          '
+        tool_label: executeSqlPost
+        tool_name: executeSqlPost
+        tool_node_version: '2'
+        tool_parameters:
+          db_identifier:
+            type: mixed
+            value: invitrodb_v4_3
+          sql:
+            type: mixed
+            value: '{{#1764831538955.result#}}'
+        type: tool
+      height: 52
+      id: '1764904930952'
+      position:
+        x: 893.4512104881396
+        y: 6.037674605748222
+      positionAbsolute:
+        x: 893.4512104881396
+        y: 6.037674605748222
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        is_team_authorization: true
+        paramSchemas:
+        - auto_generate: null
+          default: null
+          form: llm
+          human_description:
+            en_US: Target database identifier (case-sensitive)
+            ja_JP: Target database identifier (case-sensitive)
+            pt_BR: Target database identifier (case-sensitive)
+            zh_Hans: Target database identifier (case-sensitive)
+          label:
+            en_US: db_identifier
+            ja_JP: db_identifier
+            pt_BR: db_identifier
+            zh_Hans: db_identifier
+          llm_description: Target database identifier (case-sensitive)
+          max: null
+          min: null
+          name: db_identifier
+          options: []
+          placeholder:
+            en_US: Target database identifier (case-sensitive)
+            ja_JP: Target database identifier (case-sensitive)
+            pt_BR: Target database identifier (case-sensitive)
+            zh_Hans: Target database identifier (case-sensitive)
+          precision: null
+          required: true
+          scope: null
+          template: null
+          type: string
+        - auto_generate: null
+          default: null
+          form: llm
+          human_description:
+            en_US: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            ja_JP: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            pt_BR: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            zh_Hans: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+          label:
+            en_US: sql
+            ja_JP: sql
+            pt_BR: sql
+            zh_Hans: sql
+          llm_description: 'Valid MySQL SELECT query (only):
+
+            ## pubchemlite (core table: pubchemlite_ccs)
+
+            Key fields:
+
+            - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+            - Literature/Patent: PubMed_Count, Patent_Count
+
+            - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+            - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+            (escape special chars!)
+
+
+            ## invitrodb_v4_3 (core tables)
+
+            - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+            - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+            - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+            - assay_component: acid, assay_component_name (toxicity type)
+
+            '
+          max: null
+          min: null
+          name: sql
+          options: []
+          placeholder:
+            en_US: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            ja_JP: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            pt_BR: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+            zh_Hans: 'Valid MySQL SELECT query (only):
+
+              ## pubchemlite (core table: pubchemlite_ccs)
+
+              Key fields:
+
+              - Basic info: Identifier, CompoundName, MolecularFormula, SMILES, XLogP
+
+              - Literature/Patent: PubMed_Count, Patent_Count
+
+              - Toxicity/Property: SafetyInfo, ToxicityInfo, MonoisotopicMass
+
+              - Predicted CCS: pred_CCS_A2_[M+H]+, pred_CCS_A2_[M+Na]+, pred_CCS_A2_[M-H]-
+              (escape special chars!)
+
+
+              ## invitrodb_v4_3 (core tables)
+
+              - assay: aid, assay_name, organism, tissue, ncbi_taxon_id
+
+              - chemical: chid, casn, chnm (chemical name), dsstox_substance_id
+
+              - mc0: m0id, acid, spid, conc (concentration μM), rval (response value)
+
+              - assay_component: acid, assay_component_name (toxicity type)
+
+              '
+          precision: null
+          required: true
+          scope: null
+          template: null
+          type: string
+        params:
+          db_identifier: ''
+          sql: ''
+        provider_id: 718b1b16-54d4-44f2-bc49-3a36d506d557
+        provider_name: sql_executor_pubchemlite_invitrodb_en
+        provider_type: api
+        selected: false
+        title: executeSqlPost2
+        tool_configurations: {}
+        tool_description: 'Execute read-only SELECT queries on pubchemlite or invitrodb_v4_3
+          database.
+
+          Notes:
+
+          1. Only SELECT operation is allowed (INSERT/UPDATE/DELETE/DROP are prohibited);
+
+          2. For fields with special characters (e.g. pred_CCS_A2_[M+H]+ in pubchemlite),
+          escape []/+ with backslash (\) or use backticks (`);
+
+          3. Avoid Python format characters (%, A, s, d) in SQL to prevent parsing
+          errors;
+
+          4. Add LIMIT clause to avoid large result sets (recommended LIMIT 100).
+
+          '
+        tool_label: executeSqlPost
+        tool_name: executeSqlPost
+        tool_node_version: '2'
+        tool_parameters:
+          db_identifier:
+            type: mixed
+            value: pubchemlite
+          sql:
+            type: mixed
+            value: '{{#1760431395870.result#}}'
+        type: tool
+      height: 52
+      id: '1764862201148'
+      position:
+        x: 933.9456071364291
+        y: 251
+      positionAbsolute:
+        x: 933.9456071364291
+        y: 251
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        context:
+          enabled: true
+          variable_selector:
+          - '1763020657891'
+          - result
+        model:
+          completion_params: {}
+          mode: chat
+          name: gpt-5
+          provider: langgenius/openai/openai
+        prompt_template:
+        - id: 97778cb2-a8cc-449a-8a05-41b9c67f1450
+          role: system
+          text: "Now, as an environmental chemist, your role is to classify unidentified\
+            \ chemicals. You have in-depth knowledge of formal names, commonly-used\
+            \ terms, and scientific terminologies based on the 'IUPAC Naming.' Your\
+            \ extensive training using the 'NORMAN Network' database and understanding\
+            \ of environmental pollution of chemical substances helps in correctly\
+            \ classifying chemicals.\nWhen a chemical name {{#sys.query#}} is presented,\
+            \ your task is to complete the following steps:\nIdentify and Classify: Determine\
+            \ the chemical's structure and categorize it into one of the known categories\
+            \ in the 'NORMAN Network'. Your classification should fall into one of\
+            \ these 9 categories:\na: Pharmaceuticals and Personal Care Products\n\
+            b: Pesticide\nc: Food Additives\nd: Endogenous Substances\ne: Natural\
+            \ Toxins\nf: Disinfection By-Products\ng: Metals and Their Compounds\n\
+            h: Commercialized Industrial Chemicals\ni: Industrial Intermediates and\
+            \ Transformation Products\nIntegrate Provided Data: Use the data provided\
+            \ from the external queries to enrich the output.\nFrom {{#1764904930952.text#}} (in\
+            \ vitro high-throughput screening data), you will receive information. Important:\
+            \ The data may contain a list of endpoint_name. You must extract the CASRN and ALL endpoint_name values.\n\
+            From {{#1764862201148.text#}}(compound-related data), you will receive\
+            \ information such as CompoundName, XLogP, BioPathway, ToxicityInfo, KnownUse,\
+            \ DisorderDisease.\nSynthesize Response: Combine the official Norman classification\
+            \ context ({{#context#}}), the classification decision, and the data from\
+            \ the two queries into a single, structured JSON response.\nGuidelines:\n\
+            If the chemical is not listed in the 'NORMAN Network', use your knowledge\
+            \ of its structure to assign the most appropriate category.\nIf a chemical\
+            \ fits into multiple categories, provide up to three most common categories,\
+            \ listing the primary category first.\nAlways include the data fields\
+            \ from {{#1764904930952.text#}} and {{#1764862201148.text#}} in the output\
+            \ JSON, as they are provided.\nFor the screening data:\nExtract the CASRN。\n\
+            Extract ALL endpoint_name values。\nThe EndpointName field should be a\
+            \ list containing all endpoint names.\nIf any field from the provided\
+            \ data is empty or not applicable, set its value to null.\nResponse Format:\n\
+            You must respond strictly in the following concise JSON format:\n{\n \
+            \   \"ChemicalName\": {\n        \"Main Category\": \"Primary Norman Category\
+            \ \",\n        \"Additional Category 1\": \"Secondary Category (if applicable)\"\
+            ,\n        \"Additional Category 2\": \"Tertiary Category (if applicable)\"\
+            ,\n        \"EndpointName\": [\"List\", \"of\", \"ALL\", \"endpoint_name\"\
+            , \"values\", \"from\", \"{{#1764904930952.text#}}\"],\n        \"XLogP\"\
+            : \"Value from {{#1764862201148.text#}} or null\",\n        \"BioPathway\"\
+            : \"Value from {{#1764862201148.text#}} or null\",\n        \"ToxicityInfo\"\
+            : \"Value from {{#1764862201148.text#}} or null\",\n        \"KnownUse\"\
+            : \"Value from {{#1764862201148.text#}} or null\",\n        \"DisorderDisease\"\
+            : \"Value from {{#1764862201148.text#}} or null\"\n    }\n}\nPlease abide\
+            \ by the format and guidelines strictly."
+        selected: false
+        title: LLM 3
+        type: llm
+        vision:
+          enabled: false
+      height: 94
+      id: '1766991784354'
+      position:
+        x: 1321.7474382338496
+        y: 231.05966931475012
+      positionAbsolute:
+        x: 1321.7474382338496
+        y: 231.05966931475012
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom
+      width: 242
+    - data:
+        author: LQH
+        desc: ''
+        height: 88
+        selected: false
+        showAuthor: true
+        text: '{"root":{"children":[{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"Query
+          the columns of CompoundName, XLogP, BioPathway, ToxicityInfo, KnownUse,
+          and DisorderDisease in the pubchemlite database in strict accordance with
+          the specified SQL format.","type":"text","version":1}],"direction":"ltr","format":"","indent":0,"type":"paragraph","version":1,"textFormat":0,"textStyle":""}],"direction":"ltr","format":"","indent":0,"type":"root","version":1}}'
+        theme: blue
+        title: ''
+        type: ''
+        width: 834
+      height: 88
+      id: '1767840238946'
+      position:
+        x: 331
+        y: 376.00337970608007
+      positionAbsolute:
+        x: 331
+        y: 376.00337970608007
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom-note
+      width: 834
+    - data:
+        author: LQH
+        desc: ''
+        height: 88
+        selected: false
+        showAuthor: true
+        text: '{"root":{"children":[{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"Design
+          SQL query statements to enable 4o to execute simple compound name replacement
+          steps, realizing the function that when a user inputs a compound name, the
+          system outputs the queried CASRN and endpoint name.","type":"text","version":1}],"direction":"ltr","format":"","indent":0,"type":"paragraph","version":1,"textFormat":0,"textStyle":""}],"direction":"ltr","format":"","indent":0,"type":"root","version":1}}'
+        theme: blue
+        title: ''
+        type: ''
+        width: 831
+      height: 88
+      id: '1767840343034'
+      position:
+        x: 331
+        y: 113.12459577875379
+      positionAbsolute:
+        x: 331
+        y: 113.12459577875379
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom-note
+      width: 831
+    - data:
+        author: LQH
+        desc: ''
+        height: 88
+        selected: false
+        showAuthor: true
+        text: '{"root":{"children":[{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"Query
+          the compound classifications in the Norman classification database.","type":"text","version":1}],"direction":"ltr","format":"","indent":0,"type":"paragraph","version":1,"textFormat":0,"textStyle":""}],"direction":"ltr","format":"","indent":0,"type":"root","version":1}}'
+        theme: blue
+        title: ''
+        type: ''
+        width: 475
+      height: 88
+      id: '1767840353651'
+      position:
+        x: 335.38017996692156
+        y: 637.5054022130926
+      positionAbsolute:
+        x: 335.38017996692156
+        y: 637.5054022130926
+      selected: false
+      sourcePosition: right
+      targetPosition: left
+      type: custom-note
+      width: 475
+    - data:
+        author: LQH
+        desc: ''
+        height: 313
+        selected: false
+        showAuthor: true
+        text: '{"root":{"children":[{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"It
+          is required to strictly output the query results from the three databases
+          in JSON format, which include the following fields:","type":"text","version":1}],"direction":"ltr","format":"start","indent":0,"type":"paragraph","version":1,"textFormat":0,"textStyle":""},{"children":[{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"ChemicalName","type":"text","version":1}],"direction":"ltr","format":"start","indent":0,"type":"listitem","version":1,"value":1},{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"MainCategory","type":"text","version":1}],"direction":"ltr","format":"start","indent":0,"type":"listitem","version":1,"value":2},{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"AdditionalCategory1","type":"text","version":1}],"direction":"ltr","format":"start","indent":0,"type":"listitem","version":1,"value":3},{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"AdditionalCategory2","type":"text","version":1}],"direction":"ltr","format":"start","indent":0,"type":"listitem","version":1,"value":4},{"children":[{"detail":0,"format":0,"mode":"normal","style":"","text":"EndpointName
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