| """Phase 2 training pipelines. | |
| These modules require torch_geometric and a GPU. They produce checkpoints | |
| under `gemeo/artifacts/` that the runtime modules pick up automatically. | |
| Run order: | |
| 1. python -m gemeo.train.primekg — ingest PrimeKG into our schema | |
| 2. python -m gemeo.train.hgt — train patient HGT encoder | |
| 3. python -m gemeo.train.txgnn — fine-tune TxGNN for drug repurposing | |
| 4. python -m gemeo.train.tgnn — train trajectory TGN over snapshot chains | |
| 5. python -m gemeo.train.neuralsurv — train survival head | |
| All scripts can be re-run independently. See `gemeo/train/README.md`. | |
| """ | |