Reduanul1997 commited on
Commit
f9d41d3
·
verified ·
1 Parent(s): 0390b68

Results epoch 51

Browse files
Files changed (1) hide show
  1. baseline_results.json +67 -49
baseline_results.json CHANGED
@@ -1,56 +1,33 @@
1
  {
2
  "experiment": "Baseline Original 3D U-Net",
3
- "status": "completed",
4
- "completed_epochs": 50,
 
5
  "best_epoch": 45,
6
  "best_validation_dice": 0.7721250271246268,
7
- "best_epoch_metrics": {
8
- "epoch": 45,
9
- "learning_rate": 3.5111757055874303e-06,
10
- "train_loss": 0.3746598991407018,
11
- "val_loss": 0.476624794908472,
12
- "train_dice": 0.84932605254679,
13
- "val_dice": 0.7721250271246268,
14
- "train_dice_macro_all": 0.8824622418971645,
15
- "val_dice_macro_all": 0.8239281408112812,
16
- "train_tumor_dice": 0.9395233504399889,
17
- "val_tumor_dice": 0.9241284054564372,
18
- "train_iou": 0.7384798154511153,
19
- "val_iou": 0.6346612539007251,
20
- "train_tumor_iou": 0.8859444013498974,
21
- "val_tumor_iou": 0.8589578999420441,
22
- "train_precision": 0.9468324232065657,
23
- "val_precision": 0.9469938214247372,
24
- "train_recall": 0.9323262580137129,
25
- "val_recall": 0.9023411402697056,
26
- "train_fnr": 0.06767374198628705,
27
- "val_fnr": 0.09765885973029444,
28
- "train_fpr": 0.015851784619549208,
29
- "val_fpr": 0.014180152025839282,
30
- "train_TP": 16700075,
31
- "train_TN": 58220310,
32
- "train_FP": 937761,
33
- "train_FN": 1212190,
34
- "val_TP": 3837129,
35
- "val_TN": 14931465,
36
- "val_FP": 214776,
37
- "val_FN": 415286,
38
- "val_dice_background": 0.9793374818712444,
39
- "val_dice_ncr_net": 0.6698967303134118,
40
- "val_dice_edema": 0.801320658082598,
41
- "val_dice_enhancing": 0.8451576929778707,
42
- "val_iou_background": 0.9595115569313988,
43
- "val_iou_ncr_net": 0.503642646086615,
44
- "val_iou_edema": 0.6685029349056847,
45
- "val_iou_enhancing": 0.7318381807098756,
46
- "epoch_seconds": 398.597907
47
- },
48
- "total_training_seconds": 14417.651626,
49
- "files": {
50
- "best_model": "/kaggle/working/baseline_3dunet_results/baseline_best_model.pth",
51
- "latest_checkpoint": "/kaggle/working/baseline_3dunet_results/baseline_latest_checkpoint.pth",
52
- "history_csv": "/kaggle/working/baseline_3dunet_results/baseline_history.csv",
53
- "results_json": "/kaggle/working/baseline_3dunet_results/baseline_results.json"
54
  },
55
  "history": [
56
  {
@@ -2102,6 +2079,47 @@
2102
  "val_iou_edema": 0.673685773055962,
2103
  "val_iou_enhancing": 0.7137133904088354,
2104
  "epoch_seconds": 416.356897
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2105
  }
2106
  ]
2107
  }
 
1
  {
2
  "experiment": "Baseline Original 3D U-Net",
3
+ "status": "training",
4
+ "last_completed_epoch": 51,
5
+ "next_epoch": 52,
6
  "best_epoch": 45,
7
  "best_validation_dice": 0.7721250271246268,
8
+ "config": {
9
+ "num_epochs": 50,
10
+ "batch_size": 1,
11
+ "num_classes": 4,
12
+ "model": "Original3DUNet",
13
+ "loss": "Dice + Cross Entropy",
14
+ "patch_size": [
15
+ 64,
16
+ 64,
17
+ 64
18
+ ],
19
+ "modalities": [
20
+ "flair",
21
+ "t1",
22
+ "t1ce",
23
+ "t2"
24
+ ],
25
+ "train_patients": 294,
26
+ "validation_patients": 74,
27
+ "sampling": "Tumor-centered random sampling",
28
+ "dataset": "BraTS2020",
29
+ "excluded_patient": "BraTS20_Training_355",
30
+ "hf_repository": "Reduanul1997/RepositoryBaseLine3DuNet"
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
31
  },
32
  "history": [
33
  {
 
2079
  "val_iou_edema": 0.673685773055962,
2080
  "val_iou_enhancing": 0.7137133904088354,
2081
  "epoch_seconds": 416.356897
2082
+ },
2083
+ {
2084
+ "epoch": 51,
2085
+ "learning_rate": 0.0,
2086
+ "train_loss": 0.36533703647401866,
2087
+ "val_loss": 0.5158799701445812,
2088
+ "train_dice": 0.8550863165959585,
2089
+ "val_dice": 0.7510871968253165,
2090
+ "train_dice_macro_all": 0.8869575969585125,
2091
+ "val_dice_macro_all": 0.8075737551613263,
2092
+ "train_tumor_dice": 0.9411262246091566,
2093
+ "val_tumor_dice": 0.9182617356533097,
2094
+ "train_iou": 0.7470855382567466,
2095
+ "val_iou": 0.6101796263371154,
2096
+ "train_tumor_iou": 0.8887992567969448,
2097
+ "val_tumor_iou": 0.8488760783625314,
2098
+ "train_precision": 0.9481925927002732,
2099
+ "val_precision": 0.9557556434639924,
2100
+ "train_recall": 0.9341644010657464,
2101
+ "val_recall": 0.8835985225479241,
2102
+ "train_fnr": 0.06583559893425366,
2103
+ "val_fnr": 0.11640147745207587,
2104
+ "train_fpr": 0.015256047430495636,
2105
+ "val_fpr": 0.012077077763160275,
2106
+ "train_TP": 16567571,
2107
+ "train_TN": 58429939,
2108
+ "train_FP": 905220,
2109
+ "train_FN": 1167606,
2110
+ "val_TP": 3907217,
2111
+ "val_TN": 14795844,
2112
+ "val_FP": 180875,
2113
+ "val_FN": 514720,
2114
+ "val_dice_background": 0.9770334301693553,
2115
+ "val_dice_ncr_net": 0.6192431222744172,
2116
+ "val_dice_edema": 0.7988443883196326,
2117
+ "val_dice_enhancing": 0.8351740798819,
2118
+ "val_iou_background": 0.9550981028941211,
2119
+ "val_iou_ncr_net": 0.44848092539973433,
2120
+ "val_iou_edema": 0.665063194603139,
2121
+ "val_iou_enhancing": 0.716994759008473,
2122
+ "epoch_seconds": 933.95946
2123
  }
2124
  ]
2125
  }