Add best IMN checkpoints for categorical and single-linear models (100Hz & 500Hz).
Browse files- categorical_imn_100hz/norm_vs_cd/args.yaml +31 -0
- categorical_imn_100hz/norm_vs_cd/best-imn-epoch=18-val_auc=0.9650.ckpt +3 -0
- categorical_imn_100hz/norm_vs_cd/metrics.csv +2 -0
- categorical_imn_100hz/norm_vs_hyp/args.yaml +31 -0
- categorical_imn_100hz/norm_vs_hyp/best-imn-epoch=11-val_auc=0.9276.ckpt +3 -0
- categorical_imn_100hz/norm_vs_hyp/metrics.csv +2 -0
- categorical_imn_100hz/norm_vs_mi/args.yaml +31 -0
- categorical_imn_100hz/norm_vs_mi/best-imn-epoch=24-val_auc=0.9591.ckpt +3 -0
- categorical_imn_100hz/norm_vs_mi/metrics.csv +2 -0
- categorical_imn_100hz/norm_vs_sttc/args.yaml +31 -0
- categorical_imn_100hz/norm_vs_sttc/best-imn-epoch=18-val_auc=0.9748.ckpt +3 -0
- categorical_imn_100hz/norm_vs_sttc/metrics.csv +2 -0
- categorical_imn_500hz/norm_vs_cd/args.yaml +31 -0
- categorical_imn_500hz/norm_vs_cd/best-imn-epoch=21-val_auc=0.9505.ckpt +3 -0
- categorical_imn_500hz/norm_vs_cd/metrics.csv +2 -0
- categorical_imn_500hz/norm_vs_hyp/args.yaml +31 -0
- categorical_imn_500hz/norm_vs_hyp/best-imn-epoch=11-val_auc=0.9030.ckpt +3 -0
- categorical_imn_500hz/norm_vs_hyp/metrics.csv +2 -0
- categorical_imn_500hz/norm_vs_mi/args.yaml +31 -0
- categorical_imn_500hz/norm_vs_mi/best-imn-epoch=18-val_auc=0.9555.ckpt +3 -0
- categorical_imn_500hz/norm_vs_mi/metrics.csv +2 -0
- categorical_imn_500hz/norm_vs_sttc/args.yaml +31 -0
- categorical_imn_500hz/norm_vs_sttc/best-imn-epoch=20-val_auc=0.9589.ckpt +3 -0
- categorical_imn_500hz/norm_vs_sttc/metrics.csv +2 -0
- single_linear_imn_100hz/norm_vs_cd/args.yaml +32 -0
- single_linear_imn_100hz/norm_vs_cd/best-imn-epoch=16-val_auc=0.9697.ckpt +3 -0
- single_linear_imn_100hz/norm_vs_cd/metrics.csv +2 -0
- single_linear_imn_100hz/norm_vs_hyp/args.yaml +32 -0
- single_linear_imn_100hz/norm_vs_hyp/best-imn-epoch=11-val_auc=0.9320.ckpt +3 -0
- single_linear_imn_100hz/norm_vs_hyp/metrics.csv +2 -0
- single_linear_imn_100hz/norm_vs_mi/args.yaml +32 -0
- single_linear_imn_100hz/norm_vs_mi/best-imn-epoch=31-val_auc=0.9631.ckpt +3 -0
- single_linear_imn_100hz/norm_vs_mi/metrics.csv +2 -0
- single_linear_imn_100hz/norm_vs_sttc/args.yaml +32 -0
- single_linear_imn_100hz/norm_vs_sttc/best-imn-epoch=24-val_auc=0.9757.ckpt +3 -0
- single_linear_imn_100hz/norm_vs_sttc/metrics.csv +2 -0
- single_linear_imn_500hz/norm_vs_cd/args.yaml +32 -0
- single_linear_imn_500hz/norm_vs_cd/best-imn-epoch=21-val_auc=0.9494.ckpt +3 -0
- single_linear_imn_500hz/norm_vs_cd/metrics.csv +2 -0
- single_linear_imn_500hz/norm_vs_hyp/args.yaml +32 -0
- single_linear_imn_500hz/norm_vs_hyp/best-imn-epoch=22-val_auc=0.9011.ckpt +3 -0
- single_linear_imn_500hz/norm_vs_hyp/metrics.csv +2 -0
- single_linear_imn_500hz/norm_vs_mi/args.yaml +32 -0
- single_linear_imn_500hz/norm_vs_mi/best-imn-epoch=14-val_auc=0.9507.ckpt +3 -0
- single_linear_imn_500hz/norm_vs_mi/metrics.csv +2 -0
- single_linear_imn_500hz/norm_vs_sttc/args.yaml +32 -0
- single_linear_imn_500hz/norm_vs_sttc/best-imn-epoch=20-val_auc=0.9543.ckpt +3 -0
- single_linear_imn_500hz/norm_vs_sttc/metrics.csv +2 -0
categorical_imn_100hz/norm_vs_cd/args.yaml
ADDED
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accelerator: auto
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batch_size: 64
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ckpt: null
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devices: 1
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dropout: 0.2
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early_stop_min_delta: 0.0
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early_stop_mode: max
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early_stop_monitor: val_auc
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early_stop_patience: 10
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epochs: 100
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inference_only: false
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lambda_l1: 0.0001
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lr: 0.001
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n_neg_viz: 10
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n_pos_viz: 10
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num_workers: 2
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out_dir: runs/imn_ecg_transition_net_GM_100Hz
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path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
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sampling_rate: 100
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scheduler: step
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scheduler_params: '{}'
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seed: 42
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stride: null
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task: norm_vs_cd
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viz_pdf: viz_norm_vs_cd_imn.pdf
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| 26 |
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viz_random: true
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| 27 |
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wandb_name: null
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| 28 |
+
wandb_offline: false
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| 29 |
+
wandb_project: mesormorphic_ecg
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| 30 |
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weight_decay: 0.0001
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| 31 |
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window: null
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categorical_imn_100hz/norm_vs_cd/best-imn-epoch=18-val_auc=0.9650.ckpt
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version https://git-lfs.github.com/spec/v1
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+
oid sha256:2966316c64fcd0af18ef073459e3e4511176e96ec15167bd13d24bff3e1f4dcf
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| 3 |
+
size 1709452
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categorical_imn_100hz/norm_vs_cd/metrics.csv
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accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
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+
0.9207272727272727,0.9053414275623771,0.897025171624714,0.8596491228070176,0.8779395296752519,0.819688850318705,0.9650122057728653
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categorical_imn_100hz/norm_vs_hyp/args.yaml
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accelerator: auto
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batch_size: 64
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ckpt: null
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devices: 1
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dropout: 0.2
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+
early_stop_min_delta: 0.0
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| 7 |
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early_stop_mode: max
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| 8 |
+
early_stop_monitor: val_auc
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| 9 |
+
early_stop_patience: 10
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epochs: 100
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| 11 |
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inference_only: false
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| 12 |
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lambda_l1: 0.0001
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| 13 |
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lr: 0.001
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| 14 |
+
n_neg_viz: 10
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| 15 |
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n_pos_viz: 10
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| 16 |
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num_workers: 2
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out_dir: runs/imn_ecg_transition_net_GM_100Hz
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path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
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| 19 |
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sampling_rate: 100
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scheduler: step
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scheduler_params: '{}'
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seed: 42
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| 23 |
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stride: null
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task: norm_vs_hyp
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viz_pdf: viz_norm_vs_hyp_imn.pdf
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viz_random: true
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wandb_name: null
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+
wandb_offline: false
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| 29 |
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wandb_project: mesormorphic_ecg
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| 30 |
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weight_decay: 0.0001
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| 31 |
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window: null
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categorical_imn_100hz/norm_vs_hyp/best-imn-epoch=11-val_auc=0.9276.ckpt
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+
version https://git-lfs.github.com/spec/v1
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+
oid sha256:b8c45ac4ddfa030e2fe42ccae9df3944edcd467eb3dd6706cadc7ed8c89fa285
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+
size 1709452
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categorical_imn_100hz/norm_vs_hyp/metrics.csv
ADDED
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accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
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| 2 |
+
0.9011841567986933,0.8497542363062591,0.7794970986460348,0.7589453860640302,0.7690839694656489,0.7063431023568247,0.9275561682465059
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categorical_imn_100hz/norm_vs_mi/args.yaml
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accelerator: auto
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batch_size: 64
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ckpt: null
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| 4 |
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devices: 1
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| 5 |
+
dropout: 0.2
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| 6 |
+
early_stop_min_delta: 0.0
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| 7 |
+
early_stop_mode: max
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| 8 |
+
early_stop_monitor: val_auc
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| 9 |
+
early_stop_patience: 10
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| 10 |
+
epochs: 100
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| 11 |
+
inference_only: false
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| 12 |
+
lambda_l1: 0.0001
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| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
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| 15 |
+
n_pos_viz: 10
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| 16 |
+
num_workers: 2
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| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_100Hz
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| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 100
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
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| 22 |
+
seed: 42
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| 23 |
+
stride: null
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| 24 |
+
task: norm_vs_mi
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| 25 |
+
viz_pdf: viz_norm_vs_mi_imn.pdf
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| 26 |
+
viz_random: true
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| 27 |
+
wandb_name: null
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| 28 |
+
wandb_offline: false
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| 29 |
+
wandb_project: mesormorphic_ecg
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| 30 |
+
weight_decay: 0.0001
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| 31 |
+
window: null
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categorical_imn_100hz/norm_vs_mi/best-imn-epoch=24-val_auc=0.9591.ckpt
ADDED
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| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:95dd633d298b75d32dbdd27baf2474dc689b2ef0e652e2baf4e5c72d49e577fc
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| 3 |
+
size 1709452
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categorical_imn_100hz/norm_vs_mi/metrics.csv
ADDED
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+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
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| 2 |
+
0.9002650762094102,0.8833359353534816,0.8956262425447317,0.821330902461258,0.856871136471707,0.7822823773232199,0.9591270878839028
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categorical_imn_100hz/norm_vs_sttc/args.yaml
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accelerator: auto
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batch_size: 64
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ckpt: null
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+
devices: 1
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| 5 |
+
dropout: 0.2
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| 6 |
+
early_stop_min_delta: 0.0
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| 7 |
+
early_stop_mode: max
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| 8 |
+
early_stop_monitor: val_auc
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| 9 |
+
early_stop_patience: 10
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| 10 |
+
epochs: 100
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| 11 |
+
inference_only: false
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| 12 |
+
lambda_l1: 0.0001
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| 13 |
+
lr: 0.001
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| 14 |
+
n_neg_viz: 10
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| 15 |
+
n_pos_viz: 10
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| 16 |
+
num_workers: 2
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| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_100Hz
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| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
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| 19 |
+
sampling_rate: 100
|
| 20 |
+
scheduler: step
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| 21 |
+
scheduler_params: '{}'
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| 22 |
+
seed: 42
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| 23 |
+
stride: null
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| 24 |
+
task: norm_vs_sttc
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| 25 |
+
viz_pdf: viz_norm_vs_sttc_imn.pdf
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| 26 |
+
viz_random: true
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| 27 |
+
wandb_name: null
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| 28 |
+
wandb_offline: false
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| 29 |
+
wandb_project: mesormorphic_ecg
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| 30 |
+
weight_decay: 0.0001
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| 31 |
+
window: null
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categorical_imn_100hz/norm_vs_sttc/best-imn-epoch=18-val_auc=0.9748.ckpt
ADDED
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version https://git-lfs.github.com/spec/v1
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+
oid sha256:a3d1691f8defb68f9aa5b5941d7f693bb05223dca92ff421c29e14d4c780b278
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+
size 1709452
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categorical_imn_100hz/norm_vs_sttc/metrics.csv
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accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
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| 2 |
+
0.9233108108108108,0.9130421763710115,0.9028459273797841,0.8778625954198473,0.8901790033865506,0.8314748580551121,0.9748412497205275
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categorical_imn_500hz/norm_vs_cd/args.yaml
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accelerator: auto
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batch_size: 64
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ckpt: null
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devices: 1
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| 5 |
+
dropout: 0.2
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| 6 |
+
early_stop_min_delta: 0.0
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| 7 |
+
early_stop_mode: max
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| 8 |
+
early_stop_monitor: val_auc
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| 9 |
+
early_stop_patience: 10
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| 10 |
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epochs: 100
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| 11 |
+
inference_only: false
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| 12 |
+
lambda_l1: 0.0001
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| 13 |
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lr: 0.001
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| 14 |
+
n_neg_viz: 10
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| 15 |
+
n_pos_viz: 10
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| 16 |
+
num_workers: 2
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| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM
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| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
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| 19 |
+
sampling_rate: 500
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| 20 |
+
scheduler: step
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| 21 |
+
scheduler_params: '{}'
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| 22 |
+
seed: 42
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| 23 |
+
stride: null
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| 24 |
+
task: norm_vs_cd
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| 25 |
+
viz_pdf: viz_norm_vs_cd_imn.pdf
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| 26 |
+
viz_random: true
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| 27 |
+
wandb_name: null
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| 28 |
+
wandb_offline: false
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| 29 |
+
wandb_project: mesormorphic_ecg
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| 30 |
+
weight_decay: 0.0001
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| 31 |
+
window: null
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categorical_imn_500hz/norm_vs_cd/best-imn-epoch=21-val_auc=0.9505.ckpt
ADDED
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version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:ff11b8254c1c04d4e12e50223830e0dfab59648687575fa0c9013f6872cc443a
|
| 3 |
+
size 1709452
|
categorical_imn_500hz/norm_vs_cd/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
+
0.8949090909090909,0.8915511711814902,0.8162436548223351,0.881578947368421,0.8476541908276225,0.7689502200991402,0.9504771347574594
|
categorical_imn_500hz/norm_vs_hyp/args.yaml
ADDED
|
@@ -0,0 +1,31 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accelerator: auto
|
| 2 |
+
batch_size: 64
|
| 3 |
+
ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
+
dropout: 0.2
|
| 6 |
+
early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 500
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_hyp
|
| 25 |
+
viz_pdf: viz_norm_vs_hyp_imn.pdf
|
| 26 |
+
viz_random: true
|
| 27 |
+
wandb_name: null
|
| 28 |
+
wandb_offline: false
|
| 29 |
+
wandb_project: mesormorphic_ecg
|
| 30 |
+
weight_decay: 0.0001
|
| 31 |
+
window: null
|
categorical_imn_500hz/norm_vs_hyp/best-imn-epoch=11-val_auc=0.9030.ckpt
ADDED
|
@@ -0,0 +1,3 @@
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|
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|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:f64cfaeb97399dc6885b3f592ab661e9e57f1615a737b8e63185985f986ccbc3
|
| 3 |
+
size 1709452
|
categorical_imn_500hz/norm_vs_hyp/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
+
0.8664761126990609,0.828957600607978,0.6683168316831684,0.7627118644067796,0.712401055408971,0.6282644747563798,0.902993545143737
|
categorical_imn_500hz/norm_vs_mi/args.yaml
ADDED
|
@@ -0,0 +1,31 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
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|
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|
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|
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|
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|
|
|
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|
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|
|
|
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|
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|
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|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
| 1 |
+
accelerator: auto
|
| 2 |
+
batch_size: 64
|
| 3 |
+
ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
+
early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 500
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_mi
|
| 25 |
+
viz_pdf: viz_norm_vs_mi_imn.pdf
|
| 26 |
+
viz_random: true
|
| 27 |
+
wandb_name: null
|
| 28 |
+
wandb_offline: false
|
| 29 |
+
wandb_project: mesormorphic_ecg
|
| 30 |
+
weight_decay: 0.0001
|
| 31 |
+
window: null
|
categorical_imn_500hz/norm_vs_mi/best-imn-epoch=18-val_auc=0.9555.ckpt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:b98c2234e6989242bf531679548bfeb6cb565c98472cb1c1ab2ae8775d5e0000
|
| 3 |
+
size 1709452
|
categorical_imn_500hz/norm_vs_mi/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
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0.8933068257123923,0.8763059728937517,0.8832838773491593,0.8140382862351869,0.8472485768500949,0.7669884774232637,0.955509726256408
|
categorical_imn_500hz/norm_vs_sttc/args.yaml
ADDED
|
@@ -0,0 +1,31 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
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|
|
|
|
| 1 |
+
accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
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early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
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early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
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inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 500
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_sttc
|
| 25 |
+
viz_pdf: viz_norm_vs_sttc_imn.pdf
|
| 26 |
+
viz_random: true
|
| 27 |
+
wandb_name: null
|
| 28 |
+
wandb_offline: false
|
| 29 |
+
wandb_project: mesormorphic_ecg
|
| 30 |
+
weight_decay: 0.0001
|
| 31 |
+
window: null
|
categorical_imn_500hz/norm_vs_sttc/best-imn-epoch=20-val_auc=0.9589.ckpt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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|
| 3 |
+
size 1709452
|
categorical_imn_500hz/norm_vs_sttc/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
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0.893581081081081,0.8878736944648504,0.8371665133394665,0.8683206106870229,0.8524590163934427,0.7695932449188786,0.9588726484397457
|
single_linear_imn_100hz/norm_vs_cd/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
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|
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|
|
|
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|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
| 1 |
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accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
+
early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_100Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 100
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_cd
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_cd_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
+
wandb_name: null
|
| 29 |
+
wandb_offline: false
|
| 30 |
+
wandb_project: mesormorphic_ecg
|
| 31 |
+
weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_100hz/norm_vs_cd/best-imn-epoch=16-val_auc=0.9697.ckpt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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|
| 3 |
+
size 1707020
|
single_linear_imn_100hz/norm_vs_cd/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
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|
single_linear_imn_100hz/norm_vs_hyp/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
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|
|
| 1 |
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accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
+
early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_100Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 100
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_hyp
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_hyp_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
+
wandb_name: null
|
| 29 |
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wandb_offline: false
|
| 30 |
+
wandb_project: mesormorphic_ecg
|
| 31 |
+
weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_100hz/norm_vs_hyp/best-imn-epoch=11-val_auc=0.9320.ckpt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:853683c9289b3f868b62ad6191c35e7c752884f4dc868b7bc19284645eb4947b
|
| 3 |
+
size 1707020
|
single_linear_imn_100hz/norm_vs_hyp/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
+
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|
single_linear_imn_100hz/norm_vs_mi/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
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|
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|
|
|
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
+
early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_100Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 100
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_mi
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_mi_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
+
wandb_name: null
|
| 29 |
+
wandb_offline: false
|
| 30 |
+
wandb_project: mesormorphic_ecg
|
| 31 |
+
weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_100hz/norm_vs_mi/best-imn-epoch=31-val_auc=0.9631.ckpt
ADDED
|
@@ -0,0 +1,3 @@
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|
|
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 3 |
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size 1707020
|
single_linear_imn_100hz/norm_vs_mi/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
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0.904572564612326,0.8912162601425401,0.8893166506256015,0.8422971741112124,0.8651685393258427,0.7921058451960862,0.9630657080476449
|
single_linear_imn_100hz/norm_vs_sttc/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
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|
|
|
|
| 1 |
+
accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
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| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
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early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_100Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 100
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_sttc
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_sttc_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
+
wandb_name: null
|
| 29 |
+
wandb_offline: false
|
| 30 |
+
wandb_project: mesormorphic_ecg
|
| 31 |
+
weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_100hz/norm_vs_sttc/best-imn-epoch=24-val_auc=0.9757.ckpt
ADDED
|
@@ -0,0 +1,3 @@
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|
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|
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 3 |
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size 1707020
|
single_linear_imn_100hz/norm_vs_sttc/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
+
0.922972972972973,0.9198952377910505,0.8775322283609577,0.9093511450381679,0.8931583880037488,0.8332893364153079,0.9757325669136669
|
single_linear_imn_500hz/norm_vs_cd/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
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|
| 1 |
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accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
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| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
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early_stop_min_delta: 0.0
|
| 7 |
+
early_stop_mode: max
|
| 8 |
+
early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
+
epochs: 100
|
| 11 |
+
inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_500Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 500
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_cd
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_cd_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
+
wandb_name: null
|
| 29 |
+
wandb_offline: false
|
| 30 |
+
wandb_project: mesormorphic_ecg
|
| 31 |
+
weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_500hz/norm_vs_cd/best-imn-epoch=21-val_auc=0.9494.ckpt
ADDED
|
@@ -0,0 +1,3 @@
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|
|
|
|
|
|
|
|
|
|
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|
| 1 |
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version https://git-lfs.github.com/spec/v1
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| 3 |
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size 1707020
|
single_linear_imn_500hz/norm_vs_cd/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
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|
single_linear_imn_500hz/norm_vs_hyp/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
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|
|
|
|
|
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| 1 |
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accelerator: auto
|
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batch_size: 64
|
| 3 |
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ckpt: null
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devices: 1
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| 5 |
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dropout: 0.2
|
| 6 |
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|
| 7 |
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early_stop_mode: max
|
| 8 |
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early_stop_monitor: val_auc
|
| 9 |
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early_stop_patience: 10
|
| 10 |
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epochs: 100
|
| 11 |
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inference_only: false
|
| 12 |
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lambda_l1: 0.0001
|
| 13 |
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lr: 0.001
|
| 14 |
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n_neg_viz: 10
|
| 15 |
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n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_500Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
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sampling_rate: 500
|
| 20 |
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scheduler: step
|
| 21 |
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scheduler_params: '{}'
|
| 22 |
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seed: 42
|
| 23 |
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stride: null
|
| 24 |
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task: norm_vs_hyp
|
| 25 |
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viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_hyp_imn.pdf
|
| 27 |
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viz_random: true
|
| 28 |
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wandb_name: null
|
| 29 |
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wandb_offline: false
|
| 30 |
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wandb_project: mesormorphic_ecg
|
| 31 |
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weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_500hz/norm_vs_hyp/best-imn-epoch=22-val_auc=0.9011.ckpt
ADDED
|
@@ -0,0 +1,3 @@
|
|
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|
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|
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|
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 3 |
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size 1707020
|
single_linear_imn_500hz/norm_vs_hyp/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
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|
single_linear_imn_500hz/norm_vs_mi/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
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accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
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early_stop_min_delta: 0.0
|
| 7 |
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early_stop_mode: max
|
| 8 |
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early_stop_monitor: val_auc
|
| 9 |
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early_stop_patience: 10
|
| 10 |
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epochs: 100
|
| 11 |
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inference_only: false
|
| 12 |
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lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_500Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 500
|
| 20 |
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scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
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stride: null
|
| 24 |
+
task: norm_vs_mi
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_mi_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
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wandb_name: null
|
| 29 |
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wandb_offline: false
|
| 30 |
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wandb_project: mesormorphic_ecg
|
| 31 |
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weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_500hz/norm_vs_mi/best-imn-epoch=14-val_auc=0.9507.ckpt
ADDED
|
@@ -0,0 +1,3 @@
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|
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|
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|
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|
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 3 |
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size 1707020
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single_linear_imn_500hz/norm_vs_mi/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
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|
single_linear_imn_500hz/norm_vs_sttc/args.yaml
ADDED
|
@@ -0,0 +1,32 @@
|
|
|
|
|
|
|
|
|
|
|
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|
|
| 1 |
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accelerator: auto
|
| 2 |
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batch_size: 64
|
| 3 |
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ckpt: null
|
| 4 |
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devices: 1
|
| 5 |
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dropout: 0.2
|
| 6 |
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early_stop_min_delta: 0.0
|
| 7 |
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early_stop_mode: max
|
| 8 |
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early_stop_monitor: val_auc
|
| 9 |
+
early_stop_patience: 10
|
| 10 |
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epochs: 100
|
| 11 |
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inference_only: false
|
| 12 |
+
lambda_l1: 0.0001
|
| 13 |
+
lr: 0.001
|
| 14 |
+
n_neg_viz: 10
|
| 15 |
+
n_pos_viz: 10
|
| 16 |
+
num_workers: 2
|
| 17 |
+
out_dir: runs/imn_ecg_transition_net_GM_one_linear_500Hz
|
| 18 |
+
path: /work/vajira/DATA/EXG_PTB_XL/physionet/files/ptb-xl/1_0_1
|
| 19 |
+
sampling_rate: 500
|
| 20 |
+
scheduler: step
|
| 21 |
+
scheduler_params: '{}'
|
| 22 |
+
seed: 42
|
| 23 |
+
stride: null
|
| 24 |
+
task: norm_vs_sttc
|
| 25 |
+
viz_negative_class: false
|
| 26 |
+
viz_pdf: viz_norm_vs_sttc_imn.pdf
|
| 27 |
+
viz_random: true
|
| 28 |
+
wandb_name: null
|
| 29 |
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wandb_offline: false
|
| 30 |
+
wandb_project: mesormorphic_ecg
|
| 31 |
+
weight_decay: 0.0001
|
| 32 |
+
window: null
|
single_linear_imn_500hz/norm_vs_sttc/best-imn-epoch=20-val_auc=0.9543.ckpt
ADDED
|
@@ -0,0 +1,3 @@
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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| 3 |
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size 1707020
|
single_linear_imn_500hz/norm_vs_sttc/metrics.csv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
accuracy,balanced_accuracy,precision,recall,f1_score,mcc,auroc
|
| 2 |
+
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