Upload TriageBERT ESI model (recall optimized)
Browse files- README.md +86 -0
- config.json +39 -0
- model.safetensors +3 -0
- special_tokens_map.json +7 -0
- tokenizer.json +0 -0
- tokenizer_config.json +58 -0
- vocab.txt +0 -0
README.md
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---
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license: apache-2.0
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language:
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- en
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tags:
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- medical
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- triage
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- classification
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- emergency
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- esi
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pipeline_tag: text-classification
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---
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# TriageBERT - ESI Triage Classification Model
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A BERT-based model fine-tuned for Emergency Severity Index (ESI) classification on PubMedBERT.
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## Model Description
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This model classifies emergency medical text into 5 ESI levels:
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- **ESI 1**: Immediate (life-threatening)
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- **ESI 2**: Emergent (high risk)
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- **ESI 3**: Urgent (stable but needs multiple resources)
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- **ESI 4**: Less Urgent (single resource needed)
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- **ESI 5**: Non-Urgent (no resources needed)
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## Training
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- **Base Model**: PubMedBERT (biomedical domain)
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- **Training Data**: MIMIC-IV ED-Triage data + synthetic data
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- **Optimization**: Recall-optimized for critical cases (ESI 1-2)
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## Usage
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```python
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from transformers import AutoTokenizer, AutoModelForSequenceClassification
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import torch
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# Load model
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tokenizer = AutoTokenizer.from_pretrained("SHUB-8/Triage-BERT")
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model = AutoModelForSequenceClassification.from_pretrained("SHUB-8/Triage-BERT")
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# Predict
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text = "Patient has chest pain and difficulty breathing"
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inputs = tokenizer(text, return_tensors="pt", truncation=True, max_length=128)
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with torch.no_grad():
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outputs = model(**inputs)
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probs = torch.softmax(outputs.logits, dim=1)
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esi_level = torch.argmax(probs).item() + 1 # ESI 1-5
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print(f"ESI Level: {esi_level}")
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```
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## Performance
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| Metric | Value |
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|--------|-------|
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| Accuracy | ~85% |
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| Recall (ESI 1-2) | ~92% |
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| F1 Score | ~83% |
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## Intended Use
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- Emergency department triage assistance
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- Medical emergency prioritization
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- Healthcare AI research
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## Limitations
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- English language only
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- Should be used as decision support, not replacement for clinical judgment
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- Performance may vary on out-of-distribution data
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## Citation
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If you use this model, please cite:
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```
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@misc{triage-bert-esi,
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author = {Your Name},
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title = {TriageBERT: ESI Triage Classification Model},
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year = {2024},
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publisher = {Hugging Face},
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url = {https://huggingface.co/SHUB-8/triage-bert-esi-recall-optimized}
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}
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```
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config.json
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{
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"architectures": [
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"BertForSequenceClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"dtype": "float32",
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "LABEL_0",
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"1": "LABEL_1",
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"2": "LABEL_2",
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"3": "LABEL_3",
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"4": "LABEL_4"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"LABEL_0": 0,
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"LABEL_1": 1,
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"LABEL_2": 2,
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"LABEL_3": 3,
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"LABEL_4": 4
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"problem_type": "single_label_classification",
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"transformers_version": "4.57.3",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 30522
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}
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:1c100e7ddcb769e78f5af52eafe4d20b9bee3dd5066eb46a358d2b7867dfdef7
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size 437967876
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special_tokens_map.json
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{
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"cls_token": "[CLS]",
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"mask_token": "[MASK]",
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"unk_token": "[UNK]"
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}
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tokenizer.json
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tokenizer_config.json
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{
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"added_tokens_decoder": {
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"0": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"1": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"2": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"3": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"4": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"clean_up_tokenization_spaces": true,
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"cls_token": "[CLS]",
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"do_basic_tokenize": true,
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"do_lower_case": true,
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"extra_special_tokens": {},
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"mask_token": "[MASK]",
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"model_max_length": 1000000000000000019884624838656,
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"never_split": null,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"unk_token": "[UNK]"
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}
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vocab.txt
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