SNUH-ORACLE-IPF

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ORACLE-IPF

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ORACLE-IPF Research 2

• "torch._utils._rebuild_parameter",
• "torch.optim.lr_scheduler.OneCycleLR",
• "pandas.core.indexes.base._new_Index",
• "sybil.augmentations.ComposeAug",
• "pandas._libs.internals._unpickle_block",
• "albumentations.augmentations.geometric.resize.Resize",
• "torchio.transforms.preprocessing.spatial.crop_or_pad.CropOrPad",
• "collections.OrderedDict",
• "argparse.Namespace",
• "sybil.augmentations.Normalize_Tensor_2d",
• "torch.utils.data.dataloader.DataLoader",
• "torch.utils.data.sampler.BatchSampler",
• "sybil.augmentations.Rotate_Range",
• "__builtin__.set",
• "albumentations.pytorch.transforms.ToTensorV2",
• "sybil.augmentations.Force_Num_Chan_Tensor_2d",
• "torch.LongStorage",
• "albumentations.augmentations.geometric.rotate.Rotate",
• "mlflow.tracking._tracking_service.client.TrackingServiceClient",
• "sybil.datasets.snuh_h5.RandomCrop",
• "pytorch_lightning.loggers.tensorboard.TensorBoardLogger",
• "torch.FloatStorage",
• "numpy.ndarray",
• "torch.optim.adamw.AdamW",
• "torchvision.transforms.transforms.Normalize",
• "__builtin__.dict",
• "sybil.datasets.snuh_h5.SNUH_Survival_Dataset",
• "functools.partial",
• "sybil.augmentations.ToTensor",
• "pandas.core.indexes.base.Index",
• "fsspec.implementations.local.LocalFileSystem",
• "pytorch_lightning.loggers.mlflow.MLFlowLogger",
• "collections.defaultdict",
• "torch._utils._rebuild_tensor_v2",
• "mlflow.tracking.client.MlflowClient",
• "numpy.core.multiarray._reconstruct",
• "numpy.mean",
• "sybil.utils.sampler.DistributedWeightedSampler",
• "pytorch_lightning.utilities.auto_restart._capture_metadata_collate",
• "sybil.augmentations.Scale_2d",
• "fsspec.spec.make_instance",
• "numpy.dtype",
• "_codecs.encode",
• "pandas.core.internals.managers.BlockManager",
• "numpy.core.multiarray.scalar",
• "__builtin__.getattr",
• "pandas.core.frame.DataFrame",
• "sybil.loaders.image_loaders.OpenCVLoader",
• "sybil.utils.loading.ignore_None_collate"

How to fix it?

• "pandas.core.indexes.base._new_Index",
• "sybil.augmentations.ComposeAug",
• "pandas._libs.internals._unpickle_block",
• "albumentations.augmentations.geometric.resize.Resize",
• "torchio.transforms.preprocessing.spatial.crop_or_pad.CropOrPad",
• "collections.OrderedDict",
• "argparse.Namespace",
• "sybil.augmentations.Normalize_Tensor_2d",
• "torch.utils.data.dataloader.DataLoader",
• "torch.utils.data.sampler.BatchSampler",
• "sybil.augmentations.Rotate_Range",
• "__builtin__.set",
• "albumentations.pytorch.transforms.ToTensorV2",
• "sybil.augmentations.Force_Num_Chan_Tensor_2d",
• "torch.LongStorage",
• "albumentations.augmentations.geometric.rotate.Rotate",
• "mlflow.tracking._tracking_service.client.TrackingServiceClient",
• "sybil.datasets.snuh_h5.RandomCrop",
• "pytorch_lightning.loggers.tensorboard.TensorBoardLogger",
• "torch.FloatStorage",
• "numpy.ndarray",
• "torchvision.transforms.transforms.Normalize",
• "functools.partial",
• "sybil.datasets.snuh_h5.SNUH_Survival_Dataset",
• "sybil.augmentations.ToTensor",
• "pandas.core.indexes.base.Index",
• "fsspec.implementations.local.LocalFileSystem",
• "pytorch_lightning.loggers.mlflow.MLFlowLogger",
• "torch._utils._rebuild_tensor_v2",
• "mlflow.tracking.client.MlflowClient",
• "numpy.core.multiarray._reconstruct",
• "numpy.mean",
• "sybil.utils.sampler.DistributedWeightedSampler",
• "pytorch_lightning.utilities.auto_restart._capture_metadata_collate",
• "sybil.augmentations.Scale_2d",
• "fsspec.spec.make_instance",
• "numpy.dtype",
• "_codecs.encode",
• "pandas.core.internals.managers.BlockManager",
• "numpy.core.multiarray.scalar",
• "__builtin__.getattr",
• "pandas.core.frame.DataFrame",
• "sybil.loaders.image_loaders.OpenCVLoader",
• "sybil.utils.loading.ignore_None_collate"

How to fix it?

• "pandas.core.indexes.base._new_Index",
• "sybil.augmentations.ComposeAug",
• "pandas._libs.internals._unpickle_block",
• "albumentations.augmentations.geometric.resize.Resize",
• "torchio.transforms.preprocessing.spatial.crop_or_pad.CropOrPad",
• "collections.OrderedDict",
• "argparse.Namespace",
• "sybil.augmentations.Normalize_Tensor_2d",
• "torch.utils.data.dataloader.DataLoader",
• "torch.utils.data.sampler.BatchSampler",
• "sybil.augmentations.Rotate_Range",
• "__builtin__.set",
• "albumentations.pytorch.transforms.ToTensorV2",
• "sybil.augmentations.Force_Num_Chan_Tensor_2d",
• "torch.LongStorage",
• "albumentations.augmentations.geometric.rotate.Rotate",
• "mlflow.tracking._tracking_service.client.TrackingServiceClient",
• "sybil.datasets.snuh_h5.RandomCrop",
• "pytorch_lightning.loggers.tensorboard.TensorBoardLogger",
• "torch.FloatStorage",
• "numpy.ndarray",
• "torchvision.transforms.transforms.Normalize",
• "functools.partial",
• "sybil.datasets.snuh_h5.SNUH_Survival_Dataset",
• "sybil.augmentations.ToTensor",
• "pandas.core.indexes.base.Index",
• "fsspec.implementations.local.LocalFileSystem",
• "pytorch_lightning.loggers.mlflow.MLFlowLogger",
• "torch._utils._rebuild_tensor_v2",
• "mlflow.tracking.client.MlflowClient",
• "numpy.core.multiarray._reconstruct",
• "numpy.mean",
• "sybil.utils.sampler.DistributedWeightedSampler",
• "pytorch_lightning.utilities.auto_restart._capture_metadata_collate",
• "sybil.augmentations.Scale_2d",
• "fsspec.spec.make_instance",
• "numpy.dtype",
• "_codecs.encode",
• "pandas.core.internals.managers.BlockManager",
• "numpy.core.multiarray.scalar",
• "__builtin__.getattr",
• "pandas.core.frame.DataFrame",
• "sybil.loaders.image_loaders.OpenCVLoader",
• "sybil.utils.loading.ignore_None_collate"

How to fix it?

• "pandas.core.indexes.base._new_Index",
• "sybil.augmentations.ComposeAug",
• "pandas._libs.internals._unpickle_block",
• "albumentations.augmentations.geometric.resize.Resize",
• "torchio.transforms.preprocessing.spatial.crop_or_pad.CropOrPad",
• "collections.OrderedDict",
• "argparse.Namespace",
• "sybil.augmentations.Normalize_Tensor_2d",
• "torch.utils.data.dataloader.DataLoader",
• "torch.utils.data.sampler.BatchSampler",
• "sybil.augmentations.Rotate_Range",
• "__builtin__.set",
• "albumentations.pytorch.transforms.ToTensorV2",
• "sybil.augmentations.Force_Num_Chan_Tensor_2d",
• "torch.LongStorage",
• "albumentations.augmentations.geometric.rotate.Rotate",
• "mlflow.tracking._tracking_service.client.TrackingServiceClient",
• "sybil.datasets.snuh_h5.RandomCrop",
• "pytorch_lightning.loggers.tensorboard.TensorBoardLogger",
• "torch.FloatStorage",
• "numpy.ndarray",
• "torchvision.transforms.transforms.Normalize",
• "functools.partial",
• "sybil.datasets.snuh_h5.SNUH_Survival_Dataset",
• "sybil.augmentations.ToTensor",
• "pandas.core.indexes.base.Index",
• "fsspec.implementations.local.LocalFileSystem",
• "pytorch_lightning.loggers.mlflow.MLFlowLogger",
• "torch._utils._rebuild_tensor_v2",
• "mlflow.tracking.client.MlflowClient",
• "numpy.core.multiarray._reconstruct",
• "numpy.mean",
• "sybil.utils.sampler.DistributedWeightedSampler",
• "pytorch_lightning.utilities.auto_restart._capture_metadata_collate",
• "sybil.augmentations.Scale_2d",
• "fsspec.spec.make_instance",
• "numpy.dtype",
• "_codecs.encode",
• "pandas.core.internals.managers.BlockManager",
• "numpy.core.multiarray.scalar",
• "__builtin__.getattr",
• "pandas.core.frame.DataFrame",
• "sybil.loaders.image_loaders.OpenCVLoader",
• "sybil.utils.loading.ignore_None_collate"

How to fix it?

• "torch._utils._rebuild_parameter",
• "torch.optim.lr_scheduler.OneCycleLR",
• "pandas.core.indexes.base._new_Index",
• "sybil.augmentations.ComposeAug",
• "pandas._libs.internals._unpickle_block",
• "albumentations.augmentations.geometric.resize.Resize",
• "torchio.transforms.preprocessing.spatial.crop_or_pad.CropOrPad",
• "collections.OrderedDict",
• "argparse.Namespace",
• "sybil.augmentations.Normalize_Tensor_2d",
• "torch.utils.data.dataloader.DataLoader",
• "torch.utils.data.sampler.BatchSampler",
• "sybil.augmentations.Rotate_Range",
• "__builtin__.set",
• "albumentations.pytorch.transforms.ToTensorV2",
• "sybil.augmentations.Force_Num_Chan_Tensor_2d",
• "torch.LongStorage",
• "albumentations.augmentations.geometric.rotate.Rotate",
• "mlflow.tracking._tracking_service.client.TrackingServiceClient",
• "sybil.datasets.snuh_h5.RandomCrop",
• "pytorch_lightning.loggers.tensorboard.TensorBoardLogger",
• "torch.FloatStorage",
• "numpy.ndarray",
• "torch.optim.adamw.AdamW",
• "torchvision.transforms.transforms.Normalize",
• "__builtin__.dict",
• "sybil.datasets.snuh_h5.SNUH_Survival_Dataset",
• "functools.partial",
• "sybil.augmentations.ToTensor",
• "pandas.core.indexes.base.Index",
• "fsspec.implementations.local.LocalFileSystem",
• "pytorch_lightning.loggers.mlflow.MLFlowLogger",
• "collections.defaultdict",
• "torch._utils._rebuild_tensor_v2",
• "mlflow.tracking.client.MlflowClient",
• "numpy.core.multiarray._reconstruct",
• "numpy.mean",
• "sybil.utils.sampler.DistributedWeightedSampler",
• "pytorch_lightning.utilities.auto_restart._capture_metadata_collate",
• "sybil.augmentations.Scale_2d",
• "fsspec.spec.make_instance",
• "numpy.dtype",
• "_codecs.encode",
• "pandas.core.internals.managers.BlockManager",
• "numpy.core.multiarray.scalar",
• "__builtin__.getattr",
• "pandas.core.frame.DataFrame",
• "sybil.loaders.image_loaders.OpenCVLoader",
• "sybil.utils.loading.ignore_None_collate"

How to fix it?