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Upload 0_token_base_1's state dict

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+ 0_token_base_1/logs/0_token_base_1_log_plot.jpg filter=lfs diff=lfs merge=lfs -text
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1
+ # %% [code]
2
+ get_ipython().system('pip install evaluate seqeval underthesea positional-encodings[pytorch]')
3
+
4
+ # %% [code]
5
+ import warnings
6
+ warnings.filterwarnings('ignore')
7
+
8
+ import torch
9
+ import torch.nn as nn
10
+ import torch.optim as optim
11
+ from torch.utils.data import Dataset, TensorDataset, DataLoader
12
+ import torch.nn.functional as F
13
+ import albumentations as albu
14
+ from transformers import AutoTokenizer, AutoModel
15
+ import torch.distributed as dist
16
+ from torch.nn.parallel import DistributedDataParallel as DDP
17
+ from positional_encodings.torch_encodings import PositionalEncoding1D
18
+
19
+ from sklearn.metrics import f1_score
20
+ from sklearn.preprocessing import MinMaxScaler, StandardScaler
21
+ from scipy.spatial.transform import Rotation as R
22
+ from sklearn.model_selection import KFold, StratifiedGroupKFold, GroupKFold, StratifiedKFold
23
+ from sklearn.metrics import precision_recall_fscore_support
24
+ from timm.utils import ModelEmaV3
25
+ import timm
26
+
27
+ import os
28
+ import gc
29
+ import json
30
+ from pathlib import Path
31
+ import pickle
32
+ from tqdm.auto import tqdm
33
+ import copy
34
+ import numpy as np
35
+ import pandas as pd
36
+ import polars as pl
37
+ from PIL import Image
38
+ import time
39
+ from tqdm import tqdm
40
+ from matplotlib import pyplot as plt
41
+ import seaborn as sns
42
+ from multiprocessing import Manager as MemoryManager
43
+ from functools import lru_cache
44
+ import shutil
45
+ import glob
46
+ import cv2
47
+ import random
48
+ import re
49
+ import joblib
50
+ import math
51
+ from huggingface_hub import HfApi, snapshot_download
52
+ import evaluate
53
+ from underthesea import word_tokenize as vi_tokenize_tool
54
+ import spacy
55
+ en_tokenize_tool = spacy.load("en_core_web_sm")
56
+ from collections import defaultdict, Counter
57
+
58
+ # %% [code]
59
+ # Global config
60
+ SEEDS = [26092004]
61
+ topk = 1
62
+ nfolds = 5
63
+ only_fold_idx = 0
64
+ test_only = 0
65
+ debug_only = 0
66
+
67
+ # Config thư mục
68
+ dataset = 'kltn/only_entities' # conll003, ontonotes, phoner, vietbio, vietmed, vimed, kltn/only_entities, kltn/raw
69
+ root_dir = f'/kaggle/input/notebooks/sambui22022517/kltn-data/{dataset}' ## Thư mục chứa file train, val, test
70
+ train_dir = f'{root_dir}'
71
+ # val_dir = f'{root_dir}/val'
72
+ test_dir = f'{root_dir}'
73
+
74
+ # Config checkpoints
75
+
76
+ # Config training
77
+ epochs = 18 if not debug_only else 2
78
+ batch_size = 16
79
+ device = "cuda" if torch.cuda.is_available() else "cpu"
80
+ # # Thêm biến toàn cục nào đó vào đây
81
+ repo_name = 'SS3M/kltn-experiments'
82
+ state_dict_save_name = "0_token_base_1"
83
+ checkpoints_dir = state_dict_save_name
84
+ pretrained_dir = "/kaggle/working"
85
+ os.makedirs(f'{checkpoints_dir}', exist_ok=True)
86
+
87
+ backbone_model_name = "bert-base-uncased" if dataset in ["conll003", "ontonotes"] else "vinai/phobert-base"
88
+ word_tokenize = lambda text: [token.text for token in en_tokenize_tool(text)] if dataset == dataset in ["conll003", "ontonotes"] else vi_tokenize_tool(text)
89
+ max_len_dict = {
90
+ 'kltn/raw': 256,
91
+ 'kltn/only_entities': 68,
92
+ 'conll003': 46,
93
+ 'ontonotes': 61,
94
+ 'phoner': 68,
95
+ 'vietbio': 125,
96
+ 'vietmed': 36,
97
+ 'vimed': 100,
98
+ }
99
+ zero_entities_rate_dict = {
100
+ 'kltn/raw': 1000,
101
+ 'kltn/only_entities': 0.2,
102
+ 'conll003': 1000, # mean keep all zero-entities samples
103
+ 'ontonotes': 1000,
104
+ 'phoner': 1000,
105
+ 'vietbio': 1000,
106
+ 'vietmed': 1000,
107
+ 'vimed': 1000,
108
+ }
109
+
110
+ max_len = max_len_dict[dataset]
111
+ max_n_parts = 1
112
+ max_span_len = 10
113
+ zero_entities_rate = zero_entities_rate_dict[dataset]
114
+
115
+ # Trainer
116
+ trainer_params = {
117
+ "training_time": "00:11:30:00",
118
+ "eval_mode": "max",
119
+ "topk": topk,
120
+ "save_name": state_dict_save_name,
121
+ "save_best": True,
122
+ "save_last": True,
123
+ "device": device,
124
+ "logging": True,
125
+ "logging_file": True,
126
+ "checkpoints_dir": checkpoints_dir,
127
+ "early_stopping": 30,
128
+ "eval_from_ratio": 0.4,
129
+ "eval_every": 1,
130
+ "schedule_in_step": False,
131
+ "use_ema": True,
132
+ "ema_from_ratio": 0.3,
133
+ "ema_decay": 0.9995,
134
+ "max_grad_norm": 200.0,
135
+ "return_best": True,
136
+ "return_last": True,
137
+ }
138
+
139
+ # Memory
140
+ train_memory_params = {
141
+ 'max_len': max_len,
142
+ 'max_n_parts': max_n_parts,
143
+ }
144
+ val_memory_params = {
145
+ 'max_len': max_len,
146
+ 'max_n_parts': max_n_parts,
147
+ }
148
+
149
+ # Data Loader
150
+ def seed_worker(worker_id):
151
+ worker_seed = torch.initial_seed() % 2**32
152
+ np.random.seed(worker_seed)
153
+ random.seed(worker_seed)
154
+
155
+ train_loader_params = {
156
+ 'batch_size': batch_size,
157
+ 'shuffle': True,
158
+ 'pin_memory':True,
159
+ 'num_workers': 2,
160
+ 'drop_last': False,
161
+ 'worker_init_fn': seed_worker,
162
+ 'persistent_workers': False,
163
+ }
164
+ val_loader_params = {
165
+ 'batch_size': batch_size,
166
+ 'shuffle': False,
167
+ 'pin_memory':True,
168
+ 'num_workers': 1,
169
+ 'drop_last': False,
170
+ 'worker_init_fn': seed_worker,
171
+ 'persistent_workers': False,
172
+ }
173
+
174
+ # Model
175
+ model_params = {
176
+ 'backbone_model_name': backbone_model_name,
177
+ }
178
+
179
+ # Loss Func
180
+ loss_func_params = {
181
+ 'lambda_ce': 1.0,
182
+ }
183
+ eval_func_params = {}
184
+
185
+ # Optim
186
+ optim_params = {
187
+ 'name': 'AdamW',
188
+ 'lr': 1e-4,
189
+ 'weight_decay': 1e-4,
190
+ }
191
+ scheduler_params = {
192
+ 'name': 'CosineAnnealingLR',
193
+ 'T_max': 20, # Số epoch để hoàn thành một chu kỳ giảm LR
194
+ 'eta_min': 1e-6 # Learning rate nhỏ nhất trong chu kỳ
195
+ }
196
+
197
+ # %% [code]
198
+ def set_seed(seed=42):
199
+ random.seed(seed)
200
+ np.random.seed(seed)
201
+ torch.manual_seed(seed)
202
+ torch.cuda.manual_seed(seed)
203
+ torch.cuda.manual_seed_all(seed) # if using multi-GPU
204
+ torch.use_deterministic_algorithms(False)
205
+ torch.backends.cudnn.deterministic = True
206
+ torch.backends.cudnn.benchmark = False
207
+ os.environ['PYTHONHASHSEED'] = str(seed)
208
+
209
+ # %% [code]
210
+ class CustomLoss(nn.Module):
211
+ def __init__(self, lambda_ce=1.0):
212
+ super().__init__()
213
+ self.lambda_ce = lambda_ce
214
+ self.ce = nn.CrossEntropyLoss(ignore_index=-100)
215
+
216
+ def forward(
217
+ self,
218
+ logits, labels,
219
+ ):
220
+ device = logits.device
221
+
222
+ # ===== TRG CE =====
223
+ B, L, C = logits.shape
224
+ logits_flat = logits.view(B * L, C)
225
+ labels_flat = labels.view(-1)
226
+
227
+ loss = self.ce(logits_flat, labels_flat) # (B*N,)
228
+
229
+ return {
230
+ "total": loss,
231
+ "ce_loss": loss,
232
+ }
233
+
234
+ # %% [code]
235
+ ## Viết eval_fn vào đây
236
+
237
+ # Bỏ hết eval_fn và trọng số vào đây
238
+ class CustomEvalFn(nn.Module):
239
+ def __init__(self):
240
+ super().__init__()
241
+
242
+ def compute_f1(self, tp, fp, fn):
243
+ precision = tp / (tp + fp + 1e-8)
244
+ recall = tp / (tp + fn + 1e-8)
245
+ f1 = 2 * precision * recall / (precision + recall + 1e-8)
246
+ return precision, recall, f1
247
+
248
+ def forward(self, pred, gold):
249
+ pred_set = set(pred)
250
+ gold_set = set(gold)
251
+
252
+ tp = len(pred_set & gold_set)
253
+ fp = len(pred_set - gold_set)
254
+ fn = len(gold_set - pred_set)
255
+
256
+ precision, recall, f1 = self.compute_f1(tp, fp, fn)
257
+
258
+ return {
259
+ f"precision": precision,
260
+ f"recall": recall,
261
+ f"f1": f1,
262
+ }
263
+
264
+ class SpanErrorAnalyzer:
265
+ def __init__(self, pad_token_id=0):
266
+ self.pad_token_id = pad_token_id
267
+
268
+ # ===== helper =====
269
+ def _to_set(self, data):
270
+ """
271
+ data: list of (b, tuple(ids))
272
+ -> dict[b] = set(tuple(ids))
273
+ """
274
+ res = defaultdict(set)
275
+ for b, ids in data:
276
+ ids = tuple([i for i in ids if i != self.pad_token_id])
277
+ if len(ids) > 0:
278
+ res[b].add(ids)
279
+ return res
280
+
281
+ def _iou(self, a, b):
282
+ """
283
+ a, b: tuple(ids)
284
+ """
285
+ set_a, set_b = set(a), set(b)
286
+ inter = len(set_a & set_b)
287
+ union = len(set_a | set_b)
288
+ if union == 0:
289
+ return 0.0
290
+ return inter / union
291
+
292
+ def _boundary_error(self, pred, gold):
293
+ """
294
+ đo lệch boundary dựa trên overlap prefix/suffix
295
+ """
296
+ # left match
297
+ left = 0
298
+ for i in range(min(len(pred), len(gold))):
299
+ if pred[i] == gold[i]:
300
+ left += 1
301
+ else:
302
+ break
303
+
304
+ # right match
305
+ right = 0
306
+ for i in range(1, min(len(pred), len(gold)) + 1):
307
+ if pred[-i] == gold[-i]:
308
+ right += 1
309
+ else:
310
+ break
311
+
312
+ return {
313
+ "left_match": left,
314
+ "right_match": right,
315
+ "pred_len": len(pred),
316
+ "gold_len": len(gold),
317
+ }
318
+
319
+ # ===== main =====
320
+ def analyze(self, preds, golds):
321
+ pred_map = self._to_set(preds)
322
+ gold_map = self._to_set(golds)
323
+
324
+ all_batches = set(pred_map.keys()) | set(gold_map.keys())
325
+
326
+ stats = Counter()
327
+
328
+ detailed_errors = []
329
+
330
+ for b in all_batches:
331
+ pset = pred_map.get(b, set())
332
+ gset = gold_map.get(b, set())
333
+
334
+ matched_gold = set()
335
+
336
+ # ===== check predictions =====
337
+ for p in pset:
338
+ if p in gset:
339
+ stats["exact_match"] += 1
340
+ matched_gold.add(p)
341
+ else:
342
+ # tìm gold gần nhất
343
+ best_iou = 0
344
+ best_g = None
345
+
346
+ for g in gset:
347
+ iou = self._iou(p, g)
348
+ if iou > best_iou:
349
+ best_iou = iou
350
+ best_g = g
351
+
352
+ if best_iou > 0:
353
+ stats["partial_match"] += 1
354
+
355
+ boundary = self._boundary_error(p, best_g)
356
+
357
+ detailed_errors.append({
358
+ "type": "boundary_error",
359
+ "batch": b,
360
+ "pred": p,
361
+ "gold": best_g,
362
+ "iou": best_iou,
363
+ **boundary
364
+ })
365
+ else:
366
+ if b not in gold_map:
367
+ stats["no_event_sample"] += 1
368
+ err_type = "no_event_sample"
369
+ else:
370
+ stats["completely_wrong"] += 1
371
+ err_type = "completely_wrong"
372
+
373
+ detailed_errors.append({
374
+ "type": err_type,
375
+ "batch": b,
376
+ "pred": p
377
+ })
378
+
379
+ # ===== check missing =====
380
+ for g in gset:
381
+ if g not in matched_gold:
382
+ # check if any pred overlaps
383
+ overlap = any(self._iou(p, g) > 0 for p in pset)
384
+
385
+ if overlap:
386
+ stats["miss_with_overlap"] += 1
387
+ else:
388
+ stats["miss"] += 1
389
+
390
+ detailed_errors.append({
391
+ "type": "miss",
392
+ "batch": b,
393
+ "gold": g
394
+ })
395
+
396
+ return {
397
+ "summary": {
398
+ "exact_match": (stats["exact_match"], stats["exact_match"] / len(preds)),
399
+ "partial_match": (stats["partial_match"], stats["partial_match"] / len(preds)),
400
+ "no_event_sample": (stats["no_event_sample"], stats["no_event_sample"] / len(preds)),
401
+ "completely_wrong": (stats["completely_wrong"], stats["completely_wrong"] / len(preds)),
402
+ "miss": (stats["miss"], stats["miss"] / len(golds)),
403
+ "miss_with_overlap": (stats["miss_with_overlap"], stats["miss_with_overlap"] / len(golds)),
404
+ },
405
+ "details": detailed_errors
406
+ }
407
+
408
+ # %% [code]
409
+ ## Viết cấu trúc model vào đây
410
+ class MLP(nn.Module):
411
+ def __init__(self, in_size, hid_size, out_size):
412
+ super().__init__()
413
+ self.mlp = nn.Sequential(
414
+ nn.Linear(in_size, hid_size),
415
+ nn.ReLU(),
416
+ nn.Linear(hid_size, out_size)
417
+ )
418
+
419
+ def forward(self, x):
420
+ return self.mlp(x)
421
+
422
+ class IEModel(nn.Module):
423
+ def __init__(self, backbone_model_name, num_labels):
424
+ super().__init__()
425
+ self.encoder = AutoModel.from_pretrained(backbone_model_name)
426
+ hidden_size = self.encoder.config.hidden_size
427
+
428
+ self.token_classifier = MLP(hidden_size, hidden_size, num_labels)
429
+
430
+ def encode(self, input_ids, attention_mask):
431
+ B, n_parts, L = input_ids.shape
432
+ input_ids = input_ids.view(-1, L)
433
+ attention_mask = attention_mask.view(-1, L)
434
+
435
+ outputs = self.encoder(input_ids=input_ids, attention_mask=attention_mask)
436
+ hidden_states = outputs.last_hidden_state # B * n_parts, L, H
437
+
438
+ hidden_states = hidden_states.view(B, n_parts, L, -1).reshape(B, n_parts*L, -1) # B, L, H
439
+ return hidden_states
440
+
441
+ def get_logits(self, hidden_states):
442
+ logits = self.token_classifier(hidden_states) # B, N, classes
443
+ return logits
444
+
445
+ def forward(self, input_ids, attention_mask):
446
+ hidden_states = self.encode(input_ids, attention_mask)
447
+ logits = self.get_logits(hidden_states)
448
+
449
+ return logits
450
+
451
+ def test():
452
+ model = nn.DataParallel(IEModel(backbone_model_name, 7)).to(device)
453
+ model.eval()
454
+ total_params = sum(p.numel() for p in model.parameters())
455
+ print(f"Total params: {total_params:,}")
456
+
457
+ vocab_size = model.module.encoder.config.vocab_size
458
+ max_len = model.module.encoder.config.max_position_embeddings
459
+
460
+ bz = 32
461
+ i = torch.randint(0, vocab_size, (bz, 5, 10)).to(device)
462
+ a = torch.ones(bz, 5, 10).to(device)
463
+ g = torch.ones(bz, 3, 2, dtype=torch.long).to(device)
464
+
465
+ with torch.no_grad():
466
+ r = model(i, a)
467
+
468
+ if type(r) == tuple:
469
+ print([r[i].shape for i in range(len(r))])
470
+ else:
471
+ print(r.shape)
472
+
473
+ test()
474
+
475
+ # %% [code]
476
+ def configure_optimizers(network, optim_params, scheduler_params):
477
+ try:
478
+ optim_params = copy.copy(optim_params)
479
+ scheduler_params = copy.copy(scheduler_params)
480
+
481
+ optim_name = optim_params.pop('name')
482
+ scheduler_name = scheduler_params.pop('name')
483
+
484
+ optimizer_cls = globals().get(optim_name) or getattr(optim, optim_name, None)
485
+ scheduler_cls = globals().get(scheduler_name) or getattr(optim.lr_scheduler, scheduler_name, None)
486
+
487
+ if optimizer_cls is None:
488
+ raise ValueError(f"Optimizer '{optim_name}' is not available!")
489
+
490
+ optimizer = optimizer_cls(network.parameters(), **optim_params)
491
+
492
+ scheduler = None
493
+ if scheduler_params and scheduler_cls: # Chỉ tạo scheduler nếu có tham số
494
+ scheduler = scheduler_cls(optimizer, **scheduler_params)
495
+
496
+ return optimizer, scheduler
497
+
498
+ except KeyError as e:
499
+ raise ValueError(f"Missing {e} in config!!")
500
+
501
+ def freeze(self, model):
502
+ model.eval()
503
+ for param in model.parameters():
504
+ param.requires_grad = False
505
+
506
+ def unfreeze(self, model):
507
+ model.train()
508
+ for param in model.parameters():
509
+ param.requires_grad = True
510
+
511
+ def reduce_batch_size(loader, ratio=0.5):
512
+ new_bs = max(1, int(loader.batch_size * ratio))
513
+
514
+ shuffle = isinstance(loader.sampler, RandomSampler)
515
+
516
+ new_loader = DataLoader(
517
+ dataset=loader.dataset,
518
+ batch_size=new_bs,
519
+ shuffle=shuffle,
520
+ sampler=None if shuffle else loader.sampler,
521
+ num_workers=loader.num_workers,
522
+ collate_fn=loader.collate_fn,
523
+ pin_memory=loader.pin_memory,
524
+ drop_last=loader.drop_last,
525
+ timeout=loader.timeout,
526
+ worker_init_fn=loader.worker_init_fn,
527
+ multiprocessing_context=loader.multiprocessing_context,
528
+ generator=loader.generator,
529
+ prefetch_factor=loader.prefetch_factor if loader.num_workers > 0 else None,
530
+ persistent_workers=loader.persistent_workers,
531
+ pin_memory_device=loader.pin_memory_device
532
+ )
533
+
534
+ return new_loader
535
+
536
+ def list_to_tuple(x):
537
+ if isinstance(x, (list, tuple)):
538
+ return tuple(list_to_tuple(i) for i in x)
539
+ return x
540
+
541
+ def fmt(x):
542
+ if isinstance(x, float):
543
+ return round(x, 5)
544
+ if isinstance(x, dict):
545
+ return {k: fmt(v) for k, v in x.items()}
546
+ if isinstance(x, list):
547
+ return [fmt(v) for v in x]
548
+ return x
549
+
550
+ class ModelEmaV3Proxy(ModelEmaV3):
551
+ def __getattr__(self, name):
552
+ try:
553
+ return super().__getattr__(name)
554
+ except AttributeError:
555
+ return getattr(self.module, name)
556
+
557
+ class DataParallelProxy(nn.DataParallel):
558
+ def __getattr__(self, name):
559
+ try:
560
+ return super().__getattr__(name)
561
+ except AttributeError:
562
+ attr = getattr(self.module, name)
563
+
564
+ if callable(attr):
565
+ def wrapper(*args, **kwargs):
566
+ return self._parallel_apply_method(name, *args, **kwargs)
567
+ return wrapper
568
+
569
+ return attr
570
+
571
+ def _parallel_apply_method(self, method_name, *inputs, **kwargs):
572
+ if not self.device_ids:
573
+ return getattr(self.module, method_name)(*inputs, **kwargs)
574
+
575
+ inputs_scattered, kwargs_scattered = self.scatter(inputs, kwargs, self.device_ids)
576
+
577
+ replicas = self.replicate(self.module, self.device_ids)
578
+
579
+ outputs = self.parallel_apply(
580
+ [getattr(replica, method_name) for replica in replicas],
581
+ inputs_scattered,
582
+ kwargs_scattered
583
+ )
584
+
585
+ return self.gather(outputs, self.output_device)
586
+
587
+ def fix_bio(tags):
588
+ fixed = []
589
+
590
+ for i, tag in enumerate(tags):
591
+ if tag.startswith('I-'):
592
+ if i == 0 or fixed[i-1] == 'O':
593
+ tag = 'B-' + tag[2:]
594
+ else:
595
+ prev_type = fixed[i-1][2:]
596
+ curr_type = tag[2:]
597
+ if prev_type != curr_type:
598
+ tag = 'B-' + curr_type
599
+ fixed.append(tag)
600
+
601
+ return fixed
602
+
603
+ def extract_entities(input_ids, pred_labels):
604
+ results = []
605
+
606
+ for bidx, (ids_seq, label_seq) in enumerate(zip(input_ids, pred_labels)):
607
+ i = 0
608
+ L = len(label_seq)
609
+
610
+ while i < L:
611
+ tag = label_seq[i]
612
+
613
+ if tag.startswith('B-'):
614
+ ent_type = tag[2:]
615
+ start = i
616
+ end = i
617
+
618
+ i += 1
619
+ # kéo dài span nếu là I- cùng type
620
+ while i < L and label_seq[i] == f'I-{ent_type}':
621
+ end = i
622
+ i += 1
623
+
624
+ # lấy span input_ids
625
+ span_ids = ids_seq[start:end+1].tolist()
626
+ results.append((bidx, (span_ids, ent_type)))
627
+
628
+ else:
629
+ i += 1
630
+
631
+ return results
632
+
633
+ class Trainer:
634
+ def __init__(
635
+ self, training_time="00:11:30:00", eval_mode="max", topk=1, save_name="network", save_best=True, save_last=False, max_grad_norm=200.0,
636
+ logging=0, logging_file=False, checkpoints_dir="", early_stopping=False, eval_from_ratio=-1, eval_every=1, device='cpu',
637
+ schedule_in_step=True, use_ema=True, ema_from_ratio=-1, ema_decay=0.999, return_best=True, return_last=True
638
+ ):
639
+ self.ema_net = None
640
+
641
+ self.training_time = self._time_str_to_seconds(training_time)
642
+ self.mode = eval_mode
643
+ self.topk = topk
644
+ self.device = device
645
+ self.logging = logging if logging < epochs else 1
646
+ self.logging_file = logging_file
647
+ self.checkpoints_dir = checkpoints_dir
648
+ self.early_stopping = early_stopping
649
+ self.eval_from_ratio = eval_from_ratio
650
+ self.eval_every = eval_every
651
+ self.save_name = save_name
652
+ self.save_best = save_best
653
+ self.save_last = save_last
654
+ self.return_best = return_best
655
+ self.return_last = return_last
656
+ self.max_grad_norm = max_grad_norm
657
+ self.schedule_in_step = schedule_in_step
658
+ self.use_ema = use_ema
659
+ self.ema_from_ratio = ema_from_ratio
660
+ self.ema_decay = ema_decay
661
+
662
+ self.best_stage = [[float('-inf') if self.mode == 'max' else float('inf'), None, None]]
663
+ self.grad_scaler = torch.amp.GradScaler(self.device, init_scale=1024.0)
664
+
665
+ def fit(self, network, optimizer, scheduler, loss_fn, epochs, train_loader, val_loader=None, eval_fn=None, start_epoch=1, start_training_time=None, id2label=None):
666
+ if eval_fn is None:
667
+ if self.mode == "max":
668
+ eval_fn = lambda *x: -loss_fn(*x)
669
+ else:
670
+ eval_fn = lambda *x: loss_fn(*x)
671
+
672
+ if torch.cuda.device_count() > 1:
673
+ network = DataParallelProxy(network)
674
+ network = network.to(self.device)
675
+
676
+ if not start_training_time:
677
+ start_training_time = time.time()
678
+
679
+ start_ema = int(epochs * self.ema_from_ratio)
680
+ start_eval = int(epochs * self.eval_from_ratio)
681
+
682
+ if val_loader is None:
683
+ print(f'[Trainer CallBack] 📢 Không có Val Set, không thể đánh giá và Early Stopping!')
684
+ else:
685
+ model_to_use_str = 'mô hình EMA' if self.use_ema else 'mô hình gốc'
686
+ start_model_update_str = f'Bắt đầu cập nhật EMA từ epoch {start_epoch + start_ema}!' if self.use_ema else ''
687
+ print(f'[Trainer CallBack] 📢 Đánh giá bằng {model_to_use_str} từ epoch {start_epoch + start_eval}!', start_model_update_str)
688
+
689
+ training_log = {}
690
+ for epoch in range(start_epoch, epochs+start_epoch):
691
+ if self.use_ema and self.ema_net is None and epoch - start_epoch >= start_ema:
692
+ self.ema_net = ModelEmaV3Proxy(network, self.ema_decay, device=self.device)
693
+
694
+ try:
695
+ train_loss_epoch, train_loss_epoch_dict = self._train_epoch(network, train_loader, optimizer, scheduler, loss_fn)
696
+ logging_dict = {'lr': [group['lr'] for group in optimizer.param_groups], 'train_loss': train_loss_epoch}
697
+ logging_dict.update(train_loss_epoch_dict)
698
+
699
+ if val_loader is not None and epoch - start_epoch >= start_eval and (epoch - start_epoch - start_eval) % self.eval_every == 0:
700
+ eval_net = self.ema_net.module if (self.use_ema and self.ema_net is not None) else network
701
+
702
+ val_score, val_score_dict, _ = self._eval_epoch(eval_net, val_loader, eval_fn, id2label)
703
+ update = self._update_best_network(eval_net, val_score, epoch)
704
+ logging_dict.update({'val_score': val_score, 'best_score': self.best_stage[0][0], 'new_best_model': update})
705
+ logging_dict.update(val_score_dict)
706
+ if not self.schedule_in_step and scheduler:
707
+ scheduler.step()
708
+
709
+ except RuntimeError as e:
710
+ if "out of memory" in str(e).lower():
711
+ print(f"[Trainer CallBack] ⚠️ Epoch {epoch}/{epochs}: CUDA Out of Memory! Clearing GPU cache...")
712
+ torch.cuda.empty_cache()
713
+ gc.collect()
714
+ if torch.cuda.is_available():
715
+ torch.cuda.synchronize()
716
+ print(f"[Trainer CallBack] ✅ Epoch {epoch}/{epochs}: GPU memory cleared")
717
+
718
+ train_loader = reduce_batch_size(train_loader, ratio=0.5)
719
+ if val_loader is not None:
720
+ val_loader = reduce_batch_size(val_loader, ratio=0.5)
721
+
722
+ logging_dict = {'lr': [group['lr'] for group in optimizer.param_groups], 'train_loss': float('inf')}
723
+ else:
724
+ raise
725
+
726
+ training_log[epoch] = logging_dict
727
+ if self.is_early_stopping(epoch):
728
+ print(f'[Trainer CallBack] 📢 Epoch {epoch}/{epochs}: Detect Overfitting! Breaking Training Process...')
729
+ break
730
+ if self.logging:
731
+ if epoch % self.logging == 0:
732
+ print(f'[Trainer CallBack] 📢 Epoch {epoch}/{epochs}:', fmt(logging_dict))
733
+ else:
734
+ print(f'{epoch}...', end=' ')
735
+
736
+ if self._at_time_limit(start_training_time):
737
+ print(f'[Trainer CallBack] ⚠️ Epoch {epoch}/{epochs}: Thời gian training giới hạn là {self.training_time}, hết giờ tại epoch {epoch}/{epochs}')
738
+ break
739
+
740
+ if self.logging_file:
741
+ os.makedirs(f'{self.checkpoints_dir}/logs', exist_ok=True)
742
+ with open(f"{self.checkpoints_dir}/logs/{self.save_name}_logging.json", "a", encoding="utf-8") as f:
743
+ f.write(json.dumps(training_log))
744
+
745
+ if self.use_ema and self.ema_net is not None:
746
+ self._save_state_dict(self.ema_net.module)
747
+ else:
748
+ self._save_state_dict(network)
749
+ print(f'[Trainer CallBack] 📢 Kết thúc training.\n')
750
+
751
+ best_model, last_model = None, None
752
+ eval_net = self.ema_net.module if (self.use_ema and self.ema_net is not None) else network
753
+ if self.return_best :
754
+ best_model = self.best_stage[0][2] if self.best_stage[0][2] is not None else eval_net.state_dict()
755
+ best_model = {k.replace("module.", ""): v.detach().cpu().clone() for k, v in best_model.items()}
756
+ if self.return_last:
757
+ last_model = eval_net.state_dict()
758
+ last_model = {k.replace("module.", ""): v.detach().cpu().clone() for k, v in last_model.items()}
759
+
760
+ del network
761
+ torch.cuda.empty_cache()
762
+ gc.collect()
763
+ return training_log, best_model, last_model
764
+
765
+ def _time_str_to_seconds(self, time_str):
766
+ days, hours, minutes, seconds = map(int, time_str.split(":"))
767
+ return days * 86400 + hours * 3600 + minutes * 60 + seconds
768
+
769
+ def _update_best_network(self, network, val_score, epoch):
770
+ topk = max(1, self.topk)
771
+ self.best_stage.append([val_score, epoch, {k: v.detach().cpu().clone() for k, v in network.state_dict().items()}])
772
+ self.best_stage = sorted(self.best_stage, reverse=(self.mode == 'max'), key=lambda x: x[0])[:topk]
773
+ if val_score in [x[0] for x in self.best_stage]:
774
+ return True
775
+ return False
776
+
777
+ def is_early_stopping(self, epoch):
778
+ if self.best_stage[0][1] is None:
779
+ return False
780
+ if not self.early_stopping:
781
+ return False
782
+ return epoch - self.best_stage[0][1] >= self.early_stopping
783
+
784
+ def _at_time_limit(self, start_training_time):
785
+ return time.time() - start_training_time >= self.training_time
786
+
787
+ def _save_state_dict(self, network):
788
+ if self.topk <= 0:
789
+ return
790
+
791
+ if self.save_best:
792
+ for r in range(self.topk):
793
+ os.makedirs(f'{self.checkpoints_dir}/r{r+1}s', exist_ok=True)
794
+
795
+ for rank, (score, epoch, state_dict) in enumerate(self.best_stage):
796
+ if state_dict is None:
797
+ continue
798
+ state_dict = {k.replace("module.", ""): v.detach().cpu().clone() for k, v in state_dict.items()}
799
+ torch.save(state_dict, f'{self.checkpoints_dir}/r{rank+1}s/{self.save_name}_r{rank+1}_vs{score:.5f}_{"ema" if self.ema_net is not None else ""}.pth')
800
+ if self.save_last:
801
+ os.makedirs(f'{self.checkpoints_dir}/lasts', exist_ok=True)
802
+ state_dict = {k.replace("module.", ""): v.detach().cpu().clone() for k, v in network.state_dict().items()}
803
+ torch.save(state_dict, f'{self.checkpoints_dir}/lasts/{self.save_name}_last_{"ema" if self.ema_net is not None else ""}.pth')
804
+
805
+ def _train_epoch(self, network, train_loader, optimizer, scheduler, loss_fn):
806
+ network.train()
807
+ total_loss = 0
808
+ total_loss_dict = {}
809
+ for batch_idx, batch in enumerate(train_loader):
810
+ optimizer.zero_grad()
811
+ with torch.autocast(device_type=self.device, dtype=torch.float16):
812
+ loss, loss_dict = self._cal_loss(network, batch, batch_idx, loss_fn)
813
+
814
+ for k, v in loss_dict.items():
815
+ t = total_loss_dict.get(k, 0)
816
+ total_loss_dict[k] = t + v
817
+ self.grad_scaler.scale(loss).backward()
818
+ self.grad_scaler.unscale_(optimizer)
819
+ grad_norm = nn.utils.clip_grad_norm_(network.parameters(), self.max_grad_norm)
820
+ # print(grad_norm) # Bỏ cmt dòng này để biết nên chọn max_grad_norm bằng bao nhiêu...
821
+ self.grad_scaler.step(optimizer)
822
+ self.grad_scaler.update()
823
+ if self.schedule_in_step and scheduler:
824
+ scheduler.step()
825
+ if self.use_ema and self.ema_net is not None:
826
+ self.ema_net.update(network)
827
+ total_loss += loss
828
+ return (total_loss / len(train_loader)).item(), {k: v.item() / len(train_loader) for k, v in total_loss_dict.items()}
829
+
830
+ def _eval_epoch(self, network, val_loader, eval_fn, id2label):
831
+ network.eval()
832
+ total_score = 0.0
833
+ total_score_dict = {}
834
+ object_lists = None # sẽ init sau
835
+
836
+ with torch.no_grad():
837
+ for batch_idx, batch in enumerate(val_loader):
838
+ score, score_dict, objects = self._cal_val_score(network, batch, batch_idx, eval_fn, id2label)
839
+ total_score += score
840
+
841
+ for k, v in score_dict.items():
842
+ t = total_score_dict.get(k, 0)
843
+ total_score_dict[k] = t + v
844
+
845
+ if objects:
846
+ if object_lists is None:
847
+ object_lists = [[] for _ in range(len(objects))]
848
+
849
+ for i, obj in enumerate(objects):
850
+ object_lists[i].append(obj.detach())
851
+
852
+ if object_lists is not None:
853
+ object_arrays = [
854
+ torch.concat(obj_list, dim=0).cpu().numpy()
855
+ for obj_list in object_lists
856
+ ]
857
+ else:
858
+ object_arrays = []
859
+
860
+ return total_score / len(val_loader), {k: v / len(val_loader) for k, v in total_score_dict.items()}, object_arrays
861
+
862
+ def _cal_loss(self, network, batch, batch_idx, loss_fn):
863
+ # Bạn cần override _cal_loss để tính loss
864
+ input_ids = batch['input_ids'].to(self.device)
865
+ attention_mask = batch['attention_mask'].to(self.device)
866
+ token_labels = batch['token_labels'].to(self.device)
867
+
868
+ token_logits = network(input_ids, attention_mask)
869
+
870
+ loss_dict = loss_fn(
871
+ token_logits, token_labels,
872
+ )
873
+ return loss_dict['total'], loss_dict
874
+
875
+ def _cal_val_score(self, network, batch, batch_idx, eval_fn, id2label):
876
+ # Bạn cần override _cal_val_score để tính val score, list bên cạnh là để trả về y hay pred gì đó (nếu cần)
877
+ input_ids = batch['input_ids'].to(self.device)
878
+ attention_mask = batch['attention_mask'].to(self.device)
879
+ gold_entities = batch['gold_entities']
880
+
881
+ B, _, _ = input_ids.shape
882
+
883
+ token_logits = network(input_ids, attention_mask)
884
+ pred_labels = torch.argmax(token_logits, dim=-1) # (B, L)
885
+ pred_labels = [[id2label[i.item()] for i in seq] for seq in pred_labels]
886
+ pred_labels = [fix_bio(seq) for seq in pred_labels]
887
+
888
+ pred_ids = extract_entities(input_ids.reshape(B, -1), pred_labels)
889
+ pred_ids = list_to_tuple(pred_ids)
890
+
891
+ gold_ids = list_to_tuple(gold_entities)
892
+
893
+ score_dict = eval_fn(pred_ids, gold_ids)
894
+ return score_dict['f1'], score_dict, []
895
+
896
+ # %% [code]
897
+ class PhoBERTSpanAligner:
898
+ def __init__(self, tokenizer, max_len):
899
+ self.tokenizer = tokenizer
900
+ self.max_len = max_len
901
+
902
+ # ===== 1. Extract discontinuous spans =====
903
+ def extract_spans(self, sample):
904
+ entity_spans = []
905
+
906
+ for event in sample["entities"]:
907
+ entity_type = event["label"]
908
+ spans = [tuple(event["offset"])]
909
+ entity_spans.append({
910
+ "spans": spans,
911
+ "label": entity_type
912
+ })
913
+
914
+ return entity_spans
915
+
916
+ # ===== 2. Word offsets =====
917
+ def build_word_offsets(self, text, words):
918
+ offsets = []
919
+ pointer = 0
920
+
921
+ for word in words:
922
+ start = text.find(word, pointer)
923
+ end = start + len(word)
924
+ offsets.append((start, end))
925
+ pointer = end
926
+
927
+ return offsets
928
+
929
+ # ===== 3. Char → word =====
930
+ def char_span_to_word_span(self, word_offsets, start, end):
931
+ start_word = None
932
+ end_word = None
933
+
934
+ for i, (w_start, w_end) in enumerate(word_offsets):
935
+ if w_start <= start < w_end:
936
+ start_word = i
937
+ if w_start < end <= w_end:
938
+ end_word = i
939
+
940
+ return start_word, end_word
941
+
942
+ # ===== 4. Word → subword =====
943
+ def word_to_subword_map(self, words):
944
+ mapping = []
945
+ subword_index = 1 # <s>
946
+
947
+ for word in words:
948
+ sub_tokens = self.tokenizer.tokenize(word)
949
+ start = subword_index
950
+ end = subword_index + len(sub_tokens) - 1
951
+ mapping.append((start, end))
952
+ subword_index += len(sub_tokens)
953
+
954
+ return mapping
955
+
956
+ # ===== 5. Span → subword =====
957
+ def span_to_subword(self, word_offsets, word_subword_map, spans):
958
+ sub_spans = []
959
+
960
+ for span_start, span_end in spans:
961
+ w_start, w_end = self.char_span_to_word_span(
962
+ word_offsets, span_start, span_end
963
+ )
964
+ if w_start is None or w_end is None:
965
+ continue
966
+
967
+ sub_start = word_subword_map[w_start][0]
968
+ sub_end = word_subword_map[w_end][1]
969
+ sub_spans.append((sub_start, sub_end))
970
+
971
+ return sub_spans
972
+
973
+ def extract_valid_spans(self, sub_spans):
974
+ valid_spans = []
975
+ for s, e in sub_spans:
976
+ if s < 0 or e < 0 or s >= self.max_len or e >= self.max_len or s > e:
977
+ continue
978
+ valid_spans.append((s, e))
979
+ return valid_spans
980
+
981
+ def encode(self, sample):
982
+ text = sample["text"]
983
+ entities = self.extract_spans(sample)
984
+
985
+ # ===== 1. Word tokenize =====
986
+ words = word_tokenize(text)
987
+ sentence = " ".join(words)
988
+
989
+ # ===== 2. Mapping =====
990
+ word_offsets = self.build_word_offsets(text, words)
991
+ word_subword_map = self.word_to_subword_map(words)
992
+
993
+ # ===== 3. Tokenize FULL =====
994
+ encoding = self.tokenizer(
995
+ sentence,
996
+ max_length=self.max_len,
997
+ truncation=True,
998
+ padding="max_length",
999
+ return_tensors="pt"
1000
+ )
1001
+ input_ids = encoding["input_ids"][0]
1002
+ attention_mask = encoding["attention_mask"][0]
1003
+
1004
+ # ===== 5. Convert spans =====
1005
+ entities_gold_spans = []
1006
+
1007
+ for ent in entities:
1008
+ label = ent["label"]
1009
+
1010
+ sub_spans = self.span_to_subword(
1011
+ word_offsets,
1012
+ word_subword_map,
1013
+ ent["spans"]
1014
+ )
1015
+ valid_spans = self.extract_valid_spans(sub_spans)
1016
+ if len(valid_spans) == 0:
1017
+ continue
1018
+ entities_gold_spans.append((tuple(valid_spans), label))
1019
+
1020
+ return {
1021
+ "input_ids": input_ids,
1022
+ "attention_mask": attention_mask,
1023
+ "entities_gold_spans": entities_gold_spans,
1024
+ }
1025
+
1026
+ def generate_candidate_spans(seq_len, max_span_len):
1027
+ spans = []
1028
+ for i in range(1, seq_len+1):
1029
+ for j in range(i, min(i+max_span_len, seq_len+1)):
1030
+ spans.append((i, j))
1031
+ return spans
1032
+
1033
+ class KLTNDataset(Dataset):
1034
+ def __init__(self, all_data, using_idxes, label2id, tokenizer, max_len, max_n_parts):
1035
+ super().__init__()
1036
+ self.tokenizer = tokenizer
1037
+ self.aligner = PhoBERTSpanAligner(tokenizer, max_len*max_n_parts)
1038
+ self.all_data = all_data
1039
+ self.using_idxes = using_idxes
1040
+ self.label2id = label2id
1041
+ self.max_len = max_len
1042
+ self.max_n_parts = max_n_parts
1043
+
1044
+ def __len__(self):
1045
+ return len(self.using_idxes)
1046
+
1047
+ def __getitem__(self, idx):
1048
+ ridx = self.using_idxes[idx]
1049
+ sample = self.all_data[ridx]
1050
+ result = self.aligner.encode(sample)
1051
+
1052
+ input_ids = result["input_ids"].squeeze(0)
1053
+ attention_mask = result["attention_mask"].squeeze(0)
1054
+ entities_gold_spans = result["entities_gold_spans"]
1055
+
1056
+ # Get label
1057
+ gold_entities = []
1058
+ token_labels = torch.ones_like(input_ids) * (1-attention_mask) * (-100)
1059
+ for spans, label in entities_gold_spans:
1060
+ s, e = spans[0]
1061
+
1062
+ token_labels[s] = self.label2id[f'B-{label}']
1063
+ token_labels[s+1:e+1] = self.label2id[f'I-{label}']
1064
+
1065
+ gold_entities.append((tuple(input_ids[s:e+1].tolist()), label))
1066
+
1067
+ input_ids = input_ids.reshape(self.max_n_parts, self.max_len)
1068
+ attention_mask = attention_mask.reshape(self.max_n_parts, self.max_len)
1069
+
1070
+ n_valid_parts = math.ceil(attention_mask.sum().item() / self.max_len)
1071
+ input_ids = input_ids[:n_valid_parts]
1072
+ attention_mask = attention_mask[:n_valid_parts]
1073
+ token_labels = token_labels[:n_valid_parts*self.max_len]
1074
+
1075
+ return {
1076
+ "input_ids": input_ids,
1077
+ "attention_mask": attention_mask,
1078
+ "token_labels": token_labels,
1079
+ "gold_entities": gold_entities,
1080
+ }
1081
+
1082
+ def _pad_batch(tensor_list, pad_value=0):
1083
+ """
1084
+ tensor_list: list of tensors
1085
+ mỗi tensor shape: (Nk, n_parts_i, max_len_i)
1086
+
1087
+ return:
1088
+ padded tensor shape: (B, max_Nk, max_n_parts, max_len)
1089
+ """
1090
+
1091
+ # lấy max toàn batch
1092
+ max_Nk = max(t.size(0) for t in tensor_list)
1093
+ max_n_parts = max(t.size(1) for t in tensor_list)
1094
+ max_len = max(t.size(2) for t in tensor_list)
1095
+
1096
+ padded = []
1097
+
1098
+ for t in tensor_list:
1099
+ Nk, n_parts_i, max_len_i = t.shape
1100
+
1101
+ # pad chiều n_parts và max_len trước
1102
+ if n_parts_i < max_n_parts or max_len_i < max_len:
1103
+ new_t = t.new_full(
1104
+ (Nk, max_n_parts, max_len),
1105
+ pad_value
1106
+ )
1107
+ new_t[:, :n_parts_i, :max_len_i] = t
1108
+ t = new_t
1109
+
1110
+ # pad chiều Nk
1111
+ if Nk < max_Nk:
1112
+ pad_tensor = t.new_full(
1113
+ (max_Nk - Nk, max_n_parts, max_len),
1114
+ pad_value
1115
+ )
1116
+ t = torch.cat([t, pad_tensor], dim=0)
1117
+
1118
+ padded.append(t)
1119
+
1120
+ return torch.stack(padded) # (B, max_Nk, max_n_parts, max_len)
1121
+
1122
+ def collate_fn(batch):
1123
+ gold_entities = []
1124
+ for bidx, b in enumerate(batch):
1125
+ for entity in b['gold_entities']:
1126
+ gold_entities.append([bidx, entity])
1127
+
1128
+ input_ids = [b["input_ids"].unsqueeze(-1) for b in batch]
1129
+ attention_mask = [b["attention_mask"].unsqueeze(-1) for b in batch]
1130
+ token_labels = [b["token_labels"].unsqueeze(-1).unsqueeze(-1) for b in batch]
1131
+
1132
+ # pad theo Nk
1133
+ input_ids = _pad_batch(input_ids, pad_value=1).squeeze(-1)
1134
+ attention_mask = _pad_batch(attention_mask, pad_value=0).squeeze(-1)
1135
+ token_labels = _pad_batch(token_labels, pad_value=-100).squeeze(-1).squeeze(-1)
1136
+
1137
+ return {
1138
+ "input_ids": input_ids,
1139
+ "attention_mask": attention_mask,
1140
+ "token_labels": token_labels,
1141
+ "gold_entities": gold_entities,
1142
+ }
1143
+
1144
+ # %% [code]
1145
+ def shift_bidx(spans, batch_idx):
1146
+ shifted = []
1147
+ for bidx, ent in spans:
1148
+ new_bidx = bidx + batch_idx * batch_size
1149
+ shifted.append((new_bidx, ent))
1150
+ return shifted
1151
+
1152
+ def refactor_entities(entities, save_dict):
1153
+ i, c = [], []
1154
+ for bidx, (ids, lb) in entities:
1155
+ if (bidx, ids) not in i:
1156
+ i.append((bidx, ids))
1157
+
1158
+ if (bidx, (ids, lb)) not in c:
1159
+ c.append((bidx, (ids, lb)))
1160
+
1161
+ save_dict['Ent-I'].extend(i)
1162
+ save_dict['Ent-C'].extend(c)
1163
+
1164
+ def test(network, state_dicts, test_loader, eval_fn, analyzer, device, id2label, tokenizer):
1165
+ if torch.cuda.device_count() > 1:
1166
+ network = DataParallelProxy(network)
1167
+ network = network.to(device)
1168
+ network.eval()
1169
+
1170
+ eval_types = ['Ent-I', 'Ent-C']
1171
+
1172
+ all_pred = {eval_type: [] for eval_type in eval_types}
1173
+ all_gold = {eval_type: [] for eval_type in eval_types}
1174
+
1175
+ list_input_ids = []
1176
+
1177
+ with torch.no_grad():
1178
+ for batch_idx, batch in enumerate(test_loader):
1179
+ input_ids = batch['input_ids'].to(device)
1180
+ attention_mask = batch['attention_mask'].to(device)
1181
+ gold_entities = batch['gold_entities']
1182
+
1183
+ B, _, _ = input_ids.shape
1184
+ list_input_ids.extend(input_ids.reshape(B, -1).tolist())
1185
+
1186
+ list_logits = []
1187
+ for sd in state_dicts:
1188
+ if torch.cuda.device_count() > 1:
1189
+ network.module.load_state_dict(sd)
1190
+ else:
1191
+ network.load_state_dict(sd)
1192
+
1193
+ token_logits = network(input_ids, attention_mask)
1194
+ list_logits.append(token_logits)
1195
+
1196
+ ensemble_logits = torch.stack(list_logits, dim=0).mean(dim=0)
1197
+ ensemble_labels = torch.argmax(ensemble_logits, dim=-1) # (B, L)
1198
+ ensemble_labels = [[id2label[i.item()] for i in seq] for seq in ensemble_labels]
1199
+ ensemble_labels = [fix_bio(seq) for seq in ensemble_labels]
1200
+
1201
+ pred_entities = extract_entities(input_ids.reshape(B, -1), ensemble_labels)
1202
+ pred_entities = shift_bidx(pred_entities, batch_idx)
1203
+ refactor_entities(pred_entities, all_pred)
1204
+
1205
+ gold_entities = shift_bidx(gold_entities, batch_idx)
1206
+ refactor_entities(gold_entities, all_gold)
1207
+
1208
+ # ===== GLOBAL EVAL =====
1209
+ final_score = {}
1210
+ for eval_type in eval_types:
1211
+ score = eval_fn(list_to_tuple(all_pred[eval_type]), list_to_tuple(all_gold[eval_type]))
1212
+ final_score[eval_type] = score
1213
+
1214
+ analyze_result = analyzer.analyze(list_to_tuple(all_pred['Ent-I']), list_to_tuple(all_gold['Ent-I']))
1215
+
1216
+ # ===== PREDICT =====
1217
+ predictions = []
1218
+ for input_ids in list_input_ids:
1219
+ predictions.append([tokenizer.decode(input_ids, skip_special_tokens=True, clean_up_tokenization_spaces=True)])
1220
+ for bidx, (ids, lb) in all_pred['Ent-C']:
1221
+ predictions[bidx].append((tokenizer.decode(ids, skip_special_tokens=True, clean_up_tokenization_spaces=True), lb))
1222
+
1223
+ return final_score, analyze_result, predictions
1224
+
1225
+ # %% [code]
1226
+ with open(f'{train_dir}/train.json', "r", encoding="utf-8") as f:
1227
+ data_train = json.load(f)
1228
+
1229
+ with open(f'{test_dir}/test.json', "r", encoding="utf-8") as f:
1230
+ data_test = json.load(f)
1231
+
1232
+ print('Train:', len(data_train))
1233
+ print('Test:', len(data_test))
1234
+
1235
+ # %% [code]
1236
+ entity_types = sorted(list(set([e['label'] for d in data_train + data_test for e in d['entities']])))
1237
+ bio_entity_type = ['O'] + [f'{prefix}-{ent}' for ent in entity_types for prefix in ['B', 'I']]
1238
+ label2id = {l: i for i, l in enumerate(bio_entity_type)}
1239
+ id2label = {i: l for l, i in label2id.items()}
1240
+
1241
+ # %% [code]
1242
+ zero_entities_idxes = []
1243
+ for idx, d in enumerate(data_train):
1244
+ if len(d['entities']) == 0:
1245
+ zero_entities_idxes.append(idx)
1246
+
1247
+ n_zero_entities_samples = len(zero_entities_idxes)
1248
+ n_has_entities_samples = len(data_train) - n_zero_entities_samples
1249
+
1250
+ random.seed(42)
1251
+ k = min(int(n_has_entities_samples * zero_entities_rate), len(zero_entities_idxes))
1252
+ sampled_zero_entities_idxes = random.sample(zero_entities_idxes, k)
1253
+
1254
+ new_data_train = []
1255
+ for idx, d in enumerate(data_train):
1256
+ if len(d['entities']) == 0:
1257
+ if idx in sampled_zero_entities_idxes:
1258
+ new_data_train.append(d)
1259
+ else:
1260
+ new_data_train.append(d)
1261
+ data_train = new_data_train
1262
+
1263
+ print('Train:', len(data_train))
1264
+
1265
+ # %% [code]
1266
+ if debug_only:
1267
+ data_train = data_train[:10]
1268
+ data_test = data_test[:10]
1269
+
1270
+ print('Train:', len(data_train))
1271
+ print('Test:', len(data_test))
1272
+
1273
+ # %% [code]
1274
+ tokenizer = AutoTokenizer.from_pretrained(backbone_model_name)
1275
+
1276
+ # %% [code]
1277
+ print('Experiment name:', state_dict_save_name)
1278
+
1279
+ # %% [code]
1280
+ if not test_only:
1281
+ full_idxes = np.array(range(len(data_train)))
1282
+ training_logs, best_models, last_models = [], [], []
1283
+ start_training_time = time.time()
1284
+ for seed in SEEDS:
1285
+ kf = KFold(n_splits=nfolds, shuffle=True, random_state=seed)
1286
+ for fold_idx, (tr_idx, va_idx) in enumerate(kf.split(full_idxes)):
1287
+ if only_fold_idx is not None and only_fold_idx >= 0 and only_fold_idx != fold_idx:
1288
+ continue
1289
+ set_seed(seed)
1290
+
1291
+ train_idxes, val_idxes = full_idxes[tr_idx], full_idxes[va_idx]
1292
+
1293
+ trainset = KLTNDataset(data_train, train_idxes, label2id, tokenizer, **train_memory_params)
1294
+ valset = KLTNDataset(data_train, val_idxes, label2id, tokenizer, **val_memory_params)
1295
+
1296
+ generator = torch.Generator()
1297
+ generator.manual_seed(seed)
1298
+ train_loader = DataLoader(trainset, generator=generator, collate_fn=collate_fn, **train_loader_params)
1299
+ val_loader = DataLoader(valset, generator=generator, collate_fn=collate_fn, **val_loader_params)
1300
+
1301
+ my_model = IEModel(
1302
+ num_labels=len(label2id),
1303
+ **model_params
1304
+ )
1305
+ total_params = sum(p.numel() for p in my_model.parameters())
1306
+ print(f"Total params: {total_params:,}")
1307
+
1308
+ # optimizer, scheduler = configure_optimizers(my_model, optim_params, scheduler_params)
1309
+ encoder_params = set(map(id, my_model.encoder.parameters()))
1310
+ other_params = [
1311
+ p for p in my_model.parameters()
1312
+ if id(p) not in encoder_params
1313
+ ]
1314
+ optimizer = optim.AdamW([
1315
+ {"params": my_model.encoder.parameters(), "lr": 2e-5},
1316
+ {"params": other_params}
1317
+ ], lr=5e-4)
1318
+ scheduler = optim.lr_scheduler.CosineAnnealingLR(optimizer, T_max=20, eta_min=1e-6)
1319
+
1320
+ loss_fn = CustomLoss(
1321
+ **loss_func_params
1322
+ )
1323
+ eval_fn = CustomEvalFn(**eval_func_params)
1324
+ trainer_params['save_name'] = f'{state_dict_save_name}_s{seed}_f{fold_idx}'
1325
+ trainer = Trainer(**trainer_params)
1326
+
1327
+ print(f'Start Training Fold {fold_idx}...')
1328
+ training_log, best_model, last_model = trainer.fit(
1329
+ my_model, optimizer, scheduler, loss_fn, epochs, train_loader, val_loader, eval_fn,
1330
+ start_epoch=1, start_training_time=start_training_time, id2label=id2label
1331
+ )
1332
+
1333
+ training_logs.append(training_log)
1334
+ best_models.append(best_model)
1335
+ last_models.append(last_model)
1336
+
1337
+ # %% [code]
1338
+ def load_all_state_dicts(folder):
1339
+ files = []
1340
+
1341
+ for file in os.listdir(folder):
1342
+ if file.endswith(".pt") or file.endswith(".pth"):
1343
+ m = re.search(r"f(\d+)", file) # tìm f<số>
1344
+ if m:
1345
+ fold = int(m.group(1))
1346
+ files.append((fold, file))
1347
+
1348
+ # sort theo fold
1349
+ files.sort(key=lambda x: x[0])
1350
+
1351
+ state_dicts = []
1352
+ for fold, file in files:
1353
+ path = os.path.join(folder, file)
1354
+ print(f"Loading fold {fold}: {file}")
1355
+ state_dict = torch.load(path, map_location="cpu")
1356
+ state_dicts.append(state_dict)
1357
+
1358
+ return state_dicts
1359
+
1360
+ if test_only:
1361
+ snapshot_download(repo_id=repo_name, local_dir="", repo_type="model", allow_patterns=[f"{state_dict_save_name}/**"])
1362
+ get_ipython().system('rm -rf .cache .gitattributes')
1363
+
1364
+ best_models = load_all_state_dicts(f"{state_dict_save_name}/r1s")
1365
+ last_models = load_all_state_dicts(f"{state_dict_save_name}/lasts")
1366
+
1367
+ # %% [code]
1368
+ os.makedirs(f'{checkpoints_dir}/results', exist_ok=True)
1369
+ testset = KLTNDataset(data_test, range(len(data_test)), label2id, tokenizer, **val_memory_params)
1370
+ generator = torch.Generator()
1371
+ test_loader = DataLoader(testset, generator=generator, collate_fn=collate_fn, **val_loader_params)
1372
+ eval_fn = CustomEvalFn(**eval_func_params)
1373
+ analyzer = SpanErrorAnalyzer()
1374
+ my_model = IEModel(
1375
+ num_labels=len(label2id),
1376
+ **model_params
1377
+ )
1378
+ total_params = sum(p.numel() for p in my_model.parameters())
1379
+ print(f"Total params: {total_params:,}")
1380
+
1381
+ # %% [code]
1382
+ start_time = time.time()
1383
+ result_test = None
1384
+ analyze_result = None
1385
+
1386
+ best_score, best_analyze_result, best_pred_test = test(my_model, best_models, test_loader, eval_fn, analyzer, device, id2label, tokenizer)
1387
+ last_score, last_analyze_result, last_pred_test = test(my_model, last_models, test_loader, eval_fn, analyzer, device, id2label, tokenizer)
1388
+
1389
+ result_test = {"Best model": best_score, "Last model": last_score}
1390
+ analyze_result = {"Best model": best_analyze_result, "Last model": last_analyze_result}
1391
+ analyze_result_sumary = {"Best model": best_analyze_result['summary'], "Last model": last_analyze_result['summary']}
1392
+ pred_test = {"Best model": best_pred_test, "Last model": last_pred_test}
1393
+
1394
+ with open(f"{checkpoints_dir}/results/{state_dict_save_name}_test.json", "w", encoding="utf-8") as f:
1395
+ json.dump(result_test, f, ensure_ascii=False, indent=2)
1396
+
1397
+ with open(f"{checkpoints_dir}/results/{state_dict_save_name}_error_analyze_result.json", "w", encoding="utf-8") as f:
1398
+ json.dump(analyze_result, f, ensure_ascii=False, indent=2)
1399
+
1400
+ with open(f"{checkpoints_dir}/results/{state_dict_save_name}_pred_test.json", "w", encoding="utf-8") as f:
1401
+ json.dump(pred_test, f, ensure_ascii=False, indent=2)
1402
+
1403
+ print('Test:', time.time() - start_time, 's --> Done!')
1404
+ print(json.dumps(analyze_result_sumary, ensure_ascii=False, indent=4))
1405
+
1406
+ # %% [code]
1407
+ best_pred_test[:10]
1408
+
1409
+ # %% [code]
1410
+ last_pred_test[:10]
1411
+
1412
+ # %% [code]
1413
+ def dict_to_df(data):
1414
+ row_tuples = []
1415
+ row_values = []
1416
+
1417
+ metrics = ["precision", "recall", "f1"]
1418
+
1419
+ # Lấy model đầu tiên
1420
+ first_model = next(iter(data.values()))
1421
+
1422
+ # eval_keys
1423
+ eval_keys = list(first_model.keys())
1424
+
1425
+ for eval_key in eval_keys:
1426
+ row_tuples.append(eval_key)
1427
+ row = {}
1428
+
1429
+ for model_name, model_data in data.items():
1430
+ for metric in metrics:
1431
+ row[(model_name, metric)] = model_data[eval_key][metric]
1432
+
1433
+ row_values.append(row)
1434
+
1435
+ # ===== DataFrame =====
1436
+ df = pd.DataFrame(row_values)
1437
+
1438
+ # MultiIndex columns
1439
+ df.columns = pd.MultiIndex.from_tuples(df.columns)
1440
+
1441
+ # Index
1442
+ df.index = pd.Index(row_tuples, name="evaluation")
1443
+
1444
+ # ===== Sort =====
1445
+ sort_keys = []
1446
+ if ("Best model", "f1") in df.columns:
1447
+ sort_keys.append(("Best model", "f1"))
1448
+ if ("Last model", "f1") in df.columns:
1449
+ sort_keys.append(("Last model", "f1"))
1450
+
1451
+ if sort_keys:
1452
+ df = df.sort_values(by=sort_keys, ascending=False)
1453
+
1454
+ return df
1455
+
1456
+ result_test_df = dict_to_df(result_test)
1457
+ result_test_df.to_excel(f"{checkpoints_dir}/results/{state_dict_save_name}_test_df.xlsx")
1458
+ result_test_df
1459
+
1460
+ # %% [code]
1461
+ key = ("Best model", "f1")
1462
+ result_test_df_best = result_test_df.sort_values(by=key, ascending=False).groupby(level="evaluation").head(1)
1463
+ result_test_df_best.to_excel(f"{checkpoints_dir}/results/{state_dict_save_name}_test_df_best.xlsx")
1464
+ result_test_df_best
1465
+
1466
+ # %% [code]
1467
+ def get_avg_best_score(logs):
1468
+ return float(np.mean([list(log.values())[-1]['best_score'] for log in logs]))
1469
+
1470
+ def get_avg_log(logs, epochs):
1471
+ avg_log = {}
1472
+
1473
+ for epoch in range(1, epochs + 1):
1474
+ val_score = 0.0
1475
+ train_loss = 0.0
1476
+ n_eval = 0
1477
+
1478
+ for idx in range(len(logs)):
1479
+ log = logs[idx].get(epoch, logs[idx].get(str(epoch)))
1480
+ if log is None:
1481
+ continue
1482
+
1483
+ val_score += log.get('val_score', 0.0)
1484
+ train_loss += log.get('train_loss', 0.0)
1485
+ n_eval += 1
1486
+
1487
+ if n_eval == 0:
1488
+ continue
1489
+
1490
+ avg_log[epoch] = {
1491
+ 'train_loss': train_loss / n_eval,
1492
+ 'val_score': val_score / n_eval if val_score != 0 else float('inf')
1493
+ }
1494
+
1495
+ return avg_log
1496
+
1497
+ def parse_label_key(label: str):
1498
+ try:
1499
+ first = float(label.split('_', 1)[0]) # số đầu: trước dấu _
1500
+ last = float(re.findall(r'_(\d+(?:\.\d+)?)$', label)[0])
1501
+ return first, last
1502
+ except:
1503
+ return (0, 0)
1504
+
1505
+ def plot_training_logs(logs_dict, save_path=None, figsize=(24, 10)):
1506
+ fig, axes = plt.subplots(1, 2, figsize=figsize)
1507
+
1508
+ # ===== Plot Train Loss =====
1509
+ for name, log in logs_dict.items():
1510
+ epochs = sorted(log.keys())
1511
+ train_loss = [log[e]['train_loss'] for e in epochs]
1512
+ axes[0].plot(epochs, train_loss, label=name)
1513
+
1514
+ axes[0].set_xlabel('Epoch')
1515
+ axes[0].set_ylabel('Train Loss')
1516
+ axes[0].set_title('Training Loss')
1517
+ axes[0].grid(True)
1518
+
1519
+ # ===== Plot Validation Score =====
1520
+ for name, log in logs_dict.items():
1521
+ epochs = sorted(log.keys())
1522
+ val_score = [log[e]['val_score'] for e in epochs]
1523
+ axes[1].plot(epochs, val_score, label=name)
1524
+
1525
+ axes[1].set_xlabel('Epoch')
1526
+ axes[1].set_ylabel('Validation Score')
1527
+ axes[1].set_title('Validation Score')
1528
+ axes[1].grid(True)
1529
+
1530
+ # ===== Shared Legend =====
1531
+ handles, labels = axes[0].get_legend_handles_labels()
1532
+ pairs = list(zip(handles, labels))
1533
+ pairs_sorted = sorted(
1534
+ pairs,
1535
+ key=lambda x: parse_label_key(x[1])
1536
+ )
1537
+ handles_sorted, labels_sorted = zip(*pairs_sorted)
1538
+
1539
+ axes[0].legend(
1540
+ handles_sorted,
1541
+ labels_sorted,
1542
+ loc='center left',
1543
+ bbox_to_anchor=(1.01, 0.5),
1544
+ borderaxespad=0.
1545
+ )
1546
+
1547
+ plt.tight_layout(rect=[0, 0, 1, 1])
1548
+
1549
+ if save_path is not None:
1550
+ os.makedirs(os.path.dirname(save_path), exist_ok=True) if os.path.dirname(save_path) else None
1551
+ plt.savefig(save_path, dpi=300, bbox_inches='tight')
1552
+
1553
+ plt.show()
1554
+
1555
+ # %% [code]
1556
+ if not test_only:
1557
+ snapshot_download(repo_id=repo_name, local_dir="", repo_type="model", allow_patterns=["**/*.json"], ignore_patterns=["5_score_span_base_12/**"])
1558
+ get_ipython().system('rm -rf .cache .gitattributes')
1559
+
1560
+ # %% [code]
1561
+ if not test_only:
1562
+ experiments = {}
1563
+ for experiment in os.listdir(pretrained_dir):
1564
+ experiment_logs = []
1565
+ try:
1566
+ for seed in SEEDS:
1567
+ for fold_idx in range(nfolds):
1568
+ with open(f"{pretrained_dir}/{experiment}/logs/{experiment}_s{seed}_f{fold_idx}_logging.json", "r", encoding="utf-8") as f:
1569
+ experiment_log = json.load(f)
1570
+ experiment_logs.append(experiment_log)
1571
+ except:
1572
+ pass
1573
+ experiments[experiment] = get_avg_log(experiment_logs, 1000)
1574
+ experiments[state_dict_save_name] = get_avg_log(training_logs, 1000)
1575
+
1576
+ # %% [code]
1577
+ if not test_only:
1578
+ score = get_avg_best_score(training_logs)
1579
+ state_dict_save_name, score
1580
+
1581
+ # %% [code]
1582
+ if not test_only:
1583
+ plot_training_logs(experiments, save_path=f'{checkpoints_dir}/logs/{state_dict_save_name}_log_plot.jpg', figsize=(18, 7.5))
1584
+
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