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Browse files- LTA_openwebtext_dualt/logs/lm1b_len128_lognormal_atoms_sde_watch/infer_lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522_step_0037000_logistic_normal_t1p45.log +76 -0
- LTA_openwebtext_dualt/logs/lm1b_len128_lognormal_atoms_sde_watch/infer_lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522_step_0055000_logistic_normal_t1p45.log +76 -0
- LTA_openwebtext_dualt/mini_owt_fit/logs/mini_owt_fit_bert_len1024_C1_to_1024_absrope_time4_d768_l12_h12_full_gbs512_8gpu_20260526_151837.log +48 -0
- LTA_openwebtext_dualt/mini_owt_fit/logs/mini_owt_fit_t5_bernoulliwrong_len1024_bos_eos_C1_to_1024_absrope_time4_d768_l12_h12_native_nofloor_full_gbs512_8gpu_20260527_081554.log +0 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/activate +130 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/activate.ps1 +82 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/activate_this.py +59 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/httpx +10 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python +1 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python3.12 +1 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/tiny-agents +10 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/tqdm +10 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/evolla/modular_evolla.py +893 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vaultgemma/__init__.py +28 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vaultgemma/configuration_vaultgemma.py +109 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vaultgemma/modeling_vaultgemma.py +546 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/__init__.py +29 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/configuration_vit.py +72 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/image_processing_pil_vit.py +30 -0
- LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/image_processing_vit.py +30 -0
LTA_openwebtext_dualt/logs/lm1b_len128_lognormal_atoms_sde_watch/infer_lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522_step_0037000_logistic_normal_t1p45.log
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[watch-lognormal-sde] 2026-05-23_02:01:03 infer runs/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0037000.pt -> docs/lta_samples/metrics_20260522/lm1b_len128_lognormal_atoms_every1k_logistic_normal_sde_t1p45_steps128_n256/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0037000
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[load] runs/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0037000.pt
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[ckpt] step=37000
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[sde] generated 16/256
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[sde] generated 32/256
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[sde] generated 48/256
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[sde] generated 64/256
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[sde] generated 80/256
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[sde] generated 96/256
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[sde] generated 112/256
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[sde] generated 128/256
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[sde] generated 144/256
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[sde] generated 160/256
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[sde] generated 176/256
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[sde] generated 192/256
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[sde] generated 208/256
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[sde] generated 224/256
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[sde] generated 240/256
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[sde] generated 256/256
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[score] loading scorer: /e2e-data/evad-tech-vla/wanghan58/models/flowtext_scorers/gpt2-large-standard
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[summary] {
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"type": "summary",
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"checkpoint": "runs/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0037000.pt",
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| 24 |
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"step": 37000,
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| 25 |
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"decode": {
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| 26 |
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"decode_rule": "logistic_normal_resample_sde",
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| 27 |
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"steps": 128,
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| 28 |
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"model_t_mode": "const0.5",
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| 29 |
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"mean_mode": "anchor_semantic",
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| 30 |
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"endpoint_floor": 0.0,
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| 31 |
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"concentration_min": 1.0,
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| 32 |
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"concentration_max": 1024.0,
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| 33 |
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"endpoint_temp": 1.45,
|
| 34 |
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"support_power": 1.0,
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| 35 |
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"semantic_power": 1.0,
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| 36 |
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"noise_init": "logistic_normal",
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| 37 |
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"noise_sigma": 3.0,
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| 38 |
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"noise_dirichlet_concentration": 1.0,
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| 39 |
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"sde_resample": "logistic_normal",
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| 40 |
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"logistic_normal_sigma_min": 0.18,
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| 41 |
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"logistic_normal_sigma_max": 3.0,
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| 42 |
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"logistic_normal_tau_min": 0.65,
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| 43 |
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"logistic_normal_tau_max": 1.0,
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| 44 |
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"final_from": "blend_0.5",
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"n_samples": 256,
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"seed": 20260522
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},
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"raw_genppl": {
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| 49 |
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"ppl": 37.067606022965414,
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"nll_per_token": 3.6127434351734498,
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"tokens": 30524,
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"kept_samples": 256,
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"total_samples": 256,
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"empty_rate": 0.0,
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"skipped_samples": 0
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},
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"stripped_genppl": {
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"ppl": 48.49552325374488,
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"nll_per_token": 3.8814714896366596,
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"tokens": 25687,
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"kept_samples": 256,
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"total_samples": 256,
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"empty_rate": 0.0,
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"skipped_samples": 0
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},
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"diversity": {
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"sample_entropy": 3.1397080459572364,
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"unique_tokens": 1860,
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"token_count": 32768,
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"distinct_1": 0.0567626953125,
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"distinct_2": 0.2785740649606299,
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"top_token_mass": 0.2530517578125
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}
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}
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[done] docs/lta_samples/metrics_20260522/lm1b_len128_lognormal_atoms_every1k_logistic_normal_sde_t1p45_steps128_n256/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0037000/sde_steps128_samples256_scored.jsonl
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[watch-lognormal-sde] 2026-05-23_02:02:31 done step_0037000
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LTA_openwebtext_dualt/logs/lm1b_len128_lognormal_atoms_sde_watch/infer_lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522_step_0055000_logistic_normal_t1p45.log
ADDED
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| 1 |
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[watch-lognormal-sde] 2026-05-23_03:41:01 infer runs/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0055000.pt -> docs/lta_samples/metrics_20260522/lm1b_len128_lognormal_atoms_every1k_logistic_normal_sde_t1p45_steps128_n256/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0055000
|
| 2 |
+
[load] runs/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0055000.pt
|
| 3 |
+
[ckpt] step=55000
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| 4 |
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[sde] generated 16/256
|
| 5 |
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[sde] generated 32/256
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| 6 |
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[sde] generated 48/256
|
| 7 |
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[sde] generated 64/256
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| 8 |
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[sde] generated 80/256
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| 9 |
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[sde] generated 96/256
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| 10 |
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[sde] generated 112/256
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| 11 |
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[sde] generated 128/256
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| 12 |
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[sde] generated 144/256
|
| 13 |
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[sde] generated 160/256
|
| 14 |
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[sde] generated 176/256
|
| 15 |
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[sde] generated 192/256
|
| 16 |
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[sde] generated 208/256
|
| 17 |
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[sde] generated 224/256
|
| 18 |
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[sde] generated 240/256
|
| 19 |
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[sde] generated 256/256
|
| 20 |
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[score] loading scorer: /e2e-data/evad-tech-vla/wanghan58/models/flowtext_scorers/gpt2-large-standard
|
| 21 |
+
[summary] {
|
| 22 |
+
"type": "summary",
|
| 23 |
+
"checkpoint": "runs/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0055000.pt",
|
| 24 |
+
"step": 55000,
|
| 25 |
+
"decode": {
|
| 26 |
+
"decode_rule": "logistic_normal_resample_sde",
|
| 27 |
+
"steps": 128,
|
| 28 |
+
"model_t_mode": "const0.5",
|
| 29 |
+
"mean_mode": "anchor_semantic",
|
| 30 |
+
"endpoint_floor": 0.0,
|
| 31 |
+
"concentration_min": 1.0,
|
| 32 |
+
"concentration_max": 1024.0,
|
| 33 |
+
"endpoint_temp": 1.45,
|
| 34 |
+
"support_power": 1.0,
|
| 35 |
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"semantic_power": 1.0,
|
| 36 |
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"noise_init": "logistic_normal",
|
| 37 |
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"noise_sigma": 3.0,
|
| 38 |
+
"noise_dirichlet_concentration": 1.0,
|
| 39 |
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"sde_resample": "logistic_normal",
|
| 40 |
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"logistic_normal_sigma_min": 0.18,
|
| 41 |
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"logistic_normal_sigma_max": 3.0,
|
| 42 |
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"logistic_normal_tau_min": 0.65,
|
| 43 |
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"logistic_normal_tau_max": 1.0,
|
| 44 |
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"final_from": "blend_0.5",
|
| 45 |
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"n_samples": 256,
|
| 46 |
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"seed": 20260522
|
| 47 |
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},
|
| 48 |
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"raw_genppl": {
|
| 49 |
+
"ppl": 20.48864099827913,
|
| 50 |
+
"nll_per_token": 3.0198706349306113,
|
| 51 |
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"tokens": 31075,
|
| 52 |
+
"kept_samples": 256,
|
| 53 |
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"total_samples": 256,
|
| 54 |
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"empty_rate": 0.0,
|
| 55 |
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"skipped_samples": 0
|
| 56 |
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},
|
| 57 |
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"stripped_genppl": {
|
| 58 |
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"ppl": 20.39658888593573,
|
| 59 |
+
"nll_per_token": 3.015367675395035,
|
| 60 |
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"tokens": 27814,
|
| 61 |
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"kept_samples": 256,
|
| 62 |
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"total_samples": 256,
|
| 63 |
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"empty_rate": 0.0,
|
| 64 |
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"skipped_samples": 0
|
| 65 |
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},
|
| 66 |
+
"diversity": {
|
| 67 |
+
"sample_entropy": 2.5694837759949234,
|
| 68 |
+
"unique_tokens": 1321,
|
| 69 |
+
"token_count": 32768,
|
| 70 |
+
"distinct_1": 0.040313720703125,
|
| 71 |
+
"distinct_2": 0.19725024606299213,
|
| 72 |
+
"top_token_mass": 0.27593994140625
|
| 73 |
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}
|
| 74 |
+
}
|
| 75 |
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[done] docs/lta_samples/metrics_20260522/lm1b_len128_lognormal_atoms_every1k_logistic_normal_sde_t1p45_steps128_n256/lta_lm1b_classic_c1024_len128_lognormalatoms_gbs512_4gpu_20260522/step_0055000/sde_steps128_samples256_scored.jsonl
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| 76 |
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[watch-lognormal-sde] 2026-05-23_03:42:28 done step_0055000
|
LTA_openwebtext_dualt/mini_owt_fit/logs/mini_owt_fit_bert_len1024_C1_to_1024_absrope_time4_d768_l12_h12_full_gbs512_8gpu_20260526_151837.log
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W0526 15:18:38.686000 10232 torch/distributed/run.py:792]
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W0526 15:18:38.686000 10232 torch/distributed/run.py:792] *****************************************
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W0526 15:18:38.686000 10232 torch/distributed/run.py:792] Setting OMP_NUM_THREADS environment variable for each process to be 1 in default, to avoid your system being overloaded, please further tune the variable for optimal performance in your application as needed.
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W0526 15:18:38.686000 10232 torch/distributed/run.py:792] *****************************************
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skipping len=623 text='WHAT?!??! I know. That’s what you’re saying right '
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skipping len=767 text='A notorious protester convicted of wilfully promot'
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skipping len=610 text='Today, Toyota announced changes in executives’ are'
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skipping len=844 text='North Korean leader Kim Jong Un. AP Images / Busin'
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skipping len=1015 text='We’ve always pictured Scandinavia as the home of g'
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skipping len=250 text='There’s measuring the drapes, and then there’s mea'
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skipping len=530 text='Attention! This news was published on the old vers'
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| 23 |
+
skipping len=943 text='The Ice Light is “a portable, dimmable, daylight b'
|
| 24 |
+
skipping len=188 text='A Wall Street sign is displayed in front of the Ne'
|
| 25 |
+
[data] seen=10000 kept=3124 dropped=6876
|
| 26 |
+
[data] seen=20000 kept=6318 dropped=13682
|
| 27 |
+
[data] seen=30000 kept=9522 dropped=20478
|
| 28 |
+
[data] seen=40000 kept=12678 dropped=27322
|
| 29 |
+
[data] seen=50000 kept=15884 dropped=34116
|
| 30 |
+
[data] seen=60000 kept=19035 dropped=40965
|
| 31 |
+
[data] seen=70000 kept=22161 dropped=47839
|
| 32 |
+
[data] seen=80000 kept=25353 dropped=54647
|
| 33 |
+
[data] seen=90000 kept=28533 dropped=61467
|
| 34 |
+
[data] seen=100000 kept=31656 dropped=68344
|
| 35 |
+
[data] seen=110000 kept=34893 dropped=75107
|
| 36 |
+
[data] seen=120000 kept=38138 dropped=81862
|
| 37 |
+
[data] seen=130000 kept=41380 dropped=88620
|
| 38 |
+
[data] seen=140000 kept=44554 dropped=95446
|
| 39 |
+
[data] seen=150000 kept=47806 dropped=102194
|
| 40 |
+
[data] seen=160000 kept=51016 dropped=108984
|
| 41 |
+
[data] seen=170000 kept=54156 dropped=115844
|
| 42 |
+
[data] seen=180000 kept=57380 dropped=122620
|
| 43 |
+
[data] seen=190000 kept=60576 dropped=129424
|
| 44 |
+
[data] seen=200000 kept=63722 dropped=136278
|
| 45 |
+
[data] seen=210000 kept=66866 dropped=143134
|
| 46 |
+
[data] seen=220000 kept=70014 dropped=149986
|
| 47 |
+
[data] seen=230000 kept=73202 dropped=156798
|
| 48 |
+
[data] seen=240000 kept=76353 dropped=163647
|
LTA_openwebtext_dualt/mini_owt_fit/logs/mini_owt_fit_t5_bernoulliwrong_len1024_bos_eos_C1_to_1024_absrope_time4_d768_l12_h12_native_nofloor_full_gbs512_8gpu_20260527_081554.log
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/activate
ADDED
|
@@ -0,0 +1,130 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright (c) 2020-202x The virtualenv developers
|
| 2 |
+
#
|
| 3 |
+
# Permission is hereby granted, free of charge, to any person obtaining
|
| 4 |
+
# a copy of this software and associated documentation files (the
|
| 5 |
+
# "Software"), to deal in the Software without restriction, including
|
| 6 |
+
# without limitation the rights to use, copy, modify, merge, publish,
|
| 7 |
+
# distribute, sublicense, and/or sell copies of the Software, and to
|
| 8 |
+
# permit persons to whom the Software is furnished to do so, subject to
|
| 9 |
+
# the following conditions:
|
| 10 |
+
#
|
| 11 |
+
# The above copyright notice and this permission notice shall be
|
| 12 |
+
# included in all copies or substantial portions of the Software.
|
| 13 |
+
#
|
| 14 |
+
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
|
| 15 |
+
# EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
|
| 16 |
+
# MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
|
| 17 |
+
# NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
|
| 18 |
+
# LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
|
| 19 |
+
# OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
|
| 20 |
+
# WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
|
| 21 |
+
|
| 22 |
+
# This file must be used with "source bin/activate" *from bash*
|
| 23 |
+
# you cannot run it directly
|
| 24 |
+
|
| 25 |
+
if ! [ -z "${SCRIPT_PATH+_}" ] ; then
|
| 26 |
+
_OLD_SCRIPT_PATH="$SCRIPT_PATH"
|
| 27 |
+
fi
|
| 28 |
+
|
| 29 |
+
# Get script path (only used if environment is relocatable).
|
| 30 |
+
if [ -n "${BASH_VERSION:+x}" ] ; then
|
| 31 |
+
SCRIPT_PATH="${BASH_SOURCE[0]}"
|
| 32 |
+
if [ "$SCRIPT_PATH" = "$0" ]; then
|
| 33 |
+
# Only bash has a reasonably robust check for source'dness.
|
| 34 |
+
echo "You must source this script: \$ source $0" >&2
|
| 35 |
+
exit 33
|
| 36 |
+
fi
|
| 37 |
+
elif [ -n "${ZSH_VERSION:+x}" ] ; then
|
| 38 |
+
SCRIPT_PATH="${(%):-%x}"
|
| 39 |
+
elif [ -n "${KSH_VERSION:+x}" ] ; then
|
| 40 |
+
SCRIPT_PATH="${.sh.file}"
|
| 41 |
+
fi
|
| 42 |
+
|
| 43 |
+
deactivate () {
|
| 44 |
+
unset -f pydoc >/dev/null 2>&1 || true
|
| 45 |
+
|
| 46 |
+
# reset old environment variables
|
| 47 |
+
# ! [ -z ${VAR+_} ] returns true if VAR is declared at all
|
| 48 |
+
if ! [ -z "${_OLD_VIRTUAL_PATH:+_}" ] ; then
|
| 49 |
+
PATH="$_OLD_VIRTUAL_PATH"
|
| 50 |
+
export PATH
|
| 51 |
+
unset _OLD_VIRTUAL_PATH
|
| 52 |
+
fi
|
| 53 |
+
if ! [ -z "${_OLD_VIRTUAL_PYTHONHOME+_}" ] ; then
|
| 54 |
+
PYTHONHOME="$_OLD_VIRTUAL_PYTHONHOME"
|
| 55 |
+
export PYTHONHOME
|
| 56 |
+
unset _OLD_VIRTUAL_PYTHONHOME
|
| 57 |
+
fi
|
| 58 |
+
|
| 59 |
+
# The hash command must be called to get it to forget past
|
| 60 |
+
# commands. Without forgetting past commands the $PATH changes
|
| 61 |
+
# we made may not be respected
|
| 62 |
+
hash -r 2>/dev/null
|
| 63 |
+
|
| 64 |
+
if ! [ -z "${_OLD_VIRTUAL_PS1+_}" ] ; then
|
| 65 |
+
PS1="$_OLD_VIRTUAL_PS1"
|
| 66 |
+
export PS1
|
| 67 |
+
unset _OLD_VIRTUAL_PS1
|
| 68 |
+
fi
|
| 69 |
+
|
| 70 |
+
unset VIRTUAL_ENV
|
| 71 |
+
unset VIRTUAL_ENV_PROMPT
|
| 72 |
+
if [ ! "${1-}" = "nondestructive" ] ; then
|
| 73 |
+
# Self destruct!
|
| 74 |
+
unset -f deactivate
|
| 75 |
+
fi
|
| 76 |
+
}
|
| 77 |
+
|
| 78 |
+
# unset irrelevant variables
|
| 79 |
+
deactivate nondestructive
|
| 80 |
+
|
| 81 |
+
VIRTUAL_ENV='/e2e-data/evad-tech-vla/wanghan58/workspace/LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv'
|
| 82 |
+
if ([ "$OSTYPE" = "cygwin" ] || [ "$OSTYPE" = "msys" ]) && $(command -v cygpath &> /dev/null) ; then
|
| 83 |
+
VIRTUAL_ENV=$(cygpath -u "$VIRTUAL_ENV")
|
| 84 |
+
fi
|
| 85 |
+
export VIRTUAL_ENV
|
| 86 |
+
|
| 87 |
+
# Unset the `SCRIPT_PATH` variable, now that the `VIRTUAL_ENV` variable
|
| 88 |
+
# has been set. This is important for relocatable environments.
|
| 89 |
+
if ! [ -z "${_OLD_SCRIPT_PATH+_}" ] ; then
|
| 90 |
+
SCRIPT_PATH="$_OLD_SCRIPT_PATH"
|
| 91 |
+
export SCRIPT_PATH
|
| 92 |
+
unset _OLD_SCRIPT_PATH
|
| 93 |
+
else
|
| 94 |
+
unset SCRIPT_PATH
|
| 95 |
+
fi
|
| 96 |
+
|
| 97 |
+
_OLD_VIRTUAL_PATH="$PATH"
|
| 98 |
+
PATH="$VIRTUAL_ENV/bin:$PATH"
|
| 99 |
+
export PATH
|
| 100 |
+
|
| 101 |
+
if [ "x" != x ] ; then
|
| 102 |
+
VIRTUAL_ENV_PROMPT=""
|
| 103 |
+
else
|
| 104 |
+
VIRTUAL_ENV_PROMPT=$(basename "$VIRTUAL_ENV")
|
| 105 |
+
fi
|
| 106 |
+
export VIRTUAL_ENV_PROMPT
|
| 107 |
+
|
| 108 |
+
# unset PYTHONHOME if set
|
| 109 |
+
if ! [ -z "${PYTHONHOME+_}" ] ; then
|
| 110 |
+
_OLD_VIRTUAL_PYTHONHOME="$PYTHONHOME"
|
| 111 |
+
unset PYTHONHOME
|
| 112 |
+
fi
|
| 113 |
+
|
| 114 |
+
if [ -z "${VIRTUAL_ENV_DISABLE_PROMPT-}" ] ; then
|
| 115 |
+
_OLD_VIRTUAL_PS1="${PS1-}"
|
| 116 |
+
PS1="(${VIRTUAL_ENV_PROMPT}) ${PS1-}"
|
| 117 |
+
export PS1
|
| 118 |
+
fi
|
| 119 |
+
|
| 120 |
+
# Make sure to unalias pydoc if it's already there
|
| 121 |
+
alias pydoc 2>/dev/null >/dev/null && unalias pydoc || true
|
| 122 |
+
|
| 123 |
+
pydoc () {
|
| 124 |
+
python -m pydoc "$@"
|
| 125 |
+
}
|
| 126 |
+
|
| 127 |
+
# The hash command must be called to get it to forget past
|
| 128 |
+
# commands. Without forgetting past commands the $PATH changes
|
| 129 |
+
# we made may not be respected
|
| 130 |
+
hash -r 2>/dev/null || true
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/activate.ps1
ADDED
|
@@ -0,0 +1,82 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright (c) 2020-202x The virtualenv developers
|
| 2 |
+
#
|
| 3 |
+
# Permission is hereby granted, free of charge, to any person obtaining
|
| 4 |
+
# a copy of this software and associated documentation files (the
|
| 5 |
+
# "Software"), to deal in the Software without restriction, including
|
| 6 |
+
# without limitation the rights to use, copy, modify, merge, publish,
|
| 7 |
+
# distribute, sublicense, and/or sell copies of the Software, and to
|
| 8 |
+
# permit persons to whom the Software is furnished to do so, subject to
|
| 9 |
+
# the following conditions:
|
| 10 |
+
#
|
| 11 |
+
# The above copyright notice and this permission notice shall be
|
| 12 |
+
# included in all copies or substantial portions of the Software.
|
| 13 |
+
#
|
| 14 |
+
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
|
| 15 |
+
# EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
|
| 16 |
+
# MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
|
| 17 |
+
# NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
|
| 18 |
+
# LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
|
| 19 |
+
# OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
|
| 20 |
+
# WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
|
| 21 |
+
|
| 22 |
+
$script:THIS_PATH = $myinvocation.mycommand.path
|
| 23 |
+
$script:BASE_DIR = Split-Path (Resolve-Path "$THIS_PATH/..") -Parent
|
| 24 |
+
|
| 25 |
+
function global:deactivate([switch] $NonDestructive) {
|
| 26 |
+
if (Test-Path variable:_OLD_VIRTUAL_PATH) {
|
| 27 |
+
$env:PATH = $variable:_OLD_VIRTUAL_PATH
|
| 28 |
+
Remove-Variable "_OLD_VIRTUAL_PATH" -Scope global
|
| 29 |
+
}
|
| 30 |
+
|
| 31 |
+
if (Test-Path function:_old_virtual_prompt) {
|
| 32 |
+
$function:prompt = $function:_old_virtual_prompt
|
| 33 |
+
Remove-Item function:\_old_virtual_prompt
|
| 34 |
+
}
|
| 35 |
+
|
| 36 |
+
if ($env:VIRTUAL_ENV) {
|
| 37 |
+
Remove-Item env:VIRTUAL_ENV -ErrorAction SilentlyContinue
|
| 38 |
+
}
|
| 39 |
+
|
| 40 |
+
if ($env:VIRTUAL_ENV_PROMPT) {
|
| 41 |
+
Remove-Item env:VIRTUAL_ENV_PROMPT -ErrorAction SilentlyContinue
|
| 42 |
+
}
|
| 43 |
+
|
| 44 |
+
if (!$NonDestructive) {
|
| 45 |
+
# Self destruct!
|
| 46 |
+
Remove-Item function:deactivate
|
| 47 |
+
Remove-Item function:pydoc
|
| 48 |
+
}
|
| 49 |
+
}
|
| 50 |
+
|
| 51 |
+
function global:pydoc {
|
| 52 |
+
python -m pydoc $args
|
| 53 |
+
}
|
| 54 |
+
|
| 55 |
+
# unset irrelevant variables
|
| 56 |
+
deactivate -nondestructive
|
| 57 |
+
|
| 58 |
+
$VIRTUAL_ENV = $BASE_DIR
|
| 59 |
+
$env:VIRTUAL_ENV = $VIRTUAL_ENV
|
| 60 |
+
|
| 61 |
+
if ("" -ne "") {
|
| 62 |
+
$env:VIRTUAL_ENV_PROMPT = ""
|
| 63 |
+
}
|
| 64 |
+
else {
|
| 65 |
+
$env:VIRTUAL_ENV_PROMPT = $( Split-Path $env:VIRTUAL_ENV -Leaf )
|
| 66 |
+
}
|
| 67 |
+
|
| 68 |
+
New-Variable -Scope global -Name _OLD_VIRTUAL_PATH -Value $env:PATH
|
| 69 |
+
|
| 70 |
+
$env:PATH = "$env:VIRTUAL_ENV/bin:" + $env:PATH
|
| 71 |
+
if (!$env:VIRTUAL_ENV_DISABLE_PROMPT) {
|
| 72 |
+
function global:_old_virtual_prompt {
|
| 73 |
+
""
|
| 74 |
+
}
|
| 75 |
+
$function:_old_virtual_prompt = $function:prompt
|
| 76 |
+
|
| 77 |
+
function global:prompt {
|
| 78 |
+
# Add the custom prefix to the existing prompt
|
| 79 |
+
$previous_prompt_value = & $function:_old_virtual_prompt
|
| 80 |
+
("(" + $env:VIRTUAL_ENV_PROMPT + ") " + $previous_prompt_value)
|
| 81 |
+
}
|
| 82 |
+
}
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/activate_this.py
ADDED
|
@@ -0,0 +1,59 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright (c) 2020-202x The virtualenv developers
|
| 2 |
+
#
|
| 3 |
+
# Permission is hereby granted, free of charge, to any person obtaining
|
| 4 |
+
# a copy of this software and associated documentation files (the
|
| 5 |
+
# "Software"), to deal in the Software without restriction, including
|
| 6 |
+
# without limitation the rights to use, copy, modify, merge, publish,
|
| 7 |
+
# distribute, sublicense, and/or sell copies of the Software, and to
|
| 8 |
+
# permit persons to whom the Software is furnished to do so, subject to
|
| 9 |
+
# the following conditions:
|
| 10 |
+
#
|
| 11 |
+
# The above copyright notice and this permission notice shall be
|
| 12 |
+
# included in all copies or substantial portions of the Software.
|
| 13 |
+
#
|
| 14 |
+
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
|
| 15 |
+
# EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
|
| 16 |
+
# MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
|
| 17 |
+
# NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
|
| 18 |
+
# LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
|
| 19 |
+
# OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
|
| 20 |
+
# WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
|
| 21 |
+
|
| 22 |
+
"""
|
| 23 |
+
Activate virtualenv for current interpreter:
|
| 24 |
+
|
| 25 |
+
import runpy
|
| 26 |
+
runpy.run_path(this_file)
|
| 27 |
+
|
| 28 |
+
This can be used when you must use an existing Python interpreter, not the virtualenv bin/python.
|
| 29 |
+
""" # noqa: D415
|
| 30 |
+
|
| 31 |
+
from __future__ import annotations
|
| 32 |
+
|
| 33 |
+
import os
|
| 34 |
+
import site
|
| 35 |
+
import sys
|
| 36 |
+
|
| 37 |
+
try:
|
| 38 |
+
abs_file = os.path.abspath(__file__)
|
| 39 |
+
except NameError as exc:
|
| 40 |
+
msg = "You must use import runpy; runpy.run_path(this_file)"
|
| 41 |
+
raise AssertionError(msg) from exc
|
| 42 |
+
|
| 43 |
+
bin_dir = os.path.dirname(abs_file)
|
| 44 |
+
base = bin_dir[: -len("bin") - 1] # strip away the bin part from the __file__, plus the path separator
|
| 45 |
+
|
| 46 |
+
# prepend bin to PATH (this file is inside the bin directory)
|
| 47 |
+
os.environ["PATH"] = os.pathsep.join([bin_dir, *os.environ.get("PATH", "").split(os.pathsep)])
|
| 48 |
+
os.environ["VIRTUAL_ENV"] = base # virtual env is right above bin directory
|
| 49 |
+
os.environ["VIRTUAL_ENV_PROMPT"] = "" or os.path.basename(base) # noqa: SIM222
|
| 50 |
+
|
| 51 |
+
# add the virtual environments libraries to the host python import mechanism
|
| 52 |
+
prev_length = len(sys.path)
|
| 53 |
+
for lib in "../lib/python3.12/site-packages".split(os.pathsep):
|
| 54 |
+
path = os.path.realpath(os.path.join(bin_dir, lib))
|
| 55 |
+
site.addsitedir(path)
|
| 56 |
+
sys.path[:] = sys.path[prev_length:] + sys.path[0:prev_length]
|
| 57 |
+
|
| 58 |
+
sys.real_prefix = sys.prefix
|
| 59 |
+
sys.prefix = base
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/httpx
ADDED
|
@@ -0,0 +1,10 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
#!/e2e-data/evad-tech-vla/wanghan58/workspace/LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python3
|
| 2 |
+
# -*- coding: utf-8 -*-
|
| 3 |
+
import sys
|
| 4 |
+
from httpx import main
|
| 5 |
+
if __name__ == "__main__":
|
| 6 |
+
if sys.argv[0].endswith("-script.pyw"):
|
| 7 |
+
sys.argv[0] = sys.argv[0][:-11]
|
| 8 |
+
elif sys.argv[0].endswith(".exe"):
|
| 9 |
+
sys.argv[0] = sys.argv[0][:-4]
|
| 10 |
+
sys.exit(main())
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
/usr/bin/python
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python3.12
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
python
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/tiny-agents
ADDED
|
@@ -0,0 +1,10 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
#!/e2e-data/evad-tech-vla/wanghan58/workspace/LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python3
|
| 2 |
+
# -*- coding: utf-8 -*-
|
| 3 |
+
import sys
|
| 4 |
+
from huggingface_hub.inference._mcp.cli import app
|
| 5 |
+
if __name__ == "__main__":
|
| 6 |
+
if sys.argv[0].endswith("-script.pyw"):
|
| 7 |
+
sys.argv[0] = sys.argv[0][:-11]
|
| 8 |
+
elif sys.argv[0].endswith(".exe"):
|
| 9 |
+
sys.argv[0] = sys.argv[0][:-4]
|
| 10 |
+
sys.exit(app())
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/tqdm
ADDED
|
@@ -0,0 +1,10 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
#!/e2e-data/evad-tech-vla/wanghan58/workspace/LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/bin/python3
|
| 2 |
+
# -*- coding: utf-8 -*-
|
| 3 |
+
import sys
|
| 4 |
+
from tqdm.cli import main
|
| 5 |
+
if __name__ == "__main__":
|
| 6 |
+
if sys.argv[0].endswith("-script.pyw"):
|
| 7 |
+
sys.argv[0] = sys.argv[0][:-11]
|
| 8 |
+
elif sys.argv[0].endswith(".exe"):
|
| 9 |
+
sys.argv[0] = sys.argv[0][:-4]
|
| 10 |
+
sys.exit(main())
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/evolla/modular_evolla.py
ADDED
|
@@ -0,0 +1,893 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
# Copyright 2025 Westlake Representational Learning Lab (Fajie Yuan Lab) team and the HuggingFace Inc. team. All rights reserved.
|
| 2 |
+
#
|
| 3 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 4 |
+
# you may not use this file except in compliance with the License.
|
| 5 |
+
# You may obtain a copy of the License at
|
| 6 |
+
#
|
| 7 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 8 |
+
#
|
| 9 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 10 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 11 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 12 |
+
# See the License for the specific language governing permissions and
|
| 13 |
+
# limitations under the License.
|
| 14 |
+
|
| 15 |
+
from dataclasses import dataclass
|
| 16 |
+
|
| 17 |
+
import torch
|
| 18 |
+
from torch import nn
|
| 19 |
+
|
| 20 |
+
from ... import initialization as init
|
| 21 |
+
from ...cache_utils import Cache, DynamicCache
|
| 22 |
+
from ...generation import GenerationMixin
|
| 23 |
+
from ...masking_utils import create_bidirectional_mask, create_causal_mask
|
| 24 |
+
from ...modeling_outputs import (
|
| 25 |
+
BaseModelOutputWithPast,
|
| 26 |
+
BaseModelOutputWithPoolingAndCrossAttentions,
|
| 27 |
+
CausalLMOutputWithPast,
|
| 28 |
+
ModelOutput,
|
| 29 |
+
)
|
| 30 |
+
from ...modeling_utils import PreTrainedModel
|
| 31 |
+
from ...utils import (
|
| 32 |
+
auto_docstring,
|
| 33 |
+
can_return_tuple,
|
| 34 |
+
logging,
|
| 35 |
+
)
|
| 36 |
+
from ...utils.generic import merge_with_config_defaults
|
| 37 |
+
from ...utils.output_capturing import OutputRecorder, capture_outputs
|
| 38 |
+
from ..esm.modeling_esm import (
|
| 39 |
+
EsmAttention,
|
| 40 |
+
EsmEmbeddings,
|
| 41 |
+
EsmEncoder,
|
| 42 |
+
EsmIntermediate,
|
| 43 |
+
EsmLayer,
|
| 44 |
+
EsmOutput,
|
| 45 |
+
EsmPooler,
|
| 46 |
+
EsmRotaryEmbedding,
|
| 47 |
+
EsmSelfAttention,
|
| 48 |
+
EsmSelfOutput,
|
| 49 |
+
)
|
| 50 |
+
from ..llama.modeling_llama import (
|
| 51 |
+
LlamaAttention,
|
| 52 |
+
LlamaDecoderLayer,
|
| 53 |
+
LlamaMLP,
|
| 54 |
+
LlamaPreTrainedModel,
|
| 55 |
+
LlamaRMSNorm,
|
| 56 |
+
LlamaRotaryEmbedding,
|
| 57 |
+
)
|
| 58 |
+
from .configuration_evolla import EvollaConfig, SaProtConfig
|
| 59 |
+
|
| 60 |
+
|
| 61 |
+
logger = logging.get_logger(__name__)
|
| 62 |
+
|
| 63 |
+
|
| 64 |
+
class EvollaSaProtEmbeddings(EsmEmbeddings):
|
| 65 |
+
def __init__(self, config):
|
| 66 |
+
super().__init__(config)
|
| 67 |
+
# remove the position_ids in EsmEmbeddings
|
| 68 |
+
self.position_ids = None
|
| 69 |
+
|
| 70 |
+
|
| 71 |
+
class EvollaSaProtRotaryEmbedding(EsmRotaryEmbedding):
|
| 72 |
+
def __init__(self, config: SaProtConfig, device=None):
|
| 73 |
+
super().__init__(config, device)
|
| 74 |
+
|
| 75 |
+
@staticmethod
|
| 76 |
+
def compute_default_rope_parameters(
|
| 77 |
+
config: SaProtConfig | None = None,
|
| 78 |
+
device: "torch.device | None" = None,
|
| 79 |
+
seq_len: int | None = None,
|
| 80 |
+
) -> tuple["torch.Tensor", float]:
|
| 81 |
+
return super().compute_default_rope_parameters(config, device, seq_len)
|
| 82 |
+
|
| 83 |
+
|
| 84 |
+
class EvollaSaProtSelfAttention(EsmSelfAttention):
|
| 85 |
+
pass
|
| 86 |
+
|
| 87 |
+
|
| 88 |
+
class EvollaSaProtSelfOutput(EsmSelfOutput):
|
| 89 |
+
pass
|
| 90 |
+
|
| 91 |
+
|
| 92 |
+
class EvollaSaProtAttention(EsmAttention):
|
| 93 |
+
pass
|
| 94 |
+
|
| 95 |
+
|
| 96 |
+
class EvollaSaProtIntermediate(EsmIntermediate):
|
| 97 |
+
pass
|
| 98 |
+
|
| 99 |
+
|
| 100 |
+
class EvollaSaProtOutput(EsmOutput):
|
| 101 |
+
pass
|
| 102 |
+
|
| 103 |
+
|
| 104 |
+
class EvollaSaProtLayer(EsmLayer):
|
| 105 |
+
pass
|
| 106 |
+
|
| 107 |
+
|
| 108 |
+
class EvollaSaProtEncoder(EsmEncoder):
|
| 109 |
+
pass
|
| 110 |
+
|
| 111 |
+
|
| 112 |
+
class EvollaSaProtPooler(EsmPooler):
|
| 113 |
+
pass
|
| 114 |
+
|
| 115 |
+
|
| 116 |
+
@auto_docstring
|
| 117 |
+
class EvollaSaProtPreTrainedModel(PreTrainedModel):
|
| 118 |
+
config: SaProtConfig
|
| 119 |
+
_no_split_modules = ["EvollaSaProtLayer"]
|
| 120 |
+
_supports_flash_attn = True
|
| 121 |
+
_supports_sdpa = True
|
| 122 |
+
_supports_flex_attn = True
|
| 123 |
+
_supports_attention_backend = True
|
| 124 |
+
|
| 125 |
+
_can_record_outputs = {
|
| 126 |
+
"hidden_states": EvollaSaProtLayer,
|
| 127 |
+
"attentions": [OutputRecorder(EvollaSaProtSelfAttention, index=1, layer_name="attention")],
|
| 128 |
+
"cross_attentions": [
|
| 129 |
+
OutputRecorder(EvollaSaProtSelfAttention, index=1, layer_name="crossattention"),
|
| 130 |
+
],
|
| 131 |
+
}
|
| 132 |
+
|
| 133 |
+
@torch.no_grad()
|
| 134 |
+
def _init_weights(self, module):
|
| 135 |
+
super()._init_weights(module)
|
| 136 |
+
if isinstance(module, EvollaSaProtRotaryEmbedding):
|
| 137 |
+
curr_inv_freq, _ = module.compute_default_rope_parameters(module.config)
|
| 138 |
+
init.copy_(getattr(module, "inv_freq"), curr_inv_freq)
|
| 139 |
+
|
| 140 |
+
|
| 141 |
+
class EvollaSaProtProteinEncoder(EvollaSaProtPreTrainedModel):
|
| 142 |
+
def __init__(self, config: SaProtConfig):
|
| 143 |
+
super().__init__(config)
|
| 144 |
+
self.embeddings = EvollaSaProtEmbeddings(config)
|
| 145 |
+
self.rotary_embeddings = EvollaSaProtRotaryEmbedding(config=config)
|
| 146 |
+
self.encoder = EvollaSaProtEncoder(config)
|
| 147 |
+
self.post_init()
|
| 148 |
+
|
| 149 |
+
def get_input_embeddings(self):
|
| 150 |
+
return self.embeddings.word_embeddings
|
| 151 |
+
|
| 152 |
+
def set_input_embeddings(self, value):
|
| 153 |
+
self.embeddings.word_embeddings = value
|
| 154 |
+
|
| 155 |
+
@merge_with_config_defaults
|
| 156 |
+
@capture_outputs
|
| 157 |
+
def forward(
|
| 158 |
+
self,
|
| 159 |
+
input_ids: torch.Tensor | None,
|
| 160 |
+
attention_mask: torch.Tensor | None = None,
|
| 161 |
+
**kwargs,
|
| 162 |
+
) -> tuple[torch.Tensor] | BaseModelOutputWithPoolingAndCrossAttentions:
|
| 163 |
+
input_shape = input_ids.size()
|
| 164 |
+
batch_size, seq_length = input_shape
|
| 165 |
+
|
| 166 |
+
device = input_ids.device
|
| 167 |
+
if attention_mask is None:
|
| 168 |
+
attention_mask = torch.ones(((batch_size, seq_length)), device=device)
|
| 169 |
+
inputs_embeds = self.embeddings(input_ids=input_ids, attention_mask=attention_mask)
|
| 170 |
+
|
| 171 |
+
attention_mask = create_bidirectional_mask(
|
| 172 |
+
config=self.config,
|
| 173 |
+
inputs_embeds=inputs_embeds,
|
| 174 |
+
attention_mask=attention_mask,
|
| 175 |
+
)
|
| 176 |
+
|
| 177 |
+
position_ids = torch.arange(seq_length, device=device).unsqueeze(0)
|
| 178 |
+
position_embeddings = self.rotary_embeddings(inputs_embeds, position_ids)
|
| 179 |
+
|
| 180 |
+
encoder_outputs = self.encoder(
|
| 181 |
+
inputs_embeds, attention_mask=attention_mask, position_embeddings=position_embeddings, **kwargs
|
| 182 |
+
)
|
| 183 |
+
sequence_output = encoder_outputs[0]
|
| 184 |
+
|
| 185 |
+
return BaseModelOutputWithPoolingAndCrossAttentions(
|
| 186 |
+
last_hidden_state=sequence_output,
|
| 187 |
+
hidden_states=encoder_outputs.hidden_states,
|
| 188 |
+
attentions=encoder_outputs.attentions,
|
| 189 |
+
cross_attentions=encoder_outputs.cross_attentions,
|
| 190 |
+
)
|
| 191 |
+
|
| 192 |
+
|
| 193 |
+
class EvollaSequenceCompressorAttention(nn.Module):
|
| 194 |
+
def __init__(self, dim, dim_head=64, heads=8):
|
| 195 |
+
super().__init__()
|
| 196 |
+
self.scale = dim_head**-0.5
|
| 197 |
+
self.heads = heads
|
| 198 |
+
inner_dim = dim_head * heads
|
| 199 |
+
|
| 200 |
+
self.norm_media = nn.LayerNorm(dim)
|
| 201 |
+
self.norm_latents = nn.LayerNorm(dim)
|
| 202 |
+
|
| 203 |
+
self.to_q = nn.Linear(dim, inner_dim, bias=False)
|
| 204 |
+
self.to_kv = nn.Linear(dim, inner_dim * 2, bias=False)
|
| 205 |
+
self.to_out = nn.Linear(inner_dim, dim, bias=False)
|
| 206 |
+
|
| 207 |
+
def forward(self, x, latents, mask):
|
| 208 |
+
"""
|
| 209 |
+
Args:
|
| 210 |
+
x (torch.Tensor): image features
|
| 211 |
+
shape (b, n1, D)
|
| 212 |
+
latent (torch.Tensor): latent features
|
| 213 |
+
shape (b, n2, D); n2: num of latent tokens
|
| 214 |
+
"""
|
| 215 |
+
x = self.norm_media(x)
|
| 216 |
+
latents = self.norm_latents(latents)
|
| 217 |
+
|
| 218 |
+
h = self.heads
|
| 219 |
+
|
| 220 |
+
q = self.to_q(latents)
|
| 221 |
+
kv_input = torch.cat((x, latents), dim=-2)
|
| 222 |
+
k, v = self.to_kv(kv_input).chunk(
|
| 223 |
+
2, dim=-1
|
| 224 |
+
) # each: batch_size, max_protein_length+num_latents, dim_head*num_heads
|
| 225 |
+
|
| 226 |
+
q = q.view(q.size(0), q.size(1), h, -1).permute(0, 2, 1, 3)
|
| 227 |
+
k = k.view(k.size(0), k.size(1), h, -1).permute(0, 2, 1, 3)
|
| 228 |
+
v = v.view(v.size(0), v.size(1), h, -1).permute(0, 2, 1, 3)
|
| 229 |
+
q = q * self.scale # batch_size, num_heads, num_latents, dim_head
|
| 230 |
+
|
| 231 |
+
# attention
|
| 232 |
+
sim = torch.matmul(q, k.transpose(-1, -2))
|
| 233 |
+
sim = sim - sim.amax(dim=-1, keepdim=True).detach()
|
| 234 |
+
bs, nh, skd, okd = sim.shape
|
| 235 |
+
ones = torch.ones(nh, skd).to(mask.device) # Create a tensor of ones with shape (nh, skd)
|
| 236 |
+
mask_exp = mask[:, None, None, :]
|
| 237 |
+
ones_exp = ones[None, :, :, None]
|
| 238 |
+
mask = mask_exp * ones_exp
|
| 239 |
+
|
| 240 |
+
sim = sim.masked_fill((1 - mask).bool(), -1e4)
|
| 241 |
+
attn = sim.softmax(dim=-1)
|
| 242 |
+
out = torch.matmul(attn, v)
|
| 243 |
+
out = out.permute(0, 2, 1, 3)
|
| 244 |
+
|
| 245 |
+
# [batch, seq, head, features] -> [batch, seq, head*features]
|
| 246 |
+
out = out.reshape(out.size(0), out.size(1), -1)
|
| 247 |
+
|
| 248 |
+
return self.to_out(out)
|
| 249 |
+
|
| 250 |
+
|
| 251 |
+
class EvollaFeedForward(nn.Module):
|
| 252 |
+
def __init__(self, dim, mult=4):
|
| 253 |
+
super().__init__()
|
| 254 |
+
inner_dim = int(dim * mult)
|
| 255 |
+
|
| 256 |
+
self.norm = nn.LayerNorm(dim)
|
| 257 |
+
self.fc1 = nn.Linear(dim, inner_dim, bias=False)
|
| 258 |
+
self.activation = nn.GELU()
|
| 259 |
+
self.fc2 = nn.Linear(inner_dim, dim, bias=False)
|
| 260 |
+
|
| 261 |
+
def forward(self, x):
|
| 262 |
+
return self.fc2(self.activation(self.fc1(self.norm(x))))
|
| 263 |
+
|
| 264 |
+
|
| 265 |
+
class EvollaSequenceCompressorResampler(nn.Module):
|
| 266 |
+
def __init__(self, config: EvollaConfig):
|
| 267 |
+
super().__init__()
|
| 268 |
+
protein_repr_dim = config.protein_encoder_config.hidden_size
|
| 269 |
+
self.num_latents = config.resampler_num_latents
|
| 270 |
+
self.latents = nn.Parameter(torch.randn(self.num_latents, protein_repr_dim), requires_grad=True)
|
| 271 |
+
self.layers = nn.ModuleList([])
|
| 272 |
+
for _ in range(config.resampler_depth):
|
| 273 |
+
self.layers.append(
|
| 274 |
+
nn.ModuleList(
|
| 275 |
+
[
|
| 276 |
+
EvollaSequenceCompressorAttention(
|
| 277 |
+
dim=protein_repr_dim, dim_head=config.resampler_dim_head, heads=config.resampler_heads
|
| 278 |
+
),
|
| 279 |
+
EvollaFeedForward(dim=protein_repr_dim, mult=config.resampler_ff_mult),
|
| 280 |
+
]
|
| 281 |
+
)
|
| 282 |
+
)
|
| 283 |
+
|
| 284 |
+
self.norm = nn.LayerNorm(config.hidden_size)
|
| 285 |
+
self.protein_projector = nn.Linear(protein_repr_dim, config.hidden_size)
|
| 286 |
+
|
| 287 |
+
def forward(self, embeds, mask):
|
| 288 |
+
b = embeds.shape[0]
|
| 289 |
+
|
| 290 |
+
bs, _ = mask.shape # bs, max_protein_length
|
| 291 |
+
latent_mask = torch.ones(bs, self.num_latents).to(mask.device)
|
| 292 |
+
mask = torch.cat((mask, latent_mask), dim=1) # bs, max_protein_length + num_latents
|
| 293 |
+
|
| 294 |
+
# blocks
|
| 295 |
+
ones = torch.ones(b).to(self.latents.device)
|
| 296 |
+
latents = self.latents[None] * ones.view(-1, 1, 1) # [b,n,d]
|
| 297 |
+
latents = latents.to(embeds.dtype)
|
| 298 |
+
for attn, ff in self.layers:
|
| 299 |
+
latents = attn(embeds, latents, mask) + latents
|
| 300 |
+
latents = ff(latents) + latents
|
| 301 |
+
|
| 302 |
+
transformed_feature = self.protein_projector(latents)
|
| 303 |
+
|
| 304 |
+
return self.norm(transformed_feature)
|
| 305 |
+
|
| 306 |
+
|
| 307 |
+
@auto_docstring
|
| 308 |
+
@dataclass
|
| 309 |
+
class EvollaProteinEncoderModelOutput(ModelOutput):
|
| 310 |
+
r"""
|
| 311 |
+
sequence_compressor_output (`torch.FloatTensor` of shape `(batch_size, compressed_seq_len, hidden_size)`, *optional*):
|
| 312 |
+
Compressed sequence representation produced by the sequence compressor module. The sequence length is
|
| 313 |
+
reduced from the original input length to `compressed_seq_len` via learned compression.
|
| 314 |
+
"""
|
| 315 |
+
|
| 316 |
+
sequence_compressor_output: torch.FloatTensor | None = None
|
| 317 |
+
last_hidden_state: torch.FloatTensor | None = None
|
| 318 |
+
hidden_states: tuple[torch.FloatTensor, ...] | None = None
|
| 319 |
+
attentions: tuple[torch.FloatTensor, ...] | None = None
|
| 320 |
+
|
| 321 |
+
|
| 322 |
+
class EvollaProteinEncoder(nn.Module):
|
| 323 |
+
def __init__(self, config: EvollaConfig):
|
| 324 |
+
super().__init__()
|
| 325 |
+
self.model = EvollaSaProtProteinEncoder(config=config.protein_encoder_config)
|
| 326 |
+
self.sequence_compressor_resampler = EvollaSequenceCompressorResampler(config=config)
|
| 327 |
+
|
| 328 |
+
@can_return_tuple
|
| 329 |
+
def forward(self, input_ids: torch.LongTensor, attention_mask: torch.FloatTensor, **kwargs):
|
| 330 |
+
protein_output = self.model(input_ids=input_ids, attention_mask=attention_mask)
|
| 331 |
+
protein_embeds = protein_output.last_hidden_state
|
| 332 |
+
sequence_repr = self.sequence_compressor_resampler(protein_embeds, attention_mask)
|
| 333 |
+
|
| 334 |
+
return EvollaProteinEncoderModelOutput(
|
| 335 |
+
sequence_compressor_output=sequence_repr,
|
| 336 |
+
last_hidden_state=protein_output.last_hidden_state,
|
| 337 |
+
)
|
| 338 |
+
|
| 339 |
+
|
| 340 |
+
class EvollaSequenceAlignerCrossAttention(nn.Module):
|
| 341 |
+
def __init__(
|
| 342 |
+
self,
|
| 343 |
+
config,
|
| 344 |
+
protein_encoder_dim: int | None = None,
|
| 345 |
+
structure_encoder_dim: int | None = None,
|
| 346 |
+
msa_encoder_dim: int | None = None,
|
| 347 |
+
):
|
| 348 |
+
super().__init__()
|
| 349 |
+
|
| 350 |
+
self.hidden_size = config.hidden_size
|
| 351 |
+
self.num_attention_heads = config.num_attention_heads
|
| 352 |
+
self.scale = self.num_attention_heads**-0.5
|
| 353 |
+
self.attention_head_size = int(self.hidden_size / self.num_attention_heads)
|
| 354 |
+
self.all_head_size = self.num_attention_heads * self.attention_head_size
|
| 355 |
+
|
| 356 |
+
attention_probs_dropout_prob = config.aligner_attention_probs_dropout_prob
|
| 357 |
+
enable_bias = config.aligner_enable_bias
|
| 358 |
+
ffn_mult = config.aligner_ffn_mult
|
| 359 |
+
|
| 360 |
+
self.query = nn.Linear(self.hidden_size, self.all_head_size)
|
| 361 |
+
if protein_encoder_dim is not None:
|
| 362 |
+
self.key_protein = nn.Linear(protein_encoder_dim, self.all_head_size)
|
| 363 |
+
self.value_protein = nn.Linear(protein_encoder_dim, self.all_head_size)
|
| 364 |
+
else:
|
| 365 |
+
self.key_protein = None
|
| 366 |
+
self.value_protein = None
|
| 367 |
+
|
| 368 |
+
if structure_encoder_dim is not None:
|
| 369 |
+
self.key_structure = nn.Linear(structure_encoder_dim, self.all_head_size)
|
| 370 |
+
self.value_structure = nn.Linear(structure_encoder_dim, self.all_head_size)
|
| 371 |
+
else:
|
| 372 |
+
self.key_structure = None
|
| 373 |
+
self.value_structure = None
|
| 374 |
+
|
| 375 |
+
if msa_encoder_dim is not None:
|
| 376 |
+
self.key_msa = nn.Linear(msa_encoder_dim, self.all_head_size)
|
| 377 |
+
self.value_msa = nn.Linear(msa_encoder_dim, self.all_head_size)
|
| 378 |
+
else:
|
| 379 |
+
self.key_msa = None
|
| 380 |
+
self.value_msa = None
|
| 381 |
+
|
| 382 |
+
self.attention_norm = EvollaRMSNorm(self.hidden_size)
|
| 383 |
+
|
| 384 |
+
self.dropout = nn.Dropout(attention_probs_dropout_prob)
|
| 385 |
+
|
| 386 |
+
self.out_proj = nn.Linear(self.hidden_size, self.hidden_size, bias=enable_bias)
|
| 387 |
+
|
| 388 |
+
self.ff = EvollaFeedForward(self.hidden_size, ffn_mult)
|
| 389 |
+
self.gate_attention = nn.Parameter(torch.tensor([0.0]))
|
| 390 |
+
self.gate_ffw = nn.Parameter(torch.tensor([0.0]))
|
| 391 |
+
|
| 392 |
+
def cross_attention(
|
| 393 |
+
self,
|
| 394 |
+
query_states,
|
| 395 |
+
protein_key_value_states,
|
| 396 |
+
structure_key_value_states,
|
| 397 |
+
msa_key_value_states,
|
| 398 |
+
query_attn_mask,
|
| 399 |
+
protein_kv_attn_mask,
|
| 400 |
+
structure_kv_attn_mask,
|
| 401 |
+
msa_kv_attn_mask,
|
| 402 |
+
):
|
| 403 |
+
"""
|
| 404 |
+
query_states: text
|
| 405 |
+
key_value_states: protein
|
| 406 |
+
query_states: [bs, query_seq_len, dim]
|
| 407 |
+
key_value_states: [bs, kv_seq_len, dim]
|
| 408 |
+
query_attn_mask: [bs, query_seq_len]
|
| 409 |
+
kv_attn_mask: [bs, kv_seq_len]
|
| 410 |
+
"""
|
| 411 |
+
|
| 412 |
+
# Concatenate protein and structure
|
| 413 |
+
kv_attn_mask = [protein_kv_attn_mask, structure_kv_attn_mask, msa_kv_attn_mask]
|
| 414 |
+
kv_attn_mask = [_ for _ in kv_attn_mask if _ is not None]
|
| 415 |
+
if not kv_attn_mask:
|
| 416 |
+
raise ValueError("At least one modality should be provided for cross attention.")
|
| 417 |
+
kv_attn_mask = torch.cat(kv_attn_mask, dim=1)
|
| 418 |
+
|
| 419 |
+
query_layer = self.attention_norm(query_states)
|
| 420 |
+
|
| 421 |
+
# Warning: This place might cause issues, refers to
|
| 422 |
+
# https://discuss.pytorch.org/t/cuda-error-cublas-status-not-supported-when-calling-cublasltmatmul-from-torch-nn-functional-linear/170214/13
|
| 423 |
+
# Solution: add `DISABLE_ADDMM_CUDA_LT=1` as environment variable
|
| 424 |
+
# Apply linear transformation to input_query, input_key, and input_value
|
| 425 |
+
query_layer = self.query(query_layer) # [bs, querylength, dim]
|
| 426 |
+
|
| 427 |
+
if self.key_protein is not None and self.value_protein is not None:
|
| 428 |
+
protein_key_value_states = protein_key_value_states.to(query_states)
|
| 429 |
+
key_layer_protein = self.key_protein(protein_key_value_states) # [bs, keylength, dim]
|
| 430 |
+
value_layer_protein = self.value_protein(protein_key_value_states) # [bs, keylength, dim]
|
| 431 |
+
else:
|
| 432 |
+
key_layer_protein = None
|
| 433 |
+
value_layer_protein = None
|
| 434 |
+
|
| 435 |
+
if self.key_structure is not None and self.value_structure is not None:
|
| 436 |
+
structure_key_value_states = structure_key_value_states.to(query_states)
|
| 437 |
+
key_layer_structure = self.key_structure(structure_key_value_states) # [bs, keylength, dim]
|
| 438 |
+
value_layer_structure = self.value_structure(structure_key_value_states) # [bs, keylength, dim]
|
| 439 |
+
else:
|
| 440 |
+
key_layer_structure = None
|
| 441 |
+
value_layer_structure = None
|
| 442 |
+
|
| 443 |
+
if self.key_msa is not None and self.value_msa is not None:
|
| 444 |
+
msa_key_value_states = msa_key_value_states.to(query_states)
|
| 445 |
+
key_layer_msa = self.key_msa(msa_key_value_states) # [bs, keylength, dim]
|
| 446 |
+
value_layer_msa = self.value_msa(msa_key_value_states) # [bs, keylength, dim]
|
| 447 |
+
else:
|
| 448 |
+
key_layer_msa = None
|
| 449 |
+
value_layer_msa = None
|
| 450 |
+
|
| 451 |
+
key_layer = [key_layer_protein, key_layer_structure, key_layer_msa]
|
| 452 |
+
key_layer = [_ for _ in key_layer if _ is not None]
|
| 453 |
+
key_layer = torch.cat(key_layer, dim=1)
|
| 454 |
+
|
| 455 |
+
value_layer = [value_layer_protein, value_layer_structure, value_layer_msa]
|
| 456 |
+
value_layer = [_ for _ in value_layer if _ is not None]
|
| 457 |
+
value_layer = torch.cat(value_layer, dim=1)
|
| 458 |
+
|
| 459 |
+
new_query_layer_shape = query_layer.size()[:-1] + (
|
| 460 |
+
self.num_attention_heads,
|
| 461 |
+
self.attention_head_size,
|
| 462 |
+
)
|
| 463 |
+
query_layer = query_layer.view(*new_query_layer_shape).permute(0, 2, 1, 3)
|
| 464 |
+
|
| 465 |
+
new_key_layer_shape = key_layer.size()[:-1] + (
|
| 466 |
+
self.num_attention_heads,
|
| 467 |
+
self.attention_head_size,
|
| 468 |
+
)
|
| 469 |
+
key_layer = key_layer.view(*new_key_layer_shape).permute(0, 2, 1, 3)
|
| 470 |
+
|
| 471 |
+
new_value_layer_shape = value_layer.size()[:-1] + (
|
| 472 |
+
self.num_attention_heads,
|
| 473 |
+
self.attention_head_size,
|
| 474 |
+
)
|
| 475 |
+
value_layer = value_layer.view(*new_value_layer_shape).permute(0, 2, 1, 3)
|
| 476 |
+
|
| 477 |
+
query_layer = query_layer * self.scale
|
| 478 |
+
|
| 479 |
+
# attention_mask: [bs, 1, querylength, keylength]
|
| 480 |
+
if query_attn_mask is None:
|
| 481 |
+
query_attn_mask = torch.ones(query_states.size(0), query_states.size(1)).to(query_states.device)
|
| 482 |
+
attention_mask = query_attn_mask[:, None, :, None] * kv_attn_mask[:, None, None, :]
|
| 483 |
+
# Compute the scaled dot-product attention scores
|
| 484 |
+
attn_weights = torch.matmul(query_layer, key_layer.transpose(-1, -2)) # [bs, numheads, querylength, keylength]
|
| 485 |
+
attn_weights = attn_weights - attn_weights.amax(dim=-1, keepdim=True).detach() # To stabilize score
|
| 486 |
+
attention_scores = attn_weights.masked_fill(
|
| 487 |
+
(1 - attention_mask).bool(), torch.finfo(attn_weights.dtype).min
|
| 488 |
+
) # [bs, numheads, querylength, keylength]
|
| 489 |
+
|
| 490 |
+
attention_probs = nn.Softmax(dim=-1)(attention_scores)
|
| 491 |
+
|
| 492 |
+
# attention_probs_dropped = self.dropout(attention_probs)
|
| 493 |
+
|
| 494 |
+
context_layer = torch.matmul(attention_probs, value_layer) # [bs, numheads, querylength, dim/numheads]
|
| 495 |
+
|
| 496 |
+
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
|
| 497 |
+
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
|
| 498 |
+
context_layer = context_layer.view(*new_context_layer_shape)
|
| 499 |
+
|
| 500 |
+
context_layer = self.out_proj(context_layer)
|
| 501 |
+
|
| 502 |
+
return context_layer
|
| 503 |
+
|
| 504 |
+
def forward(
|
| 505 |
+
self,
|
| 506 |
+
query_states,
|
| 507 |
+
protein_kv_states,
|
| 508 |
+
structure_kv_states,
|
| 509 |
+
msa_kv_states,
|
| 510 |
+
query_attn_mask,
|
| 511 |
+
protein_kv_attn_mask=None,
|
| 512 |
+
structure_kv_attn_mask=None,
|
| 513 |
+
msa_kv_attn_mask=None,
|
| 514 |
+
protein_batch_mask=None,
|
| 515 |
+
structure_batch_mask=None,
|
| 516 |
+
msa_batch_mask=None,
|
| 517 |
+
past_key_values=None,
|
| 518 |
+
):
|
| 519 |
+
if protein_kv_states is not None:
|
| 520 |
+
bs, protein_kv_seq_len, dim = protein_kv_states.shape
|
| 521 |
+
if protein_kv_attn_mask is None:
|
| 522 |
+
protein_kv_attn_mask = (
|
| 523 |
+
torch.ones(bs, protein_kv_seq_len).to(protein_batch_mask.device)
|
| 524 |
+
* protein_batch_mask.expand(size=(protein_kv_seq_len, bs)).T
|
| 525 |
+
).to(protein_kv_states.device)
|
| 526 |
+
else:
|
| 527 |
+
protein_kv_attn_mask = None
|
| 528 |
+
|
| 529 |
+
if structure_kv_states is not None:
|
| 530 |
+
bs, structure_kv_seq_len, dim = structure_kv_states.shape
|
| 531 |
+
if structure_kv_attn_mask is None:
|
| 532 |
+
structure_kv_attn_mask = (
|
| 533 |
+
torch.ones(bs, structure_kv_seq_len).to(protein_batch_mask.device)
|
| 534 |
+
* structure_batch_mask.expand(size=(structure_kv_seq_len, bs)).T
|
| 535 |
+
).to(structure_kv_states.device)
|
| 536 |
+
else:
|
| 537 |
+
structure_kv_attn_mask = None
|
| 538 |
+
|
| 539 |
+
if msa_kv_states is not None:
|
| 540 |
+
bs, msa_kv_seq_len, dim = msa_kv_states.shape
|
| 541 |
+
if msa_kv_attn_mask is None:
|
| 542 |
+
msa_kv_attn_mask = (
|
| 543 |
+
torch.ones(bs, msa_kv_seq_len).to(protein_batch_mask.device)
|
| 544 |
+
* msa_batch_mask.expand(size=(msa_kv_seq_len, bs)).T
|
| 545 |
+
).to(msa_kv_states.device)
|
| 546 |
+
else:
|
| 547 |
+
msa_kv_attn_mask = None
|
| 548 |
+
hidden_states = query_states
|
| 549 |
+
# only when there's at least one valid modality, crossattention will be performed
|
| 550 |
+
if (
|
| 551 |
+
(protein_kv_states is not None and protein_kv_attn_mask.any())
|
| 552 |
+
or (structure_kv_states is not None and structure_kv_attn_mask.any())
|
| 553 |
+
or (msa_kv_states is not None and msa_kv_attn_mask.any())
|
| 554 |
+
):
|
| 555 |
+
residual = hidden_states
|
| 556 |
+
hidden_states = self.cross_attention(
|
| 557 |
+
query_states=hidden_states,
|
| 558 |
+
protein_key_value_states=protein_kv_states,
|
| 559 |
+
structure_key_value_states=structure_kv_states,
|
| 560 |
+
msa_key_value_states=msa_kv_states,
|
| 561 |
+
query_attn_mask=query_attn_mask,
|
| 562 |
+
protein_kv_attn_mask=protein_kv_attn_mask,
|
| 563 |
+
structure_kv_attn_mask=structure_kv_attn_mask,
|
| 564 |
+
msa_kv_attn_mask=msa_kv_attn_mask,
|
| 565 |
+
) # [bs, query_seq_len, dim]
|
| 566 |
+
# tanh gate
|
| 567 |
+
hidden_states = torch.tanh(self.gate_attention) * hidden_states
|
| 568 |
+
|
| 569 |
+
hidden_states = residual + hidden_states # input_query
|
| 570 |
+
|
| 571 |
+
residual = hidden_states
|
| 572 |
+
hidden_states = self.ff(hidden_states) * torch.tanh(self.gate_ffw)
|
| 573 |
+
hidden_states = residual + hidden_states
|
| 574 |
+
|
| 575 |
+
return hidden_states
|
| 576 |
+
|
| 577 |
+
|
| 578 |
+
class EvollaRMSNorm(LlamaRMSNorm):
|
| 579 |
+
pass
|
| 580 |
+
|
| 581 |
+
|
| 582 |
+
class EvollaRotaryEmbedding(LlamaRotaryEmbedding):
|
| 583 |
+
pass
|
| 584 |
+
|
| 585 |
+
|
| 586 |
+
class EvollaMLP(LlamaMLP):
|
| 587 |
+
pass
|
| 588 |
+
|
| 589 |
+
|
| 590 |
+
class EvollaAttention(LlamaAttention):
|
| 591 |
+
pass
|
| 592 |
+
|
| 593 |
+
|
| 594 |
+
class EvollaDecoderLayer(LlamaDecoderLayer):
|
| 595 |
+
def __init__(self, config: EvollaConfig, layer_idx: int):
|
| 596 |
+
super().__init__(config, layer_idx)
|
| 597 |
+
if (layer_idx + 1) % max(config.num_hidden_layers // config.aligner_num_add_layers, 1) == 0:
|
| 598 |
+
self.adapter = EvollaSequenceAlignerCrossAttention(
|
| 599 |
+
config,
|
| 600 |
+
protein_encoder_dim=config.hidden_size,
|
| 601 |
+
)
|
| 602 |
+
|
| 603 |
+
def forward(
|
| 604 |
+
self,
|
| 605 |
+
hidden_states: torch.Tensor,
|
| 606 |
+
position_embeddings: tuple[torch.Tensor, torch.Tensor] | None = None,
|
| 607 |
+
attention_mask: torch.Tensor | None = None,
|
| 608 |
+
position_ids: torch.LongTensor | None = None,
|
| 609 |
+
past_key_values: Cache | None = None,
|
| 610 |
+
use_cache: bool | None = False,
|
| 611 |
+
protein_kv_states: torch.Tensor | None = None,
|
| 612 |
+
structure_kv_states: torch.Tensor | None = None,
|
| 613 |
+
msa_kv_states: torch.Tensor | None = None,
|
| 614 |
+
protein_batch_mask: torch.Tensor | None = None,
|
| 615 |
+
structure_batch_mask: torch.Tensor | None = None,
|
| 616 |
+
msa_batch_mask: torch.Tensor | None = None,
|
| 617 |
+
query_attn_mask: torch.Tensor | None = None,
|
| 618 |
+
**kwargs,
|
| 619 |
+
):
|
| 620 |
+
residual = hidden_states
|
| 621 |
+
|
| 622 |
+
hidden_states = self.input_layernorm(hidden_states)
|
| 623 |
+
|
| 624 |
+
# Self Attention
|
| 625 |
+
hidden_states, _ = self.self_attn(
|
| 626 |
+
hidden_states=hidden_states,
|
| 627 |
+
attention_mask=attention_mask,
|
| 628 |
+
position_ids=position_ids,
|
| 629 |
+
past_key_values=past_key_values,
|
| 630 |
+
use_cache=use_cache,
|
| 631 |
+
position_embeddings=position_embeddings,
|
| 632 |
+
**kwargs,
|
| 633 |
+
)
|
| 634 |
+
hidden_states = residual + hidden_states
|
| 635 |
+
|
| 636 |
+
# Fully Connected
|
| 637 |
+
residual = hidden_states
|
| 638 |
+
hidden_states = self.post_attention_layernorm(hidden_states)
|
| 639 |
+
hidden_states = self.mlp(hidden_states)
|
| 640 |
+
hidden_states = residual + hidden_states
|
| 641 |
+
|
| 642 |
+
if hasattr(self, "adapter"):
|
| 643 |
+
hidden_states = self.adapter(
|
| 644 |
+
query_states=hidden_states,
|
| 645 |
+
protein_kv_states=protein_kv_states,
|
| 646 |
+
structure_kv_states=structure_kv_states,
|
| 647 |
+
msa_kv_states=msa_kv_states,
|
| 648 |
+
query_attn_mask=query_attn_mask,
|
| 649 |
+
protein_batch_mask=protein_batch_mask,
|
| 650 |
+
structure_batch_mask=structure_batch_mask,
|
| 651 |
+
msa_batch_mask=msa_batch_mask,
|
| 652 |
+
)
|
| 653 |
+
|
| 654 |
+
return hidden_states
|
| 655 |
+
|
| 656 |
+
|
| 657 |
+
class EvollaPreTrainedModel(LlamaPreTrainedModel):
|
| 658 |
+
_supports_flash_attn = False # see dependency on `EvollaSequenceCompressorResampler`
|
| 659 |
+
_supports_flex_attn = False # see dependency on `EvollaSequenceCompressorResampler`
|
| 660 |
+
_supports_attention_backend = False
|
| 661 |
+
_no_split_modules = [
|
| 662 |
+
"EvollaDecoderLayer",
|
| 663 |
+
"EvollaSaProtLayer",
|
| 664 |
+
"EvollaSequenceCompressorResampler",
|
| 665 |
+
"EvollaSequenceAlignerCrossAttention",
|
| 666 |
+
]
|
| 667 |
+
|
| 668 |
+
@torch.no_grad()
|
| 669 |
+
def _init_weights(self, module):
|
| 670 |
+
std = self.config.initializer_range
|
| 671 |
+
PreTrainedModel._init_weights(self, module)
|
| 672 |
+
if isinstance(module, EvollaSequenceAlignerCrossAttention):
|
| 673 |
+
init.zeros_(module.gate_attention)
|
| 674 |
+
init.zeros_(module.gate_ffw)
|
| 675 |
+
init.ones_(module.attention_norm.weight)
|
| 676 |
+
elif isinstance(module, EvollaSequenceCompressorResampler):
|
| 677 |
+
init.normal_(module.latents, mean=0.0, std=std)
|
| 678 |
+
|
| 679 |
+
|
| 680 |
+
class EvollaModel(EvollaPreTrainedModel):
|
| 681 |
+
def __init__(self, config: EvollaConfig):
|
| 682 |
+
super().__init__(config)
|
| 683 |
+
self.padding_idx = config.pad_token_id
|
| 684 |
+
self.vocab_size = config.vocab_size
|
| 685 |
+
self.embed_tokens = nn.Embedding(self.vocab_size, config.hidden_size, self.padding_idx)
|
| 686 |
+
self.protein_encoder = EvollaProteinEncoder(config=config)
|
| 687 |
+
self.layers = nn.ModuleList(
|
| 688 |
+
[
|
| 689 |
+
EvollaDecoderLayer(
|
| 690 |
+
config=config,
|
| 691 |
+
layer_idx=layer_idx,
|
| 692 |
+
)
|
| 693 |
+
for layer_idx in range(config.num_hidden_layers)
|
| 694 |
+
]
|
| 695 |
+
)
|
| 696 |
+
|
| 697 |
+
self.norm = EvollaRMSNorm(config.hidden_size, eps=config.rms_norm_eps)
|
| 698 |
+
self.gradient_checkpointing = getattr(config, "gradient_checkpointing", False)
|
| 699 |
+
self.rotary_emb = EvollaRotaryEmbedding(config=config)
|
| 700 |
+
self.post_init()
|
| 701 |
+
|
| 702 |
+
def get_input_embeddings(self):
|
| 703 |
+
return self.embed_tokens
|
| 704 |
+
|
| 705 |
+
def set_input_embeddings(self, value):
|
| 706 |
+
self.embed_tokens = value
|
| 707 |
+
|
| 708 |
+
@auto_docstring
|
| 709 |
+
@merge_with_config_defaults
|
| 710 |
+
@capture_outputs
|
| 711 |
+
def forward(
|
| 712 |
+
self,
|
| 713 |
+
input_ids: torch.LongTensor | None = None,
|
| 714 |
+
attention_mask: torch.Tensor | None = None,
|
| 715 |
+
position_ids: torch.LongTensor | None = None,
|
| 716 |
+
past_key_values: Cache | None = None,
|
| 717 |
+
inputs_embeds: torch.FloatTensor | None = None,
|
| 718 |
+
use_cache: bool | None = None,
|
| 719 |
+
protein_input_ids: torch.LongTensor | None = None,
|
| 720 |
+
protein_attention_mask: torch.Tensor | None = None,
|
| 721 |
+
structure_feats: torch.FloatTensor | None = None,
|
| 722 |
+
msa_feats: torch.FloatTensor | None = None,
|
| 723 |
+
structure_batch_mask: torch.Tensor | None = None,
|
| 724 |
+
msa_batch_mask: torch.Tensor | None = None,
|
| 725 |
+
**kwargs,
|
| 726 |
+
) -> tuple | BaseModelOutputWithPast:
|
| 727 |
+
r"""
|
| 728 |
+
protein_input_ids (torch.LongTensor):
|
| 729 |
+
The input IDs for the protein sequence in structure-aware tokens. Should be of shape `(batch_size, protein_seq_length)` and type `torch.LongTensor`.
|
| 730 |
+
protein_attention_mask (torch.Tensor):
|
| 731 |
+
The attention mask for the protein sequence. Should be of shape `(batch_size, protein_seq_length)` and type `torch.Tensor`.
|
| 732 |
+
structure_feats (torch.FloatTensor):
|
| 733 |
+
The input IDs for purely structure-based features. Should be of shape `(batch_size, structure_seq_length, structure_feat_dim)` and type `torch.FloatTensor`. Dummy input for now.
|
| 734 |
+
msa_feats (torch.FloatTensor):
|
| 735 |
+
The input IDs for purely MSA-based features. Should be of shape `(batch_size, msa_seq_length, msa_feat_dim)` and type `torch.FloatTensor`. Dummy input for now.
|
| 736 |
+
structure_batch_mask (torch.Tensor):
|
| 737 |
+
The batch mask to decide which protein sequences are purely structure-based. Should be of shape `(batch_size)` and type `torch.Tensor`. Should be paired with `structure_feats`. Dummpy input for now.
|
| 738 |
+
msa_batch_mask (torch.Tensor):
|
| 739 |
+
The batch mask to decide which protein sequences are purely MSA-based. Should be of shape `(batch_size)` and type `torch.Tensor`. Should be paired with `msa_feats`. Dummpy input for now.
|
| 740 |
+
"""
|
| 741 |
+
if (input_ids is None) ^ (inputs_embeds is not None):
|
| 742 |
+
raise ValueError("You must specify exactly one of input_ids or inputs_embeds")
|
| 743 |
+
|
| 744 |
+
if inputs_embeds is None:
|
| 745 |
+
inputs_embeds = self.embed_tokens(input_ids)
|
| 746 |
+
|
| 747 |
+
if use_cache and past_key_values is None:
|
| 748 |
+
past_key_values = DynamicCache(config=self.config)
|
| 749 |
+
|
| 750 |
+
if position_ids is None:
|
| 751 |
+
past_seen_tokens = past_key_values.get_seq_length() if past_key_values is not None else 0
|
| 752 |
+
position_ids = torch.arange(inputs_embeds.shape[1], device=inputs_embeds.device) + past_seen_tokens
|
| 753 |
+
position_ids = position_ids.unsqueeze(0)
|
| 754 |
+
|
| 755 |
+
protein_feats = None
|
| 756 |
+
protein_batch_mask = None
|
| 757 |
+
# If provided, actually compute them
|
| 758 |
+
if protein_input_ids is not None and protein_attention_mask is not None:
|
| 759 |
+
protein_outputs = self.protein_encoder(
|
| 760 |
+
input_ids=protein_input_ids,
|
| 761 |
+
attention_mask=protein_attention_mask,
|
| 762 |
+
)
|
| 763 |
+
protein_feats = protein_outputs.sequence_compressor_output
|
| 764 |
+
protein_batch_mask = torch.ones(
|
| 765 |
+
protein_input_ids.shape[0],
|
| 766 |
+
device=protein_input_ids.device,
|
| 767 |
+
dtype=torch.bool,
|
| 768 |
+
)
|
| 769 |
+
|
| 770 |
+
causal_mask = create_causal_mask(
|
| 771 |
+
config=self.config,
|
| 772 |
+
inputs_embeds=inputs_embeds,
|
| 773 |
+
attention_mask=attention_mask,
|
| 774 |
+
past_key_values=past_key_values,
|
| 775 |
+
)
|
| 776 |
+
|
| 777 |
+
hidden_states = inputs_embeds
|
| 778 |
+
position_embeddings = self.rotary_emb(hidden_states, position_ids=position_ids)
|
| 779 |
+
|
| 780 |
+
for decoder_layer in self.layers:
|
| 781 |
+
hidden_states = decoder_layer(
|
| 782 |
+
hidden_states,
|
| 783 |
+
attention_mask=causal_mask,
|
| 784 |
+
position_ids=position_ids,
|
| 785 |
+
past_key_values=past_key_values,
|
| 786 |
+
use_cache=use_cache,
|
| 787 |
+
protein_kv_states=protein_feats,
|
| 788 |
+
structure_kv_states=structure_feats,
|
| 789 |
+
msa_kv_states=msa_feats,
|
| 790 |
+
protein_batch_mask=protein_batch_mask,
|
| 791 |
+
structure_batch_mask=structure_batch_mask,
|
| 792 |
+
msa_batch_mask=msa_batch_mask,
|
| 793 |
+
query_attn_mask=attention_mask,
|
| 794 |
+
position_embeddings=position_embeddings,
|
| 795 |
+
**kwargs,
|
| 796 |
+
)
|
| 797 |
+
|
| 798 |
+
hidden_states = self.norm(hidden_states)
|
| 799 |
+
|
| 800 |
+
output = BaseModelOutputWithPast(
|
| 801 |
+
last_hidden_state=hidden_states,
|
| 802 |
+
past_key_values=past_key_values,
|
| 803 |
+
)
|
| 804 |
+
return output
|
| 805 |
+
|
| 806 |
+
|
| 807 |
+
class EvollaForProteinText2Text(EvollaPreTrainedModel, GenerationMixin):
|
| 808 |
+
def __init__(self, config):
|
| 809 |
+
super().__init__(config)
|
| 810 |
+
self.model = EvollaModel(config)
|
| 811 |
+
self.vocab_size = config.vocab_size
|
| 812 |
+
self.lm_head = nn.Linear(config.hidden_size, self.vocab_size, bias=False)
|
| 813 |
+
|
| 814 |
+
self.post_init()
|
| 815 |
+
|
| 816 |
+
def get_input_embeddings(self):
|
| 817 |
+
return self.model.get_input_embeddings()
|
| 818 |
+
|
| 819 |
+
def set_input_embeddings(self, value):
|
| 820 |
+
return self.model.set_input_embeddings(value)
|
| 821 |
+
|
| 822 |
+
@can_return_tuple
|
| 823 |
+
@auto_docstring
|
| 824 |
+
def forward(
|
| 825 |
+
self,
|
| 826 |
+
input_ids: torch.LongTensor | None = None, # text input ids
|
| 827 |
+
attention_mask: torch.Tensor | None = None, # text attention mask
|
| 828 |
+
inputs_embeds: torch.FloatTensor | None = None, # text input embeddings
|
| 829 |
+
labels: torch.LongTensor | None = None,
|
| 830 |
+
protein_input_ids: torch.LongTensor | None = None,
|
| 831 |
+
protein_attention_mask: torch.Tensor | None = None,
|
| 832 |
+
use_cache: bool | None = None,
|
| 833 |
+
logits_to_keep: int | torch.Tensor = 0,
|
| 834 |
+
**kwargs,
|
| 835 |
+
):
|
| 836 |
+
r"""
|
| 837 |
+
protein_input_ids (torch.LongTensor):
|
| 838 |
+
The input IDs for the protein sequence. Should be of shape `(batch_size, protein_seq_length)` and type `torch.LongTensor`.
|
| 839 |
+
protein_attention_mask (torch.Tensor):
|
| 840 |
+
The attention mask for the protein sequence. Should be of shape `(batch_size, protein_seq_length)` and type `torch.Tensor`.
|
| 841 |
+
|
| 842 |
+
Example:
|
| 843 |
+
|
| 844 |
+
```python
|
| 845 |
+
>>> from transformers import EvollaProcessor, EvollaForProteinText2Text
|
| 846 |
+
>>> model = EvollaForProteinText2Text.from_pretrained("westlake/Evolla-10B-hf")
|
| 847 |
+
>>> processor = EvollaProcessor.from_pretrained("westlake/Evolla-10B-hf")
|
| 848 |
+
|
| 849 |
+
>>> protein_information = {
|
| 850 |
+
"aa_seq": "your amino acid sequence",
|
| 851 |
+
"foldseek": "your foldseek sequence",
|
| 852 |
+
}
|
| 853 |
+
>>> question = "What is the function of this protein?"
|
| 854 |
+
>>> message = [
|
| 855 |
+
{"role": "system", "content": "You are an AI expert that can answer any questions about protein."},
|
| 856 |
+
{"role": "user", "content": question},
|
| 857 |
+
]
|
| 858 |
+
|
| 859 |
+
>>> inputs = processor(proteins=[protein_information], messages_list=[message], return_tensors="pt", padding="longest")
|
| 860 |
+
>>> outputs = model.generate(**inputs)
|
| 861 |
+
|
| 862 |
+
>>> print(processor.batch_decode(outputs, skip_special_tokens=True))
|
| 863 |
+
```"""
|
| 864 |
+
outputs: BaseModelOutputWithPast = self.model(
|
| 865 |
+
input_ids=input_ids,
|
| 866 |
+
attention_mask=attention_mask,
|
| 867 |
+
inputs_embeds=inputs_embeds,
|
| 868 |
+
protein_input_ids=protein_input_ids,
|
| 869 |
+
protein_attention_mask=protein_attention_mask,
|
| 870 |
+
use_cache=use_cache,
|
| 871 |
+
**kwargs,
|
| 872 |
+
)
|
| 873 |
+
|
| 874 |
+
hidden_states = outputs.last_hidden_state
|
| 875 |
+
# Only compute necessary logits, and do not upcast them to float if we are not computing the loss
|
| 876 |
+
slice_indices = slice(-logits_to_keep, None) if isinstance(logits_to_keep, int) else logits_to_keep
|
| 877 |
+
logits = self.lm_head(hidden_states[:, slice_indices, :])
|
| 878 |
+
|
| 879 |
+
loss = None
|
| 880 |
+
if labels is not None:
|
| 881 |
+
loss = self.loss_function(logits=logits, labels=labels, vocab_size=self.vocab_size, **kwargs)
|
| 882 |
+
|
| 883 |
+
lm_outputs = CausalLMOutputWithPast(
|
| 884 |
+
loss=loss,
|
| 885 |
+
logits=logits,
|
| 886 |
+
past_key_values=outputs.past_key_values,
|
| 887 |
+
hidden_states=outputs.hidden_states,
|
| 888 |
+
attentions=outputs.attentions,
|
| 889 |
+
)
|
| 890 |
+
return lm_outputs
|
| 891 |
+
|
| 892 |
+
|
| 893 |
+
__all__ = ["EvollaForProteinText2Text", "EvollaModel", "EvollaPreTrainedModel"]
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vaultgemma/__init__.py
ADDED
|
@@ -0,0 +1,28 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright 2025 the HuggingFace Team. All rights reserved.
|
| 2 |
+
#
|
| 3 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 4 |
+
# you may not use this file except in compliance with the License.
|
| 5 |
+
# You may obtain a copy of the License at
|
| 6 |
+
#
|
| 7 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 8 |
+
#
|
| 9 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 10 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 11 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 12 |
+
# See the License for the specific language governing permissions and
|
| 13 |
+
# limitations under the License.
|
| 14 |
+
|
| 15 |
+
from typing import TYPE_CHECKING
|
| 16 |
+
|
| 17 |
+
from ...utils import _LazyModule
|
| 18 |
+
from ...utils.import_utils import define_import_structure
|
| 19 |
+
|
| 20 |
+
|
| 21 |
+
if TYPE_CHECKING:
|
| 22 |
+
from .configuration_vaultgemma import *
|
| 23 |
+
from .modeling_vaultgemma import *
|
| 24 |
+
else:
|
| 25 |
+
import sys
|
| 26 |
+
|
| 27 |
+
_file = globals()["__file__"]
|
| 28 |
+
sys.modules[__name__] = _LazyModule(__name__, _file, define_import_structure(_file), module_spec=__spec__)
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vaultgemma/configuration_vaultgemma.py
ADDED
|
@@ -0,0 +1,109 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
# 🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
|
| 2 |
+
# This file was automatically generated from src/transformers/models/vaultgemma/modular_vaultgemma.py.
|
| 3 |
+
# Do NOT edit this file manually as any edits will be overwritten by the generation of
|
| 4 |
+
# the file from the modular. If any change should be done, please apply the change to the
|
| 5 |
+
# modular_vaultgemma.py file directly. One of our CI enforces this.
|
| 6 |
+
# 🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
|
| 7 |
+
# Copyright 2025 the HuggingFace Team. All rights reserved.
|
| 8 |
+
#
|
| 9 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 10 |
+
# you may not use this file except in compliance with the License.
|
| 11 |
+
# You may obtain a copy of the License at
|
| 12 |
+
#
|
| 13 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 14 |
+
#
|
| 15 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 16 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 17 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 18 |
+
# See the License for the specific language governing permissions and
|
| 19 |
+
# limitations under the License.
|
| 20 |
+
|
| 21 |
+
|
| 22 |
+
from huggingface_hub.dataclasses import strict
|
| 23 |
+
|
| 24 |
+
from ...configuration_utils import PreTrainedConfig
|
| 25 |
+
from ...modeling_rope_utils import RopeParameters
|
| 26 |
+
from ...utils import auto_docstring
|
| 27 |
+
|
| 28 |
+
|
| 29 |
+
@auto_docstring(checkpoint="google/vaultgemma-1b")
|
| 30 |
+
@strict
|
| 31 |
+
class VaultGemmaConfig(PreTrainedConfig):
|
| 32 |
+
r"""
|
| 33 |
+
query_pre_attn_scalar (`float`, *optional*, defaults to 256):
|
| 34 |
+
scaling factor used on the attention scores
|
| 35 |
+
final_logit_softcapping (`float`, *optional*, defaults to 30.0):
|
| 36 |
+
scaling factor when applying tanh softcapping on the logits.
|
| 37 |
+
attn_logit_softcapping (`float`, *optional*, defaults to 50.0):
|
| 38 |
+
scaling factor when applying tanh softcapping on the attention scores.
|
| 39 |
+
|
| 40 |
+
```python
|
| 41 |
+
>>> from transformers import VaultGemmaModel, VaultGemmaConfig
|
| 42 |
+
>>> # Initializing a VaultGemma vaultgemma-7b style configuration
|
| 43 |
+
>>> configuration = VaultGemmaConfig()
|
| 44 |
+
>>> # Initializing a model from the vaultgemma-7b style configuration
|
| 45 |
+
>>> model = VaultGemmaModel(configuration)
|
| 46 |
+
>>> # Accessing the model configuration
|
| 47 |
+
>>> configuration = model.config
|
| 48 |
+
```"""
|
| 49 |
+
|
| 50 |
+
model_type = "vaultgemma"
|
| 51 |
+
keys_to_ignore_at_inference = ["past_key_values"]
|
| 52 |
+
base_model_tp_plan = {
|
| 53 |
+
"layers.*.self_attn.q_proj": "colwise",
|
| 54 |
+
"layers.*.self_attn.k_proj": "colwise",
|
| 55 |
+
"layers.*.self_attn.v_proj": "colwise",
|
| 56 |
+
"layers.*.self_attn.o_proj": "rowwise",
|
| 57 |
+
"layers.*.mlp.gate_proj": "colwise",
|
| 58 |
+
"layers.*.mlp.up_proj": "colwise",
|
| 59 |
+
"layers.*.mlp.down_proj": "rowwise",
|
| 60 |
+
}
|
| 61 |
+
base_model_pp_plan = {
|
| 62 |
+
"embed_tokens": (["input_ids"], ["inputs_embeds"]),
|
| 63 |
+
"layers": (["hidden_states", "attention_mask"], ["hidden_states"]),
|
| 64 |
+
"norm": (["hidden_states"], ["hidden_states"]),
|
| 65 |
+
}
|
| 66 |
+
|
| 67 |
+
vocab_size: int = 256000
|
| 68 |
+
hidden_size: int = 2304
|
| 69 |
+
intermediate_size: int = 9216
|
| 70 |
+
num_hidden_layers: int = 26
|
| 71 |
+
num_attention_heads: int = 8
|
| 72 |
+
num_key_value_heads: int = 4
|
| 73 |
+
head_dim: int = 256
|
| 74 |
+
hidden_activation: str = "gelu_pytorch_tanh"
|
| 75 |
+
max_position_embeddings: int = 8192
|
| 76 |
+
initializer_range: float = 0.02
|
| 77 |
+
rms_norm_eps: float = 1e-6
|
| 78 |
+
use_cache: bool = True
|
| 79 |
+
pad_token_id: int | None = 0
|
| 80 |
+
eos_token_id: int | list[int] | None = 1
|
| 81 |
+
bos_token_id: int | None = 2
|
| 82 |
+
tie_word_embeddings: bool = True
|
| 83 |
+
rope_parameters: RopeParameters | dict | None = None
|
| 84 |
+
attention_bias: bool = False
|
| 85 |
+
attention_dropout: int | float | None = 0.0
|
| 86 |
+
query_pre_attn_scalar: int = 256
|
| 87 |
+
sliding_window: int | None = 4096
|
| 88 |
+
layer_types: list[str] | None = None
|
| 89 |
+
final_logit_softcapping: float | None = 30.0
|
| 90 |
+
attn_logit_softcapping: float | None = 50.0
|
| 91 |
+
|
| 92 |
+
def __post_init__(self, **kwargs):
|
| 93 |
+
if self.layer_types is None:
|
| 94 |
+
self.layer_types = [
|
| 95 |
+
"sliding_attention" if bool((i + 1) % 2) else "full_attention" for i in range(self.num_hidden_layers)
|
| 96 |
+
]
|
| 97 |
+
|
| 98 |
+
super().__post_init__(**kwargs)
|
| 99 |
+
|
| 100 |
+
def validate_architecture(self):
|
| 101 |
+
"""Part of `@strict`-powered validation. Validates the architecture of the config."""
|
| 102 |
+
if self.hidden_size % self.num_attention_heads != 0:
|
| 103 |
+
raise ValueError(
|
| 104 |
+
f"The hidden size ({self.hidden_size}) is not a multiple of the number of attention "
|
| 105 |
+
f"heads ({self.num_attention_heads})."
|
| 106 |
+
)
|
| 107 |
+
|
| 108 |
+
|
| 109 |
+
__all__ = ["VaultGemmaConfig"]
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vaultgemma/modeling_vaultgemma.py
ADDED
|
@@ -0,0 +1,546 @@
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| 1 |
+
# 🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
|
| 2 |
+
# This file was automatically generated from src/transformers/models/vaultgemma/modular_vaultgemma.py.
|
| 3 |
+
# Do NOT edit this file manually as any edits will be overwritten by the generation of
|
| 4 |
+
# the file from the modular. If any change should be done, please apply the change to the
|
| 5 |
+
# modular_vaultgemma.py file directly. One of our CI enforces this.
|
| 6 |
+
# 🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
|
| 7 |
+
# Copyright 2025 the HuggingFace Team. All rights reserved.
|
| 8 |
+
#
|
| 9 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 10 |
+
# you may not use this file except in compliance with the License.
|
| 11 |
+
# You may obtain a copy of the License at
|
| 12 |
+
#
|
| 13 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 14 |
+
#
|
| 15 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 16 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 17 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 18 |
+
# See the License for the specific language governing permissions and
|
| 19 |
+
# limitations under the License.
|
| 20 |
+
|
| 21 |
+
|
| 22 |
+
from collections.abc import Callable
|
| 23 |
+
from typing import Optional
|
| 24 |
+
|
| 25 |
+
import torch
|
| 26 |
+
import torch.nn as nn
|
| 27 |
+
|
| 28 |
+
from ... import initialization as init
|
| 29 |
+
from ...activations import ACT2FN
|
| 30 |
+
from ...cache_utils import Cache, DynamicCache
|
| 31 |
+
from ...generation import GenerationMixin
|
| 32 |
+
from ...integrations import use_kernel_func_from_hub, use_kernelized_func
|
| 33 |
+
from ...masking_utils import create_causal_mask, create_sliding_window_causal_mask
|
| 34 |
+
from ...modeling_flash_attention_utils import FlashAttentionKwargs
|
| 35 |
+
from ...modeling_layers import GradientCheckpointingLayer
|
| 36 |
+
from ...modeling_outputs import BaseModelOutputWithPast, CausalLMOutputWithPast
|
| 37 |
+
from ...modeling_rope_utils import ROPE_INIT_FUNCTIONS, dynamic_rope_update
|
| 38 |
+
from ...modeling_utils import ALL_ATTENTION_FUNCTIONS, PreTrainedModel
|
| 39 |
+
from ...processing_utils import Unpack
|
| 40 |
+
from ...utils import TransformersKwargs, auto_docstring, can_return_tuple
|
| 41 |
+
from ...utils.generic import maybe_autocast, merge_with_config_defaults
|
| 42 |
+
from ...utils.output_capturing import capture_outputs
|
| 43 |
+
from .configuration_vaultgemma import VaultGemmaConfig
|
| 44 |
+
|
| 45 |
+
|
| 46 |
+
class VaultGemmaRMSNorm(nn.Module):
|
| 47 |
+
def __init__(self, dim: int, eps: float = 1e-6):
|
| 48 |
+
super().__init__()
|
| 49 |
+
self.eps = eps
|
| 50 |
+
self.weight = nn.Parameter(torch.zeros(dim))
|
| 51 |
+
|
| 52 |
+
def _norm(self, x):
|
| 53 |
+
return x * torch.rsqrt(x.pow(2).mean(-1, keepdim=True) + self.eps)
|
| 54 |
+
|
| 55 |
+
def forward(self, x):
|
| 56 |
+
output = self._norm(x.float())
|
| 57 |
+
# Llama does x.to(float16) * w whilst VaultGemma is (x * w).to(float16)
|
| 58 |
+
# See https://github.com/huggingface/transformers/pull/29402
|
| 59 |
+
output = output * (1.0 + self.weight.float())
|
| 60 |
+
return output.type_as(x)
|
| 61 |
+
|
| 62 |
+
def extra_repr(self):
|
| 63 |
+
return f"{tuple(self.weight.shape)}, eps={self.eps}"
|
| 64 |
+
|
| 65 |
+
|
| 66 |
+
class VaultGemmaMLP(nn.Module):
|
| 67 |
+
def __init__(self, config):
|
| 68 |
+
super().__init__()
|
| 69 |
+
self.config = config
|
| 70 |
+
self.hidden_size = config.hidden_size
|
| 71 |
+
self.intermediate_size = config.intermediate_size
|
| 72 |
+
self.gate_proj = nn.Linear(self.hidden_size, self.intermediate_size, bias=False)
|
| 73 |
+
self.up_proj = nn.Linear(self.hidden_size, self.intermediate_size, bias=False)
|
| 74 |
+
self.down_proj = nn.Linear(self.intermediate_size, self.hidden_size, bias=False)
|
| 75 |
+
self.act_fn = ACT2FN[config.hidden_activation]
|
| 76 |
+
|
| 77 |
+
def forward(self, x):
|
| 78 |
+
down_proj = self.down_proj(self.act_fn(self.gate_proj(x)) * self.up_proj(x))
|
| 79 |
+
return down_proj
|
| 80 |
+
|
| 81 |
+
|
| 82 |
+
def rotate_half(x):
|
| 83 |
+
"""Rotates half the hidden dims of the input."""
|
| 84 |
+
x1 = x[..., : x.shape[-1] // 2]
|
| 85 |
+
x2 = x[..., x.shape[-1] // 2 :]
|
| 86 |
+
return torch.cat((-x2, x1), dim=-1)
|
| 87 |
+
|
| 88 |
+
|
| 89 |
+
@use_kernel_func_from_hub("rotary_pos_emb")
|
| 90 |
+
def apply_rotary_pos_emb(q, k, cos, sin, unsqueeze_dim=1):
|
| 91 |
+
"""Applies Rotary Position Embedding to the query and key tensors.
|
| 92 |
+
|
| 93 |
+
Args:
|
| 94 |
+
q (`torch.Tensor`): The query tensor.
|
| 95 |
+
k (`torch.Tensor`): The key tensor.
|
| 96 |
+
cos (`torch.Tensor`): The cosine part of the rotary embedding.
|
| 97 |
+
sin (`torch.Tensor`): The sine part of the rotary embedding.
|
| 98 |
+
unsqueeze_dim (`int`, *optional*, defaults to 1):
|
| 99 |
+
The 'unsqueeze_dim' argument specifies the dimension along which to unsqueeze cos[position_ids] and
|
| 100 |
+
sin[position_ids] so that they can be properly broadcasted to the dimensions of q and k. For example, note
|
| 101 |
+
that cos[position_ids] and sin[position_ids] have the shape [batch_size, seq_len, head_dim]. Then, if q and
|
| 102 |
+
k have the shape [batch_size, heads, seq_len, head_dim], then setting unsqueeze_dim=1 makes
|
| 103 |
+
cos[position_ids] and sin[position_ids] broadcastable to the shapes of q and k. Similarly, if q and k have
|
| 104 |
+
the shape [batch_size, seq_len, heads, head_dim], then set unsqueeze_dim=2.
|
| 105 |
+
Returns:
|
| 106 |
+
`tuple(torch.Tensor)` comprising of the query and key tensors rotated using the Rotary Position Embedding.
|
| 107 |
+
"""
|
| 108 |
+
cos = cos.unsqueeze(unsqueeze_dim)
|
| 109 |
+
sin = sin.unsqueeze(unsqueeze_dim)
|
| 110 |
+
q_embed = (q * cos) + (rotate_half(q) * sin)
|
| 111 |
+
k_embed = (k * cos) + (rotate_half(k) * sin)
|
| 112 |
+
return q_embed, k_embed
|
| 113 |
+
|
| 114 |
+
|
| 115 |
+
def repeat_kv(hidden_states: torch.Tensor, n_rep: int) -> torch.Tensor:
|
| 116 |
+
"""
|
| 117 |
+
This is the equivalent of torch.repeat_interleave(x, dim=1, repeats=n_rep). The hidden states go from (batch,
|
| 118 |
+
num_key_value_heads, seqlen, head_dim) to (batch, num_attention_heads, seqlen, head_dim)
|
| 119 |
+
"""
|
| 120 |
+
batch, num_key_value_heads, slen, head_dim = hidden_states.shape
|
| 121 |
+
if n_rep == 1:
|
| 122 |
+
return hidden_states
|
| 123 |
+
hidden_states = hidden_states[:, :, None, :, :].expand(batch, num_key_value_heads, n_rep, slen, head_dim)
|
| 124 |
+
return hidden_states.reshape(batch, num_key_value_heads * n_rep, slen, head_dim)
|
| 125 |
+
|
| 126 |
+
|
| 127 |
+
def eager_attention_forward(
|
| 128 |
+
module: nn.Module,
|
| 129 |
+
query: torch.Tensor,
|
| 130 |
+
key: torch.Tensor,
|
| 131 |
+
value: torch.Tensor,
|
| 132 |
+
attention_mask: torch.Tensor | None,
|
| 133 |
+
dropout: float | int = 0.0,
|
| 134 |
+
scaling: float | None = None,
|
| 135 |
+
softcap: float | None = None,
|
| 136 |
+
**kwargs,
|
| 137 |
+
) -> tuple[torch.Tensor, torch.Tensor]:
|
| 138 |
+
if scaling is None:
|
| 139 |
+
scaling = module.head_dim**-0.5
|
| 140 |
+
|
| 141 |
+
key_states = repeat_kv(key, module.num_key_value_groups)
|
| 142 |
+
value_states = repeat_kv(value, module.num_key_value_groups)
|
| 143 |
+
|
| 144 |
+
attn_weights = torch.matmul(query, key_states.transpose(2, 3)) * scaling
|
| 145 |
+
|
| 146 |
+
if softcap is not None:
|
| 147 |
+
attn_weights = attn_weights / softcap
|
| 148 |
+
attn_weights = torch.tanh(attn_weights)
|
| 149 |
+
attn_weights = attn_weights * softcap
|
| 150 |
+
if attention_mask is not None:
|
| 151 |
+
attn_weights = attn_weights + attention_mask
|
| 152 |
+
|
| 153 |
+
# upcast attention to fp32
|
| 154 |
+
attn_weights = nn.functional.softmax(attn_weights, dim=-1, dtype=torch.float32).to(query.dtype)
|
| 155 |
+
attn_weights = nn.functional.dropout(attn_weights, p=dropout, training=module.training)
|
| 156 |
+
attn_output = torch.matmul(attn_weights, value_states)
|
| 157 |
+
attn_output = attn_output.transpose(1, 2).contiguous()
|
| 158 |
+
return attn_output, attn_weights
|
| 159 |
+
|
| 160 |
+
|
| 161 |
+
@use_kernelized_func(apply_rotary_pos_emb)
|
| 162 |
+
class VaultGemmaAttention(nn.Module):
|
| 163 |
+
"""Multi-headed attention from 'Attention Is All You Need' paper"""
|
| 164 |
+
|
| 165 |
+
def __init__(self, config: VaultGemmaConfig, layer_idx: int):
|
| 166 |
+
super().__init__()
|
| 167 |
+
self.layer_type = config.layer_types[layer_idx] if hasattr(config, "layer_types") else None
|
| 168 |
+
self.config = config
|
| 169 |
+
self.layer_idx = layer_idx
|
| 170 |
+
self.head_dim = getattr(config, "head_dim", config.hidden_size // config.num_attention_heads)
|
| 171 |
+
self.num_key_value_groups = config.num_attention_heads // config.num_key_value_heads
|
| 172 |
+
self.scaling = config.query_pre_attn_scalar**-0.5
|
| 173 |
+
self.attention_dropout = self.config.attention_dropout
|
| 174 |
+
self.is_causal = True
|
| 175 |
+
|
| 176 |
+
self.q_proj = nn.Linear(
|
| 177 |
+
config.hidden_size, config.num_attention_heads * self.head_dim, bias=config.attention_bias
|
| 178 |
+
)
|
| 179 |
+
self.k_proj = nn.Linear(
|
| 180 |
+
config.hidden_size, config.num_key_value_heads * self.head_dim, bias=config.attention_bias
|
| 181 |
+
)
|
| 182 |
+
self.v_proj = nn.Linear(
|
| 183 |
+
config.hidden_size, config.num_key_value_heads * self.head_dim, bias=config.attention_bias
|
| 184 |
+
)
|
| 185 |
+
self.o_proj = nn.Linear(
|
| 186 |
+
config.num_attention_heads * self.head_dim, config.hidden_size, bias=config.attention_bias
|
| 187 |
+
)
|
| 188 |
+
self.attn_logit_softcapping = self.config.attn_logit_softcapping
|
| 189 |
+
self.sliding_window = config.sliding_window if self.layer_type == "sliding_attention" else None
|
| 190 |
+
|
| 191 |
+
def forward(
|
| 192 |
+
self,
|
| 193 |
+
hidden_states: torch.Tensor,
|
| 194 |
+
position_embeddings: tuple[torch.Tensor, torch.Tensor] | None = None,
|
| 195 |
+
attention_mask: torch.Tensor | None = None,
|
| 196 |
+
past_key_values: Cache | None = None,
|
| 197 |
+
**kwargs: Unpack[FlashAttentionKwargs],
|
| 198 |
+
) -> tuple[torch.Tensor, torch.Tensor | None, tuple[torch.Tensor] | None]:
|
| 199 |
+
input_shape = hidden_states.shape[:-1]
|
| 200 |
+
hidden_shape = (*input_shape, -1, self.head_dim)
|
| 201 |
+
|
| 202 |
+
query_states = self.q_proj(hidden_states).view(hidden_shape).transpose(1, 2)
|
| 203 |
+
key_states = self.k_proj(hidden_states).view(hidden_shape).transpose(1, 2)
|
| 204 |
+
value_states = self.v_proj(hidden_states).view(hidden_shape).transpose(1, 2)
|
| 205 |
+
|
| 206 |
+
cos, sin = position_embeddings
|
| 207 |
+
query_states, key_states = apply_rotary_pos_emb(query_states, key_states, cos, sin)
|
| 208 |
+
|
| 209 |
+
if past_key_values is not None:
|
| 210 |
+
key_states, value_states = past_key_values.update(key_states, value_states, self.layer_idx)
|
| 211 |
+
|
| 212 |
+
attention_interface: Callable = ALL_ATTENTION_FUNCTIONS.get_interface(
|
| 213 |
+
self.config._attn_implementation, eager_attention_forward
|
| 214 |
+
)
|
| 215 |
+
|
| 216 |
+
attn_output, attn_weights = attention_interface(
|
| 217 |
+
self,
|
| 218 |
+
query_states,
|
| 219 |
+
key_states,
|
| 220 |
+
value_states,
|
| 221 |
+
attention_mask,
|
| 222 |
+
dropout=self.attention_dropout if self.training else 0.0,
|
| 223 |
+
scaling=self.scaling,
|
| 224 |
+
sliding_window=self.sliding_window,
|
| 225 |
+
softcap=self.attn_logit_softcapping,
|
| 226 |
+
**kwargs,
|
| 227 |
+
)
|
| 228 |
+
|
| 229 |
+
attn_output = attn_output.reshape(*input_shape, -1).contiguous()
|
| 230 |
+
attn_output = self.o_proj(attn_output)
|
| 231 |
+
return attn_output, attn_weights
|
| 232 |
+
|
| 233 |
+
|
| 234 |
+
class VaultGemmaDecoderLayer(GradientCheckpointingLayer):
|
| 235 |
+
def __init__(self, config: VaultGemmaConfig, layer_idx: int):
|
| 236 |
+
super().__init__()
|
| 237 |
+
self.hidden_size = config.hidden_size
|
| 238 |
+
self.config = config
|
| 239 |
+
self.self_attn = VaultGemmaAttention(config=config, layer_idx=layer_idx)
|
| 240 |
+
self.mlp = VaultGemmaMLP(config)
|
| 241 |
+
self.input_layernorm = VaultGemmaRMSNorm(config.hidden_size, eps=config.rms_norm_eps)
|
| 242 |
+
|
| 243 |
+
self.pre_feedforward_layernorm = VaultGemmaRMSNorm(config.hidden_size, eps=config.rms_norm_eps)
|
| 244 |
+
|
| 245 |
+
def forward(
|
| 246 |
+
self,
|
| 247 |
+
hidden_states: torch.Tensor,
|
| 248 |
+
position_embeddings: tuple[torch.Tensor, torch.Tensor],
|
| 249 |
+
attention_mask: torch.Tensor | None = None,
|
| 250 |
+
position_ids: torch.LongTensor | None = None,
|
| 251 |
+
past_key_values: Cache | None = None,
|
| 252 |
+
**kwargs,
|
| 253 |
+
) -> tuple[torch.FloatTensor, tuple[torch.FloatTensor, torch.FloatTensor] | None]:
|
| 254 |
+
residual = hidden_states
|
| 255 |
+
hidden_states = self.input_layernorm(hidden_states)
|
| 256 |
+
# Self Attention
|
| 257 |
+
hidden_states, _ = self.self_attn(
|
| 258 |
+
hidden_states=hidden_states,
|
| 259 |
+
position_embeddings=position_embeddings,
|
| 260 |
+
attention_mask=attention_mask,
|
| 261 |
+
position_ids=position_ids,
|
| 262 |
+
past_key_values=past_key_values,
|
| 263 |
+
**kwargs,
|
| 264 |
+
)
|
| 265 |
+
hidden_states = residual + hidden_states
|
| 266 |
+
|
| 267 |
+
residual = hidden_states
|
| 268 |
+
hidden_states = self.pre_feedforward_layernorm(hidden_states)
|
| 269 |
+
hidden_states = self.mlp(hidden_states)
|
| 270 |
+
hidden_states = residual + hidden_states
|
| 271 |
+
|
| 272 |
+
return hidden_states
|
| 273 |
+
|
| 274 |
+
|
| 275 |
+
class VaultGemmaRotaryEmbedding(nn.Module):
|
| 276 |
+
inv_freq: torch.Tensor # fix linting for `register_buffer`
|
| 277 |
+
|
| 278 |
+
def __init__(self, config: VaultGemmaConfig, device=None):
|
| 279 |
+
super().__init__()
|
| 280 |
+
self.max_seq_len_cached = config.max_position_embeddings
|
| 281 |
+
self.original_max_seq_len = config.max_position_embeddings
|
| 282 |
+
|
| 283 |
+
self.config = config
|
| 284 |
+
|
| 285 |
+
self.rope_type = self.config.rope_parameters["rope_type"]
|
| 286 |
+
rope_init_fn: Callable = self.compute_default_rope_parameters
|
| 287 |
+
if self.rope_type != "default":
|
| 288 |
+
rope_init_fn = ROPE_INIT_FUNCTIONS[self.rope_type]
|
| 289 |
+
inv_freq, self.attention_scaling = rope_init_fn(self.config, device)
|
| 290 |
+
|
| 291 |
+
self.register_buffer("inv_freq", inv_freq, persistent=False)
|
| 292 |
+
self.register_buffer("original_inv_freq", inv_freq.clone(), persistent=False)
|
| 293 |
+
|
| 294 |
+
@staticmethod
|
| 295 |
+
def compute_default_rope_parameters(
|
| 296 |
+
config: VaultGemmaConfig | None = None,
|
| 297 |
+
device: Optional["torch.device"] = None,
|
| 298 |
+
seq_len: int | None = None,
|
| 299 |
+
) -> tuple["torch.Tensor", float]:
|
| 300 |
+
"""
|
| 301 |
+
Computes the inverse frequencies according to the original RoPE implementation
|
| 302 |
+
Args:
|
| 303 |
+
config ([`~transformers.PreTrainedConfig`]):
|
| 304 |
+
The model configuration.
|
| 305 |
+
device (`torch.device`):
|
| 306 |
+
The device to use for initialization of the inverse frequencies.
|
| 307 |
+
seq_len (`int`, *optional*):
|
| 308 |
+
The current sequence length. Unused for this type of RoPE.
|
| 309 |
+
Returns:
|
| 310 |
+
Tuple of (`torch.Tensor`, `float`), containing the inverse frequencies for the RoPE embeddings and the
|
| 311 |
+
post-processing scaling factor applied to the computed cos/sin (unused in this type of RoPE).
|
| 312 |
+
"""
|
| 313 |
+
base = config.rope_parameters["rope_theta"]
|
| 314 |
+
dim = getattr(config, "head_dim", None) or config.hidden_size // config.num_attention_heads
|
| 315 |
+
|
| 316 |
+
attention_factor = 1.0 # Unused in this type of RoPE
|
| 317 |
+
|
| 318 |
+
# Compute the inverse frequencies
|
| 319 |
+
inv_freq = 1.0 / (
|
| 320 |
+
base ** (torch.arange(0, dim, 2, dtype=torch.int64).to(device=device, dtype=torch.float) / dim)
|
| 321 |
+
)
|
| 322 |
+
return inv_freq, attention_factor
|
| 323 |
+
|
| 324 |
+
@torch.no_grad()
|
| 325 |
+
@dynamic_rope_update # power user: used with advanced RoPE types (e.g. dynamic rope)
|
| 326 |
+
def forward(self, x, position_ids):
|
| 327 |
+
inv_freq_expanded = self.inv_freq[None, :, None].float().expand(position_ids.shape[0], -1, 1).to(x.device)
|
| 328 |
+
position_ids_expanded = position_ids[:, None, :].float()
|
| 329 |
+
|
| 330 |
+
device_type = x.device.type if isinstance(x.device.type, str) and x.device.type != "mps" else "cpu"
|
| 331 |
+
with maybe_autocast(device_type=device_type, enabled=False): # Force float32
|
| 332 |
+
freqs = (inv_freq_expanded.float() @ position_ids_expanded.float()).transpose(1, 2)
|
| 333 |
+
emb = torch.cat((freqs, freqs), dim=-1)
|
| 334 |
+
cos = emb.cos() * self.attention_scaling
|
| 335 |
+
sin = emb.sin() * self.attention_scaling
|
| 336 |
+
|
| 337 |
+
return cos.to(dtype=x.dtype), sin.to(dtype=x.dtype)
|
| 338 |
+
|
| 339 |
+
|
| 340 |
+
class VaultGemmaTextScaledWordEmbedding(nn.Embedding):
|
| 341 |
+
"""
|
| 342 |
+
This module overrides nn.Embeddings' forward by multiplying with embeddings scale.
|
| 343 |
+
"""
|
| 344 |
+
|
| 345 |
+
def __init__(self, num_embeddings: int, embedding_dim: int, padding_idx: int, embed_scale: float = 1.0):
|
| 346 |
+
super().__init__(num_embeddings, embedding_dim, padding_idx)
|
| 347 |
+
self.scalar_embed_scale = embed_scale
|
| 348 |
+
self.register_buffer("embed_scale", torch.tensor(embed_scale), persistent=False)
|
| 349 |
+
|
| 350 |
+
def forward(self, input_ids: torch.Tensor):
|
| 351 |
+
return super().forward(input_ids) * self.embed_scale.to(self.weight.dtype)
|
| 352 |
+
|
| 353 |
+
|
| 354 |
+
@auto_docstring
|
| 355 |
+
class VaultGemmaPreTrainedModel(PreTrainedModel):
|
| 356 |
+
config: VaultGemmaConfig
|
| 357 |
+
base_model_prefix = "model"
|
| 358 |
+
supports_gradient_checkpointing = True
|
| 359 |
+
_no_split_modules = ["VaultGemmaDecoderLayer"]
|
| 360 |
+
_skip_keys_device_placement = ["past_key_values"]
|
| 361 |
+
_supports_flash_attn = True
|
| 362 |
+
_supports_sdpa = True
|
| 363 |
+
_supports_flex_attn = True
|
| 364 |
+
|
| 365 |
+
_can_compile_fullgraph = True
|
| 366 |
+
_supports_attention_backend = True
|
| 367 |
+
_can_record_outputs = {
|
| 368 |
+
"hidden_states": VaultGemmaDecoderLayer,
|
| 369 |
+
"attentions": VaultGemmaAttention,
|
| 370 |
+
}
|
| 371 |
+
|
| 372 |
+
@torch.no_grad()
|
| 373 |
+
def _init_weights(self, module):
|
| 374 |
+
super()._init_weights(module)
|
| 375 |
+
# We initialize with 0s to be 1 centered as the RMSNorm here does (1 + weight)
|
| 376 |
+
if "RMSNorm" in module.__class__.__name__:
|
| 377 |
+
init.zeros_(module.weight)
|
| 378 |
+
elif isinstance(module, VaultGemmaTextScaledWordEmbedding):
|
| 379 |
+
init.constant_(module.embed_scale, module.scalar_embed_scale)
|
| 380 |
+
|
| 381 |
+
|
| 382 |
+
@auto_docstring
|
| 383 |
+
class VaultGemmaModel(VaultGemmaPreTrainedModel):
|
| 384 |
+
def __init__(self, config: VaultGemmaConfig):
|
| 385 |
+
super().__init__(config)
|
| 386 |
+
self.padding_idx = config.pad_token_id
|
| 387 |
+
self.vocab_size = config.vocab_size
|
| 388 |
+
# VaultGemma3 downcasts the below to bfloat16, causing sqrt(3072)=55.4256 to become 55.5. See https://github.com/huggingface/transformers/pull/29402
|
| 389 |
+
self.embed_tokens = VaultGemmaTextScaledWordEmbedding(
|
| 390 |
+
config.vocab_size, config.hidden_size, self.padding_idx, embed_scale=self.config.hidden_size**0.5
|
| 391 |
+
)
|
| 392 |
+
self.layers = nn.ModuleList(
|
| 393 |
+
[VaultGemmaDecoderLayer(config, layer_idx) for layer_idx in range(config.num_hidden_layers)]
|
| 394 |
+
)
|
| 395 |
+
self.norm = VaultGemmaRMSNorm(config.hidden_size, eps=config.rms_norm_eps)
|
| 396 |
+
self.rotary_emb = VaultGemmaRotaryEmbedding(config)
|
| 397 |
+
self.gradient_checkpointing = False
|
| 398 |
+
|
| 399 |
+
# Initialize weights and apply final processing
|
| 400 |
+
self.post_init()
|
| 401 |
+
|
| 402 |
+
@merge_with_config_defaults
|
| 403 |
+
@capture_outputs
|
| 404 |
+
@auto_docstring
|
| 405 |
+
def forward(
|
| 406 |
+
self,
|
| 407 |
+
input_ids: torch.LongTensor | None = None,
|
| 408 |
+
attention_mask: torch.Tensor | None = None,
|
| 409 |
+
position_ids: torch.LongTensor | None = None,
|
| 410 |
+
past_key_values: Cache | None = None,
|
| 411 |
+
inputs_embeds: torch.FloatTensor | None = None,
|
| 412 |
+
use_cache: bool | None = None,
|
| 413 |
+
**kwargs: Unpack[TransformersKwargs],
|
| 414 |
+
) -> BaseModelOutputWithPast:
|
| 415 |
+
if (input_ids is None) ^ (inputs_embeds is not None):
|
| 416 |
+
raise ValueError("You must specify exactly one of input_ids or inputs_embeds")
|
| 417 |
+
|
| 418 |
+
if inputs_embeds is None:
|
| 419 |
+
inputs_embeds: torch.Tensor = self.embed_tokens(input_ids)
|
| 420 |
+
|
| 421 |
+
if use_cache and past_key_values is None:
|
| 422 |
+
past_key_values = DynamicCache(config=self.config)
|
| 423 |
+
|
| 424 |
+
if position_ids is None:
|
| 425 |
+
past_seen_tokens = past_key_values.get_seq_length() if past_key_values is not None else 0
|
| 426 |
+
position_ids = torch.arange(inputs_embeds.shape[1], device=inputs_embeds.device) + past_seen_tokens
|
| 427 |
+
position_ids = position_ids.unsqueeze(0)
|
| 428 |
+
|
| 429 |
+
# It may already have been prepared by e.g. `generate`
|
| 430 |
+
if not isinstance(causal_mask_mapping := attention_mask, dict):
|
| 431 |
+
# Prepare mask arguments
|
| 432 |
+
mask_kwargs = {
|
| 433 |
+
"config": self.config,
|
| 434 |
+
"inputs_embeds": inputs_embeds,
|
| 435 |
+
"attention_mask": attention_mask,
|
| 436 |
+
"past_key_values": past_key_values,
|
| 437 |
+
"position_ids": position_ids,
|
| 438 |
+
}
|
| 439 |
+
# Create the masks
|
| 440 |
+
causal_mask_mapping = {
|
| 441 |
+
"full_attention": create_causal_mask(**mask_kwargs),
|
| 442 |
+
"sliding_attention": create_sliding_window_causal_mask(**mask_kwargs),
|
| 443 |
+
}
|
| 444 |
+
|
| 445 |
+
# embed positions
|
| 446 |
+
hidden_states = inputs_embeds
|
| 447 |
+
position_embeddings = self.rotary_emb(hidden_states, position_ids)
|
| 448 |
+
|
| 449 |
+
for i, decoder_layer in enumerate(self.layers[: self.config.num_hidden_layers]):
|
| 450 |
+
hidden_states = decoder_layer(
|
| 451 |
+
hidden_states,
|
| 452 |
+
attention_mask=causal_mask_mapping[self.config.layer_types[i]],
|
| 453 |
+
position_embeddings=position_embeddings,
|
| 454 |
+
position_ids=position_ids,
|
| 455 |
+
past_key_values=past_key_values,
|
| 456 |
+
**kwargs,
|
| 457 |
+
)
|
| 458 |
+
|
| 459 |
+
hidden_states = self.norm(hidden_states)
|
| 460 |
+
|
| 461 |
+
return BaseModelOutputWithPast(
|
| 462 |
+
last_hidden_state=hidden_states,
|
| 463 |
+
past_key_values=past_key_values,
|
| 464 |
+
)
|
| 465 |
+
|
| 466 |
+
|
| 467 |
+
@auto_docstring
|
| 468 |
+
class VaultGemmaForCausalLM(VaultGemmaPreTrainedModel, GenerationMixin):
|
| 469 |
+
_tied_weights_keys = {"lm_head.weight": "model.embed_tokens.weight"}
|
| 470 |
+
_tp_plan = {"lm_head": "colwise_gather_output"}
|
| 471 |
+
_pp_plan = {"lm_head": (["hidden_states"], ["logits"])}
|
| 472 |
+
|
| 473 |
+
def __init__(self, config):
|
| 474 |
+
super().__init__(config)
|
| 475 |
+
self.model = VaultGemmaModel(config)
|
| 476 |
+
self.vocab_size = config.vocab_size
|
| 477 |
+
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
|
| 478 |
+
|
| 479 |
+
# Initialize weights and apply final processing
|
| 480 |
+
self.post_init()
|
| 481 |
+
|
| 482 |
+
@can_return_tuple
|
| 483 |
+
@auto_docstring
|
| 484 |
+
def forward(
|
| 485 |
+
self,
|
| 486 |
+
input_ids: torch.LongTensor | None = None,
|
| 487 |
+
attention_mask: torch.Tensor | None = None,
|
| 488 |
+
position_ids: torch.LongTensor | None = None,
|
| 489 |
+
past_key_values: Cache | None = None,
|
| 490 |
+
inputs_embeds: torch.FloatTensor | None = None,
|
| 491 |
+
labels: torch.LongTensor | None = None,
|
| 492 |
+
use_cache: bool | None = None,
|
| 493 |
+
logits_to_keep: int | torch.Tensor = 0,
|
| 494 |
+
**kwargs: Unpack[TransformersKwargs],
|
| 495 |
+
) -> CausalLMOutputWithPast:
|
| 496 |
+
r"""
|
| 497 |
+
Example:
|
| 498 |
+
|
| 499 |
+
```python
|
| 500 |
+
>>> from transformers import AutoTokenizer, VaultGemmaForCausalLM
|
| 501 |
+
|
| 502 |
+
>>> model = VaultGemmaForCausalLM.from_pretrained("google/gemma-2-9b")
|
| 503 |
+
>>> tokenizer = AutoTokenizer.from_pretrained("google/gemma-2-9b")
|
| 504 |
+
|
| 505 |
+
>>> prompt = "What is your favorite condiment?"
|
| 506 |
+
>>> inputs = tokenizer(prompt, return_tensors="pt")
|
| 507 |
+
|
| 508 |
+
>>> # Generate
|
| 509 |
+
>>> generate_ids = model.generate(inputs.input_ids, max_length=30)
|
| 510 |
+
>>> tokenizer.batch_decode(generate_ids, skip_special_tokens=True, clean_up_tokenization_spaces=False)[0]
|
| 511 |
+
"What is your favorite condiment?"
|
| 512 |
+
```"""
|
| 513 |
+
# decoder outputs consists of (dec_features, layer_state, dec_hidden, dec_attn)
|
| 514 |
+
outputs: BaseModelOutputWithPast = self.model(
|
| 515 |
+
input_ids=input_ids,
|
| 516 |
+
attention_mask=attention_mask,
|
| 517 |
+
position_ids=position_ids,
|
| 518 |
+
past_key_values=past_key_values,
|
| 519 |
+
inputs_embeds=inputs_embeds,
|
| 520 |
+
use_cache=use_cache,
|
| 521 |
+
**kwargs,
|
| 522 |
+
)
|
| 523 |
+
|
| 524 |
+
hidden_states = outputs.last_hidden_state
|
| 525 |
+
# Only compute necessary logits, and do not upcast them to float if we are not computing the loss
|
| 526 |
+
slice_indices = slice(-logits_to_keep, None) if isinstance(logits_to_keep, int) else logits_to_keep
|
| 527 |
+
logits = self.lm_head(hidden_states[:, slice_indices, :])
|
| 528 |
+
if self.config.final_logit_softcapping is not None:
|
| 529 |
+
logits = logits / self.config.final_logit_softcapping
|
| 530 |
+
logits = torch.tanh(logits)
|
| 531 |
+
logits = logits * self.config.final_logit_softcapping
|
| 532 |
+
|
| 533 |
+
loss = None
|
| 534 |
+
if labels is not None:
|
| 535 |
+
loss = self.loss_function(logits, labels, self.vocab_size, **kwargs)
|
| 536 |
+
|
| 537 |
+
return CausalLMOutputWithPast(
|
| 538 |
+
loss=loss,
|
| 539 |
+
logits=logits,
|
| 540 |
+
past_key_values=outputs.past_key_values,
|
| 541 |
+
hidden_states=outputs.hidden_states,
|
| 542 |
+
attentions=outputs.attentions,
|
| 543 |
+
)
|
| 544 |
+
|
| 545 |
+
|
| 546 |
+
__all__ = ["VaultGemmaForCausalLM", "VaultGemmaModel", "VaultGemmaPreTrainedModel"]
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/__init__.py
ADDED
|
@@ -0,0 +1,29 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright 2024 The HuggingFace Team. All rights reserved.
|
| 2 |
+
#
|
| 3 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 4 |
+
# you may not use this file except in compliance with the License.
|
| 5 |
+
# You may obtain a copy of the License at
|
| 6 |
+
#
|
| 7 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 8 |
+
#
|
| 9 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 10 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 11 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 12 |
+
# See the License for the specific language governing permissions and
|
| 13 |
+
# limitations under the License.
|
| 14 |
+
from typing import TYPE_CHECKING
|
| 15 |
+
|
| 16 |
+
from ...utils import _LazyModule
|
| 17 |
+
from ...utils.import_utils import define_import_structure
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
if TYPE_CHECKING:
|
| 21 |
+
from .configuration_vit import *
|
| 22 |
+
from .image_processing_pil_vit import *
|
| 23 |
+
from .image_processing_vit import *
|
| 24 |
+
from .modeling_vit import *
|
| 25 |
+
else:
|
| 26 |
+
import sys
|
| 27 |
+
|
| 28 |
+
_file = globals()["__file__"]
|
| 29 |
+
sys.modules[__name__] = _LazyModule(__name__, _file, define_import_structure(_file), module_spec=__spec__)
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/configuration_vit.py
ADDED
|
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright 2021 Google AI and The HuggingFace Inc. team. All rights reserved.
|
| 2 |
+
#
|
| 3 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 4 |
+
# you may not use this file except in compliance with the License.
|
| 5 |
+
# You may obtain a copy of the License at
|
| 6 |
+
#
|
| 7 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 8 |
+
#
|
| 9 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 10 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 11 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 12 |
+
# See the License for the specific language governing permissions and
|
| 13 |
+
# limitations under the License.
|
| 14 |
+
"""ViT model configuration"""
|
| 15 |
+
|
| 16 |
+
from huggingface_hub.dataclasses import strict
|
| 17 |
+
|
| 18 |
+
from ...configuration_utils import PreTrainedConfig
|
| 19 |
+
from ...utils import auto_docstring
|
| 20 |
+
|
| 21 |
+
|
| 22 |
+
@auto_docstring(checkpoint="google/vit-base-patch16-224")
|
| 23 |
+
@strict
|
| 24 |
+
class ViTConfig(PreTrainedConfig):
|
| 25 |
+
r"""
|
| 26 |
+
encoder_stride (`int`, *optional*, defaults to 16):
|
| 27 |
+
Factor to increase the spatial resolution by in the decoder head for masked image modeling.
|
| 28 |
+
pooler_output_size (`int`, *optional*):
|
| 29 |
+
Dimensionality of the pooler layer. If None, defaults to `hidden_size`.
|
| 30 |
+
pooler_act (`str`, *optional*, defaults to `"tanh"`):
|
| 31 |
+
The activation function to be used by the pooler.
|
| 32 |
+
|
| 33 |
+
Example:
|
| 34 |
+
|
| 35 |
+
```python
|
| 36 |
+
>>> from transformers import ViTConfig, ViTModel
|
| 37 |
+
|
| 38 |
+
>>> # Initializing a ViT vit-base-patch16-224 style configuration
|
| 39 |
+
>>> configuration = ViTConfig()
|
| 40 |
+
|
| 41 |
+
>>> # Initializing a model (with random weights) from the vit-base-patch16-224 style configuration
|
| 42 |
+
>>> model = ViTModel(configuration)
|
| 43 |
+
|
| 44 |
+
>>> # Accessing the model configuration
|
| 45 |
+
>>> configuration = model.config
|
| 46 |
+
```"""
|
| 47 |
+
|
| 48 |
+
model_type = "vit"
|
| 49 |
+
|
| 50 |
+
hidden_size: int = 768
|
| 51 |
+
num_hidden_layers: int = 12
|
| 52 |
+
num_attention_heads: int = 12
|
| 53 |
+
intermediate_size: int = 3072
|
| 54 |
+
hidden_act: str = "gelu"
|
| 55 |
+
hidden_dropout_prob: float | int = 0.0
|
| 56 |
+
attention_probs_dropout_prob: float | int = 0.0
|
| 57 |
+
initializer_range: float = 0.02
|
| 58 |
+
layer_norm_eps: float = 1e-12
|
| 59 |
+
image_size: int | list[int] | tuple[int, int] = 224
|
| 60 |
+
patch_size: int | list[int] | tuple[int, int] = 16
|
| 61 |
+
num_channels: int = 3
|
| 62 |
+
qkv_bias: bool = True
|
| 63 |
+
encoder_stride: int = 16
|
| 64 |
+
pooler_output_size: int | None = None
|
| 65 |
+
pooler_act: str = "tanh"
|
| 66 |
+
|
| 67 |
+
def __post_init__(self, **kwargs):
|
| 68 |
+
self.pooler_output_size = self.pooler_output_size if self.pooler_output_size else self.hidden_size
|
| 69 |
+
super().__post_init__(**kwargs)
|
| 70 |
+
|
| 71 |
+
|
| 72 |
+
__all__ = ["ViTConfig"]
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/image_processing_pil_vit.py
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
|
| 2 |
+
#
|
| 3 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 4 |
+
# you may not use this file except in compliance with the License.
|
| 5 |
+
# You may obtain a copy of the License at
|
| 6 |
+
#
|
| 7 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 8 |
+
#
|
| 9 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 10 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 11 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 12 |
+
# See the License for the specific language governing permissions and
|
| 13 |
+
# limitations under the License.
|
| 14 |
+
"""Image processor class for ViT."""
|
| 15 |
+
|
| 16 |
+
from ...image_processing_backends import PilBackend
|
| 17 |
+
from ...image_utils import IMAGENET_STANDARD_MEAN, IMAGENET_STANDARD_STD, PILImageResampling
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
class ViTImageProcessorPil(PilBackend):
|
| 21 |
+
resample = PILImageResampling.BILINEAR
|
| 22 |
+
image_mean = IMAGENET_STANDARD_MEAN
|
| 23 |
+
image_std = IMAGENET_STANDARD_STD
|
| 24 |
+
size = {"height": 224, "width": 224}
|
| 25 |
+
do_resize = True
|
| 26 |
+
do_rescale = True
|
| 27 |
+
do_normalize = True
|
| 28 |
+
|
| 29 |
+
|
| 30 |
+
__all__ = ["ViTImageProcessorPil"]
|
LTA_openwebtext_dualt/mini_owt_logdirichlet/.venv_qwen35_uv/lib/python3.12/site-packages/transformers/models/vit/image_processing_vit.py
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
|
| 2 |
+
#
|
| 3 |
+
# Licensed under the Apache License, Version 2.0 (the "License");
|
| 4 |
+
# you may not use this file except in compliance with the License.
|
| 5 |
+
# You may obtain a copy of the License at
|
| 6 |
+
#
|
| 7 |
+
# http://www.apache.org/licenses/LICENSE-2.0
|
| 8 |
+
#
|
| 9 |
+
# Unless required by applicable law or agreed to in writing, software
|
| 10 |
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
| 11 |
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
| 12 |
+
# See the License for the specific language governing permissions and
|
| 13 |
+
# limitations under the License.
|
| 14 |
+
"""Image processor class for ViT."""
|
| 15 |
+
|
| 16 |
+
from ...image_processing_backends import TorchvisionBackend
|
| 17 |
+
from ...image_utils import IMAGENET_STANDARD_MEAN, IMAGENET_STANDARD_STD, PILImageResampling
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
class ViTImageProcessor(TorchvisionBackend):
|
| 21 |
+
resample = PILImageResampling.BILINEAR
|
| 22 |
+
image_mean = IMAGENET_STANDARD_MEAN
|
| 23 |
+
image_std = IMAGENET_STANDARD_STD
|
| 24 |
+
size = {"height": 224, "width": 224}
|
| 25 |
+
do_resize = True
|
| 26 |
+
do_rescale = True
|
| 27 |
+
do_normalize = True
|
| 28 |
+
|
| 29 |
+
|
| 30 |
+
__all__ = ["ViTImageProcessor"]
|