Upload configuration_neuroclr.py
Browse files- configuration_neuroclr.py +59 -0
configuration_neuroclr.py
ADDED
|
@@ -0,0 +1,59 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# classification/configuration_neuroclr.py
|
| 2 |
+
from transformers import PretrainedConfig
|
| 3 |
+
|
| 4 |
+
class NeuroCLRConfig(PretrainedConfig):
|
| 5 |
+
model_type = "neuroclr"
|
| 6 |
+
|
| 7 |
+
def __init__(
|
| 8 |
+
self,
|
| 9 |
+
# Encoder / SSL
|
| 10 |
+
TSlength: int = 128,
|
| 11 |
+
nhead: int = 4,
|
| 12 |
+
nlayer: int = 4,
|
| 13 |
+
projector_out1: int = 256,
|
| 14 |
+
projector_out2: int = 128,
|
| 15 |
+
pooling: str = "flatten", # input is [B,1,128]
|
| 16 |
+
normalize_input: bool = True,
|
| 17 |
+
|
| 18 |
+
# Classification
|
| 19 |
+
n_rois: int = 200,
|
| 20 |
+
num_labels: int = 2,
|
| 21 |
+
|
| 22 |
+
# ResNet1D head hyperparams
|
| 23 |
+
base_filters: int = 256,
|
| 24 |
+
kernel_size: int = 16,
|
| 25 |
+
stride: int = 2,
|
| 26 |
+
groups: int = 32,
|
| 27 |
+
n_block: int = 48,
|
| 28 |
+
downsample_gap: int = 6,
|
| 29 |
+
increasefilter_gap: int = 12,
|
| 30 |
+
use_bn: bool = True,
|
| 31 |
+
use_do: bool = True,
|
| 32 |
+
|
| 33 |
+
**kwargs
|
| 34 |
+
):
|
| 35 |
+
super().__init__(**kwargs)
|
| 36 |
+
|
| 37 |
+
# Encoder
|
| 38 |
+
self.TSlength = TSlength
|
| 39 |
+
self.nhead = nhead
|
| 40 |
+
self.nlayer = nlayer
|
| 41 |
+
self.projector_out1 = projector_out1
|
| 42 |
+
self.projector_out2 = projector_out2
|
| 43 |
+
self.pooling = pooling
|
| 44 |
+
self.normalize_input = normalize_input
|
| 45 |
+
|
| 46 |
+
# Classification
|
| 47 |
+
self.n_rois = n_rois
|
| 48 |
+
self.num_labels = num_labels
|
| 49 |
+
|
| 50 |
+
# ResNet1D head
|
| 51 |
+
self.base_filters = base_filters
|
| 52 |
+
self.kernel_size = kernel_size
|
| 53 |
+
self.stride = stride
|
| 54 |
+
self.groups = groups
|
| 55 |
+
self.n_block = n_block
|
| 56 |
+
self.downsample_gap = downsample_gap
|
| 57 |
+
self.increasefilter_gap = increasefilter_gap
|
| 58 |
+
self.use_bn = use_bn
|
| 59 |
+
self.use_do = use_do
|