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README.md
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- torch
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### Data preprocessing
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To run **CellFM**, we need to first preprocess the data in h5 or h5ad format. The preprocessing pipeline for different downstream tasks can refer to [process.ipynb](https://github.com/biomed-AI/CellFM/blob/main/tutorials/process.ipynb). We recommend storing the processed datasets in the [Datasets](#Datasets).
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### Train on the new dataset
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### Tutorials
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We provide tutorials for CellFM applications.
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#### Tutorial 1: Cell Annotation
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- torch
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### Data preprocessing
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To run **CellFM**, we need to first preprocess the data in h5 or h5ad format. The preprocessing pipeline for different downstream tasks can refer to [process.ipynb](https://github.com/biomed-AI/CellFM/blob/main/tutorials/process.ipynb). We recommend storing the processed datasets in the [Datasets](https://github.com/biomed-AI/CellFM#Datasets).
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### Train on the new dataset
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### Tutorials
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We provide tutorials for CellFM applications. Checkpoints of our model are stored in [Model](https://huggingface.co/ShangguanNingyuan/CellFM/tree/main).
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#### Tutorial 1: Cell Annotation
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