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README.md
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# PorkBellyHSI
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This repository contains source code showing the model architecture, loss function, and training pipeline used by Engstrøm et al. [[1]](#references) to generate chemical maps of pork bellies with a modified U-Net [[2]](#references). Executing [train_unet_chemmap.py](train_unet_chemmap.py) will train, validate, and evaluate the modified U-Net under the five-fold cross-validation scheme explained by Engstrøm et al. [[1]](#references). Likewise, [load_ensemble_unet.py](load_ensemble_unet.py) loads an ensemble of the five U-Nets (weights stored in [model_weights/](
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Note that these scripts are for documentation purposes as actual training and evaluation require access to the dataset by Albano-Gaglio et al. [[3]](#references).
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# PorkBellyHSI
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This repository contains source code showing the model architecture, loss function, and training pipeline used by Engstrøm et al. [[1]](#references) to generate chemical maps of pork bellies with a modified U-Net [[2]](#references). Executing [train_unet_chemmap.py](train_unet_chemmap.py) will train, validate, and evaluate the modified U-Net under the five-fold cross-validation scheme explained by Engstrøm et al. [[1]](#references). Likewise, [load_ensemble_unet.py](load_ensemble_unet.py) loads an ensemble of the five U-Nets (weights stored in [model_weights/](https://huggingface.co/Sm00thix/unet_chemical_map/tree/main/model_weights/
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)) and uses them to make the predictions shown in [ensemble_prediction.png](ensemble_prediction.png) and [ensemble_prediction_masked.png](ensemble_prediction_masked.png).
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Note that these scripts are for documentation purposes as actual training and evaluation require access to the dataset by Albano-Gaglio et al. [[3]](#references).
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model_weights/.gitkeep
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