Commit
·
6004402
1
Parent(s):
9491370
Update README.md
Browse files
README.md
CHANGED
|
@@ -44,7 +44,12 @@ Use the code below to get started with the model.
|
|
| 44 |
|
| 45 |
First, download the necessary libraries.
|
| 46 |
```bash
|
| 47 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 48 |
```
|
| 49 |
|
| 50 |
Second, run the following Python script to run inference on a single patient:
|
|
|
|
| 44 |
|
| 45 |
First, download the necessary libraries.
|
| 46 |
```bash
|
| 47 |
+
# Create Python 3.10 environment
|
| 48 |
+
conda create --name ehrshot_env python=3.10 -y
|
| 49 |
+
conda activate ehrshot_env
|
| 50 |
+
|
| 51 |
+
# Install requirements
|
| 52 |
+
pip install torch==2.1.1 femr==0.2.0 datasets==2.15.0 flash_attn==2.3.6 transformers==4.35.2
|
| 53 |
```
|
| 54 |
|
| 55 |
Second, run the following Python script to run inference on a single patient:
|