Statistical-Impossibility commited on
Commit
887d47e
·
verified ·
1 Parent(s): f50cc3a

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +22 -4
README.md CHANGED
@@ -1,6 +1,6 @@
1
  ---
2
  language: en
3
- license: cc-by-nc-4.0
4
  library_name: transformers
5
  pipeline_tag: token-classification
6
  tags:
@@ -13,10 +13,17 @@ tags:
13
 
14
  # Feline-NER
15
 
 
 
16
  ## Model Description
17
- **Feline-NER** is a transformer-based named entity recognition (NER) model for **feline veterinary scientific literature**.
18
 
19
- The model follows the BERT architecture and was initialized from **BioBERT v1.2**, further domain-adapted on feline-related PubMed Central articles (**Feline-BERT**), and fine-tuned for NER (**Feline-NER**).
 
 
 
 
 
 
20
 
21
  This model is intended **solely for research and educational use**.
22
 
@@ -44,6 +51,17 @@ Performance varies by entity type; PROCEDURE and ANATOMY remain challenging due
44
  - Information extraction from feline scientific literature
45
  - Educational demonstrations
46
 
 
 
 
 
 
 
 
 
 
 
 
47
  ## ⚠️ Limitations & Warnings
48
  - **NOT FOR CLINICAL USE**
49
  - Not validated for diagnosis or treatment
@@ -51,4 +69,4 @@ Performance varies by entity type; PROCEDURE and ANATOMY remain challenging due
51
  - Single-annotator dataset
52
 
53
  ## Author
54
- Statistical-Impossibility
 
1
  ---
2
  language: en
3
+ license: apache-2.0
4
  library_name: transformers
5
  pipeline_tag: token-classification
6
  tags:
 
13
 
14
  # Feline-NER
15
 
16
+ Named Entity Recognition model for feline veterinary medicine, trained on 1,300 annotated sentences from PubMed literature.
17
+
18
  ## Model Description
 
19
 
20
+ **Feline-NER** is a token classification model fine-tuned for extracting clinical entities from feline veterinary scientific literature.
21
+
22
+ **Model lineage:**
23
+ - Base: **BERT** (Devlin et al., 2019)
24
+ - Domain-adapted: **BioBERT v1.2** (Lee et al., 2019) - biomedical literature
25
+ - Further adapted: **Feline-BERT** - 11,830 feline PubMed articles (MLM fine-tuning)
26
+ - Task-specific: **Feline-NER** - 1,300 manually annotated sentences (token classification)
27
 
28
  This model is intended **solely for research and educational use**.
29
 
 
51
  - Information extraction from feline scientific literature
52
  - Educational demonstrations
53
 
54
+ ## Usage
55
+
56
+ This model can be used with the Hugging Face `pipeline` API:
57
+
58
+ ```python
59
+ from transformers import pipeline
60
+ ner = pipeline("ner", model="Statistical-Impossibility/Feline-NER", aggregation_strategy="simple")
61
+ print(ner("The cat was diagnosed with FIV and treated with prednisolone."))
62
+ ```
63
+
64
+
65
  ## ⚠️ Limitations & Warnings
66
  - **NOT FOR CLINICAL USE**
67
  - Not validated for diagnosis or treatment
 
69
  - Single-annotator dataset
70
 
71
  ## Author
72
+ Statistical-Impossibility