Upload folder using huggingface_hub
Browse files- README.md +77 -3
- adapter_config.json +42 -0
- adapter_model.safetensors +3 -0
- added_tokens.json +24 -0
- chat_template.jinja +7 -0
- merges.txt +0 -0
- special_tokens_map.json +31 -0
- tokenizer_config.json +208 -0
- vocab.json +0 -0
README.md
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# K2-Inhale (LoRA Adapter)
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**Base model:** `LLM360/K2-Think`
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**Author fine-tune:** `SutanRifkyt`
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**Method:** QLoRA (4-bit)
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**Domain:** Lung CT & PET/CT findings (nodule, consolidation, FDG uptake, staging hints)
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**Use case:** Explain findings in plain language for patients, say how concerning for lung cancer, and suggest next step (follow-up CT, PET-CT, biopsy, urgent oncologist etc).
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## How to use
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```python
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import torch
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from transformers import AutoTokenizer, AutoModelForCausalLM
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from peft import PeftModel
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base_model_id = "LLM360/K2-Think"
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adapter_id = "SutanRifkyt/K2-Inhale"
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tokenizer = AutoTokenizer.from_pretrained(
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base_model_id,
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use_fast=False,
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trust_remote_code=False
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)
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model = AutoModelForCausalLM.from_pretrained(
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base_model_id,
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torch_dtype=torch.bfloat16,
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device_map="auto",
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trust_remote_code=False
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)
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model = PeftModel.from_pretrained(model, adapter_id)
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prompt = """<|user|>:
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Explain this chest CT finding in simple language for the patient, assess how concerning it is for lung cancer, and say what should happen next.
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Clinical findings:
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Spiculated 1.8 cm nodule in the right upper lobe with irregular margins and increased FDG uptake on PET.
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<|assistant|>:
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"""
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inputs = tokenizer(prompt, return_tensors="pt").to("cuda")
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with torch.no_grad():
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output = model.generate(
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**inputs,
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max_new_tokens=300,
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do_sample=False,
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temperature=0.0,
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)
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print(tokenizer.decode(output[0], skip_special_tokens=True))
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Training data
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Merged ~8k instruction-style samples from:
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ReXGroundingCT style CT findings (free-text localized abnormalities)
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Lung-PET-CT-Dx (TCIA) PET/CT cases with histopathology labels and staging clues
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Each sample is turned into:
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instruction: ask model to explain for patient, assess cancer concern, propose next step
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input: actual radiology-style finding text
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output: chain-of-thought style reasoning + final recommendation
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Safety
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This model is not a doctor. It's a triage / education assistant.
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It should not replace radiologist, oncologist, or clinical decision-making.
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License
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LoRA weights are provided for research use.
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Source data includes CC BY 4.0 material from The Cancer Imaging Archive (TCIA) and academic datasets.
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adapter_config.json
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{
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"alpha_pattern": {},
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"auto_mapping": null,
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"base_model_name_or_path": "LLM360/K2-Think",
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"bias": "none",
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"corda_config": null,
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"eva_config": null,
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"exclude_modules": null,
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"fan_in_fan_out": false,
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"inference_mode": true,
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"init_lora_weights": true,
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"layer_replication": null,
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"layers_pattern": null,
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"layers_to_transform": null,
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"loftq_config": {},
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"lora_alpha": 128,
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"lora_bias": false,
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"lora_dropout": 0.05,
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"megatron_config": null,
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"megatron_core": "megatron.core",
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"modules_to_save": null,
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"peft_type": "LORA",
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"qalora_group_size": 16,
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"r": 64,
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"rank_pattern": {},
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"revision": null,
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"target_modules": [
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"k_proj",
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"v_proj",
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"o_proj",
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"down_proj",
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"gate_proj",
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"up_proj",
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"q_proj"
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],
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"target_parameters": null,
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"task_type": "CAUSAL_LM",
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"trainable_token_indices": null,
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"use_dora": false,
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"use_qalora": false,
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"use_rslora": false
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}
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adapter_model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:83bf7c8551ece9fcbbb4a348f3efc886c0717bfb9e18a18e88ea840a31c061d7
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size 2147605960
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added_tokens.json
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{
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"</tool_call>": 151658,
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"<tool_call>": 151657,
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"<|box_end|>": 151649,
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"<|box_start|>": 151648,
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"<|endoftext|>": 151643,
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"<|file_sep|>": 151664,
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"<|fim_middle|>": 151660,
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"<|fim_pad|>": 151662,
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"<|fim_prefix|>": 151659,
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"<|fim_suffix|>": 151661,
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"<|im_end|>": 151645,
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"<|im_start|>": 151644,
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"<|image_pad|>": 151655,
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"<|object_ref_end|>": 151647,
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"<|object_ref_start|>": 151646,
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"<|quad_end|>": 151651,
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"<|quad_start|>": 151650,
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"<|repo_name|>": 151663,
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"<|video_pad|>": 151656,
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"<|vision_end|>": 151653,
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"<|vision_pad|>": 151654,
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"<|vision_start|>": 151652
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}
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chat_template.jinja
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{% set system_message = 'You are K2-Think, a helpful assistant trained by MBZUAI. To answer the user\'s question, you first think about the reasoning process and then provide the user with the answer. The reasoning process and answer are enclosed within <think> </think> and <answer> </answer> tags, respectively, i.e., <think> reasoning process here </think> <answer> answer here </answer>.' %}{% if messages[0]['role'] == 'system' %}{% set loop_messages = messages[1:] %}{% set system_message = messages[0]['content'] %}{% else %}{% set loop_messages = messages %}{% endif %}{% if system_message is defined %}{{ '<|im_start|>system
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' + system_message + '<|im_end|>
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' }}{% endif %}{% for message in loop_messages %}{% set content = message['content'] %}{% if message['role'] == 'user' %}{{ '<|im_start|>user
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' + content + '<|im_end|>
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<|im_start|>assistant
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' }}{% elif message['role'] == 'assistant' %}{{ content + '<|im_end|>
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' }}{% endif %}{% endfor %}
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merges.txt
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The diff for this file is too large to render.
See raw diff
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special_tokens_map.json
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{
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"additional_special_tokens": [
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"<|im_start|>",
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"<|im_end|>",
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"<|object_ref_start|>",
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"<|object_ref_end|>",
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"<|box_start|>",
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| 8 |
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"<|box_end|>",
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| 9 |
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"<|quad_start|>",
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"<|quad_end|>",
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"<|vision_start|>",
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"<|vision_end|>",
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"<|vision_pad|>",
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"<|image_pad|>",
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"<|video_pad|>"
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],
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"eos_token": {
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"content": "<|im_end|>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"pad_token": {
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"content": "<|endoftext|>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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}
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}
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tokenizer_config.json
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{
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"add_bos_token": false,
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"add_prefix_space": false,
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"added_tokens_decoder": {
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"151643": {
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"content": "<|endoftext|>",
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"lstrip": false,
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+
"normalized": false,
|
| 9 |
+
"rstrip": false,
|
| 10 |
+
"single_word": false,
|
| 11 |
+
"special": true
|
| 12 |
+
},
|
| 13 |
+
"151644": {
|
| 14 |
+
"content": "<|im_start|>",
|
| 15 |
+
"lstrip": false,
|
| 16 |
+
"normalized": false,
|
| 17 |
+
"rstrip": false,
|
| 18 |
+
"single_word": false,
|
| 19 |
+
"special": true
|
| 20 |
+
},
|
| 21 |
+
"151645": {
|
| 22 |
+
"content": "<|im_end|>",
|
| 23 |
+
"lstrip": false,
|
| 24 |
+
"normalized": false,
|
| 25 |
+
"rstrip": false,
|
| 26 |
+
"single_word": false,
|
| 27 |
+
"special": true
|
| 28 |
+
},
|
| 29 |
+
"151646": {
|
| 30 |
+
"content": "<|object_ref_start|>",
|
| 31 |
+
"lstrip": false,
|
| 32 |
+
"normalized": false,
|
| 33 |
+
"rstrip": false,
|
| 34 |
+
"single_word": false,
|
| 35 |
+
"special": true
|
| 36 |
+
},
|
| 37 |
+
"151647": {
|
| 38 |
+
"content": "<|object_ref_end|>",
|
| 39 |
+
"lstrip": false,
|
| 40 |
+
"normalized": false,
|
| 41 |
+
"rstrip": false,
|
| 42 |
+
"single_word": false,
|
| 43 |
+
"special": true
|
| 44 |
+
},
|
| 45 |
+
"151648": {
|
| 46 |
+
"content": "<|box_start|>",
|
| 47 |
+
"lstrip": false,
|
| 48 |
+
"normalized": false,
|
| 49 |
+
"rstrip": false,
|
| 50 |
+
"single_word": false,
|
| 51 |
+
"special": true
|
| 52 |
+
},
|
| 53 |
+
"151649": {
|
| 54 |
+
"content": "<|box_end|>",
|
| 55 |
+
"lstrip": false,
|
| 56 |
+
"normalized": false,
|
| 57 |
+
"rstrip": false,
|
| 58 |
+
"single_word": false,
|
| 59 |
+
"special": true
|
| 60 |
+
},
|
| 61 |
+
"151650": {
|
| 62 |
+
"content": "<|quad_start|>",
|
| 63 |
+
"lstrip": false,
|
| 64 |
+
"normalized": false,
|
| 65 |
+
"rstrip": false,
|
| 66 |
+
"single_word": false,
|
| 67 |
+
"special": true
|
| 68 |
+
},
|
| 69 |
+
"151651": {
|
| 70 |
+
"content": "<|quad_end|>",
|
| 71 |
+
"lstrip": false,
|
| 72 |
+
"normalized": false,
|
| 73 |
+
"rstrip": false,
|
| 74 |
+
"single_word": false,
|
| 75 |
+
"special": true
|
| 76 |
+
},
|
| 77 |
+
"151652": {
|
| 78 |
+
"content": "<|vision_start|>",
|
| 79 |
+
"lstrip": false,
|
| 80 |
+
"normalized": false,
|
| 81 |
+
"rstrip": false,
|
| 82 |
+
"single_word": false,
|
| 83 |
+
"special": true
|
| 84 |
+
},
|
| 85 |
+
"151653": {
|
| 86 |
+
"content": "<|vision_end|>",
|
| 87 |
+
"lstrip": false,
|
| 88 |
+
"normalized": false,
|
| 89 |
+
"rstrip": false,
|
| 90 |
+
"single_word": false,
|
| 91 |
+
"special": true
|
| 92 |
+
},
|
| 93 |
+
"151654": {
|
| 94 |
+
"content": "<|vision_pad|>",
|
| 95 |
+
"lstrip": false,
|
| 96 |
+
"normalized": false,
|
| 97 |
+
"rstrip": false,
|
| 98 |
+
"single_word": false,
|
| 99 |
+
"special": true
|
| 100 |
+
},
|
| 101 |
+
"151655": {
|
| 102 |
+
"content": "<|image_pad|>",
|
| 103 |
+
"lstrip": false,
|
| 104 |
+
"normalized": false,
|
| 105 |
+
"rstrip": false,
|
| 106 |
+
"single_word": false,
|
| 107 |
+
"special": true
|
| 108 |
+
},
|
| 109 |
+
"151656": {
|
| 110 |
+
"content": "<|video_pad|>",
|
| 111 |
+
"lstrip": false,
|
| 112 |
+
"normalized": false,
|
| 113 |
+
"rstrip": false,
|
| 114 |
+
"single_word": false,
|
| 115 |
+
"special": true
|
| 116 |
+
},
|
| 117 |
+
"151657": {
|
| 118 |
+
"content": "<tool_call>",
|
| 119 |
+
"lstrip": false,
|
| 120 |
+
"normalized": false,
|
| 121 |
+
"rstrip": false,
|
| 122 |
+
"single_word": false,
|
| 123 |
+
"special": false
|
| 124 |
+
},
|
| 125 |
+
"151658": {
|
| 126 |
+
"content": "</tool_call>",
|
| 127 |
+
"lstrip": false,
|
| 128 |
+
"normalized": false,
|
| 129 |
+
"rstrip": false,
|
| 130 |
+
"single_word": false,
|
| 131 |
+
"special": false
|
| 132 |
+
},
|
| 133 |
+
"151659": {
|
| 134 |
+
"content": "<|fim_prefix|>",
|
| 135 |
+
"lstrip": false,
|
| 136 |
+
"normalized": false,
|
| 137 |
+
"rstrip": false,
|
| 138 |
+
"single_word": false,
|
| 139 |
+
"special": false
|
| 140 |
+
},
|
| 141 |
+
"151660": {
|
| 142 |
+
"content": "<|fim_middle|>",
|
| 143 |
+
"lstrip": false,
|
| 144 |
+
"normalized": false,
|
| 145 |
+
"rstrip": false,
|
| 146 |
+
"single_word": false,
|
| 147 |
+
"special": false
|
| 148 |
+
},
|
| 149 |
+
"151661": {
|
| 150 |
+
"content": "<|fim_suffix|>",
|
| 151 |
+
"lstrip": false,
|
| 152 |
+
"normalized": false,
|
| 153 |
+
"rstrip": false,
|
| 154 |
+
"single_word": false,
|
| 155 |
+
"special": false
|
| 156 |
+
},
|
| 157 |
+
"151662": {
|
| 158 |
+
"content": "<|fim_pad|>",
|
| 159 |
+
"lstrip": false,
|
| 160 |
+
"normalized": false,
|
| 161 |
+
"rstrip": false,
|
| 162 |
+
"single_word": false,
|
| 163 |
+
"special": false
|
| 164 |
+
},
|
| 165 |
+
"151663": {
|
| 166 |
+
"content": "<|repo_name|>",
|
| 167 |
+
"lstrip": false,
|
| 168 |
+
"normalized": false,
|
| 169 |
+
"rstrip": false,
|
| 170 |
+
"single_word": false,
|
| 171 |
+
"special": false
|
| 172 |
+
},
|
| 173 |
+
"151664": {
|
| 174 |
+
"content": "<|file_sep|>",
|
| 175 |
+
"lstrip": false,
|
| 176 |
+
"normalized": false,
|
| 177 |
+
"rstrip": false,
|
| 178 |
+
"single_word": false,
|
| 179 |
+
"special": false
|
| 180 |
+
}
|
| 181 |
+
},
|
| 182 |
+
"additional_special_tokens": [
|
| 183 |
+
"<|im_start|>",
|
| 184 |
+
"<|im_end|>",
|
| 185 |
+
"<|object_ref_start|>",
|
| 186 |
+
"<|object_ref_end|>",
|
| 187 |
+
"<|box_start|>",
|
| 188 |
+
"<|box_end|>",
|
| 189 |
+
"<|quad_start|>",
|
| 190 |
+
"<|quad_end|>",
|
| 191 |
+
"<|vision_start|>",
|
| 192 |
+
"<|vision_end|>",
|
| 193 |
+
"<|vision_pad|>",
|
| 194 |
+
"<|image_pad|>",
|
| 195 |
+
"<|video_pad|>"
|
| 196 |
+
],
|
| 197 |
+
"bos_token": null,
|
| 198 |
+
"clean_up_tokenization_spaces": false,
|
| 199 |
+
"eos_token": "<|im_end|>",
|
| 200 |
+
"errors": "replace",
|
| 201 |
+
"extra_special_tokens": {},
|
| 202 |
+
"model_max_length": 131072,
|
| 203 |
+
"pad_token": "<|endoftext|>",
|
| 204 |
+
"padding_side": "right",
|
| 205 |
+
"split_special_tokens": false,
|
| 206 |
+
"tokenizer_class": "Qwen2Tokenizer",
|
| 207 |
+
"unk_token": null
|
| 208 |
+
}
|
vocab.json
ADDED
|
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|
|
|