Synav
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Explainable-Acute-Leukemia-Mortality-Predictor

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Synav commited on Jan 22

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1 Parent(s): 9b823c7

Update latest metadata (20260122-154744)

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latest/meta.json +792 -510

latest/meta.json CHANGED Viewed

@@ -1,65 +1,509 @@
 {
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     "selection_method": "SelectFromModel(L1 saga, threshold=mean)",
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 }

 {
   "framework": "ExplainML Studio",
   "model": "Logistic Regression",
+  "created_at_utc": "2026-01-22T15:47:36.082221",
   "schema": {
     "features": [
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+      "Age (years) ",
       "Gender",
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+      "Type of Leukemia ",
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+      "Risk Assesment",
+      "WBCs on Admission\n ( x10^9/L) ",
+      "Hb on Admission  (g/L)",
+      "LDH on Admission (IU/L) ",
+      "CNS Involvement ",
+      "MDx Leukemia Screen 1",
+      "MDx Leukemia Screen 2",
+      "Pre-Induction bone marrow biopsy blasts %",
+      "Date of 1st Bone Marrow biopsy (Date of Diagnosis) ",
+      "Post-Induction  MRD ",
+      "Date of Bone Marrow Biopsy Post Induction ",
+      "Date of 1st CR",
+      "Induction ",
+      "Date of Induction Chemotherapy",
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+      "CD300e_intensity",
+      "CD304_intensity",
+      "cCD3_intensity",
+      "cCD22_intensity",
+      "cCD79a_intensity",
+      "sCD3_intensity",
+      "icCD3_intensity",
+      "icCD22_intensity",
+      "icCD79a_intensity",
+      "cyCD3_intensity",
+      "cyCD22_intensity",
+      "cyCD79a_intensity",
+      "HLA-DR_intensity",
+      "MPO_intensity",
+      "TdT_intensity",
+      "kappa_intensity",
+      "lambda_intensity",
+      "cp_fever",
+      "cp_sepsis",
+      "cp_infection",
+      "cp_anemia",
+      "cp_pancytopenia",
+      "cp_thrombocytopenia",
+      "cp_bleeding",
+      "cp_leukostasis",
+      "cp_organ_failure",
+      "cp_bsymptoms",
+      "cp_lymphadenopathy",
+      "cp_thrombosis",
+      "cp_cns",
+      "cp_pregnancy",
+      "cp_tls",
+      "cp_mass",
+      "cp_severity_score",
+      "emi_yes_unspecified",
+      "emi_lymphadenopathy",
+      "emi_abdominal_nodes",
+      "emi_hepatomegaly",
+      "emi_splenomegaly",
+      "emi_hepatosplenomegaly",
+      "emi_pleural_effusion",
+      "emi_pericardial_effusion",
+      "emi_ascites",
+      "emi_mediastinal_mass",
+      "emi_lung_nodules",
+      "emi_cns",
+      "emi_eye",
+      "emi_testis",
+      "emi_kidney",
+      "emi_skin",
+      "emi_bone_metastasis",
+      "emi_spinal_mass",
+      "emi_nasopharyngeal_mass",
+      "emi_any_site_flag",
+      "emi_severity_score",
+      "fish_normal",
+      "fish_inv16_cbfb_myh11",
+      "fish_t821_runx1_runx1t1",
+      "fish_t1517_pml_rara",
+      "fish_kmt2a_mll_11q23",
+      "fish_bcr_abl1_t922",
+      "fish_etv6_runx1_t1221",
+      "fish_tcf3_pbx1_t119",
+      "fish_igh_14q32_rearr",
+      "fish_myc_8q24",
+      "fish_crlf2_rearr",
+      "fish_nup214_9q34",
+      "fish_cdkn2a_9p21_del",
+      "fish_trisomy8",
+      "fish_del5q_monosomy5",
+      "fish_del7q_monosomy7",
+      "fish_tp53_del17p",
+      "fish_trisomy12",
+      "fish_del13q",
+      "fish_del11q",
+      "fish_missing",
+      "fish_any_abnormal",
+      "fish_abnormality_count",
+      "ngs_no_mutation",
+      "ngs_flt3_itd",
+      "ngs_flt3_tkd",
+      "ngs_npm1",
+      "ngs_cebpa",
+      "ngs_dnmt3a",
+      "ngs_idh1",
+      "ngs_idh2",
+      "ngs_tet2",
+      "ngs_asxl1",
+      "ngs_tp53",
+      "ngs_runx1",
+      "ngs_kit",
+      "ngs_ezh2",
+      "ngs_spliceosome",
+      "ngs_ikzf1",
+      "ngs_notch1",
+      "ngs_phf6",
+      "ngs_jak2",
+      "ngs_crlf2",
+      "ngs_calr",
+      "ngs_mpl",
+      "ngs_setbp1",
+      "ngs_any_mutation",
+      "ngs_mutation_count"
     ],
     "numeric": [
+      "Uniq_ID",
+      "Age (years) ",
+      "ECOG ",
+      "WBCs on Admission\n ( x10^9/L) ",
+      "Hb on Admission  (g/L)",
+      "LDH on Admission (IU/L) ",
+      "MDx Leukemia Screen 1",
+      "Pre-Induction bone marrow biopsy blasts %",
+      "Date of 1st Bone Marrow biopsy (Date of Diagnosis) ",
+      "Date of 1st CR",
+      "Date of Induction Chemotherapy",
+      "Date of Bone Marrow Biopsy Post Induction ",
+      "cp_severity_score",
+      "emi_severity_score",
+      "fish_abnormality_count",
+      "ngs_mutation_count"
     ],
     "categorical": [
       "Gender",
+      "Ethnicity ",
+      "Type of Leukemia ",
+      "Risk Assesment",
+      "CNS Involvement ",
+      "MDx Leukemia Screen 2",
+      "Post-Induction  MRD ",
+      "Induction ",
+      "CD1a",
+      "CD2",
+      "CD3",
+      "CD4",
+      "CD5",
+      "CD7",
+      "CD8",
+      "CD9",
+      "CD10",
+      "CD11b",
+      "CD11c",
+      "CD13",
+      "CD14",
+      "CD15",
+      "CD16",
+      "CD19",
+      "CD20",
+      "CD21",
+      "CD22",
+      "CD23",
+      "CD24",
+      "CD25",
+      "CD30",
+      "CD33",
+      "CD34",
+      "CD35",
+      "CD36",
+      "CD38",
+      "CD41",
+      "CD41a",
+      "CD42a",
+      "CD42b",
+      "CD43",
+      "CD45",
+      "CD56",
+      "CD57",
+      "CD58",
+      "CD61",
+      "CD64",
+      "CD66",
+      "CD66c",
+      "CD71",
+      "CD73",
+      "CD79",
+      "CD79a",
+      "CD81",
+      "CD99",
+      "CD103",
+      "CD105",
+      "CD117",
+      "CD123",
+      "CD138",
+      "CD163",
+      "CD200",
+      "CD300e",
+      "CD304",
+      "cCD3",
+      "cCD22",
+      "cCD79a",
+      "sCD3",
+      "icCD3",
+      "icCD22",
+      "icCD79a",
+      "cyCD3",
+      "cyCD22",
+      "cyCD79a",
+      "HLA-DR",
+      "MPO",
+      "TdT",
+      "kappa",
+      "lambda",
+      "CD1a_intensity",
+      "CD2_intensity",
+      "CD3_intensity",
+      "CD4_intensity",
+      "CD5_intensity",
+      "CD7_intensity",
+      "CD8_intensity",
+      "CD9_intensity",
+      "CD10_intensity",
+      "CD11b_intensity",
+      "CD11c_intensity",
+      "CD13_intensity",
+      "CD14_intensity",
+      "CD15_intensity",
+      "CD16_intensity",
+      "CD19_intensity",
+      "CD20_intensity",
+      "CD21_intensity",
+      "CD22_intensity",
+      "CD23_intensity",
+      "CD24_intensity",
+      "CD25_intensity",
+      "CD30_intensity",
+      "CD33_intensity",
+      "CD34_intensity",
+      "CD35_intensity",
+      "CD36_intensity",
+      "CD38_intensity",
+      "CD41_intensity",
+      "CD41a_intensity",
+      "CD42a_intensity",
+      "CD42b_intensity",
+      "CD43_intensity",
+      "CD45_intensity",
+      "CD56_intensity",
+      "CD57_intensity",
+      "CD58_intensity",
+      "CD61_intensity",
+      "CD64_intensity",
+      "CD66_intensity",
+      "CD66c_intensity",
+      "CD71_intensity",
+      "CD73_intensity",
+      "CD79_intensity",
+      "CD79a_intensity",
+      "CD81_intensity",
+      "CD99_intensity",
+      "CD103_intensity",
+      "CD105_intensity",
+      "CD117_intensity",
+      "CD123_intensity",
+      "CD138_intensity",
+      "CD163_intensity",
+      "CD200_intensity",
+      "CD300e_intensity",
+      "CD304_intensity",
+      "cCD3_intensity",
+      "cCD22_intensity",
+      "cCD79a_intensity",
+      "sCD3_intensity",
+      "icCD3_intensity",
+      "icCD22_intensity",
+      "icCD79a_intensity",
+      "cyCD3_intensity",
+      "cyCD22_intensity",
+      "cyCD79a_intensity",
+      "HLA-DR_intensity",
+      "MPO_intensity",
+      "TdT_intensity",
+      "kappa_intensity",
+      "lambda_intensity",
+      "cp_fever",
+      "cp_sepsis",
+      "cp_infection",
+      "cp_anemia",
+      "cp_pancytopenia",
+      "cp_thrombocytopenia",
+      "cp_bleeding",
+      "cp_leukostasis",
+      "cp_organ_failure",
+      "cp_bsymptoms",
+      "cp_lymphadenopathy",
+      "cp_thrombosis",
+      "cp_cns",
+      "cp_pregnancy",
+      "cp_tls",
+      "cp_mass",
+      "emi_yes_unspecified",
+      "emi_lymphadenopathy",
+      "emi_abdominal_nodes",
+      "emi_hepatomegaly",
+      "emi_splenomegaly",
+      "emi_hepatosplenomegaly",
+      "emi_pleural_effusion",
+      "emi_pericardial_effusion",
+      "emi_ascites",
+      "emi_mediastinal_mass",
+      "emi_lung_nodules",
+      "emi_cns",
+      "emi_eye",
+      "emi_testis",
+      "emi_kidney",
+      "emi_skin",
+      "emi_bone_metastasis",
+      "emi_spinal_mass",
+      "emi_nasopharyngeal_mass",
+      "emi_any_site_flag",
+      "fish_normal",
+      "fish_inv16_cbfb_myh11",
+      "fish_t821_runx1_runx1t1",
+      "fish_t1517_pml_rara",
+      "fish_kmt2a_mll_11q23",
+      "fish_bcr_abl1_t922",
+      "fish_etv6_runx1_t1221",
+      "fish_tcf3_pbx1_t119",
+      "fish_igh_14q32_rearr",
+      "fish_myc_8q24",
+      "fish_crlf2_rearr",
+      "fish_nup214_9q34",
+      "fish_cdkn2a_9p21_del",
+      "fish_trisomy8",
+      "fish_del5q_monosomy5",
+      "fish_del7q_monosomy7",
+      "fish_tp53_del17p",
+      "fish_trisomy12",
+      "fish_del13q",
+      "fish_del11q",
+      "fish_missing",
+      "fish_any_abnormal",
+      "ngs_no_mutation",
+      "ngs_flt3_itd",
+      "ngs_flt3_tkd",
+      "ngs_npm1",
+      "ngs_cebpa",
+      "ngs_dnmt3a",
+      "ngs_idh1",
+      "ngs_idh2",
+      "ngs_tet2",
+      "ngs_asxl1",
+      "ngs_tp53",
+      "ngs_runx1",
+      "ngs_kit",
+      "ngs_ezh2",
+      "ngs_spliceosome",
+      "ngs_ikzf1",
+      "ngs_notch1",
+      "ngs_phf6",
+      "ngs_jak2",
+      "ngs_crlf2",
+      "ngs_calr",
+      "ngs_mpl",
+      "ngs_setbp1",
+      "ngs_any_mutation"
     ],
     "label": "AA"
   },
     "selection_method": "SelectFromModel(L1 saga, threshold=mean)",
     "note": "If SVD is enabled, SHAP becomes component-level (less interpretable)."
   },
+  "positive_class": "YES",
   "metrics": {
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 }