Upload metadata (20260123-133858)
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releases/20260123-133858/meta.json
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| 1 |
+
{
|
| 2 |
+
"framework": "ExplainML Studio",
|
| 3 |
+
"model": "Logistic Regression",
|
| 4 |
+
"created_at_utc": "2026-01-23T13:37:30.028739",
|
| 5 |
+
"schema": {
|
| 6 |
+
"features": [
|
| 7 |
+
"Age (years) ",
|
| 8 |
+
"Gender",
|
| 9 |
+
"Ethnicity ",
|
| 10 |
+
"Type of Leukemia ",
|
| 11 |
+
"ECOG ",
|
| 12 |
+
"Risk Assesment",
|
| 13 |
+
"WBCs on Admission\n ( x10^9/L) ",
|
| 14 |
+
"Hb on Admission (g/L)",
|
| 15 |
+
"LDH on Admission (IU/L) ",
|
| 16 |
+
"CNS Involvement ",
|
| 17 |
+
"MDx Leukemia Screen 1",
|
| 18 |
+
"Pre-Induction bone marrow biopsy blasts %",
|
| 19 |
+
"Date of 1st Bone Marrow biopsy (Date of Diagnosis) ",
|
| 20 |
+
"Post-Induction MRD ",
|
| 21 |
+
"Date of 1st CR",
|
| 22 |
+
"Induction ",
|
| 23 |
+
"thrombocytopenia y=1/no=0",
|
| 24 |
+
"bleeding Y/N",
|
| 25 |
+
"B Sympt Y/N",
|
| 26 |
+
"Lymphadenopathy Y/N",
|
| 27 |
+
"CNS Y/N",
|
| 28 |
+
"ExtraMedullary Inv Y/N",
|
| 29 |
+
"fish_inv16_cbfb_myh11",
|
| 30 |
+
"fish_t821_runx1_runx1t1",
|
| 31 |
+
"fish_t1517_pml_rara",
|
| 32 |
+
"fish_kmt2a_mll_11q23",
|
| 33 |
+
"fish_bcr_abl1_t922",
|
| 34 |
+
"fish_etv6_runx1_t1221",
|
| 35 |
+
"fish_tcf3_pbx1_t119",
|
| 36 |
+
"fish_igh_14q32_rearr",
|
| 37 |
+
"fish_crlf2_rearr",
|
| 38 |
+
"fish_nup214_9q34",
|
| 39 |
+
"fish_Other",
|
| 40 |
+
"fish_del7q_monosomy7",
|
| 41 |
+
"fish_tp53_del17p",
|
| 42 |
+
"fish_del13q",
|
| 43 |
+
"fish_del11q",
|
| 44 |
+
"fish_abnormality_count",
|
| 45 |
+
"ngs_flt3",
|
| 46 |
+
"ngs_npm1",
|
| 47 |
+
"ngs_cebpa",
|
| 48 |
+
"ngs_dnmt3a",
|
| 49 |
+
"ngs_idh1",
|
| 50 |
+
"ngs_idh2",
|
| 51 |
+
"ngs_tet2",
|
| 52 |
+
"ngs_tp53",
|
| 53 |
+
"ngs_runx1",
|
| 54 |
+
"ngs_Other",
|
| 55 |
+
"ngs_spliceosome",
|
| 56 |
+
"ngs_mutation_count"
|
| 57 |
+
],
|
| 58 |
+
"numeric": [
|
| 59 |
+
"Age (years) ",
|
| 60 |
+
"WBCs on Admission\n ( x10^9/L) ",
|
| 61 |
+
"Hb on Admission (g/L)",
|
| 62 |
+
"LDH on Admission (IU/L) ",
|
| 63 |
+
"Pre-Induction bone marrow biopsy blasts %",
|
| 64 |
+
"Date of 1st Bone Marrow biopsy (Date of Diagnosis) ",
|
| 65 |
+
"Date of 1st CR",
|
| 66 |
+
"fish_abnormality_count",
|
| 67 |
+
"ngs_mutation_count"
|
| 68 |
+
],
|
| 69 |
+
"categorical": [
|
| 70 |
+
"Gender",
|
| 71 |
+
"Ethnicity ",
|
| 72 |
+
"Type of Leukemia ",
|
| 73 |
+
"ECOG ",
|
| 74 |
+
"Risk Assesment",
|
| 75 |
+
"CNS Involvement ",
|
| 76 |
+
"MDx Leukemia Screen 1",
|
| 77 |
+
"Post-Induction MRD ",
|
| 78 |
+
"Induction ",
|
| 79 |
+
"thrombocytopenia y=1/no=0",
|
| 80 |
+
"bleeding Y/N",
|
| 81 |
+
"B Sympt Y/N",
|
| 82 |
+
"Lymphadenopathy Y/N",
|
| 83 |
+
"CNS Y/N",
|
| 84 |
+
"ExtraMedullary Inv Y/N",
|
| 85 |
+
"fish_inv16_cbfb_myh11",
|
| 86 |
+
"fish_t821_runx1_runx1t1",
|
| 87 |
+
"fish_t1517_pml_rara",
|
| 88 |
+
"fish_kmt2a_mll_11q23",
|
| 89 |
+
"fish_bcr_abl1_t922",
|
| 90 |
+
"fish_etv6_runx1_t1221",
|
| 91 |
+
"fish_tcf3_pbx1_t119",
|
| 92 |
+
"fish_igh_14q32_rearr",
|
| 93 |
+
"fish_crlf2_rearr",
|
| 94 |
+
"fish_nup214_9q34",
|
| 95 |
+
"fish_Other",
|
| 96 |
+
"fish_del7q_monosomy7",
|
| 97 |
+
"fish_tp53_del17p",
|
| 98 |
+
"fish_del13q",
|
| 99 |
+
"fish_del11q",
|
| 100 |
+
"ngs_flt3",
|
| 101 |
+
"ngs_npm1",
|
| 102 |
+
"ngs_cebpa",
|
| 103 |
+
"ngs_dnmt3a",
|
| 104 |
+
"ngs_idh1",
|
| 105 |
+
"ngs_idh2",
|
| 106 |
+
"ngs_tet2",
|
| 107 |
+
"ngs_tp53",
|
| 108 |
+
"ngs_runx1",
|
| 109 |
+
"ngs_Other",
|
| 110 |
+
"ngs_spliceosome"
|
| 111 |
+
],
|
| 112 |
+
"label": "AA"
|
| 113 |
+
},
|
| 114 |
+
"feature_reduction": {
|
| 115 |
+
"variance_threshold": 0.0,
|
| 116 |
+
"use_dimred": false,
|
| 117 |
+
"svd_components": null,
|
| 118 |
+
"use_feature_selection": true,
|
| 119 |
+
"l1_C": 1.0,
|
| 120 |
+
"selection_method": "SelectFromModel(L1 saga, threshold=median)",
|
| 121 |
+
"note": "If SVD is enabled, SHAP becomes component-level (less interpretable)."
|
| 122 |
+
},
|
| 123 |
+
"positive_class": "YES",
|
| 124 |
+
"metrics": {
|
| 125 |
+
"roc_auc": 0.96,
|
| 126 |
+
"n_train": 79,
|
| 127 |
+
"n_test": 20,
|
| 128 |
+
"threshold@0.5": 0.5,
|
| 129 |
+
"accuracy@0.5": 0.85,
|
| 130 |
+
"balanced_accuracy@0.5": 0.7666666666666666,
|
| 131 |
+
"precision@0.5": 0.75,
|
| 132 |
+
"recall@0.5": 0.6,
|
| 133 |
+
"f1@0.5": 0.6666666666666666,
|
| 134 |
+
"sensitivity@0.5": 0.6,
|
| 135 |
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"specificity@0.5": 0.9333333333333333,
|
| 136 |
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"confusion_matrix@0.5": {
|
| 137 |
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"tn": 14,
|
| 138 |
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"fp": 1,
|
| 139 |
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"fn": 2,
|
| 140 |
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"tp": 3
|
| 141 |
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},
|
| 142 |
+
"best_threshold_by": "f1",
|
| 143 |
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"best_threshold": 0.38999999999999996,
|
| 144 |
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"best_f1": 0.9090909090909091,
|
| 145 |
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"accuracy@best": 0.95,
|
| 146 |
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"balanced_accuracy@best": 0.9666666666666667,
|
| 147 |
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"precision@best": 0.8333333333333334,
|
| 148 |
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"recall@best": 1.0,
|
| 149 |
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"f1@best": 0.9090909090909091,
|
| 150 |
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"sensitivity@best": 1.0,
|
| 151 |
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"specificity@best": 0.9333333333333333,
|
| 152 |
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"confusion_matrix@best": {
|
| 153 |
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"tn": 14,
|
| 154 |
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"fp": 1,
|
| 155 |
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"fn": 0,
|
| 156 |
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"tp": 5
|
| 157 |
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},
|
| 158 |
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"roc_curve": {
|
| 159 |
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"fpr": [
|
| 160 |
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0.0,
|
| 161 |
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0.0,
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| 162 |
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0.0,
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| 163 |
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0.06666666666666667,
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| 164 |
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0.06666666666666667,
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| 165 |
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1.0
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| 166 |
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],
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| 167 |
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"tpr": [
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| 168 |
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0.0,
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| 169 |
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| 170 |
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0.4,
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| 171 |
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| 172 |
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1.0,
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| 173 |
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| 174 |
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],
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| 175 |
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"thresholds": [
|
| 176 |
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Infinity,
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| 177 |
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0.9378254242686687,
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| 178 |
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| 179 |
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]
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| 183 |
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},
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| 184 |
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"pr_curve": {
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| 185 |
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"average_precision": 0.8766666666666667,
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| 186 |
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"precision": [
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| 187 |
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],
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