File size: 4,904 Bytes
7b5d9ba | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 | # PXDesign-Blackwell weights manifest (SHA256)
#
# Format: <sha256> <path relative to $PXDESIGN_WEIGHTS_ROOT>
# Used by: scripts/fetch_weights.sh, scripts/verify_mirror.sh, CI
#
# Generated from /data/proteus/weights-mirror on 2026-04-17.
# Upstream sources:
# - checkpoint/*.pt -> ByteDance TOS-Beijing (pxdesign.tos-cn-beijing.volces.com)
# except protenix-v2.pt which is HF (TMF001/protenix-v2-weights)
# - ccd_cache/* -> ByteDance TOS-Beijing (pxdesign.tos-cn-beijing.volces.com)
# - tool_weights/af2/* -> Google (storage.googleapis.com/alphafold/alphafold_params_2022-12-06.tar)
# - tool_weights/mpnn/* -> GitHub (github.com/dauparas/ProteinMPNN.git)
#
# All files verified idempotently. Lines beginning with "#" or empty lines are ignored.
# ---- 5 checkpoints ----
9ea20b0aba42f2256711da1d0cd081510a4b291e64375bff6b70ced70b87a5f1 checkpoint/protenix_base_default_v0.5.0.pt
3803340c5d9958c038e799ddd2b53b532db21855f261592ad455a5f003791f81 checkpoint/protenix_mini_default_v0.5.0.pt
221ca4da769e36ea0e2fa1fa82c46f6ca3a00bc7a1eff8ec0e3ddc02ed830474 checkpoint/protenix_mini_tmpl_v0.5.0.pt
8f931f9774a396b67033d0e58628e1834f4a1448165e04254b40a780b0c0d599 checkpoint/protenix-v2.pt
b075867bae942dc0c6487173736922b0e2913308c1ba542d227418b6e176478d checkpoint/pxdesign_v0.1.0.pt
# ---- 3 CCD cache files ----
7240b17369ccfbbcc86e2d02dc8c9db59f46c32e0420f58889c6c121c60bfef0 ccd_cache/components.v20240608.cif
2d6caced2d26c62015115a1d0a50f4106755a300e0c2a2d2b5c101c9038dcbcd ccd_cache/components.v20240608.cif.rdkit_mol.pkl
1ab4af905e75b382eda8dec59917dc3608bee0729e36b9e71baf860bbe86850c ccd_cache/clusters-by-entity-40.txt
# ---- AF2 params (16 files: 15 .npz + LICENSE) ----
9ba9550ad48438d0836ddab3da480b3b69ffa0aac7b7878b5a0039e7ab429411 tool_weights/af2/LICENSE
f95e453e6a290ddf317ba1c9698d53fa110cf007ea979b0eae43e6ad38b4e364 tool_weights/af2/params_model_1.npz
5e564f79af5bcd54ccef6e2a6bb0ff01015d01650ebc41d4575e35f0de9ecc84 tool_weights/af2/params_model_1_ptm.npz
611da8fc7478928f68de12e8b226260ef1f4ce62bcc29b008572e52f4f212959 tool_weights/af2/params_model_1_multimer_v3.npz
4da37ed3b71f08d935f913dfab0133977cd0d76ad37cd9333ff294d7fae43f87 tool_weights/af2/params_model_2.npz
23645d9a82c4af2ed54cd48a7b3c1c2575dc6aa9fe931adb4d7203ca5f0dc398 tool_weights/af2/params_model_2_ptm.npz
51362b0844382ae0f5720c59b81dd13a43eea40fbf9995dd2573bdab88865378 tool_weights/af2/params_model_2_multimer_v3.npz
3cc4584dc0b0d1bdd1f7af14bd0692d00df3aa0e738d0d1b314821ad7eee4ffe tool_weights/af2/params_model_3.npz
b53a724294cdd46a45d530b306bced8e429ffee74a4f9a2a897551b30966c415 tool_weights/af2/params_model_3_ptm.npz
46d9bcad288edc7ad5a6362ee8e5f84307a69712e00e6c36b1ef9daf96ebc9ce tool_weights/af2/params_model_3_multimer_v3.npz
b0a78b7e18661abc6097a905f48505004e6e3993c5dc41fb6820acf56e9c1d12 tool_weights/af2/params_model_4.npz
07d0e285ad1406ce3d91a2f6633a8ce9ee99155a53d24ee7783f8fd1e89f5d3a tool_weights/af2/params_model_4_ptm.npz
59bdabd2d69c07fe26b37882d544acbd1b9f89f196828f4220da49e0610b572c tool_weights/af2/params_model_4_multimer_v3.npz
5d261ec6e18ba87784541f5ce113570018b3338df61ae577661b6232358d47e7 tool_weights/af2/params_model_5.npz
2f8d0bd193e7d6e837958ba92acdc3f02b23b61bf841fa043fc076ee0e1996a5 tool_weights/af2/params_model_5_ptm.npz
917742be5a105d6b80f13f1f13f20459f27ec3fdcd34ea088b359f4502d6177f tool_weights/af2/params_model_5_multimer_v3.npz
# ---- MPNN weights (13 files across 3 subdirs) ----
ec038b44a987d7c8351b6ed887c82a2370d54e45e55a6bdaf508a729cef0340e tool_weights/mpnn/ca_model_weights/v_48_002.pt
cdb50498d45578d20b271fa7817b8cd8bfde3875ad69dbd3f5e4b5dd3e588301 tool_weights/mpnn/ca_model_weights/v_48_010.pt
f28f40170e21858c5ff31ef50b6e63414ff76dc331b19f85aa8586a12031744a tool_weights/mpnn/ca_model_weights/v_48_020.pt
6fd459eed9852cc12ca94cc33654b9a163f88d692a2caf7f9a428c937dc89b3b tool_weights/mpnn/soluble_model_weights/excluded_PDBs.csv
0877f840978fe770be6fcec025784d8f50c438571db3260c05e41aa207a7c448 tool_weights/mpnn/soluble_model_weights/v_48_002.pt
79562f7444f72c84595a1c96010713864865a616f4f3967633493041e169fa6e tool_weights/mpnn/soluble_model_weights/v_48_010.pt
7af52d090172c230c7f0e9d21e02203f6b3a38b16db58d3c7a3960e0a9a6e31a tool_weights/mpnn/soluble_model_weights/v_48_020.pt
1dd63f1e9fc68a133cc9ef859edf43b489e5ac581cb5624e0b9ec848ff062421 tool_weights/mpnn/soluble_model_weights/v_48_030.pt
925f2ca1007bf9b02e0e7f420ff00eb91f50fcc2722f64b42e644ae95adaa131 tool_weights/mpnn/vanilla_model_weights/v_48_002.pt
db866fae956a28661f926053d630610c55e9fc4bc03922f2aeeb98a37435ccce tool_weights/mpnn/vanilla_model_weights/v_48_010.pt
c9cb4a671d79604111231f8dbfc7c590e06f1197453b7a6854ac6661a642f5bd tool_weights/mpnn/vanilla_model_weights/v_48_020.pt
c34b7bfb38418ea30989fda3314f4781ac4e3920f9825731cf555f1fed44ac66 tool_weights/mpnn/vanilla_model_weights/v_48_030.pt
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