Delete run_config.json
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run_config.json
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{
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"concept_parquet": "/dgx1data/aii/tao/m338824/ADRD/code/normalization_agent/cache/snomedEL_with_synonyms_concepts.parquet",
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"eval_parquet": "/dgx1data/aii/tao/m338824/ADRD/code/normalization_agent/data/SNOMED_EL/test.parquet",
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"synthetic_variants_parquet": "/dgx1data/aii/tao/m338824/ADRD/code/normalization_agent/increase_recall/optionA_cache/synthetic_variants.parquet",
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"output_dir": "/dgx1data/aii/tao/m338824/ADRD/code/normalization_agent/increase_recall/optionA_cache/noise_model_output/20260217_105255_pnoisy0.8_ep1_lr1e-05",
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"base_model": "cambridgeltl/SapBERT-from-PubMedBERT-fulltext",
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"abbrev_json": "/dgx1data/aii/tao/m338824/ADRD/code/normalization_agent/increase_recall/clean_abbrev_map.json",
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"abbrev_keep_ambiguous": false,
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"abbrev_max_per_concept": 20,
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"max_syn_train": 10,
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"p_noisy": 0.8,
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"batch_size": 256,
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"epochs": 1,
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"lr": 1e-05,
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"max_seq_len": 64,
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"seed": 13,
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"max_syn_index": 20,
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"top_k_eval": 1000,
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"sample_frac": 1.0
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}
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