Valentin Boussot
commited on
Commit
·
5f505a1
1
Parent(s):
adb27cf
Add images registration evaluation files
Browse files- ImpactReg/Evaluation_with_fid.yml +22 -0
- ImpactReg/Evaluation_with_images.yml +29 -0
- ImpactReg/Evaluation_with_seg.yml +29 -0
- ImpactReg/Uncertainty.yml +23 -0
- ImpactReg/metadata.json +7 -0
ImpactReg/Evaluation_with_fid.yml
ADDED
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@@ -0,0 +1,22 @@
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Evaluator:
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metrics:
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FixedFid:
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targets_criterions:
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MovingFid:
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criterions_loader:
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TRE: {}
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Dataset:
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groups_src:
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Volume_0:
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groups_dest:
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FixedFid:
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transforms: None
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Reference_0:
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groups_dest:
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MovingFid:
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transforms: None
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subset: None
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dataset_filenames:
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- ./Dataset:mha
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validation: None
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train_name: ImpactReg
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ImpactReg/Evaluation_with_images.yml
ADDED
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@@ -0,0 +1,29 @@
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Evaluator:
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metrics:
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FixedImage:
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targets_criterions:
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MovingImage:
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criterions_loader:
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MAESaveMap:
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reduction: mean
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dataset: ./Evaluations/ImpactReg/Output:mha
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group: MAE_map
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Dataset:
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groups_src:
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Volume_0:
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groups_dest:
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FixedImage:
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transforms:
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TensorCast:
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dtype: float32
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Reference_0:
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groups_dest:
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MovingImage:
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transforms:
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TensorCast:
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dtype: float32
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subset: None
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dataset_filenames:
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- ./Dataset:mha
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validation: None
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train_name: ImpactReg
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ImpactReg/Evaluation_with_seg.yml
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@@ -0,0 +1,29 @@
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Evaluator:
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metrics:
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FixedSeg:
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targets_criterions:
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MovingSeg:
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criterions_loader:
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DiceSaveMap:
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labels: None
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dataset: ./Evaluations/ImpactReg/Output:mha
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group: Seg_MAE_map
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Dataset:
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groups_src:
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Volume_0:
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groups_dest:
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FixedSeg:
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transforms:
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TensorCast:
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dtype: uint8
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Reference_0:
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groups_dest:
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MovingSeg:
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transforms:
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TensorCast:
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dtype: uint8
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subset: None
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dataset_filenames:
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- ./Dataset:mha
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validation: None
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train_name: ImpactReg
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ImpactReg/Uncertainty.yml
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Evaluator:
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metrics:
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Uncertainty:
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targets_criterions:
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None:
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criterions_loader:
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Mean:
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name: Uncertainty
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Dataset:
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groups_src:
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Volume_0:
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groups_dest:
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Uncertainty:
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transforms:
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Variance: {}
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Save:
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dataset: ./Evaluations/ImpactReg/Output:mha
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group: None
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subset: None
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dataset_filenames:
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- ./Dataset:mha
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validation: None
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train_name: ImpactReg
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ImpactReg/metadata.json
ADDED
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@@ -0,0 +1,7 @@
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{
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"display_name": "ImpactReg",
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"short_description": "",
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"description": "",
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"tta": 2,
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"mc_dropout": false
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}
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