Valentin Boussot commited on
Commit
5f505a1
·
1 Parent(s): adb27cf

Add images registration evaluation files

Browse files
ImpactReg/Evaluation_with_fid.yml ADDED
@@ -0,0 +1,22 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluator:
2
+ metrics:
3
+ FixedFid:
4
+ targets_criterions:
5
+ MovingFid:
6
+ criterions_loader:
7
+ TRE: {}
8
+ Dataset:
9
+ groups_src:
10
+ Volume_0:
11
+ groups_dest:
12
+ FixedFid:
13
+ transforms: None
14
+ Reference_0:
15
+ groups_dest:
16
+ MovingFid:
17
+ transforms: None
18
+ subset: None
19
+ dataset_filenames:
20
+ - ./Dataset:mha
21
+ validation: None
22
+ train_name: ImpactReg
ImpactReg/Evaluation_with_images.yml ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluator:
2
+ metrics:
3
+ FixedImage:
4
+ targets_criterions:
5
+ MovingImage:
6
+ criterions_loader:
7
+ MAESaveMap:
8
+ reduction: mean
9
+ dataset: ./Evaluations/ImpactReg/Output:mha
10
+ group: MAE_map
11
+ Dataset:
12
+ groups_src:
13
+ Volume_0:
14
+ groups_dest:
15
+ FixedImage:
16
+ transforms:
17
+ TensorCast:
18
+ dtype: float32
19
+ Reference_0:
20
+ groups_dest:
21
+ MovingImage:
22
+ transforms:
23
+ TensorCast:
24
+ dtype: float32
25
+ subset: None
26
+ dataset_filenames:
27
+ - ./Dataset:mha
28
+ validation: None
29
+ train_name: ImpactReg
ImpactReg/Evaluation_with_seg.yml ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluator:
2
+ metrics:
3
+ FixedSeg:
4
+ targets_criterions:
5
+ MovingSeg:
6
+ criterions_loader:
7
+ DiceSaveMap:
8
+ labels: None
9
+ dataset: ./Evaluations/ImpactReg/Output:mha
10
+ group: Seg_MAE_map
11
+ Dataset:
12
+ groups_src:
13
+ Volume_0:
14
+ groups_dest:
15
+ FixedSeg:
16
+ transforms:
17
+ TensorCast:
18
+ dtype: uint8
19
+ Reference_0:
20
+ groups_dest:
21
+ MovingSeg:
22
+ transforms:
23
+ TensorCast:
24
+ dtype: uint8
25
+ subset: None
26
+ dataset_filenames:
27
+ - ./Dataset:mha
28
+ validation: None
29
+ train_name: ImpactReg
ImpactReg/Uncertainty.yml ADDED
@@ -0,0 +1,23 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluator:
2
+ metrics:
3
+ Uncertainty:
4
+ targets_criterions:
5
+ None:
6
+ criterions_loader:
7
+ Mean:
8
+ name: Uncertainty
9
+ Dataset:
10
+ groups_src:
11
+ Volume_0:
12
+ groups_dest:
13
+ Uncertainty:
14
+ transforms:
15
+ Variance: {}
16
+ Save:
17
+ dataset: ./Evaluations/ImpactReg/Output:mha
18
+ group: None
19
+ subset: None
20
+ dataset_filenames:
21
+ - ./Dataset:mha
22
+ validation: None
23
+ train_name: ImpactReg
ImpactReg/metadata.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "display_name": "ImpactReg",
3
+ "short_description": "",
4
+ "description": "",
5
+ "tta": 2,
6
+ "mc_dropout": false
7
+ }