Block-level UNetPlusPlus.yml + Tanh + clean-key checkpoints (forward-exact 0.0)
Browse files- Finetune/CV_0.pt +2 -2
- Finetune/CV_1.pt +2 -2
- Finetune/CV_2.pt +2 -2
- Finetune/CV_3.pt +2 -2
- Finetune/CV_4.pt +2 -2
- Finetune/Config.yml +3 -63
- Finetune/Prediction.yml +2 -2
- Finetune/UNetPlusPlus.yml +249 -0
Finetune/CV_0.pt
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Finetune/Config.yml
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Trainer:
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Model:
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classpath:
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outputs_criterions:
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Head:Tanh:
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targets_criterions:
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CT:
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criterions_loader:
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MAE:
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schedulers:
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Constant:
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nb_step: 0
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value: 1
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is_loss: true
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group: 0
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start: 0
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stop: None
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accumulation: false
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reduction: mean
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SAM_Perceptual:
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train: true
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weights: [0, 1, 1, 0]
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schedulers:
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Constant:
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nb_step: 0
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value: 0.5
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is_loss: true
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group: 0
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start: 0
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stop: None
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accumulation: false
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CT;MASK:
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criterions_loader:
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MAE:
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schedulers:
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Constant:
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nb_step: 0
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value: 1
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is_loss: false
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group: 0
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start: 0
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stop: None
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accumulation: false
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reduction: mean
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schedulers:
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PolyLRScheduler:
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initial_lr: 0.01
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max_steps: 500
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exponent: 0.9
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current_step: 0
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nb_step: 0
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Patch: None
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optimizer:
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name: SGD
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lr: 0.01
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momentum: 0.99
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dampening: 0
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weight_decay: 3e-05
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nesterov: true
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maximize: false
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foreach: None
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differentiable: false
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fused: None
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nb_channel: 5
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Dataset:
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groups_src:
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MASK:
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Trainer:
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Model:
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classpath: UNetPlusPlus.yml
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UNetPlusPlus:
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outputs_criterions: None
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Dataset:
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groups_src:
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MASK:
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Finetune/Prediction.yml
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Predictor:
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Model:
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classpath:
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-
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outputs_criterions: None
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Dataset:
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groups_src:
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Predictor:
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Model:
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classpath: UNetPlusPlus.yml
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UNetPlusPlus:
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outputs_criterions: None
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Dataset:
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groups_src:
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Finetune/UNetPlusPlus.yml
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| 1 |
+
# Declarative KonfAI UNetPlusPlus -- weight- and forward-exact with smp.UnetPlusPlus (ResNet encoder).
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| 2 |
+
#
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| 3 |
+
# This graph reproduces, block-for-block and in forward-execution order, the network built by
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+
# `segmentation_models_pytorch.UnetPlusPlus(encoder_name="resnet34", encoder_weights=None,
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| 5 |
+
# in_channels=5, classes=1, activation=None)` -- the exact ImpactSynth "MR" backbone: a torchvision
|
| 6 |
+
# ResNet-34 encoder feeding a UNet++ nested (dense) decoder. It is the declarative twin of the
|
| 7 |
+
# parametric `konfai.models.python.segmentation.unetplusplus.UNetPlusPlus`. Because the weighted
|
| 8 |
+
# leaves execute in exactly the same sequence as the reference, a REAL smp checkpoint of this
|
| 9 |
+
# topology loads straight into this KonfAI model through the execution-order bridge
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| 10 |
+
# `konfai.utils.pretrained.transfer_weights_by_execution_order`, and the KonfAI logits are
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| 11 |
+
# `torch.allclose` with the reference output (see tests/unit/test_unetplusplus_yaml.py, which
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| 12 |
+
# transfers the parametric UNetPlusPlus's weights in and checks maxdiff < 1e-4).
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| 13 |
+
#
|
| 14 |
+
# It is authored at the BLOCK level from two generic, registry-backed composite blocks -- so the
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| 15 |
+
# whole graph reads as the architecture's topology (encoder stages + the UNet++ decoder grid + head),
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| 16 |
+
# not a conv-by-conv unroll:
|
| 17 |
+
#
|
| 18 |
+
# * `ResNetStage` = one encoder resolution stage: a stack of `n_blocks` torchvision `BasicBlock`
|
| 19 |
+
# (`ResNetBasicBlock`). Its FIRST block carries the stage stride (strided-conv downsampling; the
|
| 20 |
+
# `1x1` projection skip is built automatically when stride or channels change) and the channel
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| 21 |
+
# change; the rest are stride 1. conv_bias=False, BatchNorm -- the torchvision ResNet convention.
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| 22 |
+
# * `UNetPlusPlusNode` = one UNet++ dense-grid node `x_{d}_{l}`, a MULTI-input node
|
| 23 |
+
# `in_branch: [coarser, skip_0, skip_1, ...]`: nearest-neighbour upsample of the shallower-column
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| 24 |
+
# predecessor, a Concat of the upsampled feature FIRST then every same-resolution dense skip and the
|
| 25 |
+
# encoder skip (smp order), then two `Conv(3x3) -> BatchNorm -> ReLU` blocks (smp's `Conv2dReLU`).
|
| 26 |
+
# `skip_channels` lists the per-skip widths in `in_branch` order: its length wires the concat and its
|
| 27 |
+
# sum fixes the conv input width `up_channels + sum(skip_channels)`. The final full-resolution node
|
| 28 |
+
# has no skip.
|
| 29 |
+
#
|
| 30 |
+
# ENCODER (ResNet-34): a stem `Conv(7x7, stride 2) -> BatchNorm -> ReLU` (`enc_c1`, 64ch, 1/2 res) and a
|
| 31 |
+
# `MaxPool(3, stride 2)`, then four `ResNetStage`s with block counts [3, 4, 6, 3] and widths
|
| 32 |
+
# [64, 128, 256, 512] (`enc_l1..enc_l4`, 1/4..1/32 res). The five features consumed by the decoder are
|
| 33 |
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# `enc_c1` and `enc_l1..enc_l4`. (resnet18 = block counts [2, 2, 2, 2], same widths.)
|
| 34 |
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#
|
| 35 |
+
# DECODER channel table (smp's UnetPlusPlusDecoder arithmetic for a BasicBlock ResNet encoder). A
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| 36 |
+
# declarative YAML cannot compute the dense-grid channel recurrence, so the widths are written
|
| 37 |
+
# explicitly per node; `up_channels + sum(skip_channels) -> out_channels` is the node's `Conv2dReLU`
|
| 38 |
+
# input/output. `dx_d_l` is the branch holding node `x_{d}_{l}`:
|
| 39 |
+
#
|
| 40 |
+
# node in_branch (coarser, skips...) up + skips = conv_in -> out
|
| 41 |
+
# x_0_0 enc_l4, enc_l3 512 + [256] = 768 -> 256
|
| 42 |
+
# x_1_1 enc_l3, enc_l2 256 + [128] = 384 -> 128
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| 43 |
+
# x_2_2 enc_l2, enc_l1 128 + [64] = 192 -> 64
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| 44 |
+
# x_3_3 enc_l1, enc_c1 64 + [64] = 128 -> 64
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| 45 |
+
# x_0_1 dx_0_0, dx_1_1, enc_l2 256 + [128,128] = 512 -> 128
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| 46 |
+
# x_1_2 dx_1_1, dx_2_2, enc_l1 128 + [64,64] = 256 -> 64
|
| 47 |
+
# x_2_3 dx_2_2, dx_3_3, enc_c1 64 + [64,64] = 192 -> 64
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| 48 |
+
# x_0_2 dx_0_1, dx_1_2, dx_2_2, enc_l1 128 + [64,64,64] = 320 -> 64
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| 49 |
+
# x_1_3 dx_1_2, dx_2_3, dx_3_3, enc_c1 64 + [64,64,64] = 256 -> 64
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| 50 |
+
# x_0_3 dx_0_2, dx_1_3, dx_2_3, dx_3_3, enc_c1 64 + [64,64,64,64]= 320 -> 32
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| 51 |
+
# x_0_4 dx_0_3 32 + [] = 32 -> 16
|
| 52 |
+
#
|
| 53 |
+
# A `Conv(3x3)` segmentation head emits raw logits (activation=None -> the weight-exact comparison
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| 54 |
+
# point). The nodes below are declared in smp forward-execution order so the 117 weighted leaves (72
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| 55 |
+
# encoder + 44 decoder + 1 head) pair one-to-one with the reference.
|
| 56 |
+
#
|
| 57 |
+
# FIXED DEPTH / ENCODER: a declarative YAML cannot loop, so the 4 encoder stages + 11 decoder nodes and
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| 58 |
+
# the decoder channel table are structural (this file is the resnet18/34 BasicBlock topology). `dim`,
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| 59 |
+
# `in_channels`, `num_classes`, `stem_channels`, `stage_channels` and `n_blocks_per_stage` stay
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| 60 |
+
# parametric; retargeting another BasicBlock encoder means editing `n_blocks_per_stage` (e.g. resnet18)
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| 61 |
+
# and, for different widths, recomputing the decoder table above.
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| 62 |
+
#
|
| 63 |
+
# Use it as a KonfAI model classpath:
|
| 64 |
+
# classpath: default|UNetPlusPlus.yml # shipped catalog copy
|
| 65 |
+
# classpath: /path/to/UNetPlusPlus.yml # any local copy
|
| 66 |
+
name: UNetPlusPlus
|
| 67 |
+
|
| 68 |
+
parameters:
|
| 69 |
+
dim: 2
|
| 70 |
+
in_channels: 5
|
| 71 |
+
num_classes: 1
|
| 72 |
+
# torchvision ResNet-34 stem width and stage planes (enc_l1..enc_l4).
|
| 73 |
+
stem_channels: 64
|
| 74 |
+
stage_channels: [64, 128, 256, 512]
|
| 75 |
+
# BasicBlock counts per encoder stage (resnet34 = [3, 4, 6, 3]; resnet18 = [2, 2, 2, 2]).
|
| 76 |
+
n_blocks_per_stage: [3, 4, 6, 3]
|
| 77 |
+
|
| 78 |
+
network:
|
| 79 |
+
in_channels: ${in_channels}
|
| 80 |
+
dim: ${dim}
|
| 81 |
+
|
| 82 |
+
modules:
|
| 83 |
+
# ===== Encoder: ResNet-34 stem + four BasicBlock stages =======================
|
| 84 |
+
# Stem: Conv(7x7, s2) -> BatchNorm -> ReLU (enc_c1, a decoder skip at 1/2 res), then MaxPool.
|
| 85 |
+
- name: Stem
|
| 86 |
+
type: ConvBlock
|
| 87 |
+
in_branch: [0]
|
| 88 |
+
out_branch: [enc_c1]
|
| 89 |
+
args:
|
| 90 |
+
dim: ${dim}
|
| 91 |
+
in_channels: ${in_channels}
|
| 92 |
+
out_channels: ${stem_channels}
|
| 93 |
+
block_configs:
|
| 94 |
+
- $object: BlockConfig
|
| 95 |
+
args:
|
| 96 |
+
kernel_size: 7
|
| 97 |
+
stride: 2
|
| 98 |
+
padding: 3
|
| 99 |
+
bias: false
|
| 100 |
+
activation: ReLU
|
| 101 |
+
norm_mode: BATCH
|
| 102 |
+
- name: StemMaxPool
|
| 103 |
+
type: MaxPool
|
| 104 |
+
in_branch: [enc_c1]
|
| 105 |
+
out_branch: [enc_mp]
|
| 106 |
+
args:
|
| 107 |
+
dim: ${dim}
|
| 108 |
+
kernel_size: 3
|
| 109 |
+
stride: 2
|
| 110 |
+
padding: 1
|
| 111 |
+
|
| 112 |
+
# Residual stages; each output enc_l1..enc_l4 is a decoder skip. Stage 1 follows the maxpool at
|
| 113 |
+
# 1/4 and never strides; stages 2-4 stride their first block (downsampling + channel change).
|
| 114 |
+
- name: Encoder_1
|
| 115 |
+
type: ResNetStage
|
| 116 |
+
in_branch: [enc_mp]
|
| 117 |
+
out_branch: [enc_l1]
|
| 118 |
+
args:
|
| 119 |
+
dim: ${dim}
|
| 120 |
+
in_channels: ${stem_channels}
|
| 121 |
+
out_channels: ${stage_channels.0}
|
| 122 |
+
n_blocks: ${n_blocks_per_stage.0}
|
| 123 |
+
stride: 1
|
| 124 |
+
- name: Encoder_2
|
| 125 |
+
type: ResNetStage
|
| 126 |
+
in_branch: [enc_l1]
|
| 127 |
+
out_branch: [enc_l2]
|
| 128 |
+
args:
|
| 129 |
+
dim: ${dim}
|
| 130 |
+
in_channels: ${stage_channels.0}
|
| 131 |
+
out_channels: ${stage_channels.1}
|
| 132 |
+
n_blocks: ${n_blocks_per_stage.1}
|
| 133 |
+
stride: 2
|
| 134 |
+
- name: Encoder_3
|
| 135 |
+
type: ResNetStage
|
| 136 |
+
in_branch: [enc_l2]
|
| 137 |
+
out_branch: [enc_l3]
|
| 138 |
+
args:
|
| 139 |
+
dim: ${dim}
|
| 140 |
+
in_channels: ${stage_channels.1}
|
| 141 |
+
out_channels: ${stage_channels.2}
|
| 142 |
+
n_blocks: ${n_blocks_per_stage.2}
|
| 143 |
+
stride: 2
|
| 144 |
+
- name: Encoder_4
|
| 145 |
+
type: ResNetStage
|
| 146 |
+
in_branch: [enc_l3]
|
| 147 |
+
out_branch: [enc_l4]
|
| 148 |
+
args:
|
| 149 |
+
dim: ${dim}
|
| 150 |
+
in_channels: ${stage_channels.2}
|
| 151 |
+
out_channels: ${stage_channels.3}
|
| 152 |
+
n_blocks: ${n_blocks_per_stage.3}
|
| 153 |
+
stride: 2
|
| 154 |
+
|
| 155 |
+
# ===== UNet++ nested decoder grid (smp forward-execution order) ===============
|
| 156 |
+
# --- Column l = d (the diagonal): upsample encoder feat[d], concat encoder feat[d+1] ---
|
| 157 |
+
- name: x_0_0
|
| 158 |
+
type: UNetPlusPlusNode
|
| 159 |
+
in_branch: [enc_l4, enc_l3]
|
| 160 |
+
out_branch: [dx_0_0]
|
| 161 |
+
args: {dim: "${dim}", up_channels: 512, skip_channels: [256], out_channels:
|
| 162 |
+
256}
|
| 163 |
+
- name: x_1_1
|
| 164 |
+
type: UNetPlusPlusNode
|
| 165 |
+
in_branch: [enc_l3, enc_l2]
|
| 166 |
+
out_branch: [dx_1_1]
|
| 167 |
+
args: {dim: "${dim}", up_channels: 256, skip_channels: [128], out_channels:
|
| 168 |
+
128}
|
| 169 |
+
- name: x_2_2
|
| 170 |
+
type: UNetPlusPlusNode
|
| 171 |
+
in_branch: [enc_l2, enc_l1]
|
| 172 |
+
out_branch: [dx_2_2]
|
| 173 |
+
args: {dim: "${dim}", up_channels: 128, skip_channels: [64], out_channels: 64}
|
| 174 |
+
- name: x_3_3
|
| 175 |
+
type: UNetPlusPlusNode
|
| 176 |
+
in_branch: [enc_l1, enc_c1]
|
| 177 |
+
out_branch: [dx_3_3]
|
| 178 |
+
args: {dim: "${dim}", up_channels: 64, skip_channels: [64], out_channels: 64}
|
| 179 |
+
|
| 180 |
+
# --- Dense column l = d + 1 ---
|
| 181 |
+
- name: x_0_1
|
| 182 |
+
type: UNetPlusPlusNode
|
| 183 |
+
in_branch: [dx_0_0, dx_1_1, enc_l2]
|
| 184 |
+
out_branch: [dx_0_1]
|
| 185 |
+
args: {dim: "${dim}", up_channels: 256, skip_channels: [128, 128],
|
| 186 |
+
out_channels: 128}
|
| 187 |
+
- name: x_1_2
|
| 188 |
+
type: UNetPlusPlusNode
|
| 189 |
+
in_branch: [dx_1_1, dx_2_2, enc_l1]
|
| 190 |
+
out_branch: [dx_1_2]
|
| 191 |
+
args: {dim: "${dim}", up_channels: 128, skip_channels: [64, 64], out_channels:
|
| 192 |
+
64}
|
| 193 |
+
- name: x_2_3
|
| 194 |
+
type: UNetPlusPlusNode
|
| 195 |
+
in_branch: [dx_2_2, dx_3_3, enc_c1]
|
| 196 |
+
out_branch: [dx_2_3]
|
| 197 |
+
args: {dim: "${dim}", up_channels: 64, skip_channels: [64, 64], out_channels:
|
| 198 |
+
64}
|
| 199 |
+
|
| 200 |
+
# --- Dense column l = d + 2 ---
|
| 201 |
+
- name: x_0_2
|
| 202 |
+
type: UNetPlusPlusNode
|
| 203 |
+
in_branch: [dx_0_1, dx_1_2, dx_2_2, enc_l1]
|
| 204 |
+
out_branch: [dx_0_2]
|
| 205 |
+
args: {dim: "${dim}", up_channels: 128, skip_channels: [64, 64, 64],
|
| 206 |
+
out_channels: 64}
|
| 207 |
+
- name: x_1_3
|
| 208 |
+
type: UNetPlusPlusNode
|
| 209 |
+
in_branch: [dx_1_2, dx_2_3, dx_3_3, enc_c1]
|
| 210 |
+
out_branch: [dx_1_3]
|
| 211 |
+
args: {dim: "${dim}", up_channels: 64, skip_channels: [64, 64, 64],
|
| 212 |
+
out_channels: 64}
|
| 213 |
+
|
| 214 |
+
# --- Dense column l = d + 3 ---
|
| 215 |
+
- name: x_0_3
|
| 216 |
+
type: UNetPlusPlusNode
|
| 217 |
+
in_branch: [dx_0_2, dx_1_3, dx_2_3, dx_3_3, enc_c1]
|
| 218 |
+
out_branch: [dx_0_3]
|
| 219 |
+
args: {dim: "${dim}", up_channels: 64, skip_channels: [64, 64, 64, 64],
|
| 220 |
+
out_channels: 32}
|
| 221 |
+
|
| 222 |
+
# --- Final full-resolution node (no skip: smp DecoderBlock(in, 0, out)) ---
|
| 223 |
+
- name: x_0_4
|
| 224 |
+
type: UNetPlusPlusNode
|
| 225 |
+
in_branch: [dx_0_3]
|
| 226 |
+
out_branch: [dx_0_4]
|
| 227 |
+
args: {dim: "${dim}", up_channels: 32, skip_channels: [], out_channels: 16}
|
| 228 |
+
|
| 229 |
+
# ===== Segmentation head (activation=None -> raw logits) =======================
|
| 230 |
+
- name: SegmentationHead
|
| 231 |
+
type: Conv
|
| 232 |
+
in_branch: [dx_0_4]
|
| 233 |
+
out_branch:
|
| 234 |
+
- logits
|
| 235 |
+
args:
|
| 236 |
+
dim: ${dim}
|
| 237 |
+
in_channels: 16
|
| 238 |
+
out_channels: ${num_classes}
|
| 239 |
+
kernel_size: 3
|
| 240 |
+
stride: 1
|
| 241 |
+
padding: 1
|
| 242 |
+
bias: true
|
| 243 |
+
- name: Tanh
|
| 244 |
+
type: Tanh
|
| 245 |
+
in_branch:
|
| 246 |
+
- logits
|
| 247 |
+
out_branch:
|
| 248 |
+
- -1
|
| 249 |
+
args: {}
|