Update total_mr-3mm/app.json

total_mr-3mm/app.json

@@ -3,5 +3,57 @@
     "short_description": "<b>Description:</b><br>Lightweight KonfAI adaptation of <a href='https://github.com/wasserth/TotalSegmentator'>TotalSegmentator MRI</a>, enabling fast multimodal segmentation of <b>50 key anatomical structures</b> from <b>MRI and CT</b> scans at <b>3 mm</b> resolution, greatly reducing memory usage and inference time compared to the original nnU-Net workflow.<br><br><b>How to cite:</b><br><cite>T. Akinci D’Antonoli et al., <i>TotalSegmentator MRI: Robust Sequence-Independent Segmentation of Multiple Anatomic Structures in MRI</i>, Radiology, 2025.</cite>",
     "description": "<b>Description:</b><br>This model integrates the reduced-resolution MRI-3mm configuration of TotalSegmentator into the <b>KonfAI</b> accelerated inference pipeline for efficient MRI/CT deployment.<br><br><b>Capabilities:</b><br>• Segmentation of <b>50 essential anatomical structures</b> (major organs, key bones, large vessels)<br>• <b>3 mm</b> isotropic input for high-throughput processing and lower GPU requirements<br>• Robust to acquisition variability including scanner type, contrast, and sequence parameters<br><br><b>Training data:</b><br>Trained on a diverse cohort of <b>1143 clinical scans</b> including <b>616 MRI</b> (multi-site, multi-scanner, multi-sequence) and <b>527 CT</b>, with expert-validated reference masks<br><br>><b>How to cite:</b><br><cite>T. Akinci D’Antonoli et al., <i>TotalSegmentator MRI: Robust Sequence-Independent Segmentation of Multiple Anatomic Structures in MRI</i>, Radiology, 2025.</cite>",
     "tta": 0,
-    "mc_dropout": 0
+    "mc_dropout": 0,
+    "terminology": {
+        "1": "spleen",
+        "2": "kidney_right",
+        "3": "kidney_left",
+        "4": "gallbladder",
+        "5": "liver",
+        "6": "stomach",
+        "7": "pancreas",
+        "8": "adrenal_gland_right",
+        "9": "adrenal_gland_left",
+        "10": "lung_left",
+        "11": "lung_right",
+        "12": "esophagus",
+        "13": "small_bowel",
+        "14": "duodenum",
+        "15": "colon",
+        "16": "urinary_bladder",
+        "17": "prostate",
+        "18": "sacrum",
+        "19": "vertebrae",
+        "20": "intervertebral_discs",
+        "21": "spinal_cord",
+        "22": "heart",
+        "23": "aorta",
+        "24": "inferior_vena_cava",
+        "25": "portal_vein_and_splenic_vein",
+        "26": "iliac_artery_left",
+        "27": "iliac_artery_right",
+        "28": "iliac_vena_left",
+        "29": "iliac_vena_right",
+        "30": "humerus_left",
+        "31": "humerus_right",
+        "32": "scapula_left",
+        "33": "scapula_right",
+        "34": "clavicula_left",
+        "35": "clavicula_right",
+        "36": "femur_left",
+        "37": "femur_right",
+        "38": "hip_left",
+        "39": "hip_right",
+        "40": "gluteus_maximus_left",
+        "41": "gluteus_maximus_right",
+        "42": "gluteus_medius_left",
+        "43": "gluteus_medius_right",
+        "44": "gluteus_minimus_left",
+        "45": "gluteus_minimus_right",
+        "46": "autochthon_left",
+        "47": "autochthon_right",
+        "48": "iliopsoas_left",
+        "49": "iliopsoas_right",
+        "50": "brain",
+    }
 }