Update total-3mm/app.json

total-3mm/app.json

@@ -3,5 +3,124 @@
     "short_description": "<b>Description:</b><br>Lightweight KonfAI adaptation of <a href='https://github.com/wasserth/TotalSegmentator'>TotalSegmentator</a> trained at <b>3 mm resolution</b>, reducing GPU/RAM requirements while segmenting <b>118 anatomical structures</b> in whole-body CT.<br><br><b>How to cite:</b><br><cite>J. Wasserthal et al., <i>TotalSegmentator: Robust Segmentation of 104 Anatomical Structures in CT Images</i>, Radiology: AI, 2023.</cite>",
     "description": "<b>Description:</b><br>KonfAI-optimized version of the original nnU-Net-based TotalSegmentator 3 mm model.<br><br><b>Capabilities:</b><br>• Whole-body CT segmentation of <b>118 structures</b> (organs, bones, muscles, vessels)<br>• Reduced computational footprint for lower memory and faster throughput<br>• <b>3 mm isotropic</b> inference for easier deployment on large datasets<br><br><b>Training data:</b><br>Trained on <b>1204 clinically-derived CT scans</b> with strong diversity in contrast phases, scanner types and pathologies, with expert-reviewed manual annotations<br><br><b>How to cite:</b><br><cite>J. Wasserthal et al., <i>TotalSegmentator: Robust Segmentation of 104 Anatomical Structures in CT Images</i>, Radiology: AI, 2023.</cite>",
     "tta": 0,
-    "mc_dropout": 0
+    "mc_dropout": 0,
+    "terminology": {
+        "1": "spleen",
+        "2": "kidney_right",
+        "3": "kidney_left",
+        "4": "gallbladder",
+        "5": "liver",
+        "6": "stomach",
+        "7": "pancreas",
+        "8": "adrenal_gland_right",
+        "9": "adrenal_gland_left",
+        "10": "lung_upper_lobe_left",
+        "11": "lung_lower_lobe_left",
+        "12": "lung_upper_lobe_right",
+        "13": "lung_middle_lobe_right",
+        "14": "lung_lower_lobe_right",
+        "15": "esophagus",
+        "16": "trachea",
+        "17": "thyroid_gland",
+        "18": "small_bowel",
+        "19": "duodenum",
+        "20": "colon",
+        "21": "urinary_bladder",
+        "22": "prostate",
+        "23": "kidney_cyst_left",
+        "24": "kidney_cyst_right",
+        "25": "sacrum",
+        "26": "vertebrae_S1",
+        "27": "vertebrae_L5",
+        "28": "vertebrae_L4",
+        "29": "vertebrae_L3",
+        "30": "vertebrae_L2",
+        "31": "vertebrae_L1",
+        "32": "vertebrae_T12",
+        "33": "vertebrae_T11",
+        "34": "vertebrae_T10",
+        "35": "vertebrae_T9",
+        "36": "vertebrae_T8",
+        "37": "vertebrae_T7",
+        "38": "vertebrae_T6",
+        "39": "vertebrae_T5",
+        "40": "vertebrae_T4",
+        "41": "vertebrae_T3",
+        "42": "vertebrae_T2",
+        "43": "vertebrae_T1",
+        "44": "vertebrae_C7",
+        "45": "vertebrae_C6",
+        "46": "vertebrae_C5",
+        "47": "vertebrae_C4",
+        "48": "vertebrae_C3",
+        "49": "vertebrae_C2",
+        "50": "vertebrae_C1",
+        "51": "heart",
+        "52": "aorta",
+        "53": "pulmonary_vein",
+        "54": "brachiocephalic_trunk",
+        "55": "subclavian_artery_right",
+        "56": "subclavian_artery_left",
+        "57": "common_carotid_artery_right",
+        "58": "common_carotid_artery_left",
+        "59": "brachiocephalic_vein_left",
+        "60": "brachiocephalic_vein_right",
+        "61": "atrial_appendage_left",
+        "62": "superior_vena_cava",
+        "63": "inferior_vena_cava",
+        "64": "portal_vein_and_splenic_vein",
+        "65": "iliac_artery_left",
+        "66": "iliac_artery_right",
+        "67": "iliac_vena_left",
+        "68": "iliac_vena_right",
+        "69": "humerus_left",
+        "70": "humerus_right",
+        "71": "scapula_left",
+        "72": "scapula_right",
+        "73": "clavicula_left",
+        "74": "clavicula_right",
+        "75": "femur_left",
+        "76": "femur_right",
+        "77": "hip_left",
+        "78": "hip_right",
+        "79": "spinal_cord",
+        "80": "gluteus_maximus_left",
+        "81": "gluteus_maximus_right",
+        "82": "gluteus_medius_left",
+        "83": "gluteus_medius_right",
+        "84": "gluteus_minimus_left",
+        "85": "gluteus_minimus_right",
+        "86": "autochthon_left",
+        "87": "autochthon_right",
+        "88": "iliopsoas_left",
+        "89": "iliopsoas_right",
+        "90": "brain",
+        "91": "skull",
+        "92": "rib_left_1",
+        "93": "rib_left_2",
+        "94": "rib_left_3",
+        "95": "rib_left_4",
+        "96": "rib_left_5",
+        "97": "rib_left_6",
+        "98": "rib_left_7",
+        "99": "rib_left_8",
+        "100": "rib_left_9",
+        "101": "rib_left_10",
+        "102": "rib_left_11",
+        "103": "rib_left_12",
+        "104": "rib_right_1",
+        "105": "rib_right_2",
+        "106": "rib_right_3",
+        "107": "rib_right_4",
+        "108": "rib_right_5",
+        "109": "rib_right_6",
+        "110": "rib_right_7",
+        "111": "rib_right_8",
+        "112": "rib_right_9",
+        "113": "rib_right_10",
+        "114": "rib_right_11",
+        "115": "rib_right_12",
+        "116": "sternum",
+        "117": "costal_cartilages"
+    }
 }