{
"display_name": "Segmentation: Body MRI/CT 6mm",
"short_description": "Description:
Lightweight KonfAI adaptation of TotalSegmentator MRI for fast body segmentation into body trunk and extremities from MRI and CT scans at 6 mm isotropic resolution.
How to cite:
T. Akinci D’Antonoli et al., TotalSegmentator MRI: Robust Sequence-Independent Segmentation of Multiple Anatomic Structures in MRI, Radiology, 2025.",
"description": "Description:
This model integrates the reduced-resolution body configuration of TotalSegmentator MRI into the KonfAI inference pipeline for efficient MRI/CT body mask generation.
Capabilities:
• Segmentation of 2 body classes: body_trunc and body_extremities
• 6 mm isotropic input for lower memory usage and fast preprocessing workflows
• Robust body mask generation for both MRI and CT downstream pipelines
Training data:
Trained on a multimodal cohort with MRI and CT scans, with labels for the body trunk and extremities
How to cite:
T. Akinci D’Antonoli et al., TotalSegmentator MRI: Robust Sequence-Independent Segmentation of Multiple Anatomic Structures in MRI, Radiology, 2025.",
"tta": 0,
"mc_dropout": 0,
"models": ["M598.pt"],
"inputs": {
"Volume": {
"display_name": "Input Volume",
"volume_type": "VOLUME",
"required": true
}
},
"outputs": {
"Segmentation": {
"display_name": "Segmentation",
"volume_type": "SEGMENTATION",
"required": true
}
},
"inputs_evaluations": {
"Image": {
"Evaluation.yml": {
"Segmentation": {
"display_name": "Output Segmentation",
"volume_type": "VOLUME",
"required": true
},
"GT_Segmentation": {
"display_name": "GT Segmentation",
"volume_type": "VOLUME",
"required": true
}
}
}
},
"terminology": {
"1": { "name": "body_trunc", "color": "#4B79EA" },
"2": { "name": "body_extremities", "color": "#A8EA4B" }
}
}