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VictorButoi
/
flexray

Image Segmentation
PyTorch
ONNX
Safetensors
medical-image-segmentation
x-ray
radiograph
anatomy
flexray
Model card Files
xet
 Community
VictorButoi commited on
Commit
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Add FleXray base model bundle

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Files changed (6) hide show
  1. README.md +47 -0
  2. checksums.json +10 -0
  3. config.yml +87 -0
  4. label_schema.json +68 -0
  5. model.safetensors +3 -0
  6. preprocessing.json +12 -0
README.md CHANGED
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+ ---
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+ license: cc-by-nc-4.0
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+ library_name: pytorch
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+ tags:
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+ - medical-image-segmentation
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+ - x-ray
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+ - flexray
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+ ---
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+
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+ # VictorButoi/flexray-base
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+
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+ This is a FleXray segmentation model bundle. Fill in the public release details
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+ before upload.
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+
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+ ## Intended Use
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+
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+ Describe the intended research use, input image requirements, output labels, and
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+ medical-use limitations. This model is not cleared for clinical diagnosis or
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+ patient-care decisions.
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+
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+ ## Training Data
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+
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+ Document every training dataset, source modality, license, preprocessing step,
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+ and inclusion or exclusion criterion.
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+
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+ ## Evaluation
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+
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+ Report evaluation datasets, metrics, confidence intervals where available, and
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+ known failure modes.
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+
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+ ## Files
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+
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+ - `model.safetensors`: exported model weights.
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+ - `config.yml`: model architecture config.
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+ - `label_schema.json`: ordered output labels.
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+ - `preprocessing.json`: public preprocessing contract.
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+ - `checksums.json`: SHA256 checksums.
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+
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+ ## Licenses
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+
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+ Code license: MIT
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+
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+ Weights license: CC-BY-NC-4.0
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+
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+ ## Citation
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+
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+ Cite FleXray and any datasets used to train this model.
checksums.json ADDED
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+ {
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+ "algorithm": "sha256",
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+ "files": {
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+ "README.md": "59f705f7ab0923400d9b89bbfb91527e61e39883ab31655e44d6be017e3a00ef",
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+ "config.yml": "ad2117f2f419aaeaa14d567cb92344293ab7533b2f5feaaf7a21b27844fdb955",
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+ "label_schema.json": "01dede3e24ea1453852f3f7d908b05e15c75e6d9e942650888926e475d7176ad",
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+ "model.safetensors": "93fe3640108dccd2b4fbe355fd55187613f0b609d1fb2c8d71957fb0f2f49ae7",
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+ "preprocessing.json": "0ac2bb660c4d1a957e8537b0f14c7b3e451f89e21994a0f538d987135381d85a"
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+ }
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+ }
config.yml ADDED
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+ model:
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+ _class: fxr.models.UNet
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+ in_channels: 1
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+ out_channels: 61
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+ filters:
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+ - 64
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+ - 128
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+ - 256
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+ - 512
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+ - 512
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+ - 720
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+ - 1024
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+ convs_per_block: 2
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+ bottleneck_convs: null
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+ skip_connections: true
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+ dropout: 0.0
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+ norm: instance
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+ residual: true
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+ norm_after_activation: true
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+ upsample_align_corners: true
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+ residual_projection: auto
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+ residual_shortcut_norm: true
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+ protocol:
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+ name: all_structures_flexray_v4
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+ model_labels:
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+ names:
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+ - background
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+ - skull
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+ - scapulae
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+ - clavicles
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+ - humeri
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+ - phalanges
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+ - metacarpals
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+ - carpals
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+ - radii
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+ - ulnae
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+ - tibiae
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+ - femurs
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+ - patellae
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+ - fibulae
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+ - metatarsals
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+ - tarsals
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+ - toes
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+ - rib_1
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+ - rib_2
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+ - rib_3
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+ - rib_4
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+ - rib_5
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+ - rib_6
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+ - rib_7
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+ - rib_8
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+ - rib_9
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+ - rib_10
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+ - rib_11
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+ - rib_12
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+ - sternum
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+ - vertebra_c1
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+ - vertebra_c2
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+ - vertebra_c3
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+ - vertebra_c4
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+ - vertebra_c5
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+ - vertebra_c6
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+ - vertebra_c7
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+ - vertebra_t1
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+ - vertebra_t2
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+ - vertebra_t3
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+ - vertebra_t4
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+ - vertebra_t5
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+ - vertebra_t6
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+ - vertebra_t7
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+ - vertebra_t8
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+ - vertebra_t9
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+ - vertebra_t10
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+ - vertebra_t11
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+ - vertebra_t12
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+ - vertebra_l1
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+ - vertebra_l2
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+ - vertebra_l3
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+ - vertebra_l4
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+ - vertebra_l5
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+ - hips
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+ - sacrum
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+ - kidneys
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+ - liver
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+ - spleen
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+ - lungs
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+ - heart
label_schema.json ADDED
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+ {
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+ "label_names": [
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+ "background",
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+ "skull",
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+ "scapulae",
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+ "clavicles",
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+ "humeri",
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+ "phalanges",
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+ "metacarpals",
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+ "carpals",
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+ "radii",
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+ "ulnae",
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+ "tibiae",
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+ "femurs",
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+ "patellae",
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+ "fibulae",
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+ "metatarsals",
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+ "tarsals",
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+ "toes",
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+ "rib_1",
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+ "rib_2",
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+ "rib_3",
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+ "rib_4",
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+ "rib_5",
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+ "rib_6",
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+ "rib_7",
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+ "rib_8",
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+ "rib_9",
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+ "rib_10",
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+ "rib_11",
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+ "rib_12",
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+ "sternum",
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+ "vertebra_c1",
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+ "vertebra_c2",
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+ "vertebra_c3",
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+ "vertebra_c4",
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+ "vertebra_c5",
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+ "vertebra_c6",
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+ "vertebra_c7",
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+ "vertebra_t1",
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+ "vertebra_t2",
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+ "vertebra_t3",
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+ "vertebra_t4",
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+ "vertebra_t5",
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+ "vertebra_t6",
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+ "vertebra_t7",
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+ "vertebra_t8",
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+ "vertebra_t9",
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+ "vertebra_t10",
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+ "vertebra_t11",
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+ "vertebra_t12",
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+ "vertebra_l1",
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+ "vertebra_l2",
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+ "vertebra_l3",
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+ "vertebra_l4",
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+ "vertebra_l5",
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+ "hips",
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+ "sacrum",
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+ "kidneys",
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+ "liver",
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+ "spleen",
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+ "lungs",
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+ "heart"
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+ ],
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+ "model_id": "VictorButoi/flexray-base",
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+ "num_labels": 61,
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+ "weights_license": "CC-BY-NC-4.0"
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+ }
model.safetensors ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:93fe3640108dccd2b4fbe355fd55187613f0b609d1fb2c8d71957fb0f2f49ae7
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+ size 286545060
preprocessing.json ADDED
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+ {
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+ "color_mode": "grayscale",
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+ "image_size": [
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+ 256,
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+ 256
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+ ],
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+ "mean": null,
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+ "pad_to_square": true,
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+ "probability_mode": "multilabel",
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+ "scale": "zero_one",
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+ "std": null
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+ }