Training in progress, epoch 1
Browse files- .gitignore +1 -0
- added_tokens.json +45 -0
- config.json +33 -0
- pytorch_model.bin +3 -0
- runs/Jun21_18-14-58_1670dbf97285/events.out.tfevents.1687371304.1670dbf97285.3048.0 +3 -0
- runs/Jun21_18-15-31_1670dbf97285/events.out.tfevents.1687371334.1670dbf97285.3048.1 +3 -0
- special_tokens_map.json +7 -0
- tokenizer.json +0 -0
- tokenizer_config.json +15 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
.gitignore
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checkpoint-*/
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added_tokens.json
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{
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"bd": 28999,
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"cbc": 29016,
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"cr": 29033,
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"ct": 29018,
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"ec": 29030,
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"ecg": 29017,
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"ekg": 29038,
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"elix": 29035,
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"gtt": 29036,
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"hs": 28997,
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"inh": 29028,
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"inj": 29023,
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"linct": 29034,
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"med": 29037,
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"mri": 29019,
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"nad": 29014,
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"npo": 29005,
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"od": 28998,
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"oint": 29026,
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"otc": 29004,
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"pess": 29029,
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"pr": 29002,
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"prn": 29006,
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"q12h": 29013,
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"q4h": 29010,
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"q6h": 29011,
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"q8h": 29012,
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"qam": 29008,
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"qid": 29001,
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"qpm": 29009,
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"rom": 29015,
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"rx": 29020,
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"sl": 29003,
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"sol": 29024,
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"sos": 28996,
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"sr": 29031,
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"stat": 29007,
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"supp": 29027,
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"susp": 29025,
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"syrp": 29022,
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"tab": 29021,
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"tds": 29000,
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"xr": 29032
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}
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config.json
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{
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"_name_or_path": "emilyalsentzer/Bio_ClinicalBERT",
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"architectures": [
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"BertForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "O",
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"1": "ABV"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"ABV": 1,
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"O": 0
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"torch_dtype": "float32",
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"transformers_version": "4.30.2",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 29039
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}
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pytorch_model.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:9c0404dfaf152bc98b259e90514400ac25eb90b4c679651a9f55abee21ca481c
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size 431089133
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runs/Jun21_18-14-58_1670dbf97285/events.out.tfevents.1687371304.1670dbf97285.3048.0
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version https://git-lfs.github.com/spec/v1
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oid sha256:0c965b014904070dbe997123d5e46f710036e466519886419616473161244221
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size 4477
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runs/Jun21_18-15-31_1670dbf97285/events.out.tfevents.1687371334.1670dbf97285.3048.1
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version https://git-lfs.github.com/spec/v1
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oid sha256:e08be86ea77e4a7e203caef0a4f293763132ab9972a49839b56bd852fecce0e9
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size 4565
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special_tokens_map.json
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{
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"cls_token": "[CLS]",
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"mask_token": "[MASK]",
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"unk_token": "[UNK]"
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}
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tokenizer.json
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tokenizer_config.json
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{
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"clean_up_tokenization_spaces": true,
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"cls_token": "[CLS]",
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"do_basic_tokenize": true,
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"do_lower_case": true,
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"mask_token": "[MASK]",
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"model_max_length": 1000000000000000019884624838656,
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"never_split": null,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"unk_token": "[UNK]"
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}
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training_args.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:f7c0e5150df1e2c0c34b0668ec98f428034ffb5d43f8b64d46d3ef1e00bb2ff6
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size 3899
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vocab.txt
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