Training in progress, epoch 1
Browse files- added_tokens.json +194 -174
- config.json +2 -2
- pytorch_model.bin +2 -2
- runs/Jul01_10-54-23_88eb04906cb8/events.out.tfevents.1688208991.88eb04906cb8.24763.0 +2 -2
- runs/Jul01_12-25-53_88eb04906cb8/events.out.tfevents.1688214357.88eb04906cb8.24763.1 +3 -0
- tokenizer.json +0 -0
- tokenizer_config.json +1 -1
- training_args.bin +1 -1
- vocab.txt +0 -0
added_tokens.json
CHANGED
|
@@ -1,176 +1,196 @@
|
|
| 1 |
{
|
| 2 |
-
"ACL":
|
| 3 |
-
"ADH":
|
| 4 |
-
"ADHD":
|
| 5 |
-
"ADR":
|
| 6 |
-
"AFR":
|
| 7 |
-
"
|
| 8 |
-
"
|
| 9 |
-
"
|
| 10 |
-
"
|
| 11 |
-
"
|
| 12 |
-
"
|
| 13 |
-
"
|
| 14 |
-
"
|
| 15 |
-
"
|
| 16 |
-
"
|
| 17 |
-
"
|
| 18 |
-
"
|
| 19 |
-
"
|
| 20 |
-
"
|
| 21 |
-
"
|
| 22 |
-
"
|
| 23 |
-
"
|
| 24 |
-
"
|
| 25 |
-
"
|
| 26 |
-
"
|
| 27 |
-
"
|
| 28 |
-
"
|
| 29 |
-
"
|
| 30 |
-
"
|
| 31 |
-
"
|
| 32 |
-
"
|
| 33 |
-
"
|
| 34 |
-
"
|
| 35 |
-
"
|
| 36 |
-
"
|
| 37 |
-
"
|
| 38 |
-
"
|
| 39 |
-
"
|
| 40 |
-
"
|
| 41 |
-
"
|
| 42 |
-
"
|
| 43 |
-
"
|
| 44 |
-
"
|
| 45 |
-
"
|
| 46 |
-
"
|
| 47 |
-
"
|
| 48 |
-
"
|
| 49 |
-
"
|
| 50 |
-
"
|
| 51 |
-
"
|
| 52 |
-
"
|
| 53 |
-
"
|
| 54 |
-
"
|
| 55 |
-
"
|
| 56 |
-
"
|
| 57 |
-
"
|
| 58 |
-
"
|
| 59 |
-
"
|
| 60 |
-
"
|
| 61 |
-
"
|
| 62 |
-
"
|
| 63 |
-
"
|
| 64 |
-
"
|
| 65 |
-
"
|
| 66 |
-
"
|
| 67 |
-
"
|
| 68 |
-
"
|
| 69 |
-
"
|
| 70 |
-
"
|
| 71 |
-
"
|
| 72 |
-
"
|
| 73 |
-
"
|
| 74 |
-
"
|
| 75 |
-
"
|
| 76 |
-
"
|
| 77 |
-
"
|
| 78 |
-
"
|
| 79 |
-
"
|
| 80 |
-
"
|
| 81 |
-
"
|
| 82 |
-
"
|
| 83 |
-
"
|
| 84 |
-
"
|
| 85 |
-
"
|
| 86 |
-
"
|
| 87 |
-
"
|
| 88 |
-
"
|
| 89 |
-
"
|
| 90 |
-
"
|
| 91 |
-
"
|
| 92 |
-
"
|
| 93 |
-
"
|
| 94 |
-
"
|
| 95 |
-
"
|
| 96 |
-
"
|
| 97 |
-
"
|
| 98 |
-
"
|
| 99 |
-
"
|
| 100 |
-
"
|
| 101 |
-
"
|
| 102 |
-
"
|
| 103 |
-
"
|
| 104 |
-
"
|
| 105 |
-
"
|
| 106 |
-
"
|
| 107 |
-
"
|
| 108 |
-
"
|
| 109 |
-
"
|
| 110 |
-
"
|
| 111 |
-
"
|
| 112 |
-
"
|
| 113 |
-
"
|
| 114 |
-
"
|
| 115 |
-
"
|
| 116 |
-
"
|
| 117 |
-
"
|
| 118 |
-
"
|
| 119 |
-
"
|
| 120 |
-
"
|
| 121 |
-
"
|
| 122 |
-
"
|
| 123 |
-
"
|
| 124 |
-
"
|
| 125 |
-
"
|
| 126 |
-
"
|
| 127 |
-
"
|
| 128 |
-
"
|
| 129 |
-
"
|
| 130 |
-
"
|
| 131 |
-
"
|
| 132 |
-
"
|
| 133 |
-
"
|
| 134 |
-
"
|
| 135 |
-
"
|
| 136 |
-
"
|
| 137 |
-
"
|
| 138 |
-
"
|
| 139 |
-
"
|
| 140 |
-
"
|
| 141 |
-
"
|
| 142 |
-
"
|
| 143 |
-
"
|
| 144 |
-
"
|
| 145 |
-
"
|
| 146 |
-
"
|
| 147 |
-
"
|
| 148 |
-
"
|
| 149 |
-
"
|
| 150 |
-
"
|
| 151 |
-
"
|
| 152 |
-
"
|
| 153 |
-
"
|
| 154 |
-
"
|
| 155 |
-
"
|
| 156 |
-
"
|
| 157 |
-
"
|
| 158 |
-
"
|
| 159 |
-
"
|
| 160 |
-
"
|
| 161 |
-
"
|
| 162 |
-
"
|
| 163 |
-
"
|
| 164 |
-
"
|
| 165 |
-
"
|
| 166 |
-
"
|
| 167 |
-
"
|
| 168 |
-
"
|
| 169 |
-
"
|
| 170 |
-
"
|
| 171 |
-
"
|
| 172 |
-
"
|
| 173 |
-
"
|
| 174 |
-
"
|
| 175 |
-
"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 176 |
}
|
|
|
|
| 1 |
{
|
| 2 |
+
"ACL": 30667,
|
| 3 |
+
"ADH": 30643,
|
| 4 |
+
"ADHD": 30524,
|
| 5 |
+
"ADR": 30544,
|
| 6 |
+
"AFR": 30662,
|
| 7 |
+
"AIDS": 30548,
|
| 8 |
+
"AKA": 30583,
|
| 9 |
+
"ANED": 30610,
|
| 10 |
+
"ARDS": 30699,
|
| 11 |
+
"ARF": 30555,
|
| 12 |
+
"ASCVD": 30523,
|
| 13 |
+
"Administer": 30646,
|
| 14 |
+
"Allow": 30593,
|
| 15 |
+
"Assess": 30590,
|
| 16 |
+
"BKA": 30656,
|
| 17 |
+
"BMP": 30540,
|
| 18 |
+
"BP": 30629,
|
| 19 |
+
"BPD": 30708,
|
| 20 |
+
"BSO": 30595,
|
| 21 |
+
"C&S": 30688,
|
| 22 |
+
"CABG": 30542,
|
| 23 |
+
"CBC": 30665,
|
| 24 |
+
"CC": 30671,
|
| 25 |
+
"CDE": 30664,
|
| 26 |
+
"COPD": 30674,
|
| 27 |
+
"CPAP": 30679,
|
| 28 |
+
"CT": 30541,
|
| 29 |
+
"CVA": 30546,
|
| 30 |
+
"Check": 30601,
|
| 31 |
+
"Child": 30658,
|
| 32 |
+
"Conduct": 30561,
|
| 33 |
+
"Confirm": 30626,
|
| 34 |
+
"Consider": 30636,
|
| 35 |
+
"D&C": 30698,
|
| 36 |
+
"D/C": 30683,
|
| 37 |
+
"DCIS": 30617,
|
| 38 |
+
"DDX": 30701,
|
| 39 |
+
"DJD": 30661,
|
| 40 |
+
"DM": 30574,
|
| 41 |
+
"DNR": 30645,
|
| 42 |
+
"DOE": 30625,
|
| 43 |
+
"DTR": 30685,
|
| 44 |
+
"DVT": 30604,
|
| 45 |
+
"Develop": 30694,
|
| 46 |
+
"Diagnose": 30687,
|
| 47 |
+
"Document": 30649,
|
| 48 |
+
"Drain": 30615,
|
| 49 |
+
"ECG": 30589,
|
| 50 |
+
"ECT": 30682,
|
| 51 |
+
"ETOH": 30681,
|
| 52 |
+
"Elevated": 30611,
|
| 53 |
+
"Evaluate": 30614,
|
| 54 |
+
"Examine": 30600,
|
| 55 |
+
"FX": 30675,
|
| 56 |
+
"GOMER": 30712,
|
| 57 |
+
"GvHD": 30632,
|
| 58 |
+
"H&H": 30616,
|
| 59 |
+
"H&P": 30672,
|
| 60 |
+
"HA": 30669,
|
| 61 |
+
"HRT": 30545,
|
| 62 |
+
"I&D": 30676,
|
| 63 |
+
"IBD": 30579,
|
| 64 |
+
"ICD": 30551,
|
| 65 |
+
"ICU": 30673,
|
| 66 |
+
"IM": 30527,
|
| 67 |
+
"IMP": 30648,
|
| 68 |
+
"IPF": 30704,
|
| 69 |
+
"ITU": 30606,
|
| 70 |
+
"IU": 30608,
|
| 71 |
+
"Include": 30618,
|
| 72 |
+
"Infant": 30653,
|
| 73 |
+
"JT": 30622,
|
| 74 |
+
"K": 30621,
|
| 75 |
+
"KCL": 30623,
|
| 76 |
+
"Keep": 30684,
|
| 77 |
+
"LBP": 30707,
|
| 78 |
+
"LCIS": 30689,
|
| 79 |
+
"LLQ": 30532,
|
| 80 |
+
"LUQ": 30630,
|
| 81 |
+
"M/H": 30578,
|
| 82 |
+
"MCL": 30670,
|
| 83 |
+
"MVP": 30562,
|
| 84 |
+
"Manage": 30709,
|
| 85 |
+
"Monitor": 30660,
|
| 86 |
+
"N/V": 30703,
|
| 87 |
+
"NBCCS": 30549,
|
| 88 |
+
"NCP": 30666,
|
| 89 |
+
"NPO": 30686,
|
| 90 |
+
"NSR": 30642,
|
| 91 |
+
"Na": 30575,
|
| 92 |
+
"Note": 30603,
|
| 93 |
+
"O&P": 30663,
|
| 94 |
+
"O.D.": 30657,
|
| 95 |
+
"O.S.": 30635,
|
| 96 |
+
"O.U.": 30639,
|
| 97 |
+
"ORIF": 30556,
|
| 98 |
+
"Obtain": 30563,
|
| 99 |
+
"P": 30522,
|
| 100 |
+
"PCL": 30526,
|
| 101 |
+
"PD": 30609,
|
| 102 |
+
"PE": 30569,
|
| 103 |
+
"PERRLA": 30559,
|
| 104 |
+
"PFT": 30586,
|
| 105 |
+
"PMI": 30633,
|
| 106 |
+
"PMS": 30602,
|
| 107 |
+
"PT": 30594,
|
| 108 |
+
"PTH": 30599,
|
| 109 |
+
"PTSD": 30584,
|
| 110 |
+
"PUD": 30573,
|
| 111 |
+
"Patient": 30531,
|
| 112 |
+
"Patient's": 30624,
|
| 113 |
+
"Perform": 30535,
|
| 114 |
+
"Plt": 30650,
|
| 115 |
+
"Prescribe": 30554,
|
| 116 |
+
"Pt": 30580,
|
| 117 |
+
"R/O": 30565,
|
| 118 |
+
"RA": 30711,
|
| 119 |
+
"RDS": 30547,
|
| 120 |
+
"REB": 30571,
|
| 121 |
+
"RLQ": 30713,
|
| 122 |
+
"ROS": 30596,
|
| 123 |
+
"RUQ": 30652,
|
| 124 |
+
"Receive": 30566,
|
| 125 |
+
"Record": 30705,
|
| 126 |
+
"Refer": 30533,
|
| 127 |
+
"SAD": 30538,
|
| 128 |
+
"SIDS": 30605,
|
| 129 |
+
"SOB": 30634,
|
| 130 |
+
"SQ": 30655,
|
| 131 |
+
"Schedule": 30700,
|
| 132 |
+
"T": 30659,
|
| 133 |
+
"T&A": 30607,
|
| 134 |
+
"TAH": 30553,
|
| 135 |
+
"THR": 30638,
|
| 136 |
+
"TKR": 30570,
|
| 137 |
+
"TMJ": 30641,
|
| 138 |
+
"TSH": 30598,
|
| 139 |
+
"Take": 30560,
|
| 140 |
+
"Transfer": 30577,
|
| 141 |
+
"Treat": 30714,
|
| 142 |
+
"UA": 30677,
|
| 143 |
+
"ULN": 30534,
|
| 144 |
+
"URI": 30680,
|
| 145 |
+
"UTI": 30536,
|
| 146 |
+
"Undergo": 30550,
|
| 147 |
+
"Use": 30587,
|
| 148 |
+
"VSS": 30620,
|
| 149 |
+
"Wt": 30715,
|
| 150 |
+
"X-R": 30631,
|
| 151 |
+
"X-ray": 30654,
|
| 152 |
+
"XR": 30678,
|
| 153 |
+
"XRT": 30525,
|
| 154 |
+
"a.c.": 30530,
|
| 155 |
+
"a/g": 30702,
|
| 156 |
+
"ad-lib": 30696,
|
| 157 |
+
"antiemetic": 30543,
|
| 158 |
+
"anuric": 30640,
|
| 159 |
+
"appendicitis": 30637,
|
| 160 |
+
"b.i.d.": 30647,
|
| 161 |
+
"bandemia": 30572,
|
| 162 |
+
"bedtime": 30619,
|
| 163 |
+
"bibasilar": 30528,
|
| 164 |
+
"bld": 30690,
|
| 165 |
+
"c/o": 30585,
|
| 166 |
+
"chem": 30628,
|
| 167 |
+
"complains": 30557,
|
| 168 |
+
"diagnose": 30591,
|
| 169 |
+
"diagnoses": 30567,
|
| 170 |
+
"dict": 30668,
|
| 171 |
+
"gtt": 30529,
|
| 172 |
+
"h.s.": 30693,
|
| 173 |
+
"h/o": 30612,
|
| 174 |
+
"hormonal": 30588,
|
| 175 |
+
"hypertension": 30597,
|
| 176 |
+
"imbalance": 30706,
|
| 177 |
+
"imbalances": 30613,
|
| 178 |
+
"implantation": 30581,
|
| 179 |
+
"lytes": 30691,
|
| 180 |
+
"p.o.": 30582,
|
| 181 |
+
"p.r.n.": 30539,
|
| 182 |
+
"patient's": 30692,
|
| 183 |
+
"p¯": 30710,
|
| 184 |
+
"q.d.": 30558,
|
| 185 |
+
"q.i.d.": 30552,
|
| 186 |
+
"q2h": 30651,
|
| 187 |
+
"q3h": 30695,
|
| 188 |
+
"qAM": 30627,
|
| 189 |
+
"qPM": 30592,
|
| 190 |
+
"qhs": 30697,
|
| 191 |
+
"qod": 30644,
|
| 192 |
+
"s/p": 30576,
|
| 193 |
+
"t.i.d.": 30568,
|
| 194 |
+
"u/a": 30537,
|
| 195 |
+
"urinary": 30564
|
| 196 |
}
|
config.json
CHANGED
|
@@ -1,5 +1,5 @@
|
|
| 1 |
{
|
| 2 |
-
"_name_or_path": "bert-base-
|
| 3 |
"architectures": [
|
| 4 |
"BertForTokenClassification"
|
| 5 |
],
|
|
@@ -30,5 +30,5 @@
|
|
| 30 |
"transformers_version": "4.30.2",
|
| 31 |
"type_vocab_size": 2,
|
| 32 |
"use_cache": true,
|
| 33 |
-
"vocab_size":
|
| 34 |
}
|
|
|
|
| 1 |
{
|
| 2 |
+
"_name_or_path": "bert-base-uncased",
|
| 3 |
"architectures": [
|
| 4 |
"BertForTokenClassification"
|
| 5 |
],
|
|
|
|
| 30 |
"transformers_version": "4.30.2",
|
| 31 |
"type_vocab_size": 2,
|
| 32 |
"use_cache": true,
|
| 33 |
+
"vocab_size": 30716
|
| 34 |
}
|
pytorch_model.bin
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3726206397c4ad80fa89ff6ccd8ed5e7077012a86405ea428d76c29595028b4c
|
| 3 |
+
size 436238061
|
runs/Jul01_10-54-23_88eb04906cb8/events.out.tfevents.1688208991.88eb04906cb8.24763.0
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:663751e4810da0ce886c732f7a9e0184504c9e41a7ec3ccc1862d5926dc96a92
|
| 3 |
+
size 18488
|
runs/Jul01_12-25-53_88eb04906cb8/events.out.tfevents.1688214357.88eb04906cb8.24763.1
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e7ab0c4dd4261d6c427b15bf96ba377bbc5e4e927b0501addf6b95e84ab7a9b4
|
| 3 |
+
size 4547
|
tokenizer.json
CHANGED
|
The diff for this file is too large to render.
See raw diff
|
|
|
tokenizer_config.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
| 1 |
{
|
| 2 |
"clean_up_tokenization_spaces": true,
|
| 3 |
"cls_token": "[CLS]",
|
| 4 |
-
"do_lower_case":
|
| 5 |
"mask_token": "[MASK]",
|
| 6 |
"model_max_length": 512,
|
| 7 |
"pad_token": "[PAD]",
|
|
|
|
| 1 |
{
|
| 2 |
"clean_up_tokenization_spaces": true,
|
| 3 |
"cls_token": "[CLS]",
|
| 4 |
+
"do_lower_case": true,
|
| 5 |
"mask_token": "[MASK]",
|
| 6 |
"model_max_length": 512,
|
| 7 |
"pad_token": "[PAD]",
|
training_args.bin
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
size 3899
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:61e3d2d9317b53a1086c769186bc6a17afb84f1e2a74985311dc0c258ca4ab16
|
| 3 |
size 3899
|
vocab.txt
CHANGED
|
The diff for this file is too large to render.
See raw diff
|
|
|