File size: 2,403 Bytes
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"schema_version": 1,
"model_name": "PoreFM-DNA prototype",
"model_version": "0.1.0",
"embedding_dim": 384,
"chemistry": "dna_r10.4.1_e8.2_400bps",
"molecule_type": "dna",
"class_labels": [
"A",
"C",
"G",
"T",
"5mC",
"5hmC",
"6mA"
],
"scorer": "residual-effects",
"artifacts": [
{
"file": "R10.4.1_prototype.pt",
"size_bytes": 485654152,
"file_sha256": "83b0fc7a56edd24280f768da367f5e267bc7435b674786184147f8da8087cd26",
"role": "prototype",
"format": "porefm_inference_bundle",
"bundle_format_version": 1,
"components": {
"model_path": {
"role": "backbone",
"member": "artifacts/model_path.pt",
"file_sha256": "c1ddd2db3fb79b30646d93832b927c6cb521f42c150329d1b91fb47e5dc597f2",
"tensor_fingerprint": {
"scheme": "porefm-tensor-content-v1",
"sha256": "32d6bf030a601ba64fb6aab033d9053f5bb6ac67a081b519309cf6b2cb489f5c"
}
},
"effect_model": {
"role": "fitted_effects",
"member": "artifacts/effect_model.pt",
"file_sha256": "0e049b6f683e68032de499edf13863e10f8898b8f8eb0ecc11a1f1b77b783dc2",
"tensor_fingerprint": {
"scheme": "porefm-tensor-content-v1",
"sha256": "ec772d7f18269b1e964415cc0a65a6f31b195d6c203f21214c8b4f50bb77edfd"
}
}
}
}
],
"tensor_fingerprint_scheme": {
"name": "porefm-tensor-content-v1",
"algorithm": "sha256",
"scope": "Stored tensors and numeric arrays, including their names, shapes and dtypes; scalar configuration and other metadata are excluded.",
"encoding": [
"Initialize SHA-256 with ASCII porefm-tensor-content-v1 followed by one zero byte.",
"Recursively traverse dictionaries sorted by (type(key).__name__, str(key)), and lists/tuples in index order. Skip leaves other than torch.Tensor and numpy.ndarray.",
"For each leaf, compact ASCII-escaped UTF-8 JSON encodes [key_path, dtype, shape, nbytes]. key_path is the list of dictionary keys and sequence indices. dtype is torch: plus str(tensor.dtype), or numpy: plus array.dtype.str.",
"Append the JSON byte length as an unsigned 8-byte big-endian integer, the JSON bytes, then C-contiguous numerical bytes in little-endian representation. Tensor/array storage padding is excluded."
]
}
}
|