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tags:
- porefm
- pytorch
- nanopore
- rna
- pretrained
---
# PoreFM-RNA
Pretrained PoreFM model for Oxford Nanopore RNA signals.
Model version: **0.1.0**. Chemistry: **RNA004**. Embedding dimension: **512**.
| File | Contents |
|---|---|
| `backbone.pt` | Backbone for embeddings and downstream tasks. |
| `pretraining.pt` | Backbone, pretraining objective heads, and EMA target encoder; optimizer and scheduler states are excluded. |
Model configuration and preprocessing are embedded in the checkpoints. Setup and usage are documented in the PoreFM code repository.
`manifest.json` records artifact identities and tensor fingerprints. `SHA256SUMS` verifies checkpoint downloads. Tensor fingerprints are independent of descriptive metadata; file hashes identify exact bytes. Documentation-only changes leave the model version unchanged.
|