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import setuptools
setuptools.setup(
name="loki", # The name of your package on PyPI
version="0.0.1", # Choose your initial release version
author="Weiqing Chen",
author_email="wec4005@med.cornell.edu",
description="The Loki platform offers 5 core functions: tissue alignment, tissue annotation, cell type decomposition, image-transcriptomics retrieval, and ST gene expression prediction",
packages=setuptools.find_packages(), # Finds the 'loki' folder automatically
classifiers=[
"Programming Language :: Python :: 3",
"License :: BSD 3-Clause License",
"Operating System :: OS Independent",
],
python_requires='>=3.9', # or the minimum version you support
install_requires=[
"anndata==0.10.9",
"matplotlib==3.9.2",
"numpy==1.25.0",
"pandas==2.2.3",
"opencv-python==4.10.0.84",
"pycpd==2.0.0",
"torch==2.3.1",
"tangram-sc==1.0.4",
"tqdm==4.66.5",
"torchvision==0.18.1",
"open_clip_torch==2.26.1",
"pillow==10.4.0",
"ipykernel==6.29.5",
],
)
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