psalm/eval/eval_ego4d_MultiCondition_savemask.py

import torch
import os
from enum import Enum
from tqdm import tqdm
import numpy as np
from detectron2.structures import BitMasks
from psalm.constants import IGNORE_INDEX, IMAGE_TOKEN_INDEX, DEFAULT_IMAGE_TOKEN, DEFAULT_IM_START_TOKEN, \
    DEFAULT_IM_END_TOKEN, DEFAULT_SEG_TOKEN, SEG_TOKEN_INDEX
from psalm.model.builder import load_pretrained_model
from psalm.utils import disable_torch_init
from psalm.mm_utils import tokenizer_image_token, get_model_name_from_path, KeywordsStoppingCriteria
import cv2
from torch.utils.data import Dataset, DataLoader

from psalm import conversation as conversation_lib
from psalm.train.train_datasets_eval import COCO_interactive_dataset
from psalm.eval.eval_davis_evaonly import Multicondition_Dataset
#from psalm.eval.eval_davis_nullmask import Multicondition_Dataset
from psalm.eval.eval_davis_nullmask import Ego_Train_Dataset

from detectron2.structures import BoxMode
from detectron2.data import MetadataCatalog, DatasetCatalog
from typing import Dict, Optional, Sequence, List
from dataclasses import dataclass, field
import torch.distributed as dist
import transformers
from pathlib import Path
from segmentation_evaluation import openseg_classes
COLOR_MAP = openseg_classes.ADE20K_150_CATEGORIES
from detectron2.data import detection_utils as utils
import pickle
import math
@dataclass
class DataCollatorForCOCODatasetV2(object):
    """Collate examples for supervised fine-tuning."""

    tokenizer: transformers.PreTrainedTokenizer

    def __call__(self, instances: Sequence[Dict]) -> Dict[str, torch.Tensor]:
        if len(instances[0]) == 0:
            return {}
        input_ids, labels = tuple([instance[key] for instance in instances]
                                  for key in ("input_ids", "labels"))
        input_ids = torch.nn.utils.rnn.pad_sequence(
            input_ids,
            batch_first=True,
            padding_value=self.tokenizer.pad_token_id)
        labels = torch.nn.utils.rnn.pad_sequence(labels,
                                                 batch_first=True,
                                                 padding_value=IGNORE_INDEX)
        input_ids = input_ids[:, :self.tokenizer.model_max_length]
        labels = labels[:, :self.tokenizer.model_max_length]
        batch = dict(
            input_ids=input_ids,
            labels=labels,
            attention_mask=input_ids.ne(self.tokenizer.pad_token_id),
        )
        if 'image' in instances[0]:
            images = [instance['image'] for instance in instances]
            if all(x is not None and x.shape == images[0].shape for x in images):
                batch['images'] = torch.stack(images)
            else:
                batch['images'] = images
        if 'vp_image' in instances[0]:
            vp_images = [instance['vp_image'] for instance in instances]
            if all(x is not None and x.shape == vp_images[0].shape for x in vp_images):
                batch['vp_images'] = torch.stack(vp_images)
            else:
                batch['vp_images'] = vp_images
        for instance in instances:
            for key in ['input_ids', 'labels', 'image']:
                del instance[key]
        batch['seg_info'] = [instance for instance in instances]

        if 'dataset_type' in instances[0]:
            batch['dataset_type'] = [instance['dataset_type'] for instance in instances]

        if 'class_name_ids' in instances[0]:
            class_name_ids = [instance['class_name_ids'] for instance in instances]
            if any(x.shape != class_name_ids[0].shape for x in class_name_ids):
                batch['class_name_ids'] = torch.nn.utils.rnn.pad_sequence(
                    class_name_ids,
                    batch_first=True,
                    padding_value=-1,
                )
            else:
                batch['class_name_ids'] = torch.stack(class_name_ids, dim=0)
        if 'token_refer_id' in instances[0]:
            token_refer_id = [instance['token_refer_id'] for instance in instances]
            batch['token_refer_id'] = token_refer_id
        if 'cls_indices' in instances[0]:
            cls_indices = [instance['cls_indices'] for instance in instances]
            if any(x.shape != cls_indices[0].shape for x in cls_indices):
                batch['cls_indices'] = torch.nn.utils.rnn.pad_sequence(
                    cls_indices,
                    batch_first=True,
                    padding_value=-1,
                )
            else:
                batch['cls_indices'] = torch.stack(cls_indices, dim=0)
        if 'random_idx' in instances[0]:
            random_idxs = [instance['random_idx'] for instance in instances]
            batch['random_idx'] = torch.stack(random_idxs, dim=0)
        if 'class_name_embedding_indices' in instances[0]:
            class_name_embedding_indices = [instance['class_name_embedding_indices'] for instance in instances]
            class_name_embedding_indices = torch.nn.utils.rnn.pad_sequence(
                class_name_embedding_indices,
                batch_first=True,
                padding_value=0)
            batch['class_name_embedding_indices'] = class_name_embedding_indices
        if 'refer_embedding_indices' in instances[0]:
            refer_embedding_indices = [instance['refer_embedding_indices'] for instance in instances]
            refer_embedding_indices = torch.nn.utils.rnn.pad_sequence(
                refer_embedding_indices,
                batch_first=True,
                padding_value=0)
            batch['refer_embedding_indices'] = refer_embedding_indices

        # print("batch:", batch.keys())

        return batch

class Summary(Enum):
    NONE = 0
    AVERAGE = 1
    SUM = 2
    COUNT = 3


class AverageMeter(object):
    """Computes and stores the average and current value"""

    def __init__(self, name, fmt=":f", summary_type=Summary.AVERAGE):
        self.name = name
        self.fmt = fmt
        self.summary_type = summary_type
        self.reset()

    def reset(self):
        self.val = 0
        self.avg = 0
        self.sum = 0
        self.count = 0

    def update(self, val, n=1):
        self.val = val
        self.sum += val * n
        self.count += n
        self.avg = self.sum / self.count

    def all_reduce(self):
        device = "cuda" if torch.cuda.is_available() else "cpu"
        if isinstance(self.sum, np.ndarray):
            total = torch.tensor(
                self.sum.tolist()
                + [
                    self.count,
                ],
                dtype=torch.float32,
                device=device,
            )
        else:
            total = torch.tensor(
                [self.sum, self.count], dtype=torch.float32, device=device
            )

        dist.all_reduce(total, dist.ReduceOp.SUM, async_op=False)
        if total.shape[0] > 2:
            self.sum, self.count = total[:-1].cpu().numpy(), total[-1].cpu().item()
        else:
            self.sum, self.count = total.tolist()
        self.avg = self.sum / (self.count + 1e-5)

    def __str__(self):
        fmtstr = "{name} {val" + self.fmt + "} ({avg" + self.fmt + "})"
        return fmtstr.format(**self.__dict__)

    def summary(self):
        fmtstr = ""
        if self.summary_type is Summary.NONE:
            fmtstr = ""
        elif self.summary_type is Summary.AVERAGE:
            fmtstr = "{name} {avg:.3f}"
        elif self.summary_type is Summary.SUM:
            fmtstr = "{name} {sum:.3f}"
        elif self.summary_type is Summary.COUNT:
            fmtstr = "{name} {count:.3f}"
        else:
            raise ValueError("invalid summary type %r" % self.summary_type)

        return fmtstr.format(**self.__dict__)

def intersectionAndUnionGPU(output, target, K, ignore_index=255):
    # 'K' classes, output and target sizes are N or N * L or N * H * W, each value in range 0 to K - 1.
    assert output.dim() in [1, 2, 3]
    assert output.shape == target.shape
    output = output.view(-1)
    target = target.view(-1)
    output[target == ignore_index] = ignore_index
    intersection = output[output == target]
    area_intersection = torch.histc(intersection, bins=K, min=0, max=K - 1)
    area_output = torch.histc(output, bins=K, min=0, max=K - 1)
    area_target = torch.histc(target, bins=K, min=0, max=K - 1)
    area_union = area_output + area_target - area_intersection
    return area_intersection, area_union, area_target

@dataclass
class DataArguments:
    data_path: str = field(default=None, metadata={"help": "Path to the training data."})
    lazy_preprocess: bool = False
    only_two_class: bool = False
    old_two_class: bool = False
    is_multimodal: bool = False
    image_folder: Optional[str] = field(default='/home/emzhang/data/segmentation/refer_seg/images/mscoco/images/train2014')
    # mask_config: Optional[str] = field(default="./llava/mask_config/maskformer2_swin_base_384_bs16_50ep.yaml")
    mask_config: Optional[str] = field(default="./psalm/mask_config/maskformer2_swin_base_384_bs16_50ep.yaml")
    image_aspect_ratio: str = 'square'
    image_grid_pinpoints: Optional[str] = field(default=None)
    region_mask_type: Optional[str] = field(default=None)
    # json_path: str = '/home/emzhang/code/LLaVA/datasets/refcoco/refcoco_train_sampled.json'
    json_path: str = '/home/emzhang/code/LLaVA/datasets/refcoco/refcoco_val.json'
    model_path: str = '/home/emzhang/code/llava_zem/checkpoints/SEG_class_refcoco_after_fixbug'
    model_map_name: str = 'psalm_video'
    version: str = 'opt-iml-1.3b'
    SEG_norm: bool = field(default=False)
    SEG_proj: bool = field(default=True)
    criterion_type: Optional[str] = field(default="concat_seg")
    matcher_type: Optional[str] = field(default="wo_class")
    llm_pos: Optional[str] = field(default="none")
    ln_2048: bool = field(default=False)
    seg_idx_back: bool = field(default=False)
    segmentation: bool = True
    eval_batch_size: int = 1
    dataloader_num_workers: int = 4
    thr: float = 0.5
    topk: int=1
    fuse_score: bool = field(default=False)
    seg_task: Optional[str] = field(default="region")
    seg_last: bool = field(default=True)
    num_chunks: int=1
    chunk_idx: int=0

def parse_outputs(outputs,gt_mask):
    res_list = []
    #print("len of outputs:", len(outputs))
    for output in outputs:
        # gt = output['gt'].cpu().numpy().astype(np.uint8)

        pred_mask = output['instances'].pred_masks
        #print("pred_mask_shape:", pred_mask.shape) # debug
        pred_mask = pred_mask.cpu().numpy()
        scores = output['instances'].scores.transpose(1,0).cpu().numpy()
        #print("scores_shape:", output['instances'].scores.shape) # debug
        gt_mask = output['gt'].cpu().numpy().astype(np.uint8)
        #print("gt_mask:", gt_mask.shape) # debug
        try:
            pred_cls = output['instances'].pred_classes.cpu().numpy()
        except:
            pred_cls = None
        assert scores.shape[0] == gt_mask.shape[0]
        for i in range(gt_mask.shape[0]):
            res = {
                'pred':pred_mask,
                'gt': gt_mask[i],
                'scores':scores[i],
                'pred_cls':pred_cls
            }
            res_list.append(res)
    return res_list

def get_center(mask,h,w):
    y_coords, x_coords = np.where(mask == 1)
    if len(y_coords) == 0 or len(x_coords) == 0:
        return 0.5, 0.5
    
    centroid_y = int(np.mean(y_coords))
    centroid_x = int(np.mean(x_coords))
    # centroid_x, centroid_y = np.median(mask.nonzero(), axis=1)[::-1]
    centroid_y = centroid_y / h
    centroid_x = centroid_x / w
    return centroid_y, centroid_x

def get_distance(x1,y1,x2,y2):
    return math.sqrt((x2 - x1)**2 + (y2 - y1)**2)

def iou(mask1,mask2):
    intersection = np.logical_and(mask1, mask2)
    union = np.logical_or(mask1, mask2)
    iou = np.sum(intersection) / np.sum(union)
    return iou

def compute_metric(le_meter,intersection_meter,union_meter,acc_iou_meter,results_list,thr=0.5,topk=3,vis=False):
    pred_list = []
    gt_list = []
    results_list = list(results_list)
    tot = 0
    cor = 0
    for results in results_list:
        gt = results['gt']
        preds = results['pred']
        scores = results['scores']
        # import ipdb;ipdb.set_trace()
        preds = preds.astype(np.uint8)
        _,idx = torch.topk(torch.tensor(scores),topk)
        idx = idx.cpu().numpy()
        topk_preds = preds[idx,:]
        max_acc_iou = -1
        max_iou = 0
        max_intersection = 0
        max_union = 0
        max_i = 0
        for i,pred_ in enumerate(topk_preds):
            h,w = pred_.shape[:2]
            pred_y, pred_x = get_center(pred_,h,w)
            gt_y, gt_x = get_center(gt,h,w)
            dist = get_distance(pred_x,pred_y,gt_x,gt_y)
            le_meter.update(dist)
            intersection, union, _ = intersectionAndUnionGPU(
                torch.tensor(pred_).int().cuda().contiguous().clone(), torch.tensor(gt).int().cuda().contiguous(), 2, ignore_index=255
            )
            intersection, union = intersection.cpu().numpy(), union.cpu().numpy()
            acc_iou = intersection / (union + 1e-5)
            acc_iou[union == 0] = 1.0  # no-object target
            fore_acc_iou = acc_iou[1]
            if fore_acc_iou > max_acc_iou:
                max_acc_iou = fore_acc_iou
                max_iou = acc_iou
                max_intersection = intersection
                max_union = union
                max_i = i
        intersection_meter.update(max_intersection)
        union_meter.update(max_union)
        acc_iou_meter.update(max_iou, n=1)
        pred_list.append(topk_preds[max_i])
        gt_list.append(gt)

        fg_iou = acc_iou[1]
        if fg_iou > 0.5:
            cor += 1
            tot += 1
        else:
            tot += 1

    return pred_list,gt_list, cor, tot

def resize_decoded_mask(decoded_mask,resized_h, resized_w):
    segm = mask.decode(decoded_mask).astype(np.uint8)
    new_mask = cv2.resize(segm,(resized_w,resized_h))
    new_mask[new_mask > 0] = 1
    new_mask = new_mask.astype(np.uint8)
    resized_mask = mask.encode(np.asfortranarray(new_mask))
    return resized_mask

def decode_mask(decoded_mask):
    segm = mask.decode(decoded_mask).astype(np.uint8)
    return segm

def split_list(lst, n):
    """Split a list into n (roughly) equal-sized chunks"""
    chunk_size = math.ceil(len(lst) / n)  # integer division
    return [lst[i:i+chunk_size] for i in range(0, len(lst), chunk_size)]


def get_chunk(lst, n, k):
    chunks = split_list(lst, n)
    return chunks[k]





def fuse_davis_mask(mask_list,fill_number_list):
    fused_mask = np.zeros_like(mask_list[0])
    for mask, fill_number in zip(mask_list,fill_number_list):
        fill_number = int(fill_number)
        fused_mask[mask == 1] = fill_number
    return fused_mask


import os
import re

def get_latest_checkpoint_path(model_path):
    # 正则表达式用于匹配 checkpoint 文件夹名称格式：checkpoint-<iter>
    checkpoint_pattern = re.compile(r"checkpoint-(\d+)")
    
    # 检查是否已经是具体的 checkpoint 路径
    if os.path.basename(model_path).startswith("checkpoint-") and checkpoint_pattern.match(os.path.basename(model_path)):
        return model_path  # 已经是具体的 checkpoint，直接返回
    
    # 如果是目录路径，查找其中的最新 checkpoint
    elif os.path.isdir(model_path):
        checkpoints = [d for d in os.listdir(model_path) if checkpoint_pattern.match(d)]
        
        if not checkpoints:
            raise ValueError("No checkpoints found in the specified directory.")
        
        # 根据迭代次数找到最新的 checkpoint
        max_checkpoint = max(checkpoints, key=lambda x: int(checkpoint_pattern.match(x).group(1)))
        model_path = os.path.join(model_path, max_checkpoint)
    
    elif not os.path.exists(model_path):
        raise FileNotFoundError(f"The specified path '{model_path}' does not exist.")
    
    return model_path


def evaluation():
    parser = transformers.HfArgumentParser(DataArguments)
    data_args = parser.parse_args_into_dataclasses()[0]
    disable_torch_init()
    model_path = os.path.expanduser(data_args.model_path)
    model_path = get_latest_checkpoint_path(model_path)     #xiugai: to adapt only input model path without sepcify the ckp path
    print('------------------------TESTING----------------- ckp:', model_path)
    model_name = get_model_name_from_path(model_path)
    print(f'current model is {model_path}')
    print('save model name:', model_name)
    # model_map_name = 'psalm' 
    model_name = 'psalm_SSL_MultiCondition'
    print('now changed the model name to:', model_name)
    tokenizer, model, image_processor, context_len = load_pretrained_model(model_path, None, model_name, model_args=data_args, mask_config=data_args.mask_config, device='cuda')
    # ckpt = torch.load(os.path.join(model_path,'pytorch_model.bin'))
    # model.load_state_dict(ckpt,strict=True)

    data_args.image_processor = image_processor
    #print('image_processor:', image_processor)

    data_args.is_multimodal = True
    conversation_lib.default_conversation = conversation_lib.conv_templates[data_args.version]

    # eval_dataset = EGO4D_Dataset(json_path=data_args.json_path, tokenizer=tokenizer, data_args=data_args)
    # eval_dataset = DAVIS_Dataset(json_path=data_args.json_path, tokenizer=tokenizer, data_args=data_args)
    #eval_dataset = Ego_Train_Dataset(json_path=data_args.json_path, tokenizer=tokenizer, data_args=data_args)
    eval_dataset = Multicondition_Dataset(json_path=data_args.json_path, tokenizer=tokenizer, data_args=data_args)
    data_collator = DataCollatorForCOCODatasetV2(tokenizer=tokenizer)

    dataloader_params = {
        "batch_size": data_args.eval_batch_size,
        "num_workers": data_args.dataloader_num_workers,
    }
    eval_dataloader = DataLoader(eval_dataset, batch_size=dataloader_params['batch_size'], collate_fn=data_collator,
                                 num_workers=dataloader_params['num_workers'])

    def load_ref_dataset():
        return RefCOCO_dataset(json_path=data_args.json_path, tokenizer=tokenizer, data_args=data_args)

    DatasetCatalog.register('refcoco_dataset', load_ref_dataset)
    MetadataCatalog.get('refcoco_dataset').set(stuff_classes=['object'],)
    gt_json_path = data_args.json_path
    save_dir = os.path.dirname(gt_json_path)
    save_dir = os.path.join(save_dir,'predictions_handal_all')

    # evaluator = my_refcoco_evaluator('refcoco_dataset', output_dir='./output/instruction_segmentation', distributed=False)
    # evaluator.reset()

    device = 'cuda' if torch.cuda.is_available() else 'cpu'
    # device = 'cpu'

    model.to(device=device,dtype=torch.float).eval()
    # inference_on_dataset(model, eval_dataloader, evaluator)
    save_list = []
    intersection_meter = AverageMeter("Intersec", ":6.3f", Summary.SUM)
    union_meter = AverageMeter("Union", ":6.3f", Summary.SUM)
    acc_iou_meter = AverageMeter("gIoU", ":6.3f", Summary.SUM)
    le_meter = AverageMeter("LE", ":6.3f", Summary.SUM)
    cor = 0
    tot = 0
    prev_image = None
    prev_mask_list = None
    prev_fill_number_list = None
    prev_video = None
    prev_transformer = None


    with torch.no_grad():
        for idx, inputs in tqdm(enumerate(eval_dataloader), total=len(eval_dataloader)):
            if len(inputs) == 0:
                print('no data load')
                continue

            inputs = {k: v.to(device) if torch.is_tensor(v) else v for k, v in inputs.items()}
            inputs['token_refer_id'] = [ids.to(device) for ids in inputs['token_refer_id']] # for withtext
            

            
            try:

                if 'instance' in data_args.model_map_name:
                    outputs = model.eval_video(
                        input_ids=inputs['input_ids'],
                        attention_mask=inputs['attention_mask'],
                        images=inputs['images'].float(),
                        vp_images=inputs['vp_images'].float(),
                        seg_info=inputs['seg_info'],
                        class_name_embedding_indices=inputs['class_name_embedding_indices'],
                        class_name_ids=inputs['class_name_ids'],
                        cls_indices=inputs['cls_indices'],
                        labels=inputs['labels']
                    )
                else:
                    #print('comes else!') # YES
                    '''
                    outputs = model.eval_video(
                        input_ids=inputs['input_ids'],
                        attention_mask=inputs['attention_mask'],
                        images=inputs['images'].float(),
                        vp_images=inputs['vp_images'].float(),
                        seg_info=inputs['seg_info'],
                        labels=inputs['labels']
                    )
                    '''
                    #print('EVAL INPUT:', 'token_refer_id:', inputs['token_refer_id'], 'refer_embedding_indices:', inputs['refer_embedding_indices']) #Yes
                    outputs = model.eval_video(
                        input_ids=inputs['input_ids'],
                        attention_mask=inputs['attention_mask'],
                        images=inputs['images'].float(),
                        vp_images=inputs['vp_images'].float(),
                        seg_info=inputs['seg_info'],
                        token_refer_id = inputs['token_refer_id'],
                        refer_embedding_indices=inputs['refer_embedding_indices'],
                        labels=inputs['labels']
                    )
                if torch.cuda.is_available():
                    torch.cuda.synchronize()
            except:
                print('something wrong when infer')
                continue
            
            output = outputs[0]
            pred_mask = output['instances'].pred_masks
            pred_mask = pred_mask.cpu().numpy()
            scores = output['instances'].scores.transpose(1, 0).cpu().numpy()
            gt_mask = output['gt'].cpu().numpy().astype(np.uint8)
            assert len(scores) == len(inputs['seg_info'][0]['instances'].vp_fill_number)
            pred_mask_list = []
            pred_score_list = []
            fill_number_list = []
            prev_idx = []
            for i in range(len(scores)):
                cur_scores = scores[i]
                cur_fill_number = inputs['seg_info'][0]['instances'].vp_fill_number[i]
                max_score, idx = torch.topk(torch.tensor(cur_scores), 10, largest=True, sorted=True)
                idx = idx.cpu().numpy()
                for i in range(10):
                    if idx[i] not in prev_idx:
                        prev_idx.append(idx[i])
                        pick_idx = idx[i]
                        pick_score = max_score[i]
                        break
                #TODO这里curpred是单个物体的mask，可以在这里看看能不能提取种类id信息
                cur_pred = pred_mask[pick_idx, :]
                pred_score_list.append(pick_score)
                pred_mask_list.append(cur_pred)
                fill_number_list.append(cur_fill_number)
            pred_mask_list = [tensor_.astype(np.uint8) for tensor_ in pred_mask_list]

            fused_pred_mask = fuse_davis_mask(pred_mask_list,fill_number_list)

            
            save_name = inputs['seg_info'][0]['file_name']
            video_name = save_name.split('/')[-5]
            print("save_name:", save_name)
            #print(save_name)
            #save_name = "psalm_original/" + save_name.split('/data_segswap/')[1] #for psalm
            #save_name = '480p/' + save_name.split('/480p/')[1]  #for davis
            save_name = "test/" + save_name.split('/test/')[1]
            save_path = os.path.join(save_dir,video_name, save_name).split('.')[0] + '.png'
            # print(save_path)
            Path(os.path.dirname(save_path)).mkdir(exist_ok=True,parents=True)
            cv2.imwrite(save_path,fused_pred_mask)
            # cv2.imwrite(save_color_path,color_image)

    



if __name__ == '__main__':
    
    evaluation()