Single_Cell_Classifier / config.json
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{
"model_type": "unified_cell_classifier",
"auto_map": {
"AutoConfig": "configuration_unified_cell.UnifiedCellClassifierConfig",
"AutoModel": "unified_cell_classifier.UnifiedCellClassifier"
},
"sub_classifier_names": [
"B_cells_classifier",
"CD4plus_T_cells_classifier",
"Myeloid_cells_classifier",
"NK_cells_classifier",
"TRAV1_2_CD8plus_T_cells_classifier",
"gd_T_cells_classfier"
],
"main_classifier_config": {
"input_dim": 3072,
"hidden_dims": [512, 256],
"output_dim": 9,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
},
"sub_classifiers_config": {
"B_cells_classifier": {
"input_dim": 3072,
"hidden_dims": [3072, 1536, 768],
"output_dim": 9,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
},
"CD4plus_T_cells_classifier": {
"input_dim": 3072,
"hidden_dims": [3072, 1536, 768],
"output_dim": 16,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
},
"Myeloid_cells_classifier": {
"input_dim": 3072,
"hidden_dims": [3072, 1536, 768],
"output_dim": 4,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
},
"NK_cells_classifier": {
"input_dim": 3072,
"hidden_dims": [3072, 1536, 768],
"output_dim": 6,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
},
"TRAV1_2_CD8plus_T_cells_classifier": {
"input_dim": 3072,
"hidden_dims": [3072, 1536, 768],
"output_dim": 12,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
},
"gd_T_cells_classfier": {
"input_dim": 3072,
"hidden_dims": [3072, 1536, 768],
"output_dim": 5,
"dropout_rate": 0.2,
"use_residual_in_hidden": true
}
}
}