tahoe-celltype-classifier / classification_report.txt
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precision recall f1-score support
B cell 0.96 0.98 0.97 5679
CD1c-positive myeloid dendritic cell 0.83 0.91 0.87 4704
CD4-positive, alpha-beta T cell 0.90 0.95 0.92 12405
CD8-positive, alpha-beta T cell 0.88 0.94 0.91 17046
T cell 0.86 0.93 0.89 586
acinar cell 0.80 0.93 0.86 270
alveolar adventitial fibroblast 0.89 0.94 0.92 3489
alveolar macrophage 0.92 0.95 0.93 41444
alveolar type 1 fibroblast cell 0.92 0.95 0.93 5749
bronchial goblet cell 0.81 0.84 0.82 339
bronchus fibroblast of lung 0.68 0.80 0.73 1313
brush cell of tracheobronchial tree 0.63 0.89 0.74 96
capillary endothelial cell 0.91 0.96 0.93 9687
classical monocyte 0.87 0.93 0.90 9747
club cell 0.87 0.90 0.89 7555
conventional dendritic cell 0.81 0.97 0.89 217
dendritic cell 0.89 0.95 0.92 354
elicited macrophage 0.77 0.85 0.81 13237
endothelial cell of lymphatic vessel 0.88 0.96 0.92 1960
epithelial cell of lower respiratory tract 0.78 0.93 0.85 1669
fibroblast 0.76 0.85 0.80 164
hematopoietic stem cell 0.75 1.00 0.86 9
ionocyte 0.93 0.97 0.95 270
lung macrophage 0.79 0.84 0.81 1248
lung pericyte 0.90 0.94 0.92 1752
mast cell 0.99 0.99 0.99 3198
mesothelial cell 0.86 0.99 0.92 339
mucus secreting cell 0.88 0.97 0.92 214
multiciliated columnar cell of tracheobronchial tree 0.97 0.98 0.98 16961
multiciliated epithelial cell 0.91 0.95 0.93 1113
myofibroblast cell 0.76 0.86 0.81 289
nasal mucosa goblet cell 0.89 0.93 0.91 10854
natural killer cell 0.93 0.97 0.95 7266
non-classical monocyte 0.89 0.91 0.90 3939
plasma cell 0.98 0.98 0.98 4967
plasmacytoid dendritic cell 0.95 0.98 0.97 553
pulmonary alveolar epithelial cell 0.70 0.75 0.73 272
pulmonary alveolar type 1 cell 0.94 0.97 0.95 4846
pulmonary alveolar type 2 cell 0.97 0.98 0.98 23507
pulmonary artery endothelial cell 0.91 0.95 0.93 2209
pulmonary neuroendocrine cell 0.92 0.94 0.93 49
respiratory basal cell 0.90 0.95 0.93 17856
respiratory tract hillock cell 0.86 0.86 0.86 835
serous secreting cell 0.85 0.93 0.89 376
smooth muscle cell 0.65 0.85 0.74 268
stromal cell 0.71 0.82 0.76 83
tracheobronchial goblet cell 0.81 0.88 0.84 178
tracheobronchial serous cell 0.88 0.90 0.89 416
tracheobronchial smooth muscle cell 0.82 0.90 0.86 2501
unknown 0.87 0.76 0.81 93497
vein endothelial cell 0.88 0.94 0.91 4793
accuracy 0.89 342368
macro avg 0.86 0.92 0.89 342368
weighted avg 0.89 0.89 0.89 342368