| { | |
| "model_type": "tahoe-cell-classifier", | |
| "architectures": [ | |
| "CellTypeClassifier" | |
| ], | |
| "base_model": "tahoebio/Tahoe-x1", | |
| "model_size": "70m", | |
| "num_labels": 51, | |
| "d_model": 512, | |
| "n_layers": 12, | |
| "n_heads": 8, | |
| "expansion_ratio": 4, | |
| "classifier_dropout": 0.1, | |
| "label2id": { | |
| "B cell": 0, | |
| "CD1c-positive myeloid dendritic cell": 1, | |
| "CD4-positive, alpha-beta T cell": 2, | |
| "CD8-positive, alpha-beta T cell": 3, | |
| "T cell": 4, | |
| "acinar cell": 5, | |
| "alveolar adventitial fibroblast": 6, | |
| "alveolar macrophage": 7, | |
| "alveolar type 1 fibroblast cell": 8, | |
| "bronchial goblet cell": 9, | |
| "bronchus fibroblast of lung": 10, | |
| "brush cell of tracheobronchial tree": 11, | |
| "capillary endothelial cell": 12, | |
| "classical monocyte": 13, | |
| "club cell": 14, | |
| "conventional dendritic cell": 15, | |
| "dendritic cell": 16, | |
| "elicited macrophage": 17, | |
| "endothelial cell of lymphatic vessel": 18, | |
| "epithelial cell of lower respiratory tract": 19, | |
| "fibroblast": 20, | |
| "hematopoietic stem cell": 21, | |
| "ionocyte": 22, | |
| "lung macrophage": 23, | |
| "lung pericyte": 24, | |
| "mast cell": 25, | |
| "mesothelial cell": 26, | |
| "mucus secreting cell": 27, | |
| "multiciliated columnar cell of tracheobronchial tree": 28, | |
| "multiciliated epithelial cell": 29, | |
| "myofibroblast cell": 30, | |
| "nasal mucosa goblet cell": 31, | |
| "natural killer cell": 32, | |
| "non-classical monocyte": 33, | |
| "plasma cell": 34, | |
| "plasmacytoid dendritic cell": 35, | |
| "pulmonary alveolar epithelial cell": 36, | |
| "pulmonary alveolar type 1 cell": 37, | |
| "pulmonary alveolar type 2 cell": 38, | |
| "pulmonary artery endothelial cell": 39, | |
| "pulmonary neuroendocrine cell": 40, | |
| "respiratory basal cell": 41, | |
| "respiratory tract hillock cell": 42, | |
| "serous secreting cell": 43, | |
| "smooth muscle cell": 44, | |
| "stromal cell": 45, | |
| "tracheobronchial goblet cell": 46, | |
| "tracheobronchial serous cell": 47, | |
| "tracheobronchial smooth muscle cell": 48, | |
| "unknown": 49, | |
| "vein endothelial cell": 50 | |
| }, | |
| "id2label": { | |
| "0": "B cell", | |
| "1": "CD1c-positive myeloid dendritic cell", | |
| "2": "CD4-positive, alpha-beta T cell", | |
| "3": "CD8-positive, alpha-beta T cell", | |
| "4": "T cell", | |
| "5": "acinar cell", | |
| "6": "alveolar adventitial fibroblast", | |
| "7": "alveolar macrophage", | |
| "8": "alveolar type 1 fibroblast cell", | |
| "9": "bronchial goblet cell", | |
| "10": "bronchus fibroblast of lung", | |
| "11": "brush cell of tracheobronchial tree", | |
| "12": "capillary endothelial cell", | |
| "13": "classical monocyte", | |
| "14": "club cell", | |
| "15": "conventional dendritic cell", | |
| "16": "dendritic cell", | |
| "17": "elicited macrophage", | |
| "18": "endothelial cell of lymphatic vessel", | |
| "19": "epithelial cell of lower respiratory tract", | |
| "20": "fibroblast", | |
| "21": "hematopoietic stem cell", | |
| "22": "ionocyte", | |
| "23": "lung macrophage", | |
| "24": "lung pericyte", | |
| "25": "mast cell", | |
| "26": "mesothelial cell", | |
| "27": "mucus secreting cell", | |
| "28": "multiciliated columnar cell of tracheobronchial tree", | |
| "29": "multiciliated epithelial cell", | |
| "30": "myofibroblast cell", | |
| "31": "nasal mucosa goblet cell", | |
| "32": "natural killer cell", | |
| "33": "non-classical monocyte", | |
| "34": "plasma cell", | |
| "35": "plasmacytoid dendritic cell", | |
| "36": "pulmonary alveolar epithelial cell", | |
| "37": "pulmonary alveolar type 1 cell", | |
| "38": "pulmonary alveolar type 2 cell", | |
| "39": "pulmonary artery endothelial cell", | |
| "40": "pulmonary neuroendocrine cell", | |
| "41": "respiratory basal cell", | |
| "42": "respiratory tract hillock cell", | |
| "43": "serous secreting cell", | |
| "44": "smooth muscle cell", | |
| "45": "stromal cell", | |
| "46": "tracheobronchial goblet cell", | |
| "47": "tracheobronchial serous cell", | |
| "48": "tracheobronchial smooth muscle cell", | |
| "49": "unknown", | |
| "50": "vein endothelial cell" | |
| }, | |
| "task": "cell_type_classification" | |
| } |