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@@ -33,3 +33,6 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.zip filter=lfs diff=lfs merge=lfs -text
 *.zst filter=lfs diff=lfs merge=lfs -text
 *tfevents* filter=lfs diff=lfs merge=lfs -text
+real_vs_generated_umap_covrun_matched_diag.h5ad filter=lfs diff=lfs merge=lfs -text
+real_vs_generated_umap_covrun_matched_diag.png filter=lfs diff=lfs merge=lfs -text
+real_vs_generated_umap_covrun_matched_diag_diagnostic_varmatch.png filter=lfs diff=lfs merge=lfs -text

real_vs_generated_umap_covrun_matched_diag.h5ad

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+size 21352376

real_vs_generated_umap_covrun_matched_diag_balance_stats.csv

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real_vs_generated_umap_covrun_matched_diag_centroid_distance.csv

@@ -0,0 +1,121 @@
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real_vs_generated_umap_covrun_matched_diag_condition_metrics.csv

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real_vs_generated_umap_covrun_matched_diag_condition_scale_stats.csv

@@ -0,0 +1,121 @@
+condition,n_real,n_generated,real_feature_std_mean,generated_feature_std_mean,generated_over_real_std_mean_ratio,real_over_generated_std_mean_ratio,median_feature_scale_needed,mean_shift_l2,mean_shift_abs_feature_mean,real_cell_l2_mean,generated_cell_l2_mean
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real_vs_generated_umap_covrun_matched_diag_control_group_stats.csv

@@ -0,0 +1,3 @@
+group,n_conditions,n_controls_used,n_controls_matched
+donor_id=CE0008678||timepoint=48hr,54,2000,77399
+donor_id=CE0010866||timepoint=48hr,66,2000,88075

real_vs_generated_umap_covrun_matched_diag_diagnostic_varmatch_summary.csv

@@ -0,0 +1,4 @@
+metric,before_mean,after_mean,delta_mean,before_median,after_median,delta_median
+umap_distance_over_real_baseline,13.86383338915692,1.2698204124395902,-12.59401297671733,13.166376756820735,1.147544404438237,-12.018832352382498
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real_vs_generated_umap_covrun_matched_diag_diagnostic_varmatch_transform_stats.csv

@@ -0,0 +1,2 @@
+mode,eps,real_std_mean,generated_std_mean_before,generated_std_mean_after,real_mean_abs_mean,generated_mean_abs_before,generated_mean_abs_after,scale_mean,scale_median,scale_min,scale_max
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real_vs_generated_umap_covrun_matched_diag_metrics_by_donor.csv

@@ -0,0 +1,3 @@
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real_vs_generated_umap_covrun_matched_diag_metrics_by_timepoint.csv

@@ -0,0 +1,2 @@
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real_vs_generated_umap_covrun_matched_diag_real_baseline_summary.csv

@@ -0,0 +1,6 @@
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real_vs_generated_umap_covrun_matched_diag_representation_audit.csv

@@ -0,0 +1,7 @@
+dataset,status,n_obs_total,n_obs_used,n_features,feature_mean_abs_mean,feature_mean_abs_median,feature_std_mean,feature_std_median,feature_std_p05,feature_std_p95,cell_mean_mean,cell_mean_std,cell_l2_mean,cell_l2_median,cell_l2_p05,cell_l2_p95,random_pair_l2_mean,random_pair_l2_median
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