Update README: add rnaglib and masif_ligand models, remove NAD_v2 workaround

README.md

@@ -13,11 +13,13 @@ The following models are available:
 * Finetuned ATOMICA-Ligand prediction models for the following ligands:
     * metal ions: Ca, Co, Cu, Fe, K, Mg, Mn, Na, Zn
     * small molecules: ADP, ATP, GTP, GDP, FAD, NAD, NAP, NDP, HEM, HEC, CIT, CLA
+* Finetuned MaSIF-ligand prediction models (5 seeds)
+* Finetuned RNAglib prediction models (5 seeds each) for the following tasks:
+    * rna_go, rna_ligand, rna_protein, rna_site
 
 ### Setup Instructions
 1. Install the huggingface cli `pip install -U "huggingface_hub[cli]"`
 2. Download the checkpoints with `hf download ada-f/ATOMICA`
-3. Known issue: `ATOMICA_checkpoints/ligand/small_molecules/NAD/NAD_v2.pt` has a [HuggingFace server-side issue](https://github.com/mims-harvard/ATOMICA/issues/8) where the uploaded and downloaded file does not match. In the interim, please use the checkpoint provided on [Google Drive](https://drive.google.com/file/d/1Dwajwx7hgOCEZYN2qwl6H8vJsnwcZSov/view?usp=sharing).
 
 ---
 license: cc-by-4.0