| { |
| "best_metric": 0.4684931506849315, |
| "best_model_checkpoint": "/mimer/NOBACKUP/groups/naiss2023-6-290/stefano/models//PROTAC-Splitter-EncoderDecoder-lr_reduce-opt25/trial-number=17-learning_rate=3.0e-05-warmup_ratio=0.040-min_lr=0.000-factor=0.920/checkpoint-5000", |
| "epoch": 0.49319392385085814, |
| "eval_steps": 2500, |
| "global_step": 5000, |
| "is_hyper_param_search": true, |
| "is_local_process_zero": true, |
| "is_world_process_zero": true, |
| "log_history": [ |
| { |
| "epoch": 0.049319392385085814, |
| "grad_norm": 0.8111265301704407, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 1.1535, |
| "step": 500 |
| }, |
| { |
| "epoch": 0.09863878477017163, |
| "grad_norm": 0.6221622228622437, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.2655, |
| "step": 1000 |
| }, |
| { |
| "epoch": 0.14795817715525744, |
| "grad_norm": 0.40338921546936035, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.1215, |
| "step": 1500 |
| }, |
| { |
| "epoch": 0.19727756954034326, |
| "grad_norm": 0.4261607527732849, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0693, |
| "step": 2000 |
| }, |
| { |
| "epoch": 0.24659696192542907, |
| "grad_norm": 0.2943068742752075, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0448, |
| "step": 2500 |
| }, |
| { |
| "epoch": 0.2959163543105149, |
| "grad_norm": 0.23645180463790894, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0315, |
| "step": 3000 |
| }, |
| { |
| "epoch": 0.3452357466956007, |
| "grad_norm": 0.21555276215076447, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0234, |
| "step": 3500 |
| }, |
| { |
| "epoch": 0.3945551390806865, |
| "grad_norm": 0.1779136061668396, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0185, |
| "step": 4000 |
| }, |
| { |
| "epoch": 0.4438745314657723, |
| "grad_norm": 0.19552886486053467, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0148, |
| "step": 4500 |
| }, |
| { |
| "epoch": 0.49319392385085814, |
| "grad_norm": 0.19583949446678162, |
| "learning_rate": 2.9820202963061836e-05, |
| "loss": 0.0125, |
| "step": 5000 |
| }, |
| { |
| "epoch": 0.49319392385085814, |
| "eval_all_ligands_equal": 0.4684931506849315, |
| "eval_e3_equal": 0.7917808219178082, |
| "eval_e3_graph_edit_distance": 9.999999999999999e+63, |
| "eval_e3_graph_edit_distance_norm": 1.0, |
| "eval_e3_has_attachment_point(s)": 0.9860362350861688, |
| "eval_e3_heavy_atoms_difference": 0.6702607158638975, |
| "eval_e3_heavy_atoms_difference_norm": 0.016053258658166824, |
| "eval_e3_tanimoto_similarity": 0.0, |
| "eval_e3_valid": 0.9860362350861688, |
| "eval_has_all_attachment_points": 0.9776403004860804, |
| "eval_has_three_substructures": 0.9986743261157756, |
| "eval_heavy_atoms_difference": 8.543172779496244, |
| "eval_heavy_atoms_difference_norm": 0.11141826794923385, |
| "eval_linker_equal": 0.6692001767565179, |
| "eval_linker_graph_edit_distance": 9.999999999999999e+63, |
| "eval_linker_graph_edit_distance_norm": 1.0, |
| "eval_linker_has_attachment_point(s)": 0.9953159522757402, |
| "eval_linker_heavy_atoms_difference": 0.6352629253203712, |
| "eval_linker_heavy_atoms_difference_norm": 0.01089709976053881, |
| "eval_linker_tanimoto_similarity": 0.0, |
| "eval_linker_valid": 0.9953159522757402, |
| "eval_loss": 0.2863834500312805, |
| "eval_num_fragments": 2.999734865223155, |
| "eval_poi_equal": 0.7314184710561202, |
| "eval_poi_graph_edit_distance": 9.999999999999999e+63, |
| "eval_poi_graph_edit_distance_norm": 1.0, |
| "eval_poi_has_attachment_point(s)": 0.9161290322580645, |
| "eval_poi_heavy_atoms_difference": 2.5583738400353515, |
| "eval_poi_heavy_atoms_difference_norm": 0.08326207706377355, |
| "eval_poi_tanimoto_similarity": 0.0, |
| "eval_poi_valid": 0.9161290322580645, |
| "eval_reassembly": 0.4752982766239505, |
| "eval_reassembly_nostereo": 0.4969509500662837, |
| "eval_runtime": 1575.0561, |
| "eval_samples_per_second": 7.184, |
| "eval_steps_per_second": 0.112, |
| "eval_tanimoto_similarity": 0.0, |
| "eval_valid": 0.9024304021210782, |
| "step": 5000 |
| } |
| ], |
| "logging_steps": 500, |
| "max_steps": 10000, |
| "num_input_tokens_seen": 0, |
| "num_train_epochs": 1, |
| "save_steps": 5000, |
| "stateful_callbacks": { |
| "TrainerControl": { |
| "args": { |
| "should_epoch_stop": false, |
| "should_evaluate": false, |
| "should_log": false, |
| "should_save": true, |
| "should_training_stop": false |
| }, |
| "attributes": {} |
| } |
| }, |
| "total_flos": 4.33139477262336e+16, |
| "train_batch_size": 128, |
| "trial_name": "trial-number=17-learning_rate=3.0e-05-warmup_ratio=0.040-min_lr=0.000-factor=0.920", |
| "trial_params": { |
| "factor": 0.92, |
| "learning_rate": 2.9820202963061836e-05, |
| "min_lr": 1.722197529042705e-09, |
| "warmup_ratio": 0.04 |
| } |
| } |
|
|