Alejandro Pirola commited on
Commit ·
b1f8e6c
0
Parent(s):
Initial commit: SAM2 finetuned checkpoint + config
Browse files- .gitattributes +8 -0
- .gitignore +11 -0
- README.md +196 -0
- config.json +67 -0
- processor_config.json +24 -0
- sam2.1_hiera_base_plus_ft_ids.pt +3 -0
- sam_checkpoint.safetensors +3 -0
.gitattributes
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# Track large model weights with LFS
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*.pt filter=lfs diff=lfs merge=lfs -text
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*.pth filter=lfs diff=lfs merge=lfs -text
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*.safetensors filter=lfs diff=lfs merge=lfs -text
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# Text files with LF normalization
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*.json text eol=lf
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README.md text eol=lf
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*.md text eol=lf
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.gitignore
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# Outputs / artifacts
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outputs/
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logs/
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*.log
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# Python cache
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__pycache__/
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*.pyc
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# Datasets (no subir datos privados)
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data/
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README.md
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# SAM2 ID Segmenter
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Lightweight wrapper and fine‑tuning scaffold around Meta's Segment Anything 2 (SAM2) adapted to segment structured regions in ID / document images (e.g. portrait, number field, security areas). The repository currently focuses on: (1) reproducible loading of a fine‑tuned SAM2 checkpoint, (2) automatic multi‑mask generation + tight cropping, and (3) configuration file driven training/inference settings.
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> Status: Inference wrapper implemented (`SamSegmentator`). End‑to‑end training loop is a planned addition. Config already anticipates training hyper‑parameters.
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---
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## Contents
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1. Motivation & Scope
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2. Intended Use & Non‑Goals
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3. Repository Structure
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4. Configuration (`config.json`)
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5. Installation
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6. Inference Usage (`SamSegmentator`)
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7. Dataset & Mask Format (planned training)
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8. Checkpoints & Auto‑Download
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9. Metrics (recommended)
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10. Limitations & Risks
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11. Roadmap
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12. License & Citation
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---
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## 1. Motivation & Scope
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Document / ID workflows often need fast class‑agnostic region extraction (for OCR, redaction, or downstream classifiers). SAM2 provides strong general mask proposals; this project wraps it to directly yield cropped image + mask pairs ordered by area and optionally padded.
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## 2. Intended Use & Non‑Goals
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Intended:
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- Pre‑segmentation of ID / document fields prior to OCR.
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- Selective anonymization / redaction pipelines (masking faces, MRZ, barcodes, etc.).
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- Rapid prototyping for custom fine‑tuning of SAM2 on a small set of document classes.
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Non‑Goals:
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- Biometric identity verification or authoritative fraud detection.
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- Legal decision making without human review.
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- Full multi‑modal extraction (text recognition is out of scope here).
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## 3. Repository Structure
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```
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model_repo/
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config.json # Central hyper‑parameter & path config
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README.md # (this file)
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checkpoints/ # Local downloaded / fine‑tuned checkpoints
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samples/
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sample_us_passport.jpg
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src/
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sam_segmentator.py # Inference wrapper (SamSegmentator)
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main.py # Placeholder entry point
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```
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Planned: `train/` scripts for fine‑tuning (not yet implemented).
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## 4. Configuration (`model_repo/config.json`)
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Key fields (example values included in the repo):
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- `model_type`: Always `sam2` here.
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- `checkpoint_path`: Path relative to project root or absolute; if omitted and `auto_download=True` the code will attempt remote download.
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- `image_size`: Target square size used during training (future). Inference wrapper accepts raw image size.
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- `num_classes`, `class_names`: For supervised training (future); not required by the current automatic mask generator, but kept for consistency.
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- `augmentation`, `loss`, `optimizer`, `lr_scheduler`: Reserved for training loop integration.
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- `paths`: Expected dataset layout for training: `data/train/images`, `data/train/masks`, etc.
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- `mixed_precision`: Will enable `torch.autocast` during training.
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Even if not all fields are consumed now, keeping them centralized avoids future breaking refactors.
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## 5. Installation
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### Prerequisites
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- Python 3.10+ (recommended)
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- CUDA GPU (optional but recommended for speed)
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### Using uv (preferred fast resolver)
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If `pyproject.toml` is present (it is), you can do:
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```
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uv sync
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```
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This creates / updates the virtual environment and installs dependencies.
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### Using pip (alternative)
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```
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python -m venv .venv
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.venv\Scripts\activate
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pip install -U pip
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pip install -e .
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```
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If SAM2 is not a published package in your environment, you may need to install it from source (instructions will depend on the upstream SAM2 repository—add here when finalized).
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## 6. Inference Usage (`SamSegmentator`)
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Minimal example using the sample passport image:
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```python
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import cv2
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from pathlib import Path
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from src.sam_segmentator import SamSegmentator
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image_path = Path("samples/sample_us_passport.jpg")
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img_bgr = cv2.imread(str(image_path)) # BGR (OpenCV)
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segmentator = SamSegmentator(
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checkpoint_path="checkpoints/sam2.1_hiera_base_plus_ft_ids.pt", # or None to auto-download if configured
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pred_iou_thresh=0.88, # forwarded to SAM2AutomaticMaskGenerator
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stability_score_thresh=0.90,
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)
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segments = segmentator.infer(img_bgr, pad_percent=0.05)
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print(f"Total segments: {len(segments)}")
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# Each segment is (crop_bgr, mask_255)
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for i, (crop, mask) in enumerate(segments[:3]):
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cv2.imwrite(f"outputs/segment_{i}_crop.png", crop)
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cv2.imwrite(f"outputs/segment_{i}_mask.png", mask)
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```
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Output: pairs of tightly cropped images and their binary masks (0 background, 255 foreground), sorted by mask area descending.
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### Parameter Notes
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- `pad_percent`: Relative padding (default 5%) added around each tight bounding box.
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- Deprecated `pad` (absolute pixels) still accepted but will warn.
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- All additional kwargs go to `SAM2AutomaticMaskGenerator` (e.g., `box_nms_thresh`, `min_mask_region_area`).
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## 7. Dataset & Mask Format (For Future Training)
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Expected layout (mirrors `paths` in config):
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```
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data/
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train/
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images/*.jpg|png
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masks/*.png # Single‑channel, integer indices (0=background)
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val/
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images/
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masks/
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```
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Class index mapping (example):
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```
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class_names = ["ID1", "ID3", "IDCOVER"]
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0 -> background
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1 -> ID1
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2 -> ID3
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3 -> IDCOVER
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```
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Masks should use nearest‑neighbor safe compression (PNG). Avoid palette mismatch; explicit integer pixel values are recommended.
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## 8. Checkpoints & Auto‑Download
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`SamSegmentator` will:
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1. Use provided `checkpoint_path` if it exists.
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2. If none is provided and `auto_download=True`, download the default checkpoint to `checkpoints/` using an environment configured URL (`SAM2_CHECKPOINT_URL`).
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3. (Optional) Validate SHA256 if `SAM2_CHECKPOINT_SHA256` is set.
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Environment variables:
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```
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SAM2_CHECKPOINT_URL=<direct_download_url>
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SAM2_CHECKPOINT_SHA256=<hex>
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SAM2_CHECKPOINT_DIR=checkpoints
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```
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## 9. Metrics (Recommended When Training Added)
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- Mean IoU (per class & macro average)
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- Dice coefficient
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- Pixel accuracy
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- Class frequency distribution (to inform potential class weighting)
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Store per‑epoch metrics as JSON for reproducibility.
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## 10. Limitations & Risks
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Technical:
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- Current version does not include a fine‑tuning script; only inference wrapper.
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- Automatic mask generator is class‑agnostic; without fine‑tuning it may over‑segment or miss tiny fields.
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Ethical / Compliance:
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- Processing ID documents may involve PII; ensure secure storage and compliant handling.
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- Not intended for biometric decisions nor identity verification pipelines without human oversight.
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## 11. Roadmap
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- [ ] Add training script (supervised fine‑tuning using `config.json`).
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- [ ] Optional class‑guided prompting (points / boxes) pipeline.
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- [ ] Export to ONNX / TorchScript.
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- [ ] CLI interface for batch folder inference.
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- [ ] Lightweight web demo (Gradio / FastAPI).
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## 12. License & Citation
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Specify a license in a top‑level `LICENSE` file (e.g., MIT or Apache‑2.0) ensuring compatibility with SAM2's original license.
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Please cite SAM / SAM2 in academic work. Example (placeholder):
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```
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@article{kirillov2023segmentanything,
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title={Segment Anything},
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author={Kirillov, Alexander and others},
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journal={arXiv preprint arXiv:2304.02643},
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year={2023}
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}
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```
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Add updated SAM2 citation once official reference is finalized.
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## Acknowledgments
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- Meta AI for releasing Segment Anything & SAM2.
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- OpenCV, PyTorch, and the broader CV community.
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---
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If you have questions or need feature prioritization, open an Issue or start a Discussion.
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config.json
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{
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"model_type": "sam2",
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"checkpoint_path": "weights/sam2_base.pth",
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"image_size": [1024, 1024],
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"num_classes": 10,
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"class_names": [
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"ID1",
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"ID3",
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"IDCOVER"
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],
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"input_channels": 3,
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"learning_rate": 1e-5,
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"weight_decay": 0.01,
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"batch_size": 2,
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"gradient_accumulation_steps": 8,
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"num_epochs": 100,
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"optimizer": "adamw",
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"lr_scheduler": {
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"type": "cosine",
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"warmup_epochs": 5,
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"min_lr": 1e-7
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},
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"loss": {
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"primary": "cross_entropy",
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"auxiliary": ["dice"],
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"dice_smooth": 1.0,
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"class_weights": null
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},
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"mixed_precision": true,
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"early_stopping": {
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"patience": 15,
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"metric": "val_loss",
|
| 33 |
+
"mode": "min"
|
| 34 |
+
},
|
| 35 |
+
"dropout_rate": 0.0,
|
| 36 |
+
"augmentation": {
|
| 37 |
+
"horizontal_flip": true,
|
| 38 |
+
"vertical_flip": false,
|
| 39 |
+
"rotation_deg": 15,
|
| 40 |
+
"random_crop": true,
|
| 41 |
+
"scale_range": [0.9, 1.1],
|
| 42 |
+
"brightness": 0.1,
|
| 43 |
+
"contrast": 0.1,
|
| 44 |
+
"color_jitter_prob": 0.3
|
| 45 |
+
},
|
| 46 |
+
"normalization": {
|
| 47 |
+
"mean": [0.485, 0.456, 0.406],
|
| 48 |
+
"std": [0.229, 0.224, 0.225]
|
| 49 |
+
},
|
| 50 |
+
"dataloader": {
|
| 51 |
+
"num_workers": 4,
|
| 52 |
+
"pin_memory": true,
|
| 53 |
+
"shuffle": true
|
| 54 |
+
},
|
| 55 |
+
"paths": {
|
| 56 |
+
"train_images": "data/train/images",
|
| 57 |
+
"train_masks": "data/train/masks",
|
| 58 |
+
"val_images": "data/val/images",
|
| 59 |
+
"val_masks": "data/val/masks",
|
| 60 |
+
"output_dir": "outputs"
|
| 61 |
+
},
|
| 62 |
+
"logging": {
|
| 63 |
+
"log_interval": 50,
|
| 64 |
+
"save_checkpoint_every": 1
|
| 65 |
+
},
|
| 66 |
+
"seed": 42
|
| 67 |
+
}
|
processor_config.json
ADDED
|
@@ -0,0 +1,24 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"preprocessing": {
|
| 3 |
+
"resize": {
|
| 4 |
+
"height": 256,
|
| 5 |
+
"width": 256
|
| 6 |
+
},
|
| 7 |
+
"normalization": {
|
| 8 |
+
"mean": [0.485, 0.456, 0.406],
|
| 9 |
+
"std": [0.229, 0.224, 0.225]
|
| 10 |
+
},
|
| 11 |
+
"augmentation": {
|
| 12 |
+
"random_flip": true,
|
| 13 |
+
"random_crop": {
|
| 14 |
+
"height": 224,
|
| 15 |
+
"width": 224
|
| 16 |
+
}
|
| 17 |
+
}
|
| 18 |
+
},
|
| 19 |
+
"tokenization": {
|
| 20 |
+
"do_lower_case": true,
|
| 21 |
+
"max_length": 512,
|
| 22 |
+
"padding": "max_length"
|
| 23 |
+
}
|
| 24 |
+
}
|
sam2.1_hiera_base_plus_ft_ids.pt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:64f76f41204b7694ea59200d85d8b742e1808532aa063118d3d043d79aa285b3
|
| 3 |
+
size 910662494
|
sam_checkpoint.safetensors
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c30cc8d0758ccf4154a7857ae971917f379a2b781a4149c88c3b2d1bc654a452
|
| 3 |
+
size 40
|