pfam_id,GO_id,GO_term,GO_level,count,GO_idx
PF00001,GO:0004930,G protein-coupled receptor activity,function,11,0
PF00002,GO:0004930,G protein-coupled receptor activity,function,11,0
PF00003,GO:0004930,G protein-coupled receptor activity,function,11,0
PF00004,GO:0016887,ATP hydrolysis activity,function,15,1
PF00005,GO:0016887,ATP hydrolysis activity,function,15,1
PF00006,GO:0005524,ATP binding,function,178,2
PF00009,GO:0003924,GTPase activity,function,10,3
PF00010,GO:0046983,protein dimerization activity,function,22,4
PF00012,GO:0140662,ATP-dependent protein folding chaperone,function,2,5
PF00013,GO:0003723,RNA binding,function,118,6
PF00014,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF00015,GO:0007165,signal transduction,process,34,8
PF00016,GO:0016984,ribulose-bisphosphate carboxylase activity,function,2,9
PF00018,GO:0005515,protein binding,function,122,10
PF00019,GO:0008083,growth factor activity,function,17,11
PF00020,GO:0005515,protein binding,function,122,10
PF00023,GO:0005515,protein binding,function,122,10
PF00025,GO:0003924,GTPase activity,function,10,3
PF00028,GO:0007156,homophilic cell adhesion via plasma membrane adhesion molecules,process,2,12
PF00031,GO:0004869,cysteine-type endopeptidase inhibitor activity,function,3,13
PF00032,GO:0009055,electron transfer activity,function,20,14
PF00033,GO:0009055,electron transfer activity,function,20,14
PF00034,GO:0009055,electron transfer activity,function,20,14
PF00036,GO:0005509,calcium ion binding,function,34,15
PF00039,GO:0005576,extracellular region,component,203,16
PF00041,GO:0005515,protein binding,function,122,10
PF00042,GO:0020037,heme binding,function,26,17
PF00044,GO:0051287,NAD binding,function,13,18
PF00046,GO:0003677,DNA binding,function,320,19
PF00048,GO:0008009,chemokine activity,function,1,20
PF00049,GO:0005179,hormone activity,function,28,21
PF00050,GO:0005515,protein binding,function,122,10
PF00056,GO:0016491,oxidoreductase activity,function,68,22
PF00057,GO:0005515,protein binding,function,122,10
PF00060,GO:0015276,ligand-gated monoatomic ion channel activity,function,2,23
PF00063,GO:0016459,myosin complex,component,4,24
PF00064,GO:0004308,exo-alpha-sialidase activity,function,2,25
PF00067,GO:0016705,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen",function,2,26
PF00068,GO:0006644,phospholipid metabolic process,process,2,27
PF00069,GO:0004672,protein kinase activity,function,6,28
PF00071,GO:0003924,GTPase activity,function,10,3
PF00072,GO:0000160,phosphorelay signal transduction system,process,16,29
PF00073,GO:0005198,structural molecule activity,function,90,30
PF00075,GO:0004523,RNA-DNA hybrid ribonuclease activity,function,5,31
PF00076,GO:0003723,RNA binding,function,118,6
PF00080,GO:0006801,superoxide metabolic process,process,3,32
PF00081,GO:0006801,superoxide metabolic process,process,3,32
PF00082,GO:0008236,serine-type peptidase activity,function,7,33
PF00083,GO:0022857,transmembrane transporter activity,function,25,34
PF00089,GO:0004252,serine-type endopeptidase activity,function,29,35
PF00091,GO:0005525,GTP binding,function,26,36
PF00093,GO:0005515,protein binding,function,122,10
PF00095,GO:0030414,peptidase inhibitor activity,function,3,37
PF00097,GO:0046872,metal ion binding,function,48,38
PF00098,GO:0003676,nucleic acid binding,function,32,39
PF00102,GO:0006470,protein dephosphorylation,process,3,40
PF00103,GO:0005179,hormone activity,function,28,21
PF00105,GO:0043565,sequence-specific DNA binding,function,17,41
PF00108,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF00110,GO:0016055,Wnt signaling pathway,process,7,43
PF00111,GO:0051536,iron-sulfur cluster binding,function,15,44
PF00112,GO:0008234,cysteine-type peptidase activity,function,9,45
PF00114,GO:0009289,pilus,component,8,46
PF00115,GO:0009060,aerobic respiration,process,1,47
PF00116,GO:0004129,cytochrome-c oxidase activity,function,3,48
PF00118,GO:0005524,ATP binding,function,178,2
PF00119,GO:0045263,"proton-transporting ATP synthase complex, coupling factor F(o)",component,4,49
PF00120,GO:0004356,glutamine synthetase activity,function,4,50
PF00121,GO:0004807,triose-phosphate isomerase activity,function,1,51
PF00123,GO:0005179,hormone activity,function,28,21
PF00124,GO:0009772,photosynthetic electron transport in photosystem II,process,1,52
PF00125,GO:0003677,DNA binding,function,320,19
PF00126,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00127,GO:0005507,copper ion binding,function,17,54
PF00128,GO:0005975,carbohydrate metabolic process,process,70,55
PF00131,GO:0046872,metal ion binding,function,48,38
PF00133,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF00136,GO:0000166,nucleotide binding,function,30,57
PF00137,GO:0033177,"proton-transporting two-sector ATPase complex, proton-transporting domain",component,1,58
PF00139,GO:0030246,carbohydrate binding,function,20,59
PF00140,GO:0016987,sigma factor activity,function,5,60
PF00141,GO:0006979,response to oxidative stress,process,3,61
PF00142,GO:0016491,oxidoreductase activity,function,68,22
PF00143,GO:0005126,cytokine receptor binding,function,2,62
PF00145,GO:0008168,methyltransferase activity,function,37,63
PF00146,GO:0016020,membrane,component,541,64
PF00148,GO:0016491,oxidoreductase activity,function,68,22
PF00149,GO:0016787,hydrolase activity,function,35,65
PF00150,GO:0071704,organic substance metabolic process,process,2,66
PF00151,GO:0016298,lipase activity,function,3,67
PF00152,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF00155,GO:0030170,pyridoxal phosphate binding,function,7,68
PF00157,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00158,GO:0008134,transcription factor binding,function,5,69
PF00159,GO:0005179,hormone activity,function,28,21
PF00160,GO:0000413,protein peptidyl-prolyl isomerization,process,1,70
PF00161,GO:0030598,rRNA N-glycosylase activity,function,1,71
PF00162,GO:0004618,phosphoglycerate kinase activity,function,1,72
PF00163,GO:0019843,rRNA binding,function,6,73
PF00164,GO:0005840,ribosome,component,86,74
PF00165,GO:0043565,sequence-specific DNA binding,function,17,41
PF00166,GO:0044183,protein folding chaperone,function,3,75
PF00167,GO:0008083,growth factor activity,function,17,11
PF00170,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00171,GO:0016491,oxidoreductase activity,function,68,22
PF00172,GO:0000981,"DNA-binding transcription factor activity, RNA polymerase II-specific",function,2,76
PF00175,GO:0016491,oxidoreductase activity,function,68,22
PF00176,GO:0140658,ATP-dependent chromatin remodeler activity,function,1,77
PF00178,GO:0043565,sequence-specific DNA binding,function,17,41
PF00181,GO:0005840,ribosome,component,86,74
PF00182,GO:0004568,chitinase activity,function,2,78
PF00183,GO:0140662,ATP-dependent protein folding chaperone,function,2,5
PF00184,GO:0005185,neurohypophyseal hormone activity,function,2,79
PF00185,GO:0016597,amino acid binding,function,1,80
PF00186,GO:0046654,tetrahydrofolate biosynthetic process,process,1,81
PF00187,GO:0008061,chitin binding,function,4,82
PF00189,GO:0006412,translation,process,91,83
PF00191,GO:0005544,calcium-dependent phospholipid binding,function,1,84
PF00193,GO:0005540,hyaluronic acid binding,function,1,85
PF00196,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00197,GO:0004866,endopeptidase inhibitor activity,function,5,87
PF00198,GO:0016746,acyltransferase activity,function,9,88
PF00199,GO:0004096,catalase activity,function,1,89
PF00201,GO:0008194,UDP-glycosyltransferase activity,function,1,90
PF00202,GO:0008483,transaminase activity,function,1,91
PF00203,GO:0005840,ribosome,component,86,74
PF00204,GO:0003918,"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity",function,4,92
PF00205,GO:0030976,thiamine pyrophosphate binding,function,3,93
PF00207,GO:0004866,endopeptidase inhibitor activity,function,5,87
PF00208,GO:0006520,amino acid metabolic process,process,8,94
PF00209,GO:0016020,membrane,component,541,64
PF00210,GO:0008199,ferric iron binding,function,3,95
PF00211,GO:0009190,cyclic nucleotide biosynthetic process,process,1,96
PF00212,GO:0005179,hormone activity,function,28,21
PF00213,GO:0046933,"proton-transporting ATP synthase activity, rotational mechanism",function,3,97
PF00214,GO:0005179,hormone activity,function,28,21
PF00215,GO:0004590,orotidine-5'-phosphate decarboxylase activity,function,1,98
PF00216,GO:0030527,structural constituent of chromatin,function,4,99
PF00217,GO:0016772,"transferase activity, transferring phosphorus-containing groups",function,7,100
PF00218,GO:0004425,indole-3-glycerol-phosphate synthase activity,function,1,101
PF00219,GO:0005576,extracellular region,component,203,16
PF00220,GO:0005185,neurohypophyseal hormone activity,function,2,79
PF00223,GO:0009579,thylakoid,component,2,102
PF00224,GO:0004743,pyruvate kinase activity,function,1,103
PF00225,GO:0003777,microtubule motor activity,function,1,104
PF00227,GO:0005839,proteasome core complex,component,1,105
PF00228,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF00229,GO:0005164,tumor necrosis factor receptor binding,function,1,106
PF00230,GO:0015267,channel activity,function,3,107
PF00231,GO:0045261,"proton-transporting ATP synthase complex, catalytic core F(1)",component,1,108
PF00232,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00233,GO:0004114,"3',5'-cyclic-nucleotide phosphodiesterase activity",function,2,110
PF00235,GO:0003779,actin binding,function,13,111
PF00236,GO:0005179,hormone activity,function,28,21
PF00237,GO:0005840,ribosome,component,86,74
PF00238,GO:0005840,ribosome,component,86,74
PF00239,GO:0000150,DNA strand exchange activity,function,4,112
PF00240,GO:0005515,protein binding,function,122,10
PF00241,GO:0003779,actin binding,function,13,111
PF00242,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF00243,GO:0005102,signaling receptor binding,function,8,114
PF00245,GO:0016791,phosphatase activity,function,8,115
PF00246,GO:0004181,metallocarboxypeptidase activity,function,2,116
PF00250,GO:0043565,sequence-specific DNA binding,function,17,41
PF00253,GO:0005840,ribosome,component,86,74
PF00254,GO:0003755,peptidyl-prolyl cis-trans isomerase activity,function,4,117
PF00255,GO:0004602,glutathione peroxidase activity,function,1,118
PF00257,GO:0009415,response to water,process,1,119
PF00258,GO:0010181,FMN binding,function,8,120
PF00260,GO:0035092,sperm DNA condensation,process,3,121
PF00262,GO:0051082,unfolded protein binding,function,8,122
PF00263,GO:0009306,protein secretion,process,11,123
PF00264,GO:0016491,oxidoreductase activity,function,68,22
PF00265,GO:0004797,thymidine kinase activity,function,3,124
PF00267,GO:0034220,monoatomic ion transmembrane transport,process,3,125
PF00268,GO:0009263,deoxyribonucleotide biosynthetic process,process,1,126
PF00269,GO:0003690,double-stranded DNA binding,function,5,127
PF00270,GO:0003676,nucleic acid binding,function,32,39
PF00272,GO:0019731,antibacterial humoral response,process,2,128
PF00273,GO:0005615,extracellular space,component,21,129
PF00274,GO:0004332,fructose-bisphosphate aldolase activity,function,1,130
PF00275,GO:0016765,"transferase activity, transferring alkyl or aryl (other than methyl) groups",function,5,131
PF00276,GO:0005840,ribosome,component,86,74
PF00277,GO:0005576,extracellular region,component,203,16
PF00278,GO:0003824,catalytic activity,function,50,132
PF00280,GO:0009611,response to wounding,process,1,133
PF00282,GO:0016830,carbon-carbon lyase activity,function,1,134
PF00283,GO:0015979,photosynthesis,process,41,135
PF00284,GO:0009523,photosystem II,component,19,136
PF00285,GO:0046912,"acyltransferase activity, acyl groups converted into alkyl on transfer",function,1,137
PF00286,GO:0019028,viral capsid,component,65,138
PF00287,GO:0005890,sodium:potassium-exchanging ATPase complex,component,1,139
PF00288,GO:0005524,ATP binding,function,178,2
PF00290,GO:0004834,tryptophan synthase activity,function,1,140
PF00292,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00295,GO:0004650,polygalacturonase activity,function,1,141
PF00296,GO:0016705,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen",function,2,26
PF00297,GO:0005840,ribosome,component,86,74
PF00298,GO:0005840,ribosome,component,86,74
PF00299,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF00301,GO:0005506,iron ion binding,function,22,142
PF00302,GO:0008811,chloramphenicol O-acetyltransferase activity,function,1,143
PF00305,GO:0016702,"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen",function,5,144
PF00306,GO:0015986,proton motive force-driven ATP synthesis,process,18,145
PF00307,GO:0005515,protein binding,function,122,10
PF00309,GO:0001216,DNA-binding transcription activator activity,function,2,146
PF00311,GO:0008964,phosphoenolpyruvate carboxylase activity,function,2,147
PF00312,GO:0005840,ribosome,component,86,74
PF00313,GO:0003676,nucleic acid binding,function,32,39
PF00317,GO:0004748,"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor",function,2,148
PF00318,GO:0005840,ribosome,component,86,74
PF00319,GO:0046983,protein dimerization activity,function,22,4
PF00320,GO:0043565,sequence-specific DNA binding,function,17,41
PF00321,GO:0006952,defense response,process,23,149
PF00322,GO:0019229,regulation of vasoconstriction,process,1,150
PF00323,GO:0006952,defense response,process,23,149
PF00324,GO:0055085,transmembrane transport,process,55,151
PF00325,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00326,GO:0008236,serine-type peptidase activity,function,7,33
PF00329,GO:0008137,NADH dehydrogenase (ubiquinone) activity,function,4,152
PF00331,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00332,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00333,GO:0005840,ribosome,component,86,74
PF00335,GO:0016020,membrane,component,541,64
PF00336,GO:0004523,RNA-DNA hybrid ribonuclease activity,function,5,31
PF00337,GO:0030246,carbohydrate binding,function,20,59
PF00340,GO:0006954,inflammatory response,process,2,153
PF00341,GO:0008083,growth factor activity,function,17,11
PF00342,GO:0004347,glucose-6-phosphate isomerase activity,function,3,154
PF00343,GO:0008184,glycogen phosphorylase activity,function,1,155
PF00344,GO:0015031,protein transport,process,20,156
PF00345,GO:0071555,cell wall organization,process,2,157
PF00346,GO:0016651,"oxidoreductase activity, acting on NAD(P)H",function,2,158
PF00347,GO:0019843,rRNA binding,function,6,73
PF00348,GO:0008299,isoprenoid biosynthetic process,process,1,159
PF00349,GO:0016773,"phosphotransferase activity, alcohol group as acceptor",function,8,160
PF00351,GO:0016714,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen",function,1,161
PF00352,GO:0006352,DNA-templated transcription initiation,process,13,162
PF00353,GO:0005509,calcium ion binding,function,34,15
PF00355,GO:0051537,"2 iron, 2 sulfur cluster binding",function,5,163
PF00356,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00358,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF00360,GO:0009584,detection of visible light,process,1,165
PF00363,GO:0005576,extracellular region,component,203,16
PF00365,GO:0003872,6-phosphofructokinase activity,function,1,166
PF00366,GO:0005840,ribosome,component,86,74
PF00367,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF00368,GO:0004420,hydroxymethylglutaryl-CoA reductase (NADPH) activity,function,1,168
PF00370,GO:0016301,kinase activity,function,13,169
PF00374,GO:0016151,nickel cation binding,function,7,170
PF00375,GO:0015293,symporter activity,function,1,171
PF00376,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00377,GO:0051260,protein homooligomerization,process,3,172
PF00380,GO:0005840,ribosome,component,86,74
PF00382,GO:0017025,TBP-class protein binding,function,1,173
PF00384,GO:0016491,oxidoreductase activity,function,68,22
PF00387,GO:0004435,phosphatidylinositol phospholipase C activity,function,2,174
PF00389,GO:0016616,"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",function,10,175
PF00390,GO:0004470,malic enzyme activity,function,1,176
PF00391,GO:0016310,phosphorylation,process,6,177
PF00392,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00393,GO:0006098,pentose-phosphate shunt,process,1,178
PF00397,GO:0005515,protein binding,function,122,10
PF00399,GO:0005199,structural constituent of cell wall,function,4,179
PF00400,GO:0005515,protein binding,function,122,10
PF00403,GO:0046872,metal ion binding,function,48,38
PF00404,GO:0000272,polysaccharide catabolic process,process,4,180
PF00407,GO:0006952,defense response,process,23,149
PF00408,GO:0071704,organic substance metabolic process,process,2,66
PF00410,GO:0005840,ribosome,component,86,74
PF00411,GO:0005840,ribosome,component,86,74
PF00413,GO:0031012,extracellular matrix,component,2,181
PF00416,GO:0005840,ribosome,component,86,74
PF00418,GO:0015631,tubulin binding,function,5,182
PF00419,GO:0009289,pilus,component,8,46
PF00421,GO:0009521,photosystem,component,1,183
PF00423,GO:0046789,host cell surface receptor binding,function,6,184
PF00424,GO:0042025,host cell nucleus,component,7,185
PF00426,GO:0019058,viral life cycle,process,14,186
PF00427,GO:0030089,phycobilisome,component,5,187
PF00430,GO:0045263,"proton-transporting ATP synthase complex, coupling factor F(o)",component,4,49
PF00432,GO:0003824,catalytic activity,function,50,132
PF00433,GO:0006468,protein phosphorylation,process,16,188
PF00434,GO:0019028,viral capsid,component,65,138
PF00435,GO:0005515,protein binding,function,122,10
PF00436,GO:0003697,single-stranded DNA binding,function,14,189
PF00438,GO:0006556,S-adenosylmethionine biosynthetic process,process,3,190
PF00439,GO:0005515,protein binding,function,122,10
PF00440,GO:0003677,DNA binding,function,320,19
PF00441,GO:0016627,"oxidoreductase activity, acting on the CH-CH group of donors",function,6,191
PF00443,GO:0016579,protein deubiquitination,process,3,192
PF00444,GO:0005840,ribosome,component,86,74
PF00445,GO:0033897,ribonuclease T2 activity,function,1,193
PF00446,GO:0007275,multicellular organism development,process,19,194
PF00447,GO:0043565,sequence-specific DNA binding,function,17,41
PF00448,GO:0006614,SRP-dependent cotranslational protein targeting to membrane,process,8,195
PF00450,GO:0004185,serine-type carboxypeptidase activity,function,3,196
PF00451,GO:0008200,ion channel inhibitor activity,function,7,197
PF00453,GO:0019843,rRNA binding,function,6,73
PF00458,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF00463,GO:0004451,isocitrate lyase activity,function,1,198
PF00465,GO:0046872,metal ion binding,function,48,38
PF00468,GO:0005840,ribosome,component,86,74
PF00469,GO:0005525,GTP binding,function,26,36
PF00471,GO:0005840,ribosome,component,86,74
PF00472,GO:0003747,translation release factor activity,function,1,199
PF00473,GO:0005179,hormone activity,function,28,21
PF00474,GO:0022857,transmembrane transporter activity,function,25,34
PF00475,GO:0004424,imidazoleglycerol-phosphate dehydratase activity,function,1,200
PF00476,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF00478,GO:0003824,catalytic activity,function,50,132
PF00479,GO:0006006,glucose metabolic process,process,2,201
PF00483,GO:0009058,biosynthetic process,process,18,202
PF00484,GO:0004089,carbonate dehydratase activity,function,1,203
PF00485,GO:0016301,kinase activity,function,13,169
PF00486,GO:0000160,phosphorelay signal transduction system,process,16,29
PF00487,GO:0006629,lipid metabolic process,process,14,204
PF00488,GO:0030983,mismatched DNA binding,function,6,205
PF00489,GO:0072540,T-helper 17 cell lineage commitment,process,1,206
PF00490,GO:0004655,porphobilinogen synthase activity,function,1,207
PF00491,GO:0046872,metal ion binding,function,48,38
PF00493,GO:0032508,DNA duplex unwinding,process,1,208
PF00494,GO:0009058,biosynthetic process,process,18,202
PF00498,GO:0005515,protein binding,function,122,10
PF00499,GO:0008137,NADH dehydrogenase (ubiquinone) activity,function,4,152
PF00500,GO:0019028,viral capsid,component,65,138
PF00502,GO:0030089,phycobilisome,component,5,187
PF00503,GO:0031683,G-protein beta/gamma-subunit complex binding,function,1,209
PF00506,GO:0005198,structural molecule activity,function,90,30
PF00507,GO:0008137,NADH dehydrogenase (ubiquinone) activity,function,4,152
PF00508,GO:0006275,regulation of DNA replication,process,7,210
PF00509,GO:0046789,host cell surface receptor binding,function,6,184
PF00510,GO:0004129,cytochrome-c oxidase activity,function,3,48
PF00511,GO:0042025,host cell nucleus,component,7,185
PF00512,GO:0000155,phosphorelay sensor kinase activity,function,10,211
PF00513,GO:0019028,viral capsid,component,65,138
PF00514,GO:0005515,protein binding,function,122,10
PF00515,GO:0005515,protein binding,function,122,10
PF00516,GO:0019031,viral envelope,component,33,212
PF00517,GO:0005198,structural molecule activity,function,90,30
PF00519,GO:0003678,DNA helicase activity,function,8,213
PF00520,GO:0005216,monoatomic ion channel activity,function,3,214
PF00521,GO:0003918,"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity",function,4,92
PF00522,GO:0042025,host cell nucleus,component,7,185
PF00523,GO:0019064,fusion of virus membrane with host plasma membrane,process,9,215
PF00524,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF00525,GO:0005212,structural constituent of eye lens,function,1,217
PF00527,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00528,GO:0055085,transmembrane transport,process,55,151
PF00529,GO:0055085,transmembrane transport,process,55,151
PF00530,GO:0016020,membrane,component,541,64
PF00531,GO:0007165,signal transduction,process,34,8
PF00534,GO:0016757,glycosyltransferase activity,function,16,218
PF00536,GO:0005515,protein binding,function,122,10
PF00537,GO:0008200,ion channel inhibitor activity,function,7,197
PF00538,GO:0006334,nucleosome assembly,process,2,219
PF00539,GO:0001070,RNA-binding transcription regulator activity,function,1,220
PF00540,GO:0005198,structural molecule activity,function,90,30
PF00541,GO:0019062,virion attachment to host cell,process,5,221
PF00542,GO:0006412,translation,process,91,83
PF00543,GO:0006808,regulation of nitrogen utilization,process,1,222
PF00545,GO:0004521,RNA endonuclease activity,function,6,223
PF00547,GO:0043419,urea catabolic process,process,2,224
PF00548,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF00549,GO:0003824,catalytic activity,function,50,132
PF00551,GO:0009058,biosynthetic process,process,18,202
PF00552,GO:0003676,nucleic acid binding,function,32,39
PF00553,GO:0030246,carbohydrate binding,function,20,59
PF00554,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00555,GO:0005102,signaling receptor binding,function,8,114
PF00556,GO:0030077,plasma membrane light-harvesting complex,component,3,226
PF00558,GO:0005261,monoatomic cation channel activity,function,1,227
PF00559,GO:0019058,viral life cycle,process,14,186
PF00560,GO:0005515,protein binding,function,122,10
PF00562,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF00564,GO:0005515,protein binding,function,122,10
PF00569,GO:0008270,zinc ion binding,function,101,229
PF00570,GO:0003676,nucleic acid binding,function,32,39
PF00572,GO:0005840,ribosome,component,86,74
PF00573,GO:0005840,ribosome,component,86,74
PF00575,GO:0003676,nucleic acid binding,function,32,39
PF00577,GO:0015473,fimbrial usher porin activity,function,1,230
PF00578,GO:0016209,antioxidant activity,function,2,231
PF00579,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF00580,GO:0005524,ATP binding,function,178,2
PF00583,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF00584,GO:0006605,protein targeting,process,3,232
PF00587,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF00588,GO:0008173,RNA methyltransferase activity,function,2,233
PF00589,GO:0015074,DNA integration,process,12,234
PF00590,GO:0008168,methyltransferase activity,function,37,63
PF00591,GO:0016757,glycosyltransferase activity,function,16,218
PF00594,GO:0005509,calcium ion binding,function,34,15
PF00595,GO:0005515,protein binding,function,122,10
PF00598,GO:0005198,structural molecule activity,function,90,30
PF00599,GO:0033644,host cell membrane,component,6,235
PF00600,GO:0003723,RNA binding,function,118,6
PF00601,GO:0039675,exit of virus from host cell nucleus through nuclear pore,process,1,236
PF00602,GO:0039694,viral RNA genome replication,process,4,237
PF00603,GO:0039694,viral RNA genome replication,process,4,237
PF00605,GO:0000976,transcription cis-regulatory region binding,function,3,238
PF00608,GO:0019062,virion attachment to host cell,process,5,221
PF00609,GO:0004143,ATP-dependent diacylglycerol kinase activity,function,1,239
PF00610,GO:0035556,intracellular signal transduction,process,8,240
PF00612,GO:0005515,protein binding,function,122,10
PF00614,GO:0003824,catalytic activity,function,50,132
PF00616,GO:0043087,regulation of GTPase activity,process,2,241
PF00617,GO:0007264,small GTPase mediated signal transduction,process,3,242
PF00619,GO:0042981,regulation of apoptotic process,process,5,243
PF00620,GO:0007165,signal transduction,process,34,8
PF00621,GO:0005085,guanyl-nucleotide exchange factor activity,function,8,244
PF00622,GO:0005515,protein binding,function,122,10
PF00623,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF00624,GO:0000128,flocculation,process,1,245
PF00629,GO:0016020,membrane,component,541,64
PF00631,GO:0007186,G protein-coupled receptor signaling pathway,process,16,246
PF00632,GO:0004842,ubiquitin-protein transferase activity,function,8,247
PF00633,GO:0003677,DNA binding,function,320,19
PF00636,GO:0004525,ribonuclease III activity,function,2,248
PF00637,GO:0016192,vesicle-mediated transport,process,22,249
PF00638,GO:0046907,intracellular transport,process,1,250
PF00639,GO:0003755,peptidyl-prolyl cis-trans isomerase activity,function,4,117
PF00642,GO:0046872,metal ion binding,function,48,38
PF00643,GO:0008270,zinc ion binding,function,101,229
PF00644,GO:0003950,NAD+ ADP-ribosyltransferase activity,function,3,251
PF00645,GO:0008270,zinc ion binding,function,101,229
PF00646,GO:0005515,protein binding,function,122,10
PF00647,GO:0006414,translational elongation,process,4,252
PF00648,GO:0004198,calcium-dependent cysteine-type endopeptidase activity,function,1,253
PF00649,GO:0005507,copper ion binding,function,17,54
PF00651,GO:0005515,protein binding,function,122,10
PF00654,GO:0005247,voltage-gated chloride channel activity,function,1,254
PF00656,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF00657,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF00658,GO:0003723,RNA binding,function,118,6
PF00659,GO:0005515,protein binding,function,122,10
PF00661,GO:0019068,virion assembly,process,8,256
PF00664,GO:0140359,ABC-type transporter activity,function,7,257
PF00665,GO:0015074,DNA integration,process,12,234
PF00667,GO:0016491,oxidoreductase activity,function,68,22
PF00668,GO:0003824,catalytic activity,function,50,132
PF00669,GO:0005198,structural molecule activity,function,90,30
PF00672,GO:0007165,signal transduction,process,34,8
PF00676,GO:0016624,"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor",function,1,258
PF00680,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF00681,GO:0005856,cytoskeleton,component,6,260
PF00682,GO:0003824,catalytic activity,function,50,132
PF00684,GO:0031072,heat shock protein binding,function,1,261
PF00685,GO:0008146,sulfotransferase activity,function,2,262
PF00686,GO:2001070,starch binding,function,4,263
PF00693,GO:0006230,TMP biosynthetic process,process,1,264
PF00695,GO:0016032,viral process,process,29,265
PF00697,GO:0004640,phosphoribosylanthranilate isomerase activity,function,1,266
PF00699,GO:0035550,urease complex,component,1,267
PF00701,GO:0016829,lyase activity,function,20,268
PF00703,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00704,GO:0005975,carbohydrate metabolic process,process,70,55
PF00705,GO:0006275,regulation of DNA replication,process,7,210
PF00707,GO:0006413,translational initiation,process,9,269
PF00709,GO:0004019,adenylosuccinate synthase activity,function,1,270
PF00711,GO:0006952,defense response,process,23,149
PF00712,GO:0009360,DNA polymerase III complex,component,5,271
PF00713,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF00714,GO:0005133,type II interferon receptor binding,function,1,272
PF00715,GO:0005134,interleukin-2 receptor binding,function,1,273
PF00716,GO:0004252,serine-type endopeptidase activity,function,29,35
PF00718,GO:0019028,viral capsid,component,65,138
PF00719,GO:0006796,phosphate-containing compound metabolic process,process,1,274
PF00720,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF00721,GO:0019028,viral capsid,component,65,138
PF00722,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00724,GO:0010181,FMN binding,function,8,120
PF00725,GO:0006631,fatty acid metabolic process,process,5,275
PF00727,GO:0005136,interleukin-4 receptor binding,function,1,276
PF00728,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00729,GO:0019028,viral capsid,component,65,138
PF00730,GO:0006284,base-excision repair,process,5,277
PF00731,GO:0006189,'de novo' IMP biosynthetic process,process,1,278
PF00732,GO:0016614,"oxidoreductase activity, acting on CH-OH group of donors",function,3,279
PF00733,GO:0004066,asparagine synthase (glutamine-hydrolyzing) activity,function,1,280
PF00734,GO:0030248,cellulose binding,function,2,281
PF00735,GO:0005525,GTP binding,function,26,36
PF00736,GO:0006414,translational elongation,process,4,252
PF00737,GO:0042301,phosphate ion binding,function,1,282
PF00738,GO:0005198,structural molecule activity,function,90,30
PF00739,GO:0019079,viral genome replication,process,13,283
PF00740,GO:0019028,viral capsid,component,65,138
PF00741,GO:0012506,vesicle membrane,component,3,284
PF00742,GO:0006520,amino acid metabolic process,process,8,94
PF00743,GO:0004499,"N,N-dimethylaniline monooxygenase activity",function,1,285
PF00745,GO:0008883,glutamyl-tRNA reductase activity,function,2,286
PF00747,GO:0042025,host cell nucleus,component,7,185
PF00749,GO:0043039,tRNA aminoacylation,process,3,287
PF00751,GO:0043565,sequence-specific DNA binding,function,17,41
PF00752,GO:0004518,nuclease activity,function,9,288
PF00758,GO:0005179,hormone activity,function,28,21
PF00759,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00761,GO:0019028,viral capsid,component,65,138
PF00762,GO:0006783,heme biosynthetic process,process,1,289
PF00763,GO:0004488,methylenetetrahydrofolate dehydrogenase (NADP+) activity,function,2,290
PF00765,GO:0016740,transferase activity,function,18,291
PF00767,GO:0019028,viral capsid,component,65,138
PF00768,GO:0009002,serine-type D-Ala-D-Ala carboxypeptidase activity,function,2,292
PF00770,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF00771,GO:0009306,protein secretion,process,11,123
PF00772,GO:0003678,DNA helicase activity,function,8,213
PF00773,GO:0004540,RNA nuclease activity,function,7,293
PF00775,GO:0008199,ferric iron binding,function,3,95
PF00777,GO:0008373,sialyltransferase activity,function,1,294
PF00779,GO:0035556,intracellular signal transduction,process,8,240
PF00781,GO:0016301,kinase activity,function,13,169
PF00782,GO:0008138,protein tyrosine/serine/threonine phosphatase activity,function,1,295
PF00784,GO:0005856,cytoskeleton,component,6,260
PF00787,GO:0035091,phosphatidylinositol binding,function,3,296
PF00788,GO:0007165,signal transduction,process,34,8
PF00789,GO:0005515,protein binding,function,122,10
PF00790,GO:0035091,phosphatidylinositol binding,function,3,296
PF00793,GO:0009058,biosynthetic process,process,18,202
PF00795,GO:0006807,nitrogen compound metabolic process,process,10,297
PF00796,GO:0009522,photosystem I,component,10,298
PF00797,GO:0016407,acetyltransferase activity,function,3,299
PF00798,GO:0019031,viral envelope,component,33,212
PF00799,GO:0006260,DNA replication,process,57,300
PF00800,GO:0009094,L-phenylalanine biosynthetic process,process,1,301
PF00802,GO:0055036,virion membrane,component,7,302
PF00803,GO:0046740,"transport of virus in host, cell to cell",process,6,303
PF00804,GO:0016020,membrane,component,541,64
PF00806,GO:0003723,RNA binding,function,118,6
PF00809,GO:0042558,pteridine-containing compound metabolic process,process,1,304
PF00810,GO:0006621,protein retention in ER lumen,process,1,305
PF00811,GO:0007160,cell-matrix adhesion,process,2,306
PF00812,GO:0016020,membrane,component,541,64
PF00813,GO:0009306,protein secretion,process,11,123
PF00815,GO:0016616,"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",function,10,175
PF00816,GO:0030527,structural constituent of chromatin,function,4,99
PF00817,GO:0006281,DNA repair,process,37,307
PF00818,GO:0009279,cell outer membrane,component,13,308
PF00819,GO:0044564,envenomation resulting in occlusion of the pore of voltage-gated potassium channel in another organism,process,1,309
PF00820,GO:0009279,cell outer membrane,component,13,308
PF00821,GO:0004611,phosphoenolpyruvate carboxykinase activity,function,2,310
PF00822,GO:0016020,membrane,component,541,64
PF00825,GO:0004526,ribonuclease P activity,function,1,311
PF00827,GO:0005840,ribosome,component,86,74
PF00829,GO:0005840,ribosome,component,86,74
PF00830,GO:0003735,structural constituent of ribosome,function,97,312
PF00831,GO:0005840,ribosome,component,86,74
PF00832,GO:0005840,ribosome,component,86,74
PF00833,GO:0005840,ribosome,component,86,74
PF00834,GO:0016857,"racemase and epimerase activity, acting on carbohydrates and derivatives",function,2,313
PF00836,GO:0031110,regulation of microtubule polymerization or depolymerization,process,1,314
PF00837,GO:0004800,thyroxine 5'-deiodinase activity,function,1,315
PF00839,GO:0016020,membrane,component,541,64
PF00840,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00841,GO:0007286,spermatid development,process,1,316
PF00844,GO:0019028,viral capsid,component,65,138
PF00845,GO:0033644,host cell membrane,component,6,235
PF00846,GO:0019013,viral nucleocapsid,component,17,317
PF00847,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00848,GO:0044237,cellular metabolic process,process,3,318
PF00849,GO:0009451,RNA modification,process,5,319
PF00851,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF00852,GO:0008417,fucosyltransferase activity,function,2,320
PF00853,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00854,GO:0022857,transmembrane transporter activity,function,25,34
PF00856,GO:0005515,protein binding,function,122,10
PF00858,GO:0005272,sodium channel activity,function,1,321
PF00859,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF00860,GO:0022857,transmembrane transporter activity,function,25,34
PF00861,GO:0005840,ribosome,component,86,74
PF00862,GO:0005985,sucrose metabolic process,process,1,322
PF00863,GO:0008234,cysteine-type peptidase activity,function,9,45
PF00865,GO:0001503,ossification,process,4,323
PF00866,GO:0006725,cellular aromatic compound metabolic process,process,6,324
PF00867,GO:0004518,nuclease activity,function,9,288
PF00868,GO:0018149,peptide cross-linking,process,2,325
PF00869,GO:0046983,protein dimerization activity,function,22,4
PF00870,GO:0000976,transcription cis-regulatory region binding,function,3,238
PF00871,GO:0016774,"phosphotransferase activity, carboxyl group as acceptor",function,1,326
PF00872,GO:0004803,transposase activity,function,10,327
PF00873,GO:0022857,transmembrane transporter activity,function,25,34
PF00874,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00878,GO:0007041,lysosomal transport,process,1,328
PF00879,GO:0006952,defense response,process,23,149
PF00883,GO:0070006,metalloaminopeptidase activity,function,3,329
PF00885,GO:0009349,riboflavin synthase complex,component,1,330
PF00886,GO:0005840,ribosome,component,86,74
PF00887,GO:0000062,fatty-acyl-CoA binding,function,2,331
PF00888,GO:0031625,ubiquitin protein ligase binding,function,1,332
PF00889,GO:0006414,translational elongation,process,4,252
PF00891,GO:0008171,O-methyltransferase activity,function,2,333
PF00892,GO:0016020,membrane,component,541,64
PF00893,GO:0022857,transmembrane transporter activity,function,25,34
PF00894,GO:0019028,viral capsid,component,65,138
PF00895,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF00897,GO:0019028,viral capsid,component,65,138
PF00898,GO:0005198,structural molecule activity,function,90,30
PF00901,GO:0019028,viral capsid,component,65,138
PF00902,GO:0016020,membrane,component,541,64
PF00904,GO:0031424,keratinization,process,1,335
PF00905,GO:0008658,penicillin binding,function,2,336
PF00906,GO:0005198,structural molecule activity,function,90,30
PF00907,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF00908,GO:0008830,"dTDP-4-dehydrorhamnose 3,5-epimerase activity",function,1,338
PF00909,GO:0072488,ammonium transmembrane transport,process,1,339
PF00910,GO:0003724,RNA helicase activity,function,4,340
PF00913,GO:0042783,evasion of host immune response,process,1,341
PF00916,GO:0016020,membrane,component,541,64
PF00917,GO:0005515,protein binding,function,122,10
PF00918,GO:0005179,hormone activity,function,28,21
PF00919,GO:0035596,methylthiotransferase activity,function,1,342
PF00920,GO:0016836,hydro-lyase activity,function,5,343
PF00921,GO:0016020,membrane,component,541,64
PF00923,GO:0005975,carbohydrate metabolic process,process,70,55
PF00924,GO:0055085,transmembrane transport,process,55,151
PF00926,GO:0008686,"3,4-dihydroxy-2-butanone-4-phosphate synthase activity",function,1,344
PF00927,GO:0018149,peptide cross-linking,process,2,325
PF00930,GO:0006508,proteolysis,process,84,345
PF00931,GO:0043531,ADP binding,function,1,346
PF00933,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF00935,GO:0005840,ribosome,component,86,74
PF00936,GO:0031469,bacterial microcompartment,component,2,347
PF00937,GO:0019013,viral nucleocapsid,component,17,317
PF00939,GO:0022857,transmembrane transporter activity,function,25,34
PF00941,GO:0016491,oxidoreductase activity,function,68,22
PF00942,GO:0030248,cellulose binding,function,2,281
PF00943,GO:0019028,viral capsid,component,65,138
PF00944,GO:0004252,serine-type endopeptidase activity,function,29,35
PF00946,GO:0006370,7-methylguanosine mRNA capping,process,3,348
PF00947,GO:0008233,peptidase activity,function,18,349
PF00949,GO:0003724,RNA helicase activity,function,4,340
PF00950,GO:0043190,ATP-binding cassette (ABC) transporter complex,component,4,350
PF00951,GO:0019031,viral envelope,component,33,212
PF00952,GO:0019013,viral nucleocapsid,component,17,317
PF00953,GO:0016780,"phosphotransferase activity, for other substituted phosphate groups",function,2,351
PF00954,GO:0048544,recognition of pollen,process,1,352
PF00955,GO:0006820,monoatomic anion transport,process,2,353
PF00956,GO:0006334,nucleosome assembly,process,2,219
PF00958,GO:0006177,GMP biosynthetic process,process,1,354
PF00959,GO:0016998,cell wall macromolecule catabolic process,process,3,355
PF00960,GO:0006952,defense response,process,23,149
PF00961,GO:0004519,endonuclease activity,function,25,356
PF00962,GO:0019239,deaminase activity,function,1,357
PF00963,GO:0000272,polysaccharide catabolic process,process,4,180
PF00964,GO:0005576,extracellular region,component,203,16
PF00965,GO:0008191,metalloendopeptidase inhibitor activity,function,3,358
PF00967,GO:0050832,defense response to fungus,process,5,359
PF00969,GO:0042613,MHC class II protein complex,component,2,360
PF00971,GO:0019031,viral envelope,component,33,212
PF00972,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF00973,GO:0019013,viral nucleocapsid,component,17,317
PF00974,GO:0019031,viral envelope,component,33,212
PF00975,GO:0009058,biosynthetic process,process,18,202
PF00977,GO:0000105,histidine biosynthetic process,process,6,361
PF00978,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF00979,GO:0019058,viral life cycle,process,14,186
PF00980,GO:0019028,viral capsid,component,65,138
PF00981,GO:0003723,RNA binding,function,118,6
PF00982,GO:0005992,trehalose biosynthetic process,process,2,362
PF00983,GO:0019028,viral capsid,component,65,138
PF00984,GO:0016616,"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",function,10,175
PF00985,GO:0007155,cell adhesion,process,28,363
PF00986,GO:0003918,"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity",function,4,92
PF00989,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF00992,GO:0005861,troponin complex,component,1,364
PF00993,GO:0042613,MHC class II protein complex,component,2,360
PF00995,GO:0016192,vesicle-mediated transport,process,22,249
PF00996,GO:0005092,GDP-dissociation inhibitor activity,function,1,365
PF00997,GO:0005576,extracellular region,component,203,16
PF00998,GO:0039694,viral RNA genome replication,process,4,237
PF00999,GO:0015297,antiporter activity,function,3,366
PF01000,GO:0046983,protein dimerization activity,function,22,4
PF01001,GO:0017111,ribonucleoside triphosphate phosphatase activity,function,10,367
PF01002,GO:0044423,virion component,component,16,368
PF01003,GO:0019028,viral capsid,component,65,138
PF01004,GO:0019058,viral life cycle,process,14,186
PF01005,GO:0003725,double-stranded RNA binding,function,3,369
PF01006,GO:0044423,virion component,component,16,368
PF01008,GO:0044237,cellular metabolic process,process,3,318
PF01015,GO:0005840,ribosome,component,86,74
PF01016,GO:0005840,ribosome,component,86,74
PF01017,GO:0007165,signal transduction,process,34,8
PF01020,GO:0005840,ribosome,component,86,74
PF01021,GO:0005737,cytoplasm,component,103,370
PF01022,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01024,GO:0140911,pore-forming activity,function,2,371
PF01025,GO:0000774,adenyl-nucleotide exchange factor activity,function,2,372
PF01026,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF01028,GO:0003917,"DNA topoisomerase type I (single strand cut, ATP-independent) activity",function,3,373
PF01029,GO:0003723,RNA binding,function,118,6
PF01032,GO:0022857,transmembrane transporter activity,function,25,34
PF01035,GO:0006281,DNA repair,process,37,307
PF01036,GO:0016020,membrane,component,541,64
PF01040,GO:0016765,"transferase activity, transferring alkyl or aryl (other than methyl) groups",function,5,131
PF01043,GO:0017038,protein import,process,3,374
PF01044,GO:0051015,actin filament binding,function,4,375
PF01047,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01048,GO:0009116,nucleoside metabolic process,process,1,376
PF01049,GO:0007156,homophilic cell adhesion via plasma membrane adhesion molecules,process,2,12
PF01050,GO:0005976,polysaccharide metabolic process,process,1,377
PF01051,GO:0006270,DNA replication initiation,process,5,378
PF01053,GO:0019346,transsulfuration,process,1,379
PF01055,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF01056,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01057,GO:0019079,viral genome replication,process,13,283
PF01058,GO:0051536,iron-sulfur cluster binding,function,15,44
PF01060,GO:0009986,cell surface,component,3,380
PF01061,GO:0140359,ABC-type transporter activity,function,7,257
PF01062,GO:0005254,chloride channel activity,function,1,381
PF01063,GO:0003824,catalytic activity,function,50,132
PF01064,GO:0004675,transmembrane receptor protein serine/threonine kinase activity,function,2,382
PF01065,GO:0019028,viral capsid,component,65,138
PF01066,GO:0016780,"phosphotransferase activity, for other substituted phosphate groups",function,2,351
PF01068,GO:0003910,DNA ligase (ATP) activity,function,4,383
PF01070,GO:0016491,oxidoreductase activity,function,68,22
PF01073,GO:0003854,3-beta-hydroxy-delta5-steroid dehydrogenase activity,function,1,384
PF01074,GO:0004559,alpha-mannosidase activity,function,3,385
PF01075,GO:0016757,glycosyltransferase activity,function,16,218
PF01076,GO:0006310,DNA recombination,process,25,386
PF01077,GO:0051536,iron-sulfur cluster binding,function,15,44
PF01078,GO:0005524,ATP binding,function,178,2
PF01079,GO:0016540,protein autoprocessing,process,2,387
PF01080,GO:0016485,protein processing,process,2,388
PF01081,GO:0016829,lyase activity,function,20,268
PF01082,GO:0016715,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen",function,1,389
PF01083,GO:0016787,hydrolase activity,function,35,65
PF01084,GO:0005840,ribosome,component,86,74
PF01085,GO:0007267,cell-cell signaling,process,1,390
PF01086,GO:0030132,clathrin coat of coated pit,component,2,391
PF01087,GO:0008108,UDP-glucose:hexose-1-phosphate uridylyltransferase activity,function,2,392
PF01088,GO:0004843,cysteine-type deubiquitinase activity,function,5,393
PF01090,GO:0005840,ribosome,component,86,74
PF01091,GO:0008083,growth factor activity,function,17,11
PF01092,GO:0005840,ribosome,component,86,74
PF01095,GO:0042545,cell wall modification,process,1,394
PF01096,GO:0003676,nucleic acid binding,function,32,39
PF01097,GO:0006952,defense response,process,23,149
PF01098,GO:0051301,cell division,process,9,395
PF01101,GO:0000785,chromatin,component,1,396
PF01103,GO:0019867,outer membrane,component,22,397
PF01104,GO:0016032,viral process,process,29,265
PF01106,GO:0016226,iron-sulfur cluster assembly,process,5,398
PF01108,GO:0005515,protein binding,function,122,10
PF01109,GO:0005129,granulocyte macrophage colony-stimulating factor receptor binding,function,1,399
PF01110,GO:0070120,ciliary neurotrophic factor-mediated signaling pathway,process,1,400
PF01111,GO:0016538,cyclin-dependent protein serine/threonine kinase regulator activity,function,1,401
PF01112,GO:0016787,hydrolase activity,function,35,65
PF01113,GO:0008839,4-hydroxy-tetrahydrodipicolinate reductase,function,2,402
PF01114,GO:0007586,digestion,process,2,403
PF01115,GO:0008290,F-actin capping protein complex,component,2,404
PF01116,GO:0016832,aldehyde-lyase activity,function,3,405
PF01117,GO:0005576,extracellular region,component,203,16
PF01118,GO:0016620,"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor",function,3,406
PF01119,GO:0030983,mismatched DNA binding,function,6,205
PF01120,GO:0004560,alpha-L-fucosidase activity,function,1,407
PF01121,GO:0004140,dephospho-CoA kinase activity,function,1,408
PF01122,GO:0015889,cobalamin transport,process,1,409
PF01123,GO:0090729,toxin activity,function,13,410
PF01124,GO:0016020,membrane,component,541,64
PF01125,GO:0005634,nucleus,component,149,411
PF01126,GO:0004392,heme oxygenase (decyclizing) activity,function,1,412
PF01127,GO:0016627,"oxidoreductase activity, acting on the CH-CH group of donors",function,6,191
PF01128,GO:0070567,cytidylyltransferase activity,function,1,413
PF01129,GO:0106274,NAD+-protein-arginine ADP-ribosyltransferase activity,function,2,414
PF01130,GO:0016020,membrane,component,541,64
PF01131,GO:0003916,DNA topoisomerase activity,function,5,415
PF01132,GO:0006414,translational elongation,process,4,252
PF01139,GO:0008452,RNA ligase activity,function,1,416
PF01142,GO:0009982,pseudouridine synthase activity,function,5,417
PF01144,GO:0008410,CoA-transferase activity,function,2,418
PF01146,GO:0070836,caveola assembly,process,1,419
PF01149,GO:0019104,DNA N-glycosylase activity,function,1,420
PF01150,GO:0016787,hydrolase activity,function,35,65
PF01151,GO:0009922,fatty acid elongase activity,function,1,421
PF01152,GO:0019825,oxygen binding,function,2,422
PF01153,GO:0062023,collagen-containing extracellular matrix,component,2,423
PF01155,GO:0051604,protein maturation,process,2,424
PF01156,GO:0016799,"hydrolase activity, hydrolyzing N-glycosyl compounds",function,3,425
PF01157,GO:0005840,ribosome,component,86,74
PF01158,GO:0005840,ribosome,component,86,74
PF01159,GO:0005840,ribosome,component,86,74
PF01160,GO:0007218,neuropeptide signaling pathway,process,11,426
PF01165,GO:0005840,ribosome,component,86,74
PF01166,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF01174,GO:0042823,pyridoxal phosphate biosynthetic process,process,1,428
PF01176,GO:0006413,translational initiation,process,9,269
PF01177,GO:0036361,"racemase activity, acting on amino acids and derivatives",function,1,429
PF01179,GO:0008131,primary amine oxidase activity,function,3,430
PF01180,GO:0016627,"oxidoreductase activity, acting on the CH-CH group of donors",function,6,191
PF01182,GO:0005975,carbohydrate metabolic process,process,70,55
PF01183,GO:0016998,cell wall macromolecule catabolic process,process,3,355
PF01184,GO:0016020,membrane,component,541,64
PF01185,GO:0009277,fungal-type cell wall,component,3,431
PF01186,GO:0016641,"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor",function,1,432
PF01191,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF01192,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF01193,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF01194,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF01195,GO:0004045,aminoacyl-tRNA hydrolase activity,function,2,433
PF01196,GO:0005840,ribosome,component,86,74
PF01197,GO:0005840,ribosome,component,86,74
PF01198,GO:0005840,ribosome,component,86,74
PF01199,GO:0005840,ribosome,component,86,74
PF01200,GO:0005840,ribosome,component,86,74
PF01203,GO:0015628,protein secretion by the type II secretion system,process,5,434
PF01204,GO:0005991,trehalose metabolic process,process,1,435
PF01208,GO:0004853,uroporphyrinogen decarboxylase activity,function,1,436
PF01210,GO:0046168,glycerol-3-phosphate catabolic process,process,1,437
PF01212,GO:0006520,amino acid metabolic process,process,8,94
PF01213,GO:0007010,cytoskeleton organization,process,4,438
PF01214,GO:0005956,protein kinase CK2 complex,component,1,439
PF01215,GO:0005740,mitochondrial envelope,component,2,440
PF01216,GO:0005509,calcium ion binding,function,34,15
PF01218,GO:0004109,coproporphyrinogen oxidase activity,function,1,441
PF01219,GO:0008654,phospholipid biosynthetic process,process,6,442
PF01220,GO:0003855,3-dehydroquinate dehydratase activity,function,2,443
PF01221,GO:0030286,dynein complex,component,2,444
PF01222,GO:0016628,"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor",function,1,445
PF01223,GO:0003676,nucleic acid binding,function,32,39
PF01225,GO:0016881,acid-amino acid ligase activity,function,3,446
PF01226,GO:0022857,transmembrane transporter activity,function,25,34
PF01228,GO:0003824,catalytic activity,function,50,132
PF01230,GO:0003824,catalytic activity,function,50,132
PF01231,GO:0020037,heme binding,function,26,17
PF01232,GO:0016491,oxidoreductase activity,function,68,22
PF01233,GO:0004379,glycylpeptide N-tetradecanoyltransferase activity,function,2,447
PF01234,GO:0008168,methyltransferase activity,function,37,63
PF01235,GO:0005283,amino acid:sodium symporter activity,function,1,448
PF01237,GO:0008289,lipid binding,function,11,449
PF01239,GO:0018342,protein prenylation,process,1,450
PF01241,GO:0009522,photosystem I,component,10,298
PF01244,GO:0070573,metallodipeptidase activity,function,1,451
PF01245,GO:0005840,ribosome,component,86,74
PF01247,GO:0005840,ribosome,component,86,74
PF01249,GO:0005840,ribosome,component,86,74
PF01250,GO:0019843,rRNA binding,function,6,73
PF01251,GO:0005840,ribosome,component,86,74
PF01252,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF01253,GO:0006413,translational initiation,process,9,269
PF01254,GO:0000786,nucleosome,component,4,453
PF01255,GO:0016765,"transferase activity, transferring alkyl or aryl (other than methyl) groups",function,5,131
PF01256,GO:0016836,hydro-lyase activity,function,5,343
PF01258,GO:0008270,zinc ion binding,function,101,229
PF01263,GO:0016853,isomerase activity,function,9,454
PF01264,GO:0004107,chorismate synthase activity,function,1,455
PF01265,GO:0004408,holocytochrome-c synthase activity,function,1,456
PF01266,GO:0016491,oxidoreductase activity,function,68,22
PF01267,GO:0008290,F-actin capping protein complex,component,2,404
PF01268,GO:0004329,formate-tetrahydrofolate ligase activity,function,1,457
PF01269,GO:0006364,rRNA processing,process,23,458
PF01270,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF01271,GO:0030141,secretory granule,component,2,459
PF01272,GO:0032784,regulation of DNA-templated transcription elongation,process,2,460
PF01273,GO:0008289,lipid binding,function,11,449
PF01274,GO:0004474,malate synthase activity,function,1,461
PF01275,GO:0016020,membrane,component,541,64
PF01276,GO:0003824,catalytic activity,function,50,132
PF01277,GO:0012511,monolayer-surrounded lipid storage body,component,1,462
PF01278,GO:0004175,endopeptidase activity,function,1,463
PF01279,GO:0005179,hormone activity,function,28,21
PF01280,GO:0005840,ribosome,component,86,74
PF01282,GO:0005840,ribosome,component,86,74
PF01283,GO:0005840,ribosome,component,86,74
PF01284,GO:0016020,membrane,component,541,64
PF01285,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01287,GO:0045905,positive regulation of translational termination,process,1,464
PF01288,GO:0009396,folic acid-containing compound biosynthetic process,process,1,465
PF01289,GO:0015485,cholesterol binding,function,1,466
PF01290,GO:0003785,actin monomer binding,function,1,467
PF01291,GO:0005125,cytokine activity,function,10,468
PF01292,GO:0009055,electron transfer activity,function,20,14
PF01293,GO:0004612,phosphoenolpyruvate carboxykinase (ATP) activity,function,1,469
PF01294,GO:0005840,ribosome,component,86,74
PF01295,GO:0006171,cAMP biosynthetic process,process,3,470
PF01296,GO:0005179,hormone activity,function,28,21
PF01297,GO:0030001,metal ion transport,process,5,471
PF01300,GO:0003725,double-stranded RNA binding,function,3,369
PF01303,GO:0007338,single fertilization,process,1,472
PF01304,GO:0031411,gas vesicle,component,3,473
PF01306,GO:0005351,carbohydrate:proton symporter activity,function,1,474
PF01308,GO:0015288,porin activity,function,8,475
PF01309,GO:0019031,viral envelope,component,33,212
PF01310,GO:0031423,hexon binding,function,2,476
PF01311,GO:0006605,protein targeting,process,3,232
PF01312,GO:0009306,protein secretion,process,11,123
PF01313,GO:0009306,protein secretion,process,11,123
PF01314,GO:0016625,"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor",function,2,477
PF01316,GO:0006525,arginine metabolic process,process,2,478
PF01318,GO:0019028,viral capsid,component,65,138
PF01320,GO:0015643,toxic substance binding,function,6,479
PF01322,GO:0009055,electron transfer activity,function,20,14
PF01323,GO:0016491,oxidoreductase activity,function,68,22
PF01325,GO:0003677,DNA binding,function,320,19
PF01326,GO:0016310,phosphorylation,process,6,177
PF01327,GO:0042586,peptide deformylase activity,function,1,480
PF01328,GO:0004601,peroxidase activity,function,3,481
PF01329,GO:0008124,4-alpha-hydroxytetrahydrobiopterin dehydratase activity,function,1,482
PF01330,GO:0009378,four-way junction helicase activity,function,4,483
PF01331,GO:0004484,mRNA guanylyltransferase activity,function,2,484
PF01333,GO:0042651,thylakoid membrane,component,3,485
PF01335,GO:0042981,regulation of apoptotic process,process,5,243
PF01336,GO:0003676,nucleic acid binding,function,32,39
PF01338,GO:0005576,extracellular region,component,203,16
PF01339,GO:0008984,protein-glutamate methylesterase activity,function,1,486
PF01340,GO:0006555,methionine metabolic process,process,2,487
PF01341,GO:0030245,cellulose catabolic process,process,4,488
PF01342,GO:0003677,DNA binding,function,320,19
PF01343,GO:0008233,peptidase activity,function,18,349
PF01344,GO:0005515,protein binding,function,122,10
PF01346,GO:0006457,protein folding,process,14,489
PF01347,GO:0005319,lipid transporter activity,function,4,490
PF01348,GO:0006397,mRNA processing,process,11,491
PF01350,GO:0016070,RNA metabolic process,process,4,492
PF01351,GO:0004523,RNA-DNA hybrid ribonuclease activity,function,5,31
PF01352,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF01353,GO:0008218,bioluminescence,process,3,493
PF01355,GO:0019646,aerobic electron transport chain,process,2,494
PF01356,GO:0015066,alpha-amylase inhibitor activity,function,1,495
PF01361,GO:0006725,cellular aromatic compound metabolic process,process,6,324
PF01363,GO:0046872,metal ion binding,function,48,38
PF01364,GO:0008234,cysteine-type peptidase activity,function,9,45
PF01365,GO:0070588,calcium ion transmembrane transport,process,1,496
PF01366,GO:0019073,viral DNA genome packaging,process,5,497
PF01367,GO:0003824,catalytic activity,function,50,132
PF01369,GO:0032012,regulation of ARF protein signal transduction,process,1,498
PF01371,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01372,GO:0004860,protein kinase inhibitor activity,function,2,499
PF01373,GO:0016161,beta-amylase activity,function,1,500
PF01374,GO:0016977,chitosanase activity,function,2,501
PF01375,GO:0090729,toxin activity,function,13,410
PF01376,GO:0005576,extracellular region,component,203,16
PF01378,GO:0005618,cell wall,component,7,502
PF01379,GO:0004418,hydroxymethylbilane synthase activity,function,2,503
PF01380,GO:0097367,carbohydrate derivative binding,function,2,504
PF01382,GO:0009374,biotin binding,function,1,505
PF01383,GO:0030089,phycobilisome,component,5,187
PF01384,GO:0005315,inorganic phosphate transmembrane transporter activity,function,1,506
PF01386,GO:0005840,ribosome,component,86,74
PF01388,GO:0003677,DNA binding,function,320,19
PF01389,GO:0009279,cell outer membrane,component,13,308
PF01392,GO:0005515,protein binding,function,122,10
PF01393,GO:0005634,nucleus,component,149,411
PF01395,GO:0005549,odorant binding,function,2,507
PF01396,GO:0005694,chromosome,component,4,508
PF01397,GO:0010333,terpene synthase activity,function,2,509
PF01398,GO:0008237,metallopeptidase activity,function,5,510
PF01400,GO:0004222,metalloendopeptidase activity,function,25,511
PF01401,GO:0008241,peptidyl-dipeptidase activity,function,1,512
PF01402,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF01403,GO:0005515,protein binding,function,122,10
PF01404,GO:0005515,protein binding,function,122,10
PF01405,GO:0009539,photosystem II reaction center,component,6,513
PF01407,GO:0016032,viral process,process,29,265
PF01408,GO:0000166,nucleotide binding,function,30,57
PF01409,GO:0043039,tRNA aminoacylation,process,3,287
PF01410,GO:0005201,extracellular matrix structural constituent,function,4,514
PF01411,GO:0006419,alanyl-tRNA aminoacylation,process,1,515
PF01412,GO:0005096,GTPase activator activity,function,9,516
PF01413,GO:0005581,collagen trimer,component,1,517
PF01414,GO:0007154,cell communication,process,4,518
PF01415,GO:0005139,interleukin-7 receptor binding,function,1,519
PF01416,GO:0009982,pseudouridine synthase activity,function,5,417
PF01418,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01420,GO:0003677,DNA binding,function,320,19
PF01421,GO:0004222,metalloendopeptidase activity,function,25,511
PF01422,GO:0008270,zinc ion binding,function,101,229
PF01424,GO:0003676,nucleic acid binding,function,32,39
PF01426,GO:0003682,chromatin binding,function,4,520
PF01427,GO:0016805,dipeptidase activity,function,2,521
PF01428,GO:0008270,zinc ion binding,function,101,229
PF01429,GO:0003677,DNA binding,function,320,19
PF01430,GO:0051082,unfolded protein binding,function,8,122
PF01431,GO:0004222,metalloendopeptidase activity,function,25,511
PF01432,GO:0004222,metalloendopeptidase activity,function,25,511
PF01433,GO:0008237,metallopeptidase activity,function,5,510
PF01434,GO:0004176,ATP-dependent peptidase activity,function,3,522
PF01435,GO:0004222,metalloendopeptidase activity,function,25,511
PF01436,GO:0005515,protein binding,function,122,10
PF01439,GO:0046872,metal ion binding,function,48,38
PF01440,GO:0019028,viral capsid,component,65,138
PF01441,GO:0009279,cell outer membrane,component,13,308
PF01442,GO:0042157,lipoprotein metabolic process,process,5,523
PF01443,GO:0005524,ATP binding,function,178,2
PF01446,GO:0006260,DNA replication,process,57,300
PF01447,GO:0004222,metalloendopeptidase activity,function,25,511
PF01450,GO:0004455,ketol-acid reductoisomerase activity,function,1,524
PF01457,GO:0004222,metalloendopeptidase activity,function,25,511
PF01458,GO:0016226,iron-sulfur cluster assembly,process,5,398
PF01459,GO:0005741,mitochondrial outer membrane,component,4,525
PF01466,GO:0006511,ubiquitin-dependent protein catabolic process,process,9,526
PF01467,GO:0009058,biosynthetic process,process,18,202
PF01472,GO:0003723,RNA binding,function,118,6
PF01474,GO:0003849,3-deoxy-7-phosphoheptulonate synthase activity,function,1,527
PF01475,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01477,GO:0005515,protein binding,function,122,10
PF01478,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF01479,GO:0003723,RNA binding,function,118,6
PF01480,GO:0006397,mRNA processing,process,11,491
PF01481,GO:0019013,viral nucleocapsid,component,17,317
PF01483,GO:0004252,serine-type endopeptidase activity,function,29,35
PF01484,GO:0042302,structural constituent of cuticle,function,4,528
PF01485,GO:0008270,zinc ion binding,function,101,229
PF01486,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF01487,GO:0003855,3-dehydroquinate dehydratase activity,function,2,443
PF01491,GO:0008199,ferric iron binding,function,3,95
PF01493,GO:0016491,oxidoreductase activity,function,68,22
PF01494,GO:0071949,FAD binding,function,4,529
PF01496,GO:0033179,"proton-transporting V-type ATPase, V0 domain",component,2,530
PF01498,GO:0015074,DNA integration,process,12,234
PF01499,GO:0019072,viral genome packaging,process,2,531
PF01500,GO:0045095,keratin filament,component,3,532
PF01501,GO:0016757,glycosyltransferase activity,function,16,218
PF01502,GO:0004635,phosphoribosyl-AMP cyclohydrolase activity,function,1,533
PF01504,GO:0052742,phosphatidylinositol kinase activity,function,1,534
PF01506,GO:0017111,ribonucleoside triphosphate phosphatase activity,function,10,367
PF01507,GO:0003824,catalytic activity,function,50,132
PF01509,GO:0006396,RNA processing,process,18,535
PF01510,GO:0008745,N-acetylmuramoyl-L-alanine amidase activity,function,2,536
PF01513,GO:0006741,NADP biosynthetic process,process,1,537
PF01515,GO:0016746,acyltransferase activity,function,9,88
PF01516,GO:0019028,viral capsid,component,65,138
PF01517,GO:0046718,viral entry into host cell,process,6,538
PF01518,GO:0003727,single-stranded RNA binding,function,1,539
PF01520,GO:0008745,N-acetylmuramoyl-L-alanine amidase activity,function,2,536
PF01522,GO:0016810,"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds",function,1,540
PF01523,GO:0006508,proteolysis,process,84,345
PF01524,GO:0060967,negative regulation of gene silencing by regulatory ncRNA,process,1,541
PF01525,GO:0030430,host cell cytoplasm,component,5,542
PF01526,GO:0004803,transposase activity,function,10,327
PF01527,GO:0004803,transposase activity,function,10,327
PF01529,GO:0016409,palmitoyltransferase activity,function,1,543
PF01530,GO:0008270,zinc ion binding,function,101,229
PF01531,GO:0008107,galactoside 2-alpha-L-fucosyltransferase activity,function,2,544
PF01532,GO:0004571,"mannosyl-oligosaccharide 1,2-alpha-mannosidase activity",function,1,545
PF01533,GO:0019013,viral nucleocapsid,component,17,317
PF01534,GO:0007166,cell surface receptor signaling pathway,process,3,546
PF01537,GO:0016020,membrane,component,541,64
PF01538,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF01539,GO:0019031,viral envelope,component,33,212
PF01542,GO:0005198,structural molecule activity,function,90,30
PF01543,GO:0019028,viral capsid,component,65,138
PF01544,GO:0046873,metal ion transmembrane transporter activity,function,3,547
PF01545,GO:0008324,monoatomic cation transmembrane transporter activity,function,5,548
PF01546,GO:0016787,hydrolase activity,function,35,65
PF01548,GO:0004803,transposase activity,function,10,327
PF01553,GO:0016746,acyltransferase activity,function,9,88
PF01554,GO:0042910,xenobiotic transmembrane transporter activity,function,2,549
PF01555,GO:0006306,DNA methylation,process,2,550
PF01557,GO:0003824,catalytic activity,function,50,132
PF01558,GO:0016903,"oxidoreductase activity, acting on the aldehyde or oxo group of donors",function,2,551
PF01559,GO:0045735,nutrient reservoir activity,function,3,552
PF01561,GO:0019049,virus-mediated perturbation of host defense response,process,7,553
PF01563,GO:0055036,virion membrane,component,7,302
PF01565,GO:0050660,flavin adenine dinucleotide binding,function,11,554
PF01566,GO:0046873,metal ion transmembrane transporter activity,function,3,547
PF01567,GO:0019049,virus-mediated perturbation of host defense response,process,7,553
PF01568,GO:0043546,molybdopterin cofactor binding,function,1,555
PF01573,GO:0044156,host cell junction,component,1,556
PF01576,GO:0016459,myosin complex,component,4,24
PF01577,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF01578,GO:0017004,cytochrome complex assembly,process,6,557
PF01580,GO:0000166,nucleotide binding,function,30,57
PF01581,GO:0007218,neuropeptide signaling pathway,process,11,426
PF01582,GO:0007165,signal transduction,process,34,8
PF01584,GO:0006935,chemotaxis,process,7,558
PF01585,GO:0003676,nucleic acid binding,function,32,39
PF01588,GO:0000049,tRNA binding,function,4,559
PF01589,GO:0055036,virion membrane,component,7,302
PF01590,GO:0005515,protein binding,function,122,10
PF01591,GO:0006000,fructose metabolic process,process,1,560
PF01592,GO:0016226,iron-sulfur cluster assembly,process,5,398
PF01593,GO:0016491,oxidoreductase activity,function,68,22
PF01596,GO:0008171,O-methyltransferase activity,function,2,333
PF01599,GO:0005840,ribosome,component,86,74
PF01600,GO:0019064,fusion of virus membrane with host plasma membrane,process,9,215
PF01601,GO:0046813,receptor-mediated virion attachment to host cell,process,1,561
PF01602,GO:0030117,membrane coat,component,2,562
PF01603,GO:0000159,protein phosphatase type 2A complex,component,1,563
PF01607,GO:0008061,chitin binding,function,4,82
PF01608,GO:0003779,actin binding,function,13,111
PF01609,GO:0004803,transposase activity,function,10,327
PF01612,GO:0006139,nucleobase-containing compound metabolic process,process,3,564
PF01613,GO:0010181,FMN binding,function,8,120
PF01621,GO:0016020,membrane,component,541,64
PF01623,GO:0003676,nucleic acid binding,function,32,39
PF01624,GO:0030983,mismatched DNA binding,function,6,205
PF01625,GO:0008113,peptide-methionine (S)-S-oxide reductase activity,function,1,565
PF01627,GO:0000160,phosphorelay signal transduction system,process,16,29
PF01628,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF01630,GO:0004415,hyalurononglucosaminidase activity,function,2,566
PF01632,GO:0005840,ribosome,component,86,74
PF01634,GO:0003879,ATP phosphoribosyltransferase activity,function,2,567
PF01635,GO:0039660,structural constituent of virion,function,1,568
PF01637,GO:0005524,ATP binding,function,178,2
PF01640,GO:0008234,cysteine-type peptidase activity,function,9,45
PF01641,GO:0033743,peptide-methionine (R)-S-oxide reductase activity,function,1,569
PF01642,GO:0016866,intramolecular transferase activity,function,1,570
PF01643,GO:0016790,thiolester hydrolase activity,function,2,571
PF01644,GO:0006031,chitin biosynthetic process,process,1,572
PF01645,GO:0006537,glutamate biosynthetic process,process,1,573
PF01648,GO:0008897,holo-[acyl-carrier-protein] synthase activity,function,2,574
PF01649,GO:0005840,ribosome,component,86,74
PF01650,GO:0008233,peptidase activity,function,18,349
PF01652,GO:0006413,translational initiation,process,9,269
PF01653,GO:0003911,DNA ligase (NAD+) activity,function,3,575
PF01654,GO:0070069,cytochrome complex,component,1,576
PF01655,GO:0005840,ribosome,component,86,74
PF01660,GO:0008174,mRNA methyltransferase activity,function,1,577
PF01664,GO:0019062,virion attachment to host cell,process,5,221
PF01665,GO:0003723,RNA binding,function,118,6
PF01667,GO:0005840,ribosome,component,86,74
PF01668,GO:0003723,RNA binding,function,118,6
PF01669,GO:0019911,structural constituent of myelin sheath,function,1,578
PF01670,GO:0000272,polysaccharide catabolic process,process,4,180
PF01671,GO:0042330,taxis,process,1,579
PF01673,GO:0019031,viral envelope,component,33,212
PF01674,GO:0016042,lipid catabolic process,process,9,580
PF01676,GO:0046872,metal ion binding,function,48,38
PF01678,GO:0008837,diaminopimelate epimerase activity,function,1,581
PF01679,GO:0016020,membrane,component,541,64
PF01686,GO:0039623,T=25 icosahedral viral capsid,component,1,582
PF01687,GO:0008531,riboflavin kinase activity,function,1,583
PF01688,GO:0043657,host cell,component,1,584
PF01690,GO:0019028,viral capsid,component,65,138
PF01691,GO:0019050,suppression by virus of host apoptotic process,process,2,585
PF01692,GO:0019049,virus-mediated perturbation of host defense response,process,7,553
PF01694,GO:0004252,serine-type endopeptidase activity,function,29,35
PF01695,GO:0005524,ATP binding,function,178,2
PF01699,GO:0055085,transmembrane transport,process,55,151
PF01700,GO:0005198,structural molecule activity,function,90,30
PF01701,GO:0009522,photosystem I,component,10,298
PF01702,GO:0016763,pentosyltransferase activity,function,3,586
PF01704,GO:0070569,uridylyltransferase activity,function,1,587
PF01708,GO:0046740,"transport of virus in host, cell to cell",process,6,303
PF01716,GO:0010242,oxygen evolving activity,function,1,588
PF01717,GO:0003871,5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,function,2,589
PF01719,GO:0005727,extrachromosomal circular DNA,component,1,590
PF01721,GO:0042742,defense response to bacterium,process,23,591
PF01723,GO:0005213,structural constituent of egg chorion,function,4,592
PF01725,GO:0009143,nucleoside triphosphate catabolic process,process,2,593
PF01726,GO:0004252,serine-type endopeptidase activity,function,29,35
PF01728,GO:0032259,methylation,process,3,594
PF01729,GO:0004514,nicotinate-nucleotide diphosphorylase (carboxylating) activity,function,1,595
PF01730,GO:0016151,nickel cation binding,function,7,170
PF01731,GO:0004064,arylesterase activity,function,1,596
PF01733,GO:1901642,nucleoside transmembrane transport,process,1,597
PF01734,GO:0006629,lipid metabolic process,process,14,204
PF01735,GO:0009395,phospholipid catabolic process,process,1,598
PF01736,GO:0003677,DNA binding,function,320,19
PF01737,GO:0042549,photosystem II stabilization,process,3,599
PF01738,GO:0016787,hydrolase activity,function,35,65
PF01742,GO:0004222,metalloendopeptidase activity,function,25,511
PF01743,GO:0016779,nucleotidyltransferase activity,function,8,600
PF01747,GO:0004781,sulfate adenylyltransferase (ATP) activity,function,1,601
PF01749,GO:0061608,nuclear import signal receptor activity,function,1,602
PF01750,GO:0008047,enzyme activator activity,function,5,603
PF01752,GO:0004222,metalloendopeptidase activity,function,25,511
PF01754,GO:0008270,zinc ion binding,function,101,229
PF01756,GO:0006635,fatty acid beta-oxidation,process,1,604
PF01757,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF01758,GO:0016020,membrane,component,541,64
PF01762,GO:0016758,hexosyltransferase activity,function,8,605
PF01763,GO:0051276,chromosome organization,process,9,606
PF01764,GO:0006629,lipid metabolic process,process,14,204
PF01766,GO:0005198,structural molecule activity,function,90,30
PF01767,GO:0005198,structural molecule activity,function,90,30
PF01769,GO:0008324,monoatomic cation transmembrane transporter activity,function,5,548
PF01770,GO:0051180,vitamin transport,process,1,607
PF01774,GO:0016151,nickel cation binding,function,7,170
PF01775,GO:0005840,ribosome,component,86,74
PF01776,GO:0005840,ribosome,component,86,74
PF01777,GO:0005840,ribosome,component,86,74
PF01779,GO:0005840,ribosome,component,86,74
PF01780,GO:0005840,ribosome,component,86,74
PF01781,GO:0005840,ribosome,component,86,74
PF01782,GO:0006364,rRNA processing,process,23,458
PF01783,GO:0015934,large ribosomal subunit,component,2,608
PF01785,GO:0044423,virion component,component,16,368
PF01786,GO:0009916,alternative oxidase activity,function,1,609
PF01787,GO:0006413,translational initiation,process,9,269
PF01788,GO:0009539,photosystem II reaction center,component,6,513
PF01789,GO:0019898,extrinsic component of membrane,component,3,610
PF01790,GO:0008961,phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity,function,1,611
PF01791,GO:0016829,lyase activity,function,20,268
PF01793,GO:0000030,mannosyltransferase activity,function,4,612
PF01795,GO:0008168,methyltransferase activity,function,37,63
PF01797,GO:0004803,transposase activity,function,10,327
PF01799,GO:0046872,metal ion binding,function,48,38
PF01801,GO:0016032,viral process,process,29,265
PF01802,GO:0019028,viral capsid,component,65,138
PF01804,GO:0017000,antibiotic biosynthetic process,process,3,613
PF01805,GO:0006396,RNA processing,process,18,535
PF01806,GO:0019079,viral genome replication,process,13,283
PF01807,GO:0003896,DNA primase activity,function,4,614
PF01808,GO:0004643,phosphoribosylaminoimidazolecarboxamide formyltransferase activity,function,1,615
PF01810,GO:0006865,amino acid transport,process,2,616
PF01813,GO:0046961,"proton-transporting ATPase activity, rotational mechanism",function,9,617
PF01817,GO:0046417,chorismate metabolic process,process,1,618
PF01818,GO:0003723,RNA binding,function,118,6
PF01819,GO:0019028,viral capsid,component,65,138
PF01821,GO:0005576,extracellular region,component,203,16
PF01828,GO:0070007,glutamic-type endopeptidase activity,function,1,619
PF01829,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF01830,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF01831,GO:0008234,cysteine-type peptidase activity,function,9,45
PF01832,GO:0004040,amidase activity,function,1,620
PF01834,GO:0000012,single strand break repair,process,1,621
PF01835,GO:0004866,endopeptidase inhibitor activity,function,5,87
PF01840,GO:0043539,protein serine/threonine kinase activator activity,function,2,622
PF01844,GO:0004519,endonuclease activity,function,25,356
PF01845,GO:0008657,"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity",function,1,623
PF01848,GO:0016020,membrane,component,541,64
PF01852,GO:0008289,lipid binding,function,11,449
PF01853,GO:0004402,histone acetyltransferase activity,function,4,624
PF01855,GO:0016491,oxidoreductase activity,function,68,22
PF01857,GO:0051726,regulation of cell cycle,process,5,625
PF01858,GO:0051726,regulation of cell cycle,process,5,625
PF01862,GO:0008792,arginine decarboxylase activity,function,1,626
PF01866,GO:0017183,protein histidyl modification to diphthamide,process,1,627
PF01867,GO:0051607,defense response to virus,process,4,628
PF01868,GO:0030677,ribonuclease P complex,component,3,629
PF01872,GO:0008703,5-amino-6-(5-phosphoribosylamino)uracil reductase activity,function,1,630
PF01873,GO:0006413,translational initiation,process,9,269
PF01874,GO:0046917,triphosphoribosyl-dephospho-CoA synthase activity,function,1,631
PF01876,GO:0008033,tRNA processing,process,8,632
PF01880,GO:0005506,iron ion binding,function,22,142
PF01884,GO:0016765,"transferase activity, transferring alkyl or aryl (other than methyl) groups",function,5,131
PF01885,GO:0016740,transferase activity,function,18,291
PF01888,GO:0009236,cobalamin biosynthetic process,process,9,633
PF01890,GO:0009236,cobalamin biosynthetic process,process,9,633
PF01891,GO:0000041,transition metal ion transport,process,1,634
PF01896,GO:0006269,"DNA replication, synthesis of RNA primer",process,4,635
PF01899,GO:0008324,monoatomic cation transmembrane transporter activity,function,5,548
PF01900,GO:0030677,ribonuclease P complex,component,3,629
PF01903,GO:0016829,lyase activity,function,20,268
PF01907,GO:0005840,ribosome,component,86,74
PF01909,GO:0016779,nucleotidyltransferase activity,function,8,600
PF01912,GO:0042256,cytosolic ribosome assembly,process,1,636
PF01913,GO:0006730,one-carbon metabolic process,process,4,637
PF01914,GO:0016020,membrane,component,541,64
PF01915,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF01916,GO:0008612,peptidyl-lysine modification to peptidyl-hypusine,process,1,638
PF01917,GO:0097588,archaeal or bacterial-type flagellum-dependent cell motility,process,2,639
PF01918,GO:0003676,nucleic acid binding,function,32,39
PF01920,GO:0016272,prefoldin complex,component,1,640
PF01921,GO:0006430,lysyl-tRNA aminoacylation,process,1,641
PF01922,GO:0048500,signal recognition particle,component,3,642
PF01924,GO:0046872,metal ion binding,function,48,38
PF01925,GO:0016020,membrane,component,541,64
PF01926,GO:0005525,GTP binding,function,26,36
PF01929,GO:0005840,ribosome,component,86,74
PF01933,GO:0043743,LPPG:FO 2-phospho-L-lactate transferase activity,function,1,643
PF01934,GO:0110001,toxin-antitoxin complex,component,3,644
PF01936,GO:0004540,RNA nuclease activity,function,7,293
PF01939,GO:0004519,endonuclease activity,function,25,356
PF01940,GO:0016020,membrane,component,541,64
PF01943,GO:0016020,membrane,component,541,64
PF01956,GO:0016020,membrane,component,541,64
PF01958,GO:0033735,aspartate dehydrogenase activity,function,1,645
PF01959,GO:0003856,3-dehydroquinate synthase activity,function,1,646
PF01960,GO:0006526,arginine biosynthetic process,process,1,647
PF01964,GO:0009228,thiamine biosynthetic process,process,2,648
PF01967,GO:0006777,Mo-molybdopterin cofactor biosynthetic process,process,4,649
PF01968,GO:0016787,hydrolase activity,function,35,65
PF01972,GO:0016020,membrane,component,541,64
PF01974,GO:0000213,tRNA-intron endonuclease activity,function,2,650
PF01975,GO:0016787,hydrolase activity,function,35,65
PF01979,GO:0016787,hydrolase activity,function,35,65
PF01981,GO:0004045,aminoacyl-tRNA hydrolase activity,function,2,433
PF01982,GO:0016773,"phosphotransferase activity, alcohol group as acceptor",function,8,160
PF01983,GO:0043814,phospholactate guanylyltransferase activity,function,1,651
PF01984,GO:0003677,DNA binding,function,320,19
PF01985,GO:0003723,RNA binding,function,118,6
PF01988,GO:0030026,intracellular manganese ion homeostasis,process,1,652
PF01990,GO:0034220,monoatomic ion transmembrane transport,process,3,125
PF01991,GO:0033178,"proton-transporting two-sector ATPase complex, catalytic domain",component,2,653
PF01992,GO:0046961,"proton-transporting ATPase activity, rotational mechanism",function,9,617
PF01993,GO:0008901,ferredoxin hydrogenase activity,function,1,654
PF01994,GO:0002128,tRNA nucleoside ribose methylation,process,1,655
PF01997,GO:0043565,sequence-specific DNA binding,function,17,41
PF02005,GO:0160102,tRNA (guanine(10)-N2)-methyltransferase activity,function,1,656
PF02007,GO:0006730,one-carbon metabolic process,process,4,637
PF02008,GO:0008270,zinc ion binding,function,101,229
PF02011,GO:0030245,cellulose catabolic process,process,4,488
PF02015,GO:0008810,cellulase activity,function,6,657
PF02017,GO:0006915,apoptotic process,process,10,658
PF02018,GO:0016798,"hydrolase activity, acting on glycosyl bonds",function,3,659
PF02020,GO:0005515,protein binding,function,122,10
PF02022,GO:0008270,zinc ion binding,function,101,229
PF02024,GO:0005179,hormone activity,function,28,21
PF02025,GO:0005137,interleukin-5 receptor binding,function,1,660
PF02028,GO:0071705,nitrogen compound transport,process,2,661
PF02031,GO:0004222,metalloendopeptidase activity,function,25,511
PF02033,GO:0006364,rRNA processing,process,23,458
PF02035,GO:0042381,hemolymph coagulation,process,3,662
PF02038,GO:0043269,regulation of monoatomic ion transport,process,1,663
PF02040,GO:0015700,arsenite transport,process,1,664
PF02041,GO:0010011,auxin binding,function,1,665
PF02043,GO:0015979,photosynthesis,process,41,135
PF02044,GO:0007218,neuropeptide signaling pathway,process,11,426
PF02045,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF02046,GO:0005751,mitochondrial respiratory chain complex IV,component,6,666
PF02048,GO:0090729,toxin activity,function,13,410
PF02049,GO:0009288,bacterial-type flagellum,component,4,667
PF02050,GO:0009288,bacterial-type flagellum,component,4,667
PF02052,GO:0042742,defense response to bacterium,process,23,591
PF02053,GO:0008270,zinc ion binding,function,101,229
PF02056,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF02058,GO:0030250,guanylate cyclase activator activity,function,1,668
PF02059,GO:0005135,interleukin-3 receptor binding,function,1,669
PF02060,GO:0005249,voltage-gated potassium channel activity,function,3,670
PF02063,GO:0005516,calmodulin binding,function,10,671
PF02064,GO:0006605,protein targeting,process,3,232
PF02066,GO:0005507,copper ion binding,function,17,54
PF02067,GO:0046872,metal ion binding,function,48,38
PF02068,GO:0008270,zinc ion binding,function,101,229
PF02069,GO:0046872,metal ion binding,function,48,38
PF02070,GO:0006940,regulation of smooth muscle contraction,process,1,672
PF02072,GO:0007631,feeding behavior,process,2,673
PF02073,GO:0004177,aminopeptidase activity,function,3,674
PF02074,GO:0004181,metallocarboxypeptidase activity,function,2,116
PF02075,GO:0004520,DNA endonuclease activity,function,1,675
PF02076,GO:0004932,mating-type factor pheromone receptor activity,function,2,676
PF02077,GO:0016020,membrane,component,541,64
PF02079,GO:0000786,nucleosome,component,4,453
PF02080,GO:0008324,monoatomic cation transmembrane transporter activity,function,5,548
PF02083,GO:0097746,blood vessel diameter maintenance,process,1,677
PF02084,GO:0007342,fusion of sperm to egg plasma membrane involved in single fertilization,process,6,678
PF02085,GO:0009055,electron transfer activity,function,20,14
PF02086,GO:0032775,DNA methylation on adenine,process,2,679
PF02087,GO:0051381,histamine binding,function,1,680
PF02088,GO:0030193,regulation of blood coagulation,process,1,681
PF02091,GO:0006426,glycyl-tRNA aminoacylation,process,2,682
PF02092,GO:0004820,glycine-tRNA ligase activity,function,2,683
PF02093,GO:0019068,virion assembly,process,8,256
PF02095,GO:0005199,structural constituent of cell wall,function,4,179
PF02098,GO:0043176,amine binding,function,1,684
PF02099,GO:0016579,protein deubiquitination,process,3,192
PF02100,GO:0008073,ornithine decarboxylase inhibitor activity,function,1,685
PF02101,GO:0072545,tyrosine binding,function,1,686
PF02102,GO:0004222,metalloendopeptidase activity,function,25,511
PF02104,GO:0016020,membrane,component,541,64
PF02106,GO:0036297,interstrand cross-link repair,process,4,687
PF02107,GO:0009427,"bacterial-type flagellum basal body, distal rod, L ring",component,1,688
PF02109,GO:0008250,oligosaccharyltransferase complex,component,2,689
PF02110,GO:0004417,hydroxyethylthiazole kinase activity,function,1,690
PF02112,GO:0004115,"3',5'-cyclic-AMP phosphodiesterase activity",function,1,691
PF02113,GO:0004185,serine-type carboxypeptidase activity,function,3,196
PF02115,GO:0007266,Rho protein signal transduction,process,1,692
PF02116,GO:0004932,mating-type factor pheromone receptor activity,function,2,676
PF02117,GO:0007606,sensory perception of chemical stimulus,process,4,693
PF02118,GO:0007606,sensory perception of chemical stimulus,process,4,693
PF02119,GO:0009428,"bacterial-type flagellum basal body, distal rod, P ring",component,1,694
PF02121,GO:0005548,phospholipid transporter activity,function,1,695
PF02122,GO:0004252,serine-type endopeptidase activity,function,29,35
PF02123,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF02126,GO:0009056,catabolic process,process,1,696
PF02127,GO:0004177,aminopeptidase activity,function,3,674
PF02128,GO:0005615,extracellular space,component,21,129
PF02129,GO:0016787,hydrolase activity,function,35,65
PF02130,GO:0006364,rRNA processing,process,23,458
PF02132,GO:0006310,DNA recombination,process,25,386
PF02133,GO:0022857,transmembrane transporter activity,function,25,34
PF02137,GO:0004000,adenosine deaminase activity,function,1,697
PF02140,GO:0030246,carbohydrate binding,function,20,59
PF02144,GO:0000077,DNA damage checkpoint signaling,process,5,698
PF02145,GO:0051056,regulation of small GTPase mediated signal transduction,process,1,699
PF02146,GO:0070403,NAD+ binding,function,3,700
PF02148,GO:0008270,zinc ion binding,function,101,229
PF02150,GO:0006351,DNA-templated transcription,process,53,701
PF02151,GO:0005515,protein binding,function,122,10
PF02152,GO:0006760,folic acid-containing compound metabolic process,process,1,702
PF02153,GO:0070403,NAD+ binding,function,3,700
PF02154,GO:0009425,bacterial-type flagellum basal body,component,2,703
PF02155,GO:0042921,glucocorticoid receptor signaling pathway,process,1,704
PF02156,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF02159,GO:0030284,nuclear estrogen receptor activity,function,1,705
PF02160,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF02161,GO:0003707,nuclear steroid receptor activity,function,1,706
PF02163,GO:0006508,proteolysis,process,84,345
PF02165,GO:0005634,nucleus,component,149,411
PF02166,GO:0030521,androgen receptor signaling pathway,process,1,707
PF02167,GO:0009055,electron transfer activity,function,20,14
PF02170,GO:0003723,RNA binding,function,118,6
PF02171,GO:0003676,nucleic acid binding,function,32,39
PF02172,GO:0003712,transcription coregulator activity,function,25,708
PF02173,GO:0005515,protein binding,function,122,10
PF02175,GO:0007606,sensory perception of chemical stimulus,process,4,693
PF02176,GO:0008270,zinc ion binding,function,101,229
PF02177,GO:0008201,heparin binding,function,3,709
PF02178,GO:0003677,DNA binding,function,320,19
PF02179,GO:0051087,protein-folding chaperone binding,function,4,710
PF02180,GO:0042981,regulation of apoptotic process,process,5,243
PF02183,GO:0043565,sequence-specific DNA binding,function,17,41
PF02184,GO:0006396,RNA processing,process,18,535
PF02185,GO:0007165,signal transduction,process,34,8
PF02186,GO:0006367,transcription initiation at RNA polymerase II promoter,process,9,711
PF02187,GO:0008017,microtubule binding,function,17,712
PF02188,GO:0030695,GTPase regulator activity,function,1,713
PF02189,GO:0007166,cell surface receptor signaling pathway,process,3,546
PF02196,GO:0007165,signal transduction,process,34,8
PF02198,GO:0043565,sequence-specific DNA binding,function,17,41
PF02200,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF02202,GO:0007217,tachykinin receptor signaling pathway,process,2,714
PF02203,GO:0006935,chemotaxis,process,7,558
PF02205,GO:0003779,actin binding,function,13,111
PF02207,GO:0008270,zinc ion binding,function,101,229
PF02209,GO:0007010,cytoskeleton organization,process,4,438
PF02212,GO:0003924,GTPase activity,function,10,3
PF02213,GO:0005515,protein binding,function,122,10
PF02214,GO:0051260,protein homooligomerization,process,3,172
PF02216,GO:0019865,immunoglobulin binding,function,2,715
PF02217,GO:0003688,DNA replication origin binding,function,2,716
PF02219,GO:0004489,methylenetetrahydrofolate reductase (NAD(P)H) activity,function,1,717
PF02224,GO:0004127,cytidylate kinase activity,function,1,718
PF02226,GO:0019028,viral capsid,component,65,138
PF02228,GO:0019013,viral nucleocapsid,component,17,317
PF02229,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02230,GO:0016787,hydrolase activity,function,35,65
PF02232,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02234,GO:0004861,cyclin-dependent protein serine/threonine kinase inhibitor activity,function,2,719
PF02236,GO:0006268,DNA unwinding involved in DNA replication,process,1,720
PF02237,GO:0036211,protein modification process,process,6,721
PF02240,GO:0050524,coenzyme-B sulfoethylthiotransferase activity,function,5,722
PF02241,GO:0050524,coenzyme-B sulfoethylthiotransferase activity,function,5,722
PF02245,GO:0003905,alkylbase DNA N-glycosylase activity,function,1,723
PF02247,GO:0019028,viral capsid,component,65,138
PF02248,GO:0044219,host cell plasmodesma,component,1,724
PF02249,GO:0050524,coenzyme-B sulfoethylthiotransferase activity,function,5,722
PF02251,GO:0008537,proteasome activator complex,component,2,725
PF02252,GO:0008537,proteasome activator complex,component,2,725
PF02253,GO:0004620,phospholipase activity,function,3,726
PF02254,GO:0006813,potassium ion transport,process,11,727
PF02255,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF02257,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02258,GO:0019836,hemolysis by symbiont of host erythrocytes,process,6,728
PF02259,GO:0005515,protein binding,function,122,10
PF02260,GO:0005515,protein binding,function,122,10
PF02261,GO:0006523,alanine biosynthetic process,process,1,729
PF02262,GO:0007166,cell surface receptor signaling pathway,process,3,546
PF02263,GO:0003924,GTPase activity,function,10,3
PF02264,GO:0034219,carbohydrate transmembrane transport,process,2,730
PF02265,GO:0006308,DNA catabolic process,process,2,731
PF02267,GO:0003953,NAD+ nucleosidase activity,function,1,732
PF02268,GO:0005672,transcription factor TFIIA complex,component,3,733
PF02269,GO:0006366,transcription by RNA polymerase II,process,3,734
PF02271,GO:0006122,"mitochondrial electron transport, ubiquinol to cytochrome c",process,5,735
PF02272,GO:0003676,nucleic acid binding,function,32,39
PF02273,GO:0006631,fatty acid metabolic process,process,5,275
PF02276,GO:0030077,plasma membrane light-harvesting complex,component,3,226
PF02277,GO:0008939,nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity,function,1,736
PF02278,GO:0016829,lyase activity,function,20,268
PF02282,GO:0006260,DNA replication,process,57,300
PF02283,GO:0043752,adenosylcobinamide kinase activity,function,1,737
PF02284,GO:0006123,"mitochondrial electron transport, cytochrome c to oxygen",process,6,738
PF02285,GO:0006123,"mitochondrial electron transport, cytochrome c to oxygen",process,6,738
PF02286,GO:0031419,cobalamin binding,function,4,739
PF02289,GO:0018759,methenyltetrahydromethanopterin cyclohydrolase activity,function,1,740
PF02290,GO:0005786,"signal recognition particle, endoplasmic reticulum targeting",component,2,741
PF02291,GO:0006352,DNA-templated transcription initiation,process,13,162
PF02293,GO:0016020,membrane,component,541,64
PF02294,GO:0004521,RNA endonuclease activity,function,6,223
PF02295,GO:0003726,double-stranded RNA adenosine deaminase activity,function,1,742
PF02296,GO:0030131,clathrin adaptor complex,component,2,743
PF02298,GO:0009055,electron transfer activity,function,20,14
PF02300,GO:0016020,membrane,component,541,64
PF02302,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF02303,GO:0003697,single-stranded DNA binding,function,14,189
PF02304,GO:0019069,viral capsid assembly,process,9,744
PF02305,GO:0005198,structural molecule activity,function,90,30
PF02306,GO:0019048,modulation by virus of host process,process,6,745
PF02310,GO:0031419,cobalamin binding,function,4,739
PF02311,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02312,GO:0003713,transcription coactivator activity,function,5,746
PF02313,GO:0006106,fumarate metabolic process,process,1,747
PF02315,GO:0004022,alcohol dehydrogenase (NAD+) activity,function,1,748
PF02316,GO:0003677,DNA binding,function,320,19
PF02317,GO:0016491,oxidoreductase activity,function,68,22
PF02319,GO:0005667,transcription regulator complex,component,1,749
PF02321,GO:0015562,efflux transmembrane transporter activity,function,1,750
PF02322,GO:0016020,membrane,component,541,64
PF02323,GO:0007275,multicellular organism development,process,19,194
PF02324,GO:0009250,glucan biosynthetic process,process,1,751
PF02325,GO:0016020,membrane,component,541,64
PF02327,GO:0015979,photosynthesis,process,41,135
PF02329,GO:0004398,histidine decarboxylase activity,function,1,752
PF02330,GO:0005759,mitochondrial matrix,component,2,753
PF02331,GO:0043027,cysteine-type endopeptidase inhibitor activity involved in apoptotic process,function,1,754
PF02332,GO:0006725,cellular aromatic compound metabolic process,process,6,324
PF02333,GO:0016158,3-phytase activity,function,1,755
PF02334,GO:0006274,DNA replication termination,process,2,756
PF02335,GO:0042279,"nitrite reductase (cytochrome, ammonia-forming) activity",function,1,757
PF02336,GO:0005198,structural molecule activity,function,90,30
PF02337,GO:0005198,structural molecule activity,function,90,30
PF02341,GO:0110102,ribulose bisphosphate carboxylase complex assembly,process,1,758
PF02344,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF02346,GO:0019064,fusion of virus membrane with host plasma membrane,process,9,215
PF02354,GO:0004930,G protein-coupled receptor activity,function,11,0
PF02357,GO:0140673,transcription elongation-coupled chromatin remodeling,process,1,759
PF02358,GO:0005992,trehalose biosynthetic process,process,2,362
PF02362,GO:0003677,DNA binding,function,320,19
PF02364,GO:0000148,"1,3-beta-D-glucan synthase complex",component,1,760
PF02365,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02366,GO:0006493,protein O-linked glycosylation,process,1,761
PF02367,GO:0002949,tRNA threonylcarbamoyladenosine modification,process,1,762
PF02371,GO:0004803,transposase activity,function,10,327
PF02372,GO:0005126,cytokine receptor binding,function,2,62
PF02376,GO:0003677,DNA binding,function,320,19
PF02378,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF02382,GO:0015267,channel activity,function,3,107
PF02383,GO:0016791,phosphatase activity,function,8,115
PF02384,GO:0006306,DNA methylation,process,2,550
PF02386,GO:0008324,monoatomic cation transmembrane transporter activity,function,5,548
PF02387,GO:0006276,plasmid maintenance,process,4,763
PF02388,GO:0016755,aminoacyltransferase activity,function,3,764
PF02390,GO:0008176,tRNA (guanine(46)-N7)-methyltransferase activity,function,1,765
PF02391,GO:0006777,Mo-molybdopterin cofactor biosynthetic process,process,4,649
PF02392,GO:0009579,thylakoid,component,2,102
PF02394,GO:0005149,interleukin-1 receptor binding,function,1,766
PF02395,GO:0004252,serine-type endopeptidase activity,function,29,35
PF02399,GO:0003688,DNA replication origin binding,function,2,716
PF02401,GO:0050992,dimethylallyl diphosphate biosynthetic process,process,1,767
PF02402,GO:0019835,cytolysis,process,1,768
PF02404,GO:0005173,stem cell factor receptor binding,function,1,769
PF02405,GO:0043190,ATP-binding cassette (ABC) transporter complex,component,4,350
PF02406,GO:0004497,monooxygenase activity,function,4,770
PF02407,GO:0016888,"endodeoxyribonuclease activity, producing 5'-phosphomonoesters",function,2,771
PF02411,GO:0015097,mercury ion transmembrane transporter activity,function,3,772
PF02412,GO:0007155,cell adhesion,process,28,363
PF02416,GO:0015031,protein transport,process,20,156
PF02417,GO:0015109,chromate transmembrane transporter activity,function,1,773
PF02419,GO:0009539,photosystem II reaction center,component,6,513
PF02421,GO:0005525,GTP binding,function,26,36
PF02422,GO:0005882,intermediate filament,component,2,774
PF02424,GO:0017013,protein flavinylation,process,1,775
PF02427,GO:0009538,photosystem I reaction center,component,5,776
PF02428,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF02429,GO:0030076,light-harvesting complex,component,1,777
PF02430,GO:0016020,membrane,component,541,64
PF02432,GO:0009289,pilus,component,8,46
PF02434,GO:0016757,glycosyltransferase activity,function,16,218
PF02435,GO:0009758,carbohydrate utilization,process,1,778
PF02438,GO:0039657,suppression by virus of host gene expression,process,1,779
PF02441,GO:0003824,catalytic activity,function,50,132
PF02443,GO:0019069,viral capsid assembly,process,9,744
PF02444,GO:0030430,host cell cytoplasm,component,5,542
PF02445,GO:0008987,quinolinate synthetase A activity,function,1,780
PF02446,GO:0004134,4-alpha-glucanotransferase activity,function,1,781
PF02447,GO:0015128,gluconate transmembrane transporter activity,function,1,782
PF02449,GO:0009341,beta-galactosidase complex,component,2,783
PF02450,GO:0008374,O-acyltransferase activity,function,2,784
PF02452,GO:0003677,DNA binding,function,320,19
PF02454,GO:0019048,modulation by virus of host process,process,6,745
PF02455,GO:0019028,viral capsid,component,65,138
PF02456,GO:0019073,viral DNA genome packaging,process,5,497
PF02459,GO:0006260,DNA replication,process,57,300
PF02460,GO:0016020,membrane,component,541,64
PF02462,GO:0015288,porin activity,function,8,475
PF02465,GO:0009424,bacterial-type flagellum hook,component,1,785
PF02468,GO:0015979,photosynthesis,process,41,135
PF02472,GO:0022857,transmembrane transporter activity,function,25,34
PF02474,GO:0005829,cytosol,component,1,786
PF02477,GO:0019013,viral nucleocapsid,component,17,317
PF02478,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF02479,GO:0010468,regulation of gene expression,process,3,787
PF02481,GO:0009294,DNA-mediated transformation,process,1,788
PF02482,GO:0044238,primary metabolic process,process,1,789
PF02485,GO:0016757,glycosyltransferase activity,function,16,218
PF02487,GO:0016020,membrane,component,541,64
PF02491,GO:0051301,cell division,process,9,395
PF02497,GO:0019031,viral envelope,component,33,212
PF02499,GO:0051276,chromosome organization,process,9,606
PF02500,GO:0051276,chromosome organization,process,9,606
PF02501,GO:0015628,protein secretion by the type II secretion system,process,5,434
PF02502,GO:0016853,isomerase activity,function,9,454
PF02504,GO:0006633,fatty acid biosynthetic process,process,8,790
PF02505,GO:0015948,methanogenesis,process,11,791
PF02507,GO:0009538,photosystem I reaction center,component,5,776
PF02508,GO:0016020,membrane,component,541,64
PF02509,GO:0004550,nucleoside diphosphate kinase activity,function,1,792
PF02511,GO:0006231,dTMP biosynthetic process,process,1,793
PF02513,GO:0007276,gamete generation,process,2,794
PF02514,GO:0009058,biosynthetic process,process,18,202
PF02515,GO:0003824,catalytic activity,function,50,132
PF02516,GO:0016020,membrane,component,541,64
PF02517,GO:0071586,CAAX-box protein processing,process,1,795
PF02519,GO:0009733,response to auxin,process,1,796
PF02522,GO:0046353,aminoglycoside 3-N-acetyltransferase activity,function,1,797
PF02527,GO:0008649,rRNA methyltransferase activity,function,3,798
PF02529,GO:0009512,cytochrome b6f complex,component,4,799
PF02530,GO:0015288,porin activity,function,8,475
PF02531,GO:0009538,photosystem I reaction center,component,5,776
PF02532,GO:0009539,photosystem II reaction center,component,6,513
PF02533,GO:0009539,photosystem II reaction center,component,6,513
PF02534,GO:0016020,membrane,component,541,64
PF02535,GO:0046873,metal ion transmembrane transporter activity,function,3,547
PF02536,GO:0003690,double-stranded DNA binding,function,5,127
PF02537,GO:0016020,membrane,component,541,64
PF02538,GO:0003824,catalytic activity,function,50,132
PF02542,GO:0008685,"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity",function,1,800
PF02543,GO:0009058,biosynthetic process,process,18,202
PF02544,GO:0016627,"oxidoreductase activity, acting on the CH-CH group of donors",function,6,191
PF02545,GO:0047429,nucleoside triphosphate diphosphatase activity,function,3,801
PF02547,GO:0016853,isomerase activity,function,9,454
PF02548,GO:0003864,3-methyl-2-oxobutanoate hydroxymethyltransferase activity,function,1,802
PF02550,GO:0008410,CoA-transferase activity,function,2,418
PF02552,GO:0019385,"methanogenesis, from acetate",process,1,803
PF02553,GO:0015087,cobalt ion transmembrane transporter activity,function,1,804
PF02554,GO:0009267,cellular response to starvation,process,2,805
PF02556,GO:0051262,protein tetramerization,process,3,806
PF02557,GO:0008233,peptidase activity,function,18,349
PF02560,GO:0009439,cyanate metabolic process,process,1,807
PF02561,GO:0044780,bacterial-type flagellum assembly,process,4,808
PF02562,GO:0005524,ATP binding,function,178,2
PF02565,GO:0006310,DNA recombination,process,25,386
PF02567,GO:0009058,biosynthetic process,process,18,202
PF02568,GO:0004810,CCA tRNA nucleotidyltransferase activity,function,2,809
PF02569,GO:0004592,pantoate-beta-alanine ligase activity,function,1,810
PF02570,GO:0016993,precorrin-8X methylmutase activity,function,1,811
PF02571,GO:0016994,precorrin-6A reductase activity,function,1,812
PF02572,GO:0008817,corrinoid adenosyltransferase activity,function,1,813
PF02575,GO:0003677,DNA binding,function,320,19
PF02577,GO:0004518,nuclease activity,function,9,288
PF02580,GO:0051499,D-aminoacyl-tRNA deacylase activity,function,2,814
PF02583,GO:0046872,metal ion binding,function,48,38
PF02586,GO:0018142,protein-DNA covalent cross-linking,process,3,815
PF02590,GO:0006364,rRNA processing,process,23,458
PF02592,GO:1990397,queuosine salvage,process,1,816
PF02595,GO:0031388,organic acid phosphorylation,process,1,817
PF02599,GO:0006109,regulation of carbohydrate metabolic process,process,3,818
PF02600,GO:0015035,protein-disulfide reductase activity,function,3,819
PF02601,GO:0008855,exodeoxyribonuclease VII activity,function,2,820
PF02602,GO:0004852,uroporphyrinogen-III synthase activity,function,1,821
PF02603,GO:0006109,regulation of carbohydrate metabolic process,process,3,818
PF02605,GO:0009538,photosystem I reaction center,component,5,776
PF02606,GO:0009029,tetraacyldisaccharide 4'-kinase activity,function,1,822
PF02608,GO:0005886,plasma membrane,component,39,823
PF02609,GO:0009318,exodeoxyribonuclease VII complex,component,1,824
PF02610,GO:0008733,L-arabinose isomerase activity,function,1,825
PF02611,GO:0008715,CDP-diacylglycerol diphosphatase activity,function,1,826
PF02614,GO:0008880,glucuronate isomerase activity,function,1,827
PF02615,GO:0016491,oxidoreductase activity,function,68,22
PF02617,GO:0030163,protein catabolic process,process,2,828
PF02623,GO:0044780,bacterial-type flagellum assembly,process,4,808
PF02627,GO:0051920,peroxiredoxin activity,function,2,829
PF02628,GO:0016653,"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor",function,1,830
PF02631,GO:0006282,regulation of DNA repair,process,2,831
PF02632,GO:0015878,biotin transport,process,1,832
PF02634,GO:0016783,sulfurtransferase activity,function,1,833
PF02637,GO:0016884,"carbon-nitrogen ligase activity, with glutamine as amido-N-donor",function,1,834
PF02649,GO:0003933,GTP cyclohydrolase activity,function,2,835
PF02652,GO:0015727,lactate transport,process,1,836
PF02653,GO:0022857,transmembrane transporter activity,function,25,34
PF02654,GO:0051073,adenosylcobinamide-GDP ribazoletransferase activity,function,1,837
PF02655,GO:0046872,metal ion binding,function,48,38
PF02660,GO:0043772,acyl-phosphate glycerol-3-phosphate acyltransferase activity,function,1,838
PF02664,GO:0043768,S-ribosylhomocysteine lyase activity,function,1,839
PF02666,GO:0004609,phosphatidylserine decarboxylase activity,function,1,840
PF02668,GO:0016491,oxidoreductase activity,function,68,22
PF02669,GO:0008556,P-type potassium transmembrane transporter activity,function,3,841
PF02670,GO:0070402,NADPH binding,function,1,842
PF02671,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02673,GO:0050380,undecaprenyl-diphosphatase activity,function,1,843
PF02674,GO:0009403,toxin biosynthetic process,process,1,844
PF02675,GO:0008295,spermidine biosynthetic process,process,1,845
PF02683,GO:0017004,cytochrome complex assembly,process,6,557
PF02684,GO:0008915,lipid-A-disaccharide synthase activity,function,2,846
PF02685,GO:0004340,glucokinase activity,function,1,847
PF02686,GO:0006450,regulation of translational fidelity,process,1,848
PF02687,GO:0016020,membrane,component,541,64
PF02689,GO:0004386,helicase activity,function,6,849
PF02690,GO:0044341,sodium-dependent phosphate transport,process,1,850
PF02691,GO:0005576,extracellular region,component,203,16
PF02694,GO:0016020,membrane,component,541,64
PF02701,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF02702,GO:0004673,protein histidine kinase activity,function,8,851
PF02703,GO:0019048,modulation by virus of host process,process,6,745
PF02705,GO:0015079,potassium ion transmembrane transporter activity,function,2,852
PF02706,GO:0016020,membrane,component,541,64
PF02710,GO:0046789,host cell surface receptor binding,function,6,184
PF02714,GO:0016020,membrane,component,541,64
PF02718,GO:0046802,exit of virus from host cell nucleus by nuclear egress,process,1,853
PF02723,GO:0046760,viral budding from Golgi membrane,process,1,854
PF02724,GO:0006270,DNA replication initiation,process,5,378
PF02727,GO:0008131,primary amine oxidase activity,function,3,430
PF02728,GO:0008131,primary amine oxidase activity,function,3,430
PF02729,GO:0016743,carboxyl- or carbamoyltransferase activity,function,3,855
PF02730,GO:0016625,"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor",function,2,477
PF02731,GO:0005681,spliceosomal complex,component,4,856
PF02732,GO:0004518,nuclease activity,function,9,288
PF02733,GO:0004371,glycerone kinase activity,function,2,857
PF02734,GO:0004371,glycerone kinase activity,function,2,857
PF02735,GO:0006303,double-strand break repair via nonhomologous end joining,process,5,858
PF02736,GO:0016459,myosin complex,component,4,24
PF02737,GO:0070403,NAD+ binding,function,3,700
PF02738,GO:0016491,oxidoreductase activity,function,68,22
PF02739,GO:0003677,DNA binding,function,320,19
PF02740,GO:0007586,digestion,process,2,403
PF02741,GO:0006730,one-carbon metabolic process,process,4,637
PF02742,GO:0046914,transition metal ion binding,function,4,859
PF02744,GO:0008108,UDP-glucose:hexose-1-phosphate uridylyltransferase activity,function,2,392
PF02745,GO:0050524,coenzyme-B sulfoethylthiotransferase activity,function,5,722
PF02747,GO:0006275,regulation of DNA replication,process,7,210
PF02749,GO:0016763,pentosyltransferase activity,function,3,586
PF02751,GO:0005672,transcription factor TFIIA complex,component,3,733
PF02761,GO:0005509,calcium ion binding,function,34,15
PF02765,GO:0000781,"chromosome, telomeric region",component,3,860
PF02767,GO:0009360,DNA polymerase III complex,component,5,271
PF02768,GO:0009360,DNA polymerase III complex,component,5,271
PF02770,GO:0016627,"oxidoreductase activity, acting on the CH-CH group of donors",function,6,191
PF02771,GO:0016627,"oxidoreductase activity, acting on the CH-CH group of donors",function,6,191
PF02772,GO:0006556,S-adenosylmethionine biosynthetic process,process,3,190
PF02773,GO:0006556,S-adenosylmethionine biosynthetic process,process,3,190
PF02774,GO:0008652,amino acid biosynthetic process,process,2,861
PF02775,GO:0030976,thiamine pyrophosphate binding,function,3,93
PF02776,GO:0030976,thiamine pyrophosphate binding,function,3,93
PF02777,GO:0006801,superoxide metabolic process,process,3,32
PF02778,GO:0000213,tRNA-intron endonuclease activity,function,2,650
PF02781,GO:0004345,glucose-6-phosphate dehydrogenase activity,function,1,862
PF02782,GO:0016301,kinase activity,function,13,169
PF02783,GO:0050524,coenzyme-B sulfoethylthiotransferase activity,function,5,722
PF02784,GO:0003824,catalytic activity,function,50,132
PF02786,GO:0005524,ATP binding,function,178,2
PF02788,GO:0016984,ribulose-bisphosphate carboxylase activity,function,2,9
PF02789,GO:0070006,metalloaminopeptidase activity,function,3,329
PF02790,GO:0022900,electron transport chain,process,6,863
PF02792,GO:0035145,exon-exon junction complex,component,2,864
PF02793,GO:0004930,G protein-coupled receptor activity,function,11,0
PF02794,GO:0009404,toxin metabolic process,process,1,865
PF02796,GO:0000150,DNA strand exchange activity,function,4,112
PF02799,GO:0004379,glycylpeptide N-tetradecanoyltransferase activity,function,2,447
PF02800,GO:0016620,"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor",function,3,406
PF02803,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF02805,GO:0006281,DNA repair,process,37,307
PF02806,GO:0043169,cation binding,function,1,866
PF02807,GO:0016772,"transferase activity, transferring phosphorus-containing groups",function,7,100
PF02811,GO:0003824,catalytic activity,function,50,132
PF02812,GO:0006520,amino acid metabolic process,process,8,94
PF02816,GO:0006468,protein phosphorylation,process,16,188
PF02817,GO:0016746,acyltransferase activity,function,9,88
PF02819,GO:0008200,ion channel inhibitor activity,function,7,197
PF02820,GO:0005634,nucleus,component,149,411
PF02821,GO:0031639,plasminogen activation,process,1,867
PF02822,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF02823,GO:0015986,proton motive force-driven ATP synthesis,process,18,145
PF02826,GO:0051287,NAD binding,function,13,18
PF02827,GO:0006469,negative regulation of protein kinase activity,process,1,868
PF02829,GO:0036094,small molecule binding,function,1,869
PF02831,GO:0019058,viral life cycle,process,14,186
PF02833,GO:0016462,pyrophosphatase activity,function,1,870
PF02836,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF02837,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF02839,GO:0030246,carbohydrate binding,function,20,59
PF02840,GO:0008380,RNA splicing,process,3,871
PF02841,GO:0003924,GTPase activity,function,10,3
PF02843,GO:0009113,purine nucleobase biosynthetic process,process,2,872
PF02844,GO:0009113,purine nucleobase biosynthetic process,process,2,872
PF02845,GO:0043130,ubiquitin binding,function,8,873
PF02854,GO:0003723,RNA binding,function,118,6
PF02862,GO:0046872,metal ion binding,function,48,38
PF02863,GO:0034618,arginine binding,function,1,874
PF02864,GO:0003677,DNA binding,function,320,19
PF02865,GO:0007165,signal transduction,process,34,8
PF02866,GO:0016616,"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",function,10,175
PF02868,GO:0004222,metalloendopeptidase activity,function,25,511
PF02870,GO:0003908,methylated-DNA-[protein]-cysteine S-methyltransferase activity,function,1,875
PF02872,GO:0009166,nucleotide catabolic process,process,1,876
PF02873,GO:0008762,UDP-N-acetylmuramate dehydrogenase activity,function,1,877
PF02874,GO:0046034,ATP metabolic process,process,1,878
PF02875,GO:0016881,acid-amino acid ligase activity,function,3,446
PF02876,GO:0005576,extracellular region,component,203,16
PF02877,GO:0003950,NAD+ ADP-ribosyltransferase activity,function,3,251
PF02878,GO:0016868,intramolecular phosphotransferase activity,function,3,879
PF02879,GO:0005975,carbohydrate metabolic process,process,70,55
PF02880,GO:0016868,intramolecular phosphotransferase activity,function,3,879
PF02881,GO:0006614,SRP-dependent cotranslational protein targeting to membrane,process,8,195
PF02882,GO:0004488,methylenetetrahydrofolate dehydrogenase (NADP+) activity,function,2,290
PF02883,GO:0016192,vesicle-mediated transport,process,22,249
PF02884,GO:0016829,lyase activity,function,20,268
PF02886,GO:0008289,lipid binding,function,11,449
PF02888,GO:0015269,calcium-activated potassium channel activity,function,2,880
PF02891,GO:0008270,zinc ion binding,function,101,229
PF02892,GO:0003677,DNA binding,function,320,19
PF02895,GO:0006935,chemotaxis,process,7,558
PF02896,GO:0016310,phosphorylation,process,6,177
PF02897,GO:0004252,serine-type endopeptidase activity,function,29,35
PF02898,GO:0006809,nitric oxide biosynthetic process,process,1,881
PF02899,GO:0015074,DNA integration,process,12,234
PF02900,GO:0008198,ferrous iron binding,function,1,882
PF02901,GO:0003824,catalytic activity,function,50,132
PF02902,GO:0008234,cysteine-type peptidase activity,function,9,45
PF02903,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF02905,GO:0006275,regulation of DNA replication,process,7,210
PF02907,GO:0019087,transformation of host cell by virus,process,2,883
PF02909,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF02910,GO:0016491,oxidoreductase activity,function,68,22
PF02911,GO:0009058,biosynthetic process,process,18,202
PF02912,GO:0004826,phenylalanine-tRNA ligase activity,function,2,885
PF02913,GO:0050660,flavin adenine dinucleotide binding,function,11,554
PF02914,GO:0004803,transposase activity,function,10,327
PF02915,GO:0046872,metal ion binding,function,48,38
PF02916,GO:0006260,DNA replication,process,57,300
PF02917,GO:0003950,NAD+ ADP-ribosyltransferase activity,function,3,251
PF02918,GO:0005576,extracellular region,component,203,16
PF02919,GO:0003917,"DNA topoisomerase type I (single strand cut, ATP-independent) activity",function,3,373
PF02920,GO:0008907,integrase activity,function,2,886
PF02921,GO:0008121,ubiquinol-cytochrome-c reductase activity,function,3,887
PF02922,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF02925,GO:0046797,viral procapsid maturation,process,1,888
PF02926,GO:0003723,RNA binding,function,118,6
PF02927,GO:0008810,cellulase activity,function,6,657
PF02929,GO:0009341,beta-galactosidase complex,component,2,783
PF02931,GO:0005230,extracellular ligand-gated monoatomic ion channel activity,function,1,889
PF02932,GO:0006811,monoatomic ion transport,process,6,890
PF02934,GO:0016874,ligase activity,function,1,891
PF02935,GO:0005751,mitochondrial respiratory chain complex IV,component,6,666
PF02936,GO:0006123,"mitochondrial electron transport, cytochrome c to oxygen",process,6,738
PF02939,GO:0006122,"mitochondrial electron transport, ubiquinol to cytochrome c",process,5,735
PF02940,GO:0004651,polynucleotide 5'-phosphatase activity,function,2,892
PF02941,GO:0015979,photosynthesis,process,41,135
PF02943,GO:0016730,"oxidoreductase activity, acting on iron-sulfur proteins as donors",function,1,893
PF02944,GO:0003677,DNA binding,function,320,19
PF02947,GO:0005125,cytokine activity,function,10,468
PF02948,GO:0062023,collagen-containing extracellular matrix,component,2,423
PF02949,GO:0007608,sensory perception of smell,process,2,894
PF02950,GO:0008200,ion channel inhibitor activity,function,7,197
PF02951,GO:0004363,glutathione synthase activity,function,4,895
PF02952,GO:0006004,fucose metabolic process,process,3,896
PF02954,GO:0043565,sequence-specific DNA binding,function,17,41
PF02955,GO:0004363,glutathione synthase activity,function,4,895
PF02959,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF02961,GO:0003677,DNA binding,function,320,19
PF02962,GO:0008704,5-carboxymethyl-2-hydroxymuconate delta-isomerase activity,function,1,897
PF02963,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF02964,GO:0015049,methane monooxygenase activity,function,1,899
PF02965,GO:0008705,methionine synthase activity,function,1,900
PF02966,GO:0046540,U4/U6 x U5 tri-snRNP complex,component,2,901
PF02970,GO:0007023,post-chaperonin tubulin folding pathway,process,1,902
PF02971,GO:0005542,folic acid binding,function,2,903
PF02972,GO:0030089,phycobilisome,component,5,187
PF02973,GO:0004308,exo-alpha-sialidase activity,function,2,25
PF02975,GO:0016638,"oxidoreductase activity, acting on the CH-NH2 group of donors",function,3,904
PF02976,GO:0004519,endonuclease activity,function,25,356
PF02978,GO:0048500,signal recognition particle,component,3,642
PF02979,GO:0046914,transition metal ion binding,function,4,859
PF02980,GO:0009307,DNA restriction-modification system,process,25,905
PF02981,GO:0009307,DNA restriction-modification system,process,25,905
PF02982,GO:0006582,melanin metabolic process,process,1,906
PF02983,GO:0008236,serine-type peptidase activity,function,7,33
PF02985,GO:0005515,protein binding,function,122,10
PF02988,GO:0004859,phospholipase inhibitor activity,function,1,907
PF02990,GO:0016020,membrane,component,541,64
PF02993,GO:0039664,lysis of host organelle involved in viral entry into host cell,process,1,908
PF03002,GO:0005179,hormone activity,function,28,21
PF03006,GO:0016020,membrane,component,541,64
PF03007,GO:0004144,diacylglycerol O-acyltransferase activity,function,1,909
PF03009,GO:0008081,phosphoric diester hydrolase activity,function,2,910
PF03012,GO:0019083,viral transcription,process,6,911
PF03014,GO:0005198,structural molecule activity,function,90,30
PF03026,GO:0019028,viral capsid,component,65,138
PF03028,GO:0008569,minus-end-directed microtubule motor activity,function,1,912
PF03030,GO:0009678,diphosphate hydrolysis-driven proton transmembrane transporter activity,function,1,913
PF03033,GO:0030259,lipid glycosylation,process,1,914
PF03034,GO:0106245,L-serine-phosphatidylethanolamine phosphatidyltransferase activity,function,1,915
PF03037,GO:0008284,positive regulation of cell population proliferation,process,3,916
PF03039,GO:0005143,interleukin-12 receptor binding,function,1,917
PF03040,GO:0016020,membrane,component,541,64
PF03041,GO:0019083,viral transcription,process,6,911
PF03047,GO:0005186,pheromone activity,function,3,918
PF03051,GO:0070005,cysteine-type aminopeptidase activity,function,1,919
PF03055,GO:0016702,"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen",function,5,144
PF03059,GO:0030418,nicotianamine biosynthetic process,process,1,920
PF03060,GO:0018580,nitronate monooxygenase activity,function,1,921
PF03063,GO:0016491,oxidoreductase activity,function,68,22
PF03065,GO:0003824,catalytic activity,function,50,132
PF03068,GO:0004668,protein-arginine deiminase activity,function,2,922
PF03069,GO:0016811,"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides",function,2,923
PF03071,GO:0008375,acetylglucosaminyltransferase activity,function,1,924
PF03073,GO:0016020,membrane,component,541,64
PF03074,GO:0004357,glutamate-cysteine ligase activity,function,3,925
PF03079,GO:0010309,acireductone dioxygenase [iron(II)-requiring] activity,function,1,926
PF03081,GO:0005546,"phosphatidylinositol-4,5-bisphosphate binding",function,1,927
PF03082,GO:0007618,mating,process,2,928
PF03083,GO:0016020,membrane,component,541,64
PF03087,GO:0048364,root development,process,1,929
PF03088,GO:0016844,strictosidine synthase activity,function,1,930
PF03089,GO:0006310,DNA recombination,process,25,386
PF03091,GO:0010038,response to metal ion,process,3,931
PF03094,GO:0006952,defense response,process,23,149
PF03095,GO:0019211,phosphatase activator activity,function,1,932
PF03099,GO:0036211,protein modification process,process,6,721
PF03100,GO:0017003,protein-heme linkage,process,1,933
PF03102,GO:0016051,carbohydrate biosynthetic process,process,3,934
PF03106,GO:0043565,sequence-specific DNA binding,function,17,41
PF03110,GO:0003677,DNA binding,function,320,19
PF03114,GO:0005737,cytoplasm,component,103,370
PF03116,GO:0055085,transmembrane transport,process,55,151
PF03117,GO:0019033,viral tegument,component,2,935
PF03118,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF03119,GO:0003911,DNA ligase (NAD+) activity,function,3,575
PF03120,GO:0003911,DNA ligase (NAD+) activity,function,3,575
PF03122,GO:0019028,viral capsid,component,65,138
PF03123,GO:0003723,RNA binding,function,118,6
PF03124,GO:0016020,membrane,component,541,64
PF03125,GO:0007606,sensory perception of chemical stimulus,process,4,693
PF03126,GO:0003677,DNA binding,function,320,19
PF03127,GO:0035091,phosphatidylinositol binding,function,3,296
PF03131,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03133,GO:0036211,protein modification process,process,6,721
PF03135,GO:0005524,ATP binding,function,178,2
PF03136,GO:0010498,proteasomal protein catabolic process,process,2,936
PF03137,GO:0055085,transmembrane transport,process,55,151
PF03139,GO:0016163,nitrogenase activity,function,1,937
PF03141,GO:0008168,methyltransferase activity,function,37,63
PF03144,GO:0005525,GTP binding,function,26,36
PF03145,GO:0006511,ubiquitin-dependent protein catabolic process,process,9,526
PF03146,GO:0043236,laminin binding,function,1,938
PF03150,GO:0016491,oxidoreductase activity,function,68,22
PF03152,GO:0006511,ubiquitin-dependent protein catabolic process,process,9,526
PF03153,GO:0005672,transcription factor TFIIA complex,component,3,733
PF03155,GO:0016758,hexosyltransferase activity,function,8,605
PF03157,GO:0045735,nutrient reservoir activity,function,3,552
PF03159,GO:0004527,exonuclease activity,function,1,939
PF03160,GO:0007154,cell communication,process,4,518
PF03161,GO:0004519,endonuclease activity,function,25,356
PF03165,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03166,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03169,GO:0035673,oligopeptide transmembrane transporter activity,function,1,940
PF03170,GO:0006011,UDP-glucose metabolic process,process,1,941
PF03172,GO:0005634,nucleus,component,149,411
PF03175,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF03176,GO:0016020,membrane,component,541,64
PF03178,GO:0003676,nucleic acid binding,function,32,39
PF03179,GO:0016471,vacuolar proton-transporting V-type ATPase complex,component,1,942
PF03184,GO:0003676,nucleic acid binding,function,32,39
PF03185,GO:0015269,calcium-activated potassium channel activity,function,2,880
PF03186,GO:0048472,threonine-phosphate decarboxylase activity,function,1,943
PF03189,GO:0015252,proton channel activity,function,2,944
PF03193,GO:0003924,GTPase activity,function,10,3
PF03194,GO:0006376,mRNA splice site recognition,process,1,945
PF03199,GO:0004363,glutathione synthase activity,function,4,895
PF03203,GO:0015694,mercury ion transport,process,3,946
PF03205,GO:0006777,Mo-molybdopterin cofactor biosynthetic process,process,4,649
PF03206,GO:0009399,nitrogen fixation,process,7,947
PF03211,GO:0030570,pectate lyase activity,function,2,948
PF03213,GO:0019031,viral envelope,component,33,212
PF03219,GO:0005471,ATP:ADP antiporter activity,function,1,949
PF03220,GO:0044423,virion component,component,16,368
PF03222,GO:0003333,amino acid transmembrane transport,process,1,950
PF03223,GO:0033180,"proton-transporting V-type ATPase, V1 domain",component,1,951
PF03224,GO:0000221,"vacuolar proton-transporting V-type ATPase, V1 domain",component,2,952
PF03227,GO:0016671,"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor",function,1,953
PF03228,GO:0019028,viral capsid,component,65,138
PF03234,GO:0019901,protein kinase binding,function,4,954
PF03239,GO:0033573,high-affinity iron permease complex,component,1,955
PF03243,GO:0018836,alkylmercury lyase activity,function,1,956
PF03244,GO:0009538,photosystem I reaction center,component,5,776
PF03245,GO:0044659,viral release from host cell by cytolysis,process,4,957
PF03246,GO:0019013,viral nucleocapsid,component,17,317
PF03248,GO:0016020,membrane,component,541,64
PF03249,GO:0016020,membrane,component,541,64
PF03250,GO:0005523,tropomyosin binding,function,1,958
PF03253,GO:0015204,urea transmembrane transporter activity,function,1,959
PF03254,GO:0008107,galactoside 2-alpha-L-fucosyltransferase activity,function,2,544
PF03255,GO:0009317,acetyl-CoA carboxylase complex,component,1,960
PF03260,GO:0005576,extracellular region,component,203,16
PF03261,GO:0016533,protein kinase 5 complex,component,1,961
PF03265,GO:0004531,deoxyribonuclease II activity,function,1,962
PF03266,GO:0017111,ribonucleoside triphosphate phosphatase activity,function,10,367
PF03271,GO:0008017,microtubule binding,function,17,712
PF03273,GO:0019048,modulation by virus of host process,process,6,745
PF03274,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF03275,GO:0008767,UDP-galactopyranose mutase activity,function,1,963
PF03276,GO:0044163,host cytoskeleton,component,1,964
PF03279,GO:0016740,transferase activity,function,18,291
PF03280,GO:0051082,unfolded protein binding,function,8,122
PF03283,GO:0016787,hydrolase activity,function,35,65
PF03284,GO:0017000,antibiotic biosynthetic process,process,3,613
PF03285,GO:0008360,regulation of cell shape,process,4,965
PF03286,GO:0019031,viral envelope,component,33,212
PF03287,GO:0016032,viral process,process,29,265
PF03293,GO:0019083,viral transcription,process,6,911
PF03294,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF03296,GO:1990817,poly(A) RNA polymerase activity,function,3,966
PF03298,GO:0005179,hormone activity,function,28,21
PF03300,GO:0046740,"transport of virus in host, cell to cell",process,6,303
PF03301,GO:0004833,"tryptophan 2,3-dioxygenase activity",function,1,967
PF03303,GO:0110134,meiotic drive,process,1,968
PF03306,GO:0047605,acetolactate decarboxylase activity,function,1,969
PF03307,GO:0019049,virus-mediated perturbation of host defense response,process,7,553
PF03309,GO:0004594,pantothenate kinase activity,function,2,970
PF03310,GO:0003677,DNA binding,function,320,19
PF03311,GO:0016192,vesicle-mediated transport,process,22,249
PF03315,GO:0003941,L-serine ammonia-lyase activity,function,1,971
PF03319,GO:0031469,bacterial microcompartment,component,2,347
PF03320,GO:0042132,"fructose 1,6-bisphosphate 1-phosphatase activity",function,2,972
PF03323,GO:0009847,spore germination,process,4,973
PF03324,GO:0019079,viral genome replication,process,13,283
PF03325,GO:0030337,DNA polymerase processivity factor activity,function,1,974
PF03326,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03327,GO:0019069,viral capsid assembly,process,9,744
PF03328,GO:0003824,catalytic activity,function,50,132
PF03331,GO:0008759,UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity,function,1,975
PF03332,GO:0009298,GDP-mannose biosynthetic process,process,1,976
PF03333,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03334,GO:0098662,inorganic cation transmembrane transport,process,1,977
PF03335,GO:0005198,structural molecule activity,function,90,30
PF03337,GO:0016032,viral process,process,29,265
PF03340,GO:0046677,response to antibiotic,process,10,978
PF03341,GO:0006370,7-methylguanosine mRNA capping,process,3,348
PF03343,GO:0000398,"mRNA splicing, via spliceosome",process,12,979
PF03345,GO:0018279,protein N-linked glycosylation via asparagine,process,1,980
PF03347,GO:0019836,hemolysis by symbiont of host erythrocytes,process,6,728
PF03348,GO:0016020,membrane,component,541,64
PF03352,GO:0008725,DNA-3-methyladenine glycosylase activity,function,1,981
PF03355,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03357,GO:0007034,vacuolar transport,process,2,982
PF03358,GO:0016491,oxidoreductase activity,function,68,22
PF03359,GO:0023052,signaling,process,1,983
PF03360,GO:0015018,galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,function,1,984
PF03361,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03362,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03366,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03367,GO:0008270,zinc ion binding,function,101,229
PF03368,GO:0016891,"RNA endonuclease activity, producing 5'-phosphomonoesters",function,1,985
PF03370,GO:0005515,protein binding,function,122,10
PF03372,GO:0003824,catalytic activity,function,50,132
PF03373,GO:0019865,immunoglobulin binding,function,2,715
PF03374,GO:0003677,DNA binding,function,320,19
PF03376,GO:0016020,membrane,component,541,64
PF03378,GO:0031267,small GTPase binding,function,7,986
PF03379,GO:0015232,heme transmembrane transporter activity,function,2,987
PF03381,GO:0016020,membrane,component,541,64
PF03387,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03388,GO:0016020,membrane,component,541,64
PF03390,GO:0015711,organic anion transport,process,1,988
PF03391,GO:0019028,viral capsid,component,65,138
PF03393,GO:0019068,virion assembly,process,8,256
PF03395,GO:0044423,virion component,component,16,368
PF03396,GO:0019083,viral transcription,process,6,911
PF03398,GO:0015031,protein transport,process,20,156
PF03400,GO:0004803,transposase activity,function,10,327
PF03402,GO:0016503,pheromone receptor activity,function,1,989
PF03404,GO:0030151,molybdenum ion binding,function,3,990
PF03405,GO:0045300,acyl-[acyl-carrier-protein] desaturase activity,function,1,991
PF03406,GO:0019062,virion attachment to host cell,process,5,221
PF03408,GO:0019031,viral envelope,component,33,212
PF03410,GO:0019058,viral life cycle,process,14,186
PF03411,GO:0030288,outer membrane-bounded periplasmic space,component,5,992
PF03412,GO:0008233,peptidase activity,function,18,349
PF03414,GO:0016758,hexosyltransferase activity,function,8,605
PF03416,GO:0019786,protein-phosphatidylethanolamide deconjugating activity,function,1,993
PF03418,GO:0009847,spore germination,process,4,973
PF03419,GO:0030436,asexual sporulation,process,6,994
PF03422,GO:0030246,carbohydrate binding,function,20,59
PF03423,GO:2001070,starch binding,function,4,263
PF03424,GO:0030245,cellulose catabolic process,process,4,488
PF03425,GO:0030245,cellulose catabolic process,process,4,488
PF03427,GO:0006032,chitin catabolic process,process,3,995
PF03431,GO:0039694,viral RNA genome replication,process,4,237
PF03444,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03445,GO:0008773,[protein-PII] uridylyltransferase activity,function,1,996
PF03446,GO:0050661,NADP binding,function,7,997
PF03447,GO:0050661,NADP binding,function,7,997
PF03449,GO:0032784,regulation of DNA-templated transcription elongation,process,2,460
PF03453,GO:0032324,molybdopterin cofactor biosynthetic process,process,2,998
PF03454,GO:0032324,molybdopterin cofactor biosynthetic process,process,2,998
PF03460,GO:0016491,oxidoreductase activity,function,68,22
PF03461,GO:0006281,DNA repair,process,37,307
PF03462,GO:0006415,translational termination,process,2,999
PF03468,GO:0031047,regulatory ncRNA-mediated gene silencing,process,3,1000
PF03470,GO:0031047,regulatory ncRNA-mediated gene silencing,process,3,1000
PF03473,GO:0030151,molybdenum ion binding,function,3,990
PF03480,GO:0055085,transmembrane transport,process,55,151
PF03483,GO:0004826,phenylalanine-tRNA ligase activity,function,2,885
PF03484,GO:0006432,phenylalanyl-tRNA aminoacylation,process,2,1001
PF03485,GO:0006420,arginyl-tRNA aminoacylation,process,2,1002
PF03488,GO:0005179,hormone activity,function,28,21
PF03491,GO:0005335,serotonin:sodium:chloride symporter activity,function,1,1003
PF03492,GO:0008168,methyltransferase activity,function,37,63
PF03493,GO:0006813,potassium ion transport,process,11,727
PF03494,GO:0016020,membrane,component,541,64
PF03496,GO:0005576,extracellular region,component,203,16
PF03497,GO:0008294,calcium- and calmodulin-responsive adenylate cyclase activity,function,1,1004
PF03500,GO:0030244,cellulose biosynthetic process,process,3,1005
PF03502,GO:0009279,cell outer membrane,component,13,308
PF03503,GO:0005201,extracellular matrix structural constituent,function,4,514
PF03504,GO:0005201,extracellular matrix structural constituent,function,4,514
PF03505,GO:0005576,extracellular region,component,203,16
PF03509,GO:0005922,connexin complex,component,1,1006
PF03510,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF03511,GO:0036297,interstrand cross-link repair,process,4,687
PF03512,GO:0009044,"xylan 1,4-beta-xylosidase activity",function,1,1007
PF03513,GO:0015643,toxic substance binding,function,6,479
PF03516,GO:0005198,structural molecule activity,function,90,30
PF03521,GO:0008076,voltage-gated potassium channel complex,component,1,1008
PF03522,GO:0006811,monoatomic ion transport,process,6,890
PF03523,GO:0006898,receptor-mediated endocytosis,process,1,1009
PF03525,GO:0007131,reciprocal meiotic recombination,process,5,1010
PF03526,GO:0015643,toxic substance binding,function,6,479
PF03528,GO:0005096,GTPase activator activity,function,9,516
PF03529,GO:0007275,multicellular organism development,process,19,194
PF03530,GO:0016286,small conductance calcium-activated potassium channel activity,function,1,1011
PF03533,GO:0007131,reciprocal meiotic recombination,process,5,1010
PF03534,GO:0005737,cytoplasm,component,103,370
PF03539,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF03540,GO:0006352,DNA-templated transcription initiation,process,13,162
PF03542,GO:0043547,positive regulation of GTPase activity,process,1,1012
PF03543,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF03544,GO:0055085,transmembrane transport,process,55,151
PF03547,GO:0055085,transmembrane transport,process,55,151
PF03549,GO:0005515,protein binding,function,122,10
PF03550,GO:0009279,cell outer membrane,component,13,308
PF03552,GO:0016760,cellulose synthase (UDP-forming) activity,function,1,1013
PF03553,GO:0016020,membrane,component,541,64
PF03557,GO:0019048,modulation by virus of host process,process,6,745
PF03558,GO:0019028,viral capsid,component,65,138
PF03559,GO:0016829,lyase activity,function,20,268
PF03561,GO:0004037,allantoicase activity,function,1,1014
PF03562,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF03567,GO:0008146,sulfotransferase activity,function,2,262
PF03572,GO:0008236,serine-type peptidase activity,function,7,33
PF03573,GO:0016020,membrane,component,541,64
PF03574,GO:0043158,heterocyst development,process,1,1015
PF03575,GO:0008236,serine-type peptidase activity,function,7,33
PF03577,GO:0070004,cysteine-type exopeptidase activity,function,1,1016
PF03581,GO:0019073,viral DNA genome packaging,process,5,497
PF03583,GO:0004806,triglyceride lipase activity,function,2,1017
PF03584,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF03585,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF03586,GO:0019784,deNEDDylase activity,function,1,1018
PF03587,GO:0070037,rRNA (pseudouridine) methyltransferase activity,function,1,1019
PF03588,GO:0008914,leucyl-tRNA--protein transferase activity,function,1,1020
PF03589,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03590,GO:0004071,aspartate-ammonia ligase activity,function,1,1021
PF03592,GO:0051276,chromosome organization,process,9,606
PF03594,GO:0042925,benzoate transmembrane transporter activity,function,1,1022
PF03595,GO:0055085,transmembrane transport,process,55,151
PF03598,GO:0018492,carbon-monoxide dehydrogenase (acceptor) activity,function,1,1023
PF03600,GO:0055085,transmembrane transport,process,55,151
PF03601,GO:0016020,membrane,component,541,64
PF03603,GO:0008408,3'-5' exonuclease activity,function,6,1024
PF03604,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF03605,GO:0015556,C4-dicarboxylate transmembrane transporter activity,function,1,1025
PF03606,GO:0016020,membrane,component,541,64
PF03607,GO:0035556,intracellular signal transduction,process,8,240
PF03608,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF03609,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF03610,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF03611,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF03612,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF03613,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF03614,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF03615,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03616,GO:0015501,glutamate:sodium symporter activity,function,1,1026
PF03618,GO:0016772,"transferase activity, transferring phosphorus-containing groups",function,7,100
PF03623,GO:0004713,protein tyrosine kinase activity,function,1,1027
PF03626,GO:0016020,membrane,component,541,64
PF03627,GO:0030246,carbohydrate binding,function,20,59
PF03630,GO:0004594,pantothenate kinase activity,function,2,970
PF03632,GO:0003824,catalytic activity,function,50,132
PF03635,GO:0030906,"retromer, cargo-selective complex",component,1,1028
PF03636,GO:0003824,catalytic activity,function,50,132
PF03643,GO:0006886,intracellular protein transport,process,31,1029
PF03644,GO:0033925,mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity,function,1,1030
PF03647,GO:0016020,membrane,component,541,64
PF03648,GO:0045493,xylan catabolic process,process,3,1031
PF03650,GO:0006850,mitochondrial pyruvate transmembrane transport,process,1,1032
PF03652,GO:0006364,rRNA processing,process,23,458
PF03659,GO:0051118,"glucan endo-1,3-alpha-glucosidase activity",function,1,1033
PF03660,GO:0000398,"mRNA splicing, via spliceosome",process,12,979
PF03661,GO:0016020,membrane,component,541,64
PF03662,GO:0016798,"hydrolase activity, acting on glycosyl bonds",function,3,659
PF03664,GO:0046373,L-arabinose metabolic process,process,3,1034
PF03665,GO:0072546,EMC complex,component,1,1035
PF03666,GO:0032007,negative regulation of TOR signaling,process,2,1036
PF03668,GO:0005524,ATP binding,function,178,2
PF03669,GO:0045048,protein insertion into ER membrane,process,2,1037
PF03671,GO:0071569,protein ufmylation,process,3,1038
PF03678,GO:0019028,viral capsid,component,65,138
PF03688,GO:0019028,viral capsid,component,65,138
PF03689,GO:0019028,viral capsid,component,65,138
PF03694,GO:0016020,membrane,component,541,64
PF03699,GO:0016020,membrane,component,541,64
PF03700,GO:0006886,intracellular protein transport,process,31,1029
PF03702,GO:0006040,amino sugar metabolic process,process,1,1039
PF03709,GO:0016831,carboxy-lyase activity,function,2,1040
PF03710,GO:0008882,[glutamate-ammonia-ligase] adenylyltransferase activity,function,1,1041
PF03711,GO:0003824,catalytic activity,function,50,132
PF03714,GO:0030246,carbohydrate binding,function,20,59
PF03717,GO:0008658,penicillin binding,function,2,336
PF03719,GO:0005840,ribosome,component,86,74
PF03720,GO:0016616,"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",function,10,175
PF03721,GO:0016616,"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",function,10,175
PF03726,GO:0006396,RNA processing,process,18,535
PF03727,GO:0016773,"phosphotransferase activity, alcohol group as acceptor",function,8,160
PF03728,GO:0006260,DNA replication,process,57,300
PF03730,GO:0006303,double-strand break repair via nonhomologous end joining,process,5,858
PF03734,GO:0016740,transferase activity,function,18,291
PF03739,GO:0016020,membrane,component,541,64
PF03740,GO:0033856,pyridoxine 5'-phosphate synthase activity,function,1,1042
PF03741,GO:0016020,membrane,component,541,64
PF03742,GO:0045158,"electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity",function,1,1043
PF03744,GO:0009102,biotin biosynthetic process,process,1,1044
PF03748,GO:0009425,bacterial-type flagellum basal body,component,2,703
PF03754,GO:0003677,DNA binding,function,320,19
PF03759,GO:0005085,guanyl-nucleotide exchange factor activity,function,8,244
PF03760,GO:0009793,embryo development ending in seed dormancy,process,1,1045
PF03764,GO:0005525,GTP binding,function,26,36
PF03768,GO:0005576,extracellular region,component,203,16
PF03769,GO:0042742,defense response to bacterium,process,23,591
PF03770,GO:0032958,inositol phosphate biosynthetic process,process,1,1046
PF03775,GO:0000902,cell morphogenesis,process,2,1047
PF03776,GO:0032955,regulation of division septum assembly,process,1,1048
PF03783,GO:0030288,outer membrane-bounded periplasmic space,component,5,992
PF03784,GO:0006952,defense response,process,23,149
PF03785,GO:0008233,peptidase activity,function,18,349
PF03786,GO:0008927,mannonate dehydratase activity,function,1,1049
PF03788,GO:0016020,membrane,component,541,64
PF03789,GO:0003677,DNA binding,function,320,19
PF03790,GO:0005634,nucleus,component,149,411
PF03791,GO:0005634,nucleus,component,149,411
PF03792,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF03796,GO:0003678,DNA helicase activity,function,8,213
PF03798,GO:0016020,membrane,component,541,64
PF03800,GO:0031262,Ndc80 complex,component,3,1050
PF03801,GO:0051315,attachment of mitotic spindle microtubules to kinetochore,process,1,1051
PF03802,GO:0051191,prosthetic group biosynthetic process,process,1,1052
PF03803,GO:0017121,plasma membrane phospholipid scrambling,process,1,1053
PF03805,GO:0020035,adhesion of symbiont to microvasculature,process,1,1054
PF03806,GO:1902604,p-aminobenzoyl-glutamate transmembrane transport,process,1,1055
PF03808,GO:0009058,biosynthetic process,process,18,202
PF03810,GO:0031267,small GTPase binding,function,7,986
PF03811,GO:0006313,DNA transposition,process,13,1056
PF03812,GO:0015649,2-keto-3-deoxygluconate:proton symporter activity,function,1,1057
PF03814,GO:0008556,P-type potassium transmembrane transporter activity,function,3,841
PF03817,GO:0016020,membrane,component,541,64
PF03820,GO:0015075,monoatomic ion transmembrane transporter activity,function,2,1058
PF03821,GO:0016020,membrane,component,541,64
PF03822,GO:0007165,signal transduction,process,34,8
PF03823,GO:0007217,tachykinin receptor signaling pathway,process,2,714
PF03824,GO:0015099,nickel cation transmembrane transporter activity,function,1,1059
PF03825,GO:0015858,nucleoside transport,process,1,1060
PF03827,GO:0016499,orexin receptor activity,function,1,1061
PF03829,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF03830,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF03832,GO:0005516,calmodulin binding,function,10,671
PF03836,GO:0005515,protein binding,function,122,10
PF03837,GO:0006259,DNA metabolic process,process,3,1062
PF03838,GO:0006281,DNA repair,process,37,307
PF03839,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF03840,GO:0015450,protein-transporting ATPase activity,function,1,1064
PF03842,GO:0015708,silicic acid import across plasma membrane,process,1,1065
PF03843,GO:0019867,outer membrane,component,22,397
PF03845,GO:0009847,spore germination,process,4,973
PF03846,GO:0051782,negative regulation of cell division,process,1,1066
PF03847,GO:0005669,transcription factor TFIID complex,component,3,1067
PF03849,GO:0001671,ATPase activator activity,function,3,1068
PF03850,GO:0000439,transcription factor TFIIH core complex,component,3,1069
PF03851,GO:0009411,response to UV,process,1,1070
PF03852,GO:0006298,mismatch repair,process,8,1071
PF03854,GO:0008270,zinc ion binding,function,101,229
PF03855,GO:0000772,mating pheromone activity,function,5,1072
PF03857,GO:0015643,toxic substance binding,function,6,479
PF03859,GO:0003677,DNA binding,function,320,19
PF03861,GO:0003723,RNA binding,function,118,6
PF03863,GO:0039666,virion attachment to host cell pilus,process,1,1073
PF03868,GO:0005840,ribosome,component,86,74
PF03869,GO:0003677,DNA binding,function,320,19
PF03870,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF03871,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF03872,GO:0016989,sigma factor antagonist activity,function,1,1074
PF03874,GO:0030880,RNA polymerase complex,component,1,1075
PF03875,GO:0030500,regulation of bone mineralization,process,1,1076
PF03876,GO:0006351,DNA-templated transcription,process,53,701
PF03878,GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport,process,7,1077
PF03884,GO:0008270,zinc ion binding,function,101,229
PF03889,GO:0072344,rescue of stalled ribosome,process,1,1078
PF03892,GO:0009061,anaerobic respiration,process,1,1079
PF03893,GO:0016042,lipid catabolic process,process,9,580
PF03894,GO:0016832,aldehyde-lyase activity,function,3,405
PF03896,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF03898,GO:0019028,viral capsid,component,65,138
PF03900,GO:0004418,hydroxymethylbilane synthase activity,function,2,503
PF03901,GO:0016757,glycosyltransferase activity,function,16,218
PF03907,GO:0019888,protein phosphatase regulator activity,function,3,1080
PF03908,GO:0005484,SNAP receptor activity,function,1,1081
PF03910,GO:0044423,virion component,component,16,368
PF03912,GO:0009654,photosystem II oxygen evolving complex,component,6,1082
PF03917,GO:0004363,glutathione synthase activity,function,4,895
PF03920,GO:0005515,protein binding,function,122,10
PF03922,GO:0019867,outer membrane,component,22,397
PF03925,GO:0003677,DNA binding,function,320,19
PF03930,GO:0006310,DNA recombination,process,25,386
PF03931,GO:0006511,ubiquitin-dependent protein catabolic process,process,9,526
PF03936,GO:0010333,terpene synthase activity,function,2,509
PF03938,GO:0051082,unfolded protein binding,function,8,122
PF03943,GO:0051028,mRNA transport,process,2,1083
PF03944,GO:0090729,toxin activity,function,13,410
PF03945,GO:0001907,killing by symbiont of host cells,process,2,1084
PF03947,GO:0005840,ribosome,component,86,74
PF03949,GO:0051287,NAD binding,function,13,18
PF03950,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF03951,GO:0006542,glutamine biosynthetic process,process,2,1085
PF03955,GO:0031423,hexon binding,function,2,476
PF03956,GO:0015661,L-lysine efflux transmembrane transporter activity,function,1,1086
PF03964,GO:0042600,egg chorion,component,6,1087
PF03965,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF03967,GO:0045156,"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity",function,3,1088
PF03969,GO:0016887,ATP hydrolysis activity,function,15,1
PF03970,GO:0019068,virion assembly,process,8,256
PF03971,GO:0004450,isocitrate dehydrogenase (NADP+) activity,function,1,1089
PF03973,GO:0030682,perturbation of host defenses by symbiont,process,2,1090
PF03974,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF03975,GO:0050568,protein-glutamine glutaminase activity,function,1,1091
PF03977,GO:0006814,sodium ion transport,process,11,1092
PF03979,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF03980,GO:0000444,MIS12/MIND type complex,component,2,1093
PF03982,GO:0008374,O-acyltransferase activity,function,2,784
PF03983,GO:0030674,protein-macromolecule adaptor activity,function,2,1094
PF03985,GO:0016593,Cdc73/Paf1 complex,component,2,1095
PF03987,GO:0019787,ubiquitin-like protein transferase activity,function,1,1096
PF03989,GO:0003916,DNA topoisomerase activity,function,5,415
PF03996,GO:0046789,host cell surface receptor binding,function,6,184
PF03997,GO:0032509,endosome transport via multivesicular body sorting pathway,process,2,1097
PF03998,GO:0032040,small-subunit processome,component,5,1098
PF04004,GO:0016593,Cdc73/Paf1 complex,component,2,1095
PF04005,GO:0030896,checkpoint clamp complex,component,2,1099
PF04006,GO:0034457,Mpp10 complex,component,1,1100
PF04013,GO:0008175,tRNA methyltransferase activity,function,2,1101
PF04014,GO:0003677,DNA binding,function,320,19
PF04019,GO:0015937,coenzyme A biosynthetic process,process,3,1102
PF04023,GO:0046914,transition metal ion binding,function,4,859
PF04026,GO:0030435,sporulation resulting in formation of a cellular spore,process,4,1103
PF04029,GO:0050532,2-phosphosulfolactate phosphatase activity,function,1,1104
PF04030,GO:0003885,"D-arabinono-1,4-lactone oxidase activity",function,1,1105
PF04031,GO:0090730,Las1 complex,component,1,1106
PF04032,GO:0006396,RNA processing,process,18,535
PF04037,GO:0005634,nucleus,component,149,411
PF04042,GO:0006260,DNA replication,process,57,300
PF04043,GO:0004857,enzyme inhibitor activity,function,3,1107
PF04045,GO:0015629,actin cytoskeleton,component,3,1108
PF04048,GO:0006904,vesicle docking involved in exocytosis,process,1,1109
PF04049,GO:0005680,anaphase-promoting complex,component,8,1110
PF04052,GO:0042597,periplasmic space,component,13,1111
PF04053,GO:0030117,membrane coat,component,2,562
PF04055,GO:0051536,iron-sulfur cluster binding,function,15,44
PF04057,GO:0006260,DNA replication,process,57,300
PF04060,GO:0051536,iron-sulfur cluster binding,function,15,44
PF04061,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF04062,GO:0005885,Arp2/3 protein complex,component,4,1112
PF04065,GO:0005634,nucleus,component,149,411
PF04066,GO:0015075,monoatomic ion transmembrane transporter activity,function,2,1058
PF04069,GO:0043190,ATP-binding cassette (ABC) transporter complex,component,4,350
PF04072,GO:0032259,methylation,process,3,594
PF04073,GO:0002161,aminoacyl-tRNA editing activity,function,3,1113
PF04075,GO:0016491,oxidoreductase activity,function,68,22
PF04077,GO:0002143,tRNA wobble position uridine thiolation,process,1,1114
PF04078,GO:0030014,CCR4-NOT complex,component,2,1115
PF04079,GO:0051304,chromosome separation,process,1,1116
PF04080,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF04081,GO:0000731,DNA synthesis involved in DNA repair,process,1,1118
PF04082,GO:0006351,DNA-templated transcription,process,53,701
PF04083,GO:0006629,lipid metabolic process,process,14,204
PF04084,GO:0000808,origin recognition complex,component,1,1119
PF04085,GO:0008360,regulation of cell shape,process,4,965
PF04086,GO:0005785,signal recognition particle receptor complex,component,1,1120
PF04088,GO:0016560,"protein import into peroxisome matrix, docking",process,1,1121
PF04090,GO:0001164,RNA polymerase I core promoter sequence-specific DNA binding,function,1,1122
PF04092,GO:0016020,membrane,component,541,64
PF04093,GO:0008360,regulation of cell shape,process,4,965
PF04096,GO:0006913,nucleocytoplasmic transport,process,1,1123
PF04097,GO:0017056,structural constituent of nuclear pore,function,4,1124
PF04099,GO:0030008,TRAPP complex,component,1,1125
PF04101,GO:0016758,hexosyltransferase activity,function,8,605
PF04103,GO:0016020,membrane,component,541,64
PF04104,GO:0006269,"DNA replication, synthesis of RNA primer",process,4,635
PF04107,GO:0042398,cellular modified amino acid biosynthetic process,process,1,1126
PF04109,GO:0006914,autophagy,process,5,1127
PF04110,GO:0000045,autophagosome assembly,process,1,1128
PF04112,GO:0031417,NatC complex,component,1,1129
PF04113,GO:0016255,attachment of GPI anchor to protein,process,2,1130
PF04114,GO:0042765,GPI-anchor transamidase complex,component,3,1131
PF04115,GO:0050385,ureidoglycolate lyase activity,function,1,1132
PF04116,GO:0008610,lipid biosynthetic process,process,2,1133
PF04117,GO:0016020,membrane,component,541,64
PF04120,GO:0055085,transmembrane transport,process,55,151
PF04121,GO:0017056,structural constituent of nuclear pore,function,4,1124
PF04124,GO:0017119,Golgi transport complex,component,2,1134
PF04130,GO:0043015,gamma-tubulin binding,function,2,1135
PF04131,GO:0047465,N-acylglucosamine-6-phosphate 2-epimerase activity,function,1,1136
PF04134,GO:0015035,protein-disulfide reductase activity,function,3,819
PF04135,GO:0030515,snoRNA binding,function,3,1137
PF04137,GO:0034975,protein folding in endoplasmic reticulum,process,1,1138
PF04138,GO:0000271,polysaccharide biosynthetic process,process,2,1139
PF04139,GO:0030896,checkpoint clamp complex,component,2,1099
PF04140,GO:0006481,C-terminal protein methylation,process,1,1140
PF04142,GO:0015165,pyrimidine nucleotide-sugar transmembrane transporter activity,function,1,1141
PF04144,GO:0015031,protein transport,process,20,156
PF04145,GO:0035434,copper ion transmembrane transport,process,1,1142
PF04146,GO:0003723,RNA binding,function,118,6
PF04147,GO:0032040,small-subunit processome,component,5,1098
PF04148,GO:0097020,COPII receptor activity,function,1,1143
PF04152,GO:0006302,double-strand break repair,process,5,1144
PF04153,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF04159,GO:0016020,membrane,component,541,64
PF04161,GO:0032366,intracellular sterol transport,process,1,1145
PF04162,GO:0019028,viral capsid,component,65,138
PF04163,GO:0000742,karyogamy involved in conjugation with cellular fusion,process,1,1146
PF04166,GO:0051287,NAD binding,function,13,18
PF04176,GO:0043666,regulation of phosphoprotein phosphatase activity,process,3,1147
PF04177,GO:0009966,regulation of signal transduction,process,6,1148
PF04178,GO:0016192,vesicle-mediated transport,process,22,249
PF04180,GO:0042274,ribosomal small subunit biogenesis,process,2,1149
PF04183,GO:0019290,siderophore biosynthetic process,process,1,1150
PF04185,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF04186,GO:0016020,membrane,component,541,64
PF04188,GO:0000009,"alpha-1,6-mannosyltransferase activity",function,1,1151
PF04189,GO:0031515,tRNA (m1A) methyltransferase complex,component,1,1152
PF04190,GO:0045048,protein insertion into ER membrane,process,2,1037
PF04192,GO:0032040,small-subunit processome,component,5,1098
PF04194,GO:0005737,cytoplasm,component,103,370
PF04196,GO:0019079,viral genome replication,process,13,283
PF04197,GO:0019079,viral genome replication,process,13,283
PF04198,GO:0030246,carbohydrate binding,function,20,59
PF04199,GO:0004061,arylformamidase activity,function,1,1153
PF04205,GO:0010181,FMN binding,function,8,120
PF04206,GO:0012506,vesicle membrane,component,3,284
PF04207,GO:0012506,vesicle membrane,component,3,284
PF04210,GO:0030269,tetrahydromethanopterin S-methyltransferase activity,function,6,1154
PF04211,GO:0030269,tetrahydromethanopterin S-methyltransferase activity,function,6,1154
PF04216,GO:0005737,cytoplasm,component,103,370
PF04218,GO:0003677,DNA binding,function,320,19
PF04220,GO:0005096,GTPase activator activity,function,9,516
PF04223,GO:0009346,ATP-independent citrate lyase complex,component,1,1155
PF04225,GO:0042834,peptidoglycan binding,function,2,1156
PF04226,GO:0016020,membrane,component,541,64
PF04227,GO:0004730,pseudouridylate synthase activity,function,1,1157
PF04231,GO:0004518,nuclease activity,function,9,288
PF04234,GO:0046688,response to copper ion,process,1,1158
PF04245,GO:0009295,nucleoid,component,2,1159
PF04252,GO:0008168,methyltransferase activity,function,37,63
PF04258,GO:0042500,"aspartic endopeptidase activity, intramembrane cleaving",function,2,1160
PF04259,GO:0030435,sporulation resulting in formation of a cellular spore,process,4,1103
PF04262,GO:0004357,glutamate-cysteine ligase activity,function,3,925
PF04263,GO:0004788,thiamine diphosphokinase activity,function,1,1161
PF04265,GO:0030975,thiamine binding,function,1,1162
PF04267,GO:0008115,sarcosine oxidase activity,function,1,1163
PF04272,GO:1901894,regulation of ATPase-coupled calcium transmembrane transporter activity,process,1,1164
PF04273,GO:0016787,hydrolase activity,function,35,65
PF04275,GO:0006695,cholesterol biosynthetic process,process,1,1165
PF04277,GO:0015081,sodium ion transmembrane transporter activity,function,1,1166
PF04278,GO:0015031,protein transport,process,20,156
PF04279,GO:0016020,membrane,component,541,64
PF04281,GO:0005741,mitochondrial outer membrane,component,4,525
PF04283,GO:0006935,chemotaxis,process,7,558
PF04288,GO:0030261,chromosome condensation,process,3,1167
PF04295,GO:0016829,lyase activity,function,20,268
PF04309,GO:0006071,glycerol metabolic process,process,4,1168
PF04310,GO:0009295,nucleoid,component,2,1159
PF04313,GO:0006304,DNA modification,process,3,1169
PF04319,GO:0009399,nitrogen fixation,process,7,947
PF04333,GO:0016020,membrane,component,541,64
PF04335,GO:0016020,membrane,component,541,64
PF04336,GO:0008770,[acyl-carrier-protein] phosphodiesterase activity,function,1,1170
PF04344,GO:0050920,regulation of chemotaxis,process,1,1171
PF04345,GO:0008813,chorismate lyase activity,function,1,1172
PF04346,GO:0034229,ethanolamine transport,process,1,1173
PF04347,GO:0044781,bacterial-type flagellum organization,process,3,1174
PF04349,GO:0016051,carbohydrate biosynthetic process,process,3,934
PF04350,GO:0043107,type IV pilus-dependent motility,process,1,1175
PF04353,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF04354,GO:0090529,cell septum assembly,process,3,1176
PF04355,GO:0019867,outer membrane,component,22,397
PF04357,GO:0009306,protein secretion,process,11,123
PF04362,GO:0005506,iron ion binding,function,22,142
PF04364,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF04369,GO:0042742,defense response to bacterium,process,23,591
PF04371,GO:0009446,putrescine biosynthetic process,process,1,1177
PF04376,GO:0004057,arginyl-tRNA--protein transferase activity,function,2,1178
PF04377,GO:0016598,protein arginylation,process,2,1179
PF04378,GO:0070475,rRNA base methylation,process,3,1180
PF04381,GO:0006310,DNA recombination,process,25,386
PF04382,GO:0030866,cortical actin cytoskeleton organization,process,1,1181
PF04384,GO:0016226,iron-sulfur cluster assembly,process,5,398
PF04390,GO:0043165,Gram-negative-bacterium-type cell outer membrane assembly,process,1,1182
PF04397,GO:0003677,DNA binding,function,320,19
PF04406,GO:0006259,DNA metabolic process,process,3,1062
PF04410,GO:0042254,ribosome biogenesis,process,7,1183
PF04414,GO:0051499,D-aminoacyl-tRNA deacylase activity,function,2,814
PF04418,GO:0061617,MICOS complex,component,4,1184
PF04420,GO:0071816,tail-anchored membrane protein insertion into ER membrane,process,1,1185
PF04421,GO:0007264,small GTPase mediated signal transduction,process,3,242
PF04424,GO:1990380,K48-linked deubiquitinase activity,function,1,1186
PF04427,GO:0019843,rRNA binding,function,6,73
PF04428,GO:0016773,"phosphotransferase activity, alcohol group as acceptor",function,8,160
PF04431,GO:0030570,pectate lyase activity,function,2,948
PF04433,GO:0005515,protein binding,function,122,10
PF04434,GO:0008270,zinc ion binding,function,101,229
PF04437,GO:0070939,Dsl1/NZR complex,component,1,1187
PF04440,GO:0005737,cytoplasm,component,103,370
PF04441,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF04442,GO:0005507,copper ion binding,function,17,54
PF04443,GO:0047474,long-chain fatty acid luciferin component ligase activity,function,1,1188
PF04444,GO:0018576,"catechol 1,2-dioxygenase activity",function,1,1189
PF04445,GO:0031167,rRNA methylation,process,1,1190
PF04446,GO:0008193,tRNA guanylyltransferase activity,function,1,1191
PF04449,GO:0009289,pilus,component,8,46
PF04451,GO:0005198,structural molecule activity,function,90,30
PF04453,GO:0010033,response to organic substance,process,1,1192
PF04464,GO:0047355,CDP-glycerol glycerophosphotransferase activity,function,1,1193
PF04471,GO:0004519,endonuclease activity,function,25,356
PF04472,GO:0090529,cell septum assembly,process,3,1176
PF04479,GO:0016020,membrane,component,541,64
PF04487,GO:0005634,nucleus,component,149,411
PF04492,GO:0006260,DNA replication,process,57,300
PF04493,GO:0004519,endonuclease activity,function,25,356
PF04496,GO:0019028,viral capsid,component,65,138
PF04498,GO:0019028,viral capsid,component,65,138
PF04499,GO:0019903,protein phosphatase binding,function,1,1194
PF04501,GO:0019028,viral capsid,component,65,138
PF04502,GO:0000398,"mRNA splicing, via spliceosome",process,12,979
PF04504,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF04505,GO:0016020,membrane,component,541,64
PF04506,GO:0006488,dolichol-linked oligosaccharide biosynthetic process,process,3,1195
PF04508,GO:0016032,viral process,process,29,265
PF04509,GO:0016787,hydrolase activity,function,35,65
PF04512,GO:0019031,viral envelope,component,33,212
PF04513,GO:0019031,viral envelope,component,33,212
PF04514,GO:0003723,RNA binding,function,118,6
PF04515,GO:0022857,transmembrane transporter activity,function,25,34
PF04517,GO:0019054,modulation by virus of host cellular process,process,1,1196
PF04522,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF04523,GO:0019068,virion assembly,process,8,256
PF04537,GO:0019058,viral life cycle,process,14,186
PF04539,GO:0006352,DNA-templated transcription initiation,process,13,162
PF04542,GO:0006352,DNA-templated transcription initiation,process,13,162
PF04544,GO:0019058,viral life cycle,process,14,186
PF04545,GO:0006352,DNA-templated transcription initiation,process,13,162
PF04546,GO:0016987,sigma factor activity,function,5,60
PF04548,GO:0005525,GTP binding,function,26,36
PF04550,GO:0044660,viral release via pore formation in host cell membrane,process,1,1197
PF04551,GO:0046429,4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity,function,1,1198
PF04552,GO:0001216,DNA-binding transcription activator activity,function,2,146
PF04554,GO:0009664,plant-type cell wall organization,process,1,1199
PF04555,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF04556,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF04557,GO:0006425,glutaminyl-tRNA aminoacylation,process,1,1200
PF04558,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF04559,GO:0051276,chromosome organization,process,9,606
PF04560,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04561,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04563,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04564,GO:0004842,ubiquitin-protein transferase activity,function,8,247
PF04565,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04566,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04567,GO:0006351,DNA-templated transcription,process,53,701
PF04568,GO:0032780,negative regulation of ATP-dependent activity,process,1,1201
PF04573,GO:0005787,signal peptidase complex,component,3,1202
PF04575,GO:0009279,cell outer membrane,component,13,308
PF04577,GO:0016757,glycosyltransferase activity,function,16,218
PF04579,GO:0045095,keratin filament,component,3,532
PF04583,GO:0019058,viral life cycle,process,14,186
PF04584,GO:0016032,viral process,process,29,265
PF04587,GO:0016773,"phosphotransferase activity, alcohol group as acceptor",function,8,160
PF04589,GO:0005634,nucleus,component,149,411
PF04595,GO:0016032,viral process,process,29,265
PF04597,GO:0006486,protein glycosylation,process,9,1203
PF04602,GO:0071766,Actinobacterium-type cell wall biogenesis,process,1,1204
PF04604,GO:0042742,defense response to bacterium,process,23,591
PF04607,GO:0015969,guanosine tetraphosphate metabolic process,process,1,1205
PF04608,GO:0008962,phosphatidylglycerophosphatase activity,function,2,1206
PF04610,GO:0030255,protein secretion by the type IV secretion system,process,1,1207
PF04611,GO:0019953,sexual reproduction,process,3,1208
PF04612,GO:0015628,protein secretion by the type II secretion system,process,5,434
PF04613,GO:0009245,lipid A biosynthetic process,process,5,1209
PF04614,GO:0005777,peroxisome,component,4,1210
PF04616,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF04617,GO:0006351,DNA-templated transcription,process,53,701
PF04618,GO:0005634,nucleus,component,149,411
PF04620,GO:0030288,outer membrane-bounded periplasmic space,component,5,992
PF04621,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF04624,GO:0007304,chorion-containing eggshell formation,process,4,1211
PF04625,GO:0005213,structural constituent of egg chorion,function,4,592
PF04626,GO:0007304,chorion-containing eggshell formation,process,4,1211
PF04627,GO:0000275,"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)",component,2,1212
PF04628,GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport,process,7,1077
PF04632,GO:0022857,transmembrane transporter activity,function,25,34
PF04636,GO:1901031,regulation of response to reactive oxygen species,process,1,1213
PF04639,GO:0019031,viral envelope,component,33,212
PF04643,GO:0005179,hormone activity,function,28,21
PF04644,GO:0005179,hormone activity,function,28,21
PF04647,GO:0009372,quorum sensing,process,5,1214
PF04648,GO:0019953,sexual reproduction,process,3,1208
PF04655,GO:0019748,secondary metabolic process,process,1,1215
PF04658,GO:0005669,transcription factor TFIID complex,component,3,1067
PF04659,GO:0097588,archaeal or bacterial-type flagellum-dependent cell motility,process,2,639
PF04661,GO:0003697,single-stranded DNA binding,function,14,189
PF04662,GO:0016032,viral process,process,29,265
PF04663,GO:0018662,phenol 2-monooxygenase activity,function,1,1216
PF04664,GO:0038023,signaling receptor activity,function,8,1217
PF04670,GO:0005525,GTP binding,function,26,36
PF04673,GO:0030639,polyketide biosynthetic process,process,1,1218
PF04675,GO:0003910,DNA ligase (ATP) activity,function,4,383
PF04679,GO:0003910,DNA ligase (ATP) activity,function,4,383
PF04684,GO:0006338,chromatin remodeling,process,11,1219
PF04685,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF04686,GO:0051301,cell division,process,9,395
PF04687,GO:0046718,viral entry into host cell,process,6,538
PF04689,GO:0005634,nucleus,component,149,411
PF04690,GO:0007275,multicellular organism development,process,19,194
PF04691,GO:0042157,lipoprotein metabolic process,process,5,523
PF04692,GO:0008083,growth factor activity,function,17,11
PF04699,GO:0015629,actin cytoskeleton,component,3,1108
PF04700,GO:0044423,virion component,component,16,368
PF04703,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF04704,GO:0046872,metal ion binding,function,48,38
PF04705,GO:0008649,rRNA methyltransferase activity,function,3,798
PF04706,GO:0030178,negative regulation of Wnt signaling pathway,process,1,1220
PF04709,GO:0008406,gonad development,process,1,1221
PF04710,GO:0005515,protein binding,function,122,10
PF04711,GO:0042157,lipoprotein metabolic process,process,5,523
PF04712,GO:0001534,radial spoke,component,1,1222
PF04715,GO:0009058,biosynthetic process,process,18,202
PF04716,GO:0022904,respiratory electron transport chain,process,1,1223
PF04718,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF04719,GO:0006367,transcription initiation at RNA polymerase II promoter,process,9,711
PF04721,GO:0006516,glycoprotein catabolic process,process,1,1224
PF04722,GO:0004721,phosphoprotein phosphatase activity,function,5,1225
PF04723,GO:0030700,glycine reductase complex,component,1,1226
PF04724,GO:0003830,"beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity",function,1,1227
PF04725,GO:0042651,thylakoid membrane,component,3,485
PF04726,GO:0003677,DNA binding,function,320,19
PF04728,GO:0019867,outer membrane,component,22,397
PF04729,GO:0006325,chromatin organization,process,2,1228
PF04731,GO:0007275,multicellular organism development,process,19,194
PF04732,GO:0005882,intermediate filament,component,2,774
PF04735,GO:0003678,DNA helicase activity,function,8,213
PF04736,GO:0018990,"ecdysis, chitin-based cuticle",process,1,1229
PF04739,GO:0005515,protein binding,function,122,10
PF04750,GO:0016020,membrane,component,541,64
PF04752,GO:0061928,glutathione specific gamma-glutamylcyclotransferase activity,function,1,1230
PF04758,GO:0005840,ribosome,component,86,74
PF04759,GO:0010274,hydrotropism,process,1,1231
PF04762,GO:0033588,elongator holoenzyme complex,component,4,1232
PF04766,GO:0004518,nuclease activity,function,9,288
PF04767,GO:0019082,viral protein processing,process,7,1233
PF04769,GO:0007531,mating type determination,process,1,1234
PF04771,GO:0019051,induction by virus of host apoptotic process,process,1,1235
PF04772,GO:1902600,proton transmembrane transport,process,15,1236
PF04777,GO:0016972,thiol oxidase activity,function,3,1237
PF04785,GO:0016032,viral process,process,29,265
PF04790,GO:0016012,sarcoglycan complex,component,1,1238
PF04792,GO:0005576,extracellular region,component,203,16
PF04795,GO:0031011,Ino80 complex,component,4,1239
PF04799,GO:0008053,mitochondrial fusion,process,2,1240
PF04800,GO:0022900,electron transport chain,process,6,863
PF04801,GO:0006351,DNA-templated transcription,process,53,701
PF04805,GO:0016972,thiol oxidase activity,function,3,1237
PF04810,GO:0030127,COPII vesicle coat,component,3,1241
PF04811,GO:0030127,COPII vesicle coat,component,3,1241
PF04812,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF04813,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF04814,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF04815,GO:0030127,COPII vesicle coat,component,3,1241
PF04816,GO:0160105,tRNA (adenine(22)-N1)-methyltransferase activity,function,1,1242
PF04820,GO:0004497,monooxygenase activity,function,4,770
PF04825,GO:0005515,protein binding,function,122,10
PF04828,GO:0016846,carbon-sulfur lyase activity,function,3,1243
PF04831,GO:0016020,membrane,component,541,64
PF04833,GO:0010215,cellulose microfibril organization,process,1,1244
PF04834,GO:0009966,regulation of signal transduction,process,6,1148
PF04838,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF04839,GO:0005840,ribosome,component,86,74
PF04840,GO:0006886,intracellular protein transport,process,31,1029
PF04841,GO:0006886,intracellular protein transport,process,31,1029
PF04845,GO:0032422,purine-rich negative regulatory element binding,function,1,1245
PF04847,GO:0019722,calcium-mediated signaling,process,1,1246
PF04848,GO:0000400,four-way junction DNA binding,function,1,1247
PF04850,GO:0019031,viral envelope,component,33,212
PF04851,GO:0016787,hydrolase activity,function,35,65
PF04855,GO:0000228,nuclear chromosome,component,2,1248
PF04856,GO:0051276,chromosome organization,process,9,606
PF04858,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF04863,GO:0016846,carbon-sulfur lyase activity,function,3,1243
PF04864,GO:0016846,carbon-sulfur lyase activity,function,3,1243
PF04868,GO:0007601,visual perception,process,1,1249
PF04869,GO:0048280,vesicle fusion with Golgi apparatus,process,1,1250
PF04871,GO:0016192,vesicle-mediated transport,process,22,249
PF04873,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF04879,GO:0016491,oxidoreductase activity,function,68,22
PF04881,GO:0005537,mannose binding,function,2,1251
PF04882,GO:0007031,peroxisome organization,process,2,1252
PF04889,GO:0005681,spliceosomal complex,component,4,856
PF04891,GO:0030151,molybdenum ion binding,function,3,990
PF04893,GO:0016020,membrane,component,541,64
PF04898,GO:0015930,glutamate synthase activity,function,2,1253
PF04900,GO:0032040,small-subunit processome,component,5,1098
PF04901,GO:0008277,regulation of G protein-coupled receptor signaling pathway,process,1,1254
PF04902,GO:0003712,transcription coregulator activity,function,25,708
PF04904,GO:0003712,transcription coregulator activity,function,25,708
PF04905,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF04906,GO:0016020,membrane,component,541,64
PF04909,GO:0016787,hydrolase activity,function,35,65
PF04911,GO:0045263,"proton-transporting ATP synthase complex, coupling factor F(o)",component,4,49
PF04912,GO:0007017,microtubule-based process,process,2,1255
PF04916,GO:0004620,phospholipase activity,function,3,726
PF04922,GO:0106073,"dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity",function,1,1256
PF04923,GO:0042246,tissue regeneration,process,2,1257
PF04926,GO:0003723,RNA binding,function,118,6
PF04928,GO:1990817,poly(A) RNA polymerase activity,function,3,966
PF04931,GO:0008134,transcription factor binding,function,5,69
PF04934,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF04938,GO:0000387,spliceosomal snRNP assembly,process,2,1258
PF04939,GO:0042254,ribosome biogenesis,process,7,1183
PF04940,GO:0009882,blue light photoreceptor activity,function,1,1259
PF04941,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04947,GO:0046782,regulation of viral transcription,process,3,1260
PF04952,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF04958,GO:0008791,arginine N-succinyltransferase activity,function,1,1261
PF04960,GO:0006541,glutamine metabolic process,process,1,1262
PF04961,GO:0044237,cellular metabolic process,process,3,318
PF04962,GO:0016861,"intramolecular oxidoreductase activity, interconverting aldoses and ketoses",function,1,1263
PF04963,GO:0006352,DNA-templated transcription initiation,process,13,162
PF04966,GO:0008643,carbohydrate transport,process,4,1264
PF04971,GO:0001907,killing by symbiont of host cells,process,2,1084
PF04973,GO:0034258,nicotinamide riboside transport,process,1,1265
PF04976,GO:0019645,anaerobic electron transport chain,process,1,1266
PF04979,GO:0004864,protein phosphatase inhibitor activity,function,2,1267
PF04983,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04986,GO:0004803,transposase activity,function,10,327
PF04987,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF04988,GO:0005634,nucleus,component,149,411
PF04989,GO:0008610,lipid biosynthetic process,process,2,1133
PF04990,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04992,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04995,GO:0015886,heme transport,process,3,1268
PF04996,GO:0009015,N-succinylarginine dihydrolase activity,function,1,1269
PF04997,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04998,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF04999,GO:0051301,cell division,process,9,395
PF05000,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF05001,GO:0006366,transcription by RNA polymerase II,process,3,734
PF05003,GO:0045927,positive regulation of growth,process,2,1270
PF05007,GO:0051751,"alpha-1,4-mannosyltransferase activity",function,1,1271
PF05008,GO:0006886,intracellular protein transport,process,31,1029
PF05009,GO:0016032,viral process,process,29,265
PF05011,GO:0006397,mRNA processing,process,11,491
PF05019,GO:0006744,ubiquinone biosynthetic process,process,2,1272
PF05023,GO:0016756,glutathione gamma-glutamylcysteinyltransferase activity,function,2,1273
PF05024,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF05025,GO:0048029,monosaccharide binding,function,1,1274
PF05026,GO:0003723,RNA binding,function,118,6
PF05028,GO:0004649,poly(ADP-ribose) glycohydrolase activity,function,1,1275
PF05033,GO:0042054,histone methyltransferase activity,function,2,1276
PF05035,GO:0008671,2-dehydro-3-deoxygalactonokinase activity,function,1,1277
PF05036,GO:0042834,peptidoglycan binding,function,2,1156
PF05038,GO:0020037,heme binding,function,26,17
PF05039,GO:0009755,hormone-mediated signaling pathway,process,2,1278
PF05041,GO:0016020,membrane,component,541,64
PF05044,GO:0003677,DNA binding,function,320,19
PF05046,GO:0005840,ribosome,component,86,74
PF05049,GO:0005525,GTP binding,function,26,36
PF05051,GO:0016531,copper chaperone activity,function,1,1279
PF05052,GO:0015097,mercury ion transmembrane transporter activity,function,3,772
PF05053,GO:0005634,nucleus,component,149,411
PF05059,GO:0019028,viral capsid,component,65,138
PF05060,GO:0008455,"alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",function,1,1280
PF05066,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF05071,GO:0032981,mitochondrial respiratory chain complex I assembly,process,2,1281
PF05072,GO:0019033,viral tegument,component,2,935
PF05073,GO:0019028,viral capsid,component,65,138
PF05083,GO:0000902,cell morphogenesis,process,2,1047
PF05087,GO:0019013,viral nucleocapsid,component,17,317
PF05088,GO:0019551,glutamate catabolic process to 2-oxoglutarate,process,1,1282
PF05090,GO:0008488,gamma-glutamyl carboxylase activity,function,1,1283
PF05091,GO:0005852,eukaryotic translation initiation factor 3 complex,component,4,1284
PF05094,GO:0019083,viral transcription,process,6,911
PF05096,GO:0016603,glutaminyl-peptide cyclotransferase activity,function,1,1285
PF05098,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF05100,GO:0030430,host cell cytoplasm,component,5,542
PF05104,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF05107,GO:0043571,maintenance of CRISPR repeat elements,process,4,1286
PF05111,GO:0030345,structural constituent of tooth enamel,function,1,1287
PF05112,GO:0046782,regulation of viral transcription,process,3,1260
PF05115,GO:0009512,cytochrome b6f complex,component,4,799
PF05118,GO:0018193,peptidyl-amino acid modification,process,1,1288
PF05121,GO:0031412,gas vesicle organization,process,5,1289
PF05130,GO:0044780,bacterial-type flagellum assembly,process,4,808
PF05132,GO:0005666,RNA polymerase III complex,component,2,1290
PF05136,GO:0019068,virion assembly,process,8,256
PF05138,GO:0010124,phenylacetate catabolic process,process,1,1291
PF05139,GO:0046677,response to antibiotic,process,10,978
PF05144,GO:0006260,DNA replication,process,57,300
PF05145,GO:0010468,regulation of gene expression,process,3,787
PF05147,GO:0031179,peptide modification,process,1,1292
PF05148,GO:0008168,methyltransferase activity,function,37,63
PF05149,GO:0031514,motile cilium,component,2,1293
PF05151,GO:0019684,"photosynthesis, light reaction",process,6,1294
PF05153,GO:0019310,inositol catabolic process,process,1,1295
PF05155,GO:0006260,DNA replication,process,57,300
PF05158,GO:0005666,RNA polymerase III complex,component,2,1290
PF05159,GO:0015774,polysaccharide transport,process,1,1296
PF05160,GO:0008541,"proteasome regulatory particle, lid subcomplex",component,1,1297
PF05162,GO:0005840,ribosome,component,86,74
PF05165,GO:0003933,GTP cyclohydrolase activity,function,2,835
PF05171,GO:0006826,iron ion transport,process,3,1298
PF05173,GO:0008839,4-hydroxy-tetrahydrodipicolinate reductase,function,2,402
PF05175,GO:0008168,methyltransferase activity,function,37,63
PF05180,GO:0008270,zinc ion binding,function,101,229
PF05183,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF05184,GO:0006629,lipid metabolic process,process,14,204
PF05187,GO:0051536,iron-sulfur cluster binding,function,15,44
PF05188,GO:0030983,mismatched DNA binding,function,6,205
PF05190,GO:0030983,mismatched DNA binding,function,6,205
PF05191,GO:0004017,adenylate kinase activity,function,1,1299
PF05192,GO:0030983,mismatched DNA binding,function,6,205
PF05194,GO:0019627,urea metabolic process,process,1,1300
PF05195,GO:0070006,metalloaminopeptidase activity,function,3,329
PF05196,GO:0008083,growth factor activity,function,17,11
PF05197,GO:0071805,potassium ion transmembrane transport,process,3,1301
PF05198,GO:0006413,translational initiation,process,9,269
PF05199,GO:0016614,"oxidoreductase activity, acting on CH-OH group of donors",function,3,279
PF05201,GO:0008883,glutamyl-tRNA reductase activity,function,2,286
PF05203,GO:0030908,protein splicing,process,2,1302
PF05204,GO:0030908,protein splicing,process,2,1302
PF05206,GO:0008033,tRNA processing,process,8,632
PF05208,GO:0000030,mannosyltransferase activity,function,4,612
PF05209,GO:0051302,regulation of cell division,process,1,1303
PF05210,GO:0009966,regulation of signal transduction,process,6,1148
PF05211,GO:0009279,cell outer membrane,component,13,308
PF05215,GO:0016020,membrane,component,541,64
PF05217,GO:0008017,microtubule binding,function,17,712
PF05219,GO:0106370,protein-L-histidine N-pros-methyltransferase activity,function,1,1304
PF05223,GO:0046677,response to antibiotic,process,10,978
PF05224,GO:0003677,DNA binding,function,320,19
PF05225,GO:0003677,DNA binding,function,320,19
PF05234,GO:0006360,transcription by RNA polymerase I,process,3,1305
PF05236,GO:0005669,transcription factor TFIID complex,component,3,1067
PF05238,GO:0034080,CENP-A containing chromatin assembly,process,3,1306
PF05247,GO:0044780,bacterial-type flagellum assembly,process,4,808
PF05251,GO:0034998,oligosaccharyltransferase I complex,component,1,1307
PF05261,GO:0003677,DNA binding,function,320,19
PF05269,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF05270,GO:0046373,L-arabinose metabolic process,process,3,1034
PF05273,GO:0019083,viral transcription,process,6,911
PF05274,GO:0019031,viral envelope,component,33,212
PF05275,GO:0006878,intracellular copper ion homeostasis,process,1,1308
PF05276,GO:0035556,intracellular signal transduction,process,8,240
PF05279,GO:0016020,membrane,component,541,64
PF05280,GO:1902208,regulation of bacterial-type flagellum assembly,process,1,1309
PF05281,GO:0030141,secretory granule,component,2,459
PF05292,GO:0050080,malonyl-CoA decarboxylase activity,function,1,1310
PF05294,GO:0005576,extracellular region,component,203,16
PF05296,GO:0033038,bitter taste receptor activity,function,1,1311
PF05297,GO:0019087,transformation of host cell by virus,process,2,883
PF05298,GO:0042742,defense response to bacterium,process,23,591
PF05300,GO:0061617,MICOS complex,component,4,1184
PF05301,GO:0019799,tubulin N-acetyltransferase activity,function,1,1312
PF05307,GO:0009289,pilus,component,8,46
PF05313,GO:0016020,membrane,component,541,64
PF05314,GO:0019031,viral envelope,component,33,212
PF05316,GO:0006412,translation,process,91,83
PF05320,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF05324,GO:0005576,extracellular region,component,203,16
PF05326,GO:0005576,extracellular region,component,203,16
PF05327,GO:0006361,transcription initiation at RNA polymerase I promoter,process,2,1313
PF05336,GO:0016857,"racemase and epimerase activity, acting on carbohydrates and derivatives",function,2,313
PF05337,GO:0005125,cytokine activity,function,10,468
PF05342,GO:0004222,metalloendopeptidase activity,function,25,511
PF05349,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF05353,GO:0019871,sodium channel inhibitor activity,function,8,1314
PF05354,GO:0019068,virion assembly,process,8,256
PF05355,GO:0042627,chylomicron,component,2,1315
PF05361,GO:0042325,regulation of phosphorylation,process,1,1316
PF05362,GO:0004176,ATP-dependent peptidase activity,function,3,522
PF05363,GO:0019049,virus-mediated perturbation of host defense response,process,7,553
PF05365,GO:0006122,"mitochondrial electron transport, ubiquinol to cytochrome c",process,5,735
PF05366,GO:0030234,enzyme regulator activity,function,6,1317
PF05367,GO:0008833,deoxyribonuclease IV (phage-T4-induced) activity,function,1,1318
PF05369,GO:0032259,methylation,process,3,594
PF05372,GO:0019836,hemolysis by symbiont of host erythrocytes,process,6,728
PF05373,GO:0016706,2-oxoglutarate-dependent dioxygenase activity,function,3,1319
PF05374,GO:0019871,sodium channel inhibitor activity,function,8,1314
PF05375,GO:0030414,peptidase inhibitor activity,function,3,37
PF05379,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF05381,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF05384,GO:0016301,kinase activity,function,13,169
PF05388,GO:0005773,vacuole,component,1,1320
PF05390,GO:0006078,(1->6)-beta-D-glucan biosynthetic process,process,1,1321
PF05392,GO:0005746,mitochondrial respirasome,component,1,1322
PF05393,GO:0016020,membrane,component,541,64
PF05395,GO:0004864,protein phosphatase inhibitor activity,function,2,1267
PF05396,GO:0019069,viral capsid assembly,process,9,744
PF05397,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF05398,GO:0030494,bacteriochlorophyll biosynthetic process,process,2,1323
PF05399,GO:0016020,membrane,component,541,64
PF05401,GO:0009312,oligosaccharide biosynthetic process,process,3,1324
PF05404,GO:0005783,endoplasmic reticulum,component,13,1325
PF05405,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF05407,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF05408,GO:0019082,viral protein processing,process,7,1233
PF05409,GO:0019082,viral protein processing,process,7,1233
PF05410,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF05411,GO:0008234,cysteine-type peptidase activity,function,9,45
PF05412,GO:0019082,viral protein processing,process,7,1233
PF05413,GO:0019079,viral genome replication,process,13,283
PF05416,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF05417,GO:0019082,viral protein processing,process,7,1233
PF05418,GO:0042627,chylomicron,component,2,1315
PF05420,GO:0030244,cellulose biosynthetic process,process,3,1005
PF05424,GO:0046789,host cell surface receptor binding,function,6,184
PF05425,GO:0016020,membrane,component,541,64
PF05426,GO:0042597,periplasmic space,component,13,1111
PF05428,GO:0051424,corticotropin-releasing hormone binding,function,1,1326
PF05430,GO:0016645,"oxidoreductase activity, acting on the CH-NH group of donors",function,1,1327
PF05431,GO:0090729,toxin activity,function,13,410
PF05432,GO:0001503,ossification,process,4,323
PF05433,GO:0019867,outer membrane,component,22,397
PF05434,GO:0005765,lysosomal membrane,component,1,1328
PF05435,GO:0018142,protein-DNA covalent cross-linking,process,3,815
PF05436,GO:0007618,mating,process,2,928
PF05438,GO:0008437,thyrotropin-releasing hormone activity,function,1,1329
PF05439,GO:0016020,membrane,component,541,64
PF05440,GO:0030269,tetrahydromethanopterin S-methyltransferase activity,function,6,1154
PF05443,GO:0008270,zinc ion binding,function,101,229
PF05445,GO:0004672,protein kinase activity,function,6,28
PF05452,GO:0005576,extracellular region,component,203,16
PF05453,GO:0008200,ion channel inhibitor activity,function,7,197
PF05454,GO:0016010,dystrophin-associated glycoprotein complex,component,1,1330
PF05456,GO:0008190,eukaryotic initiation factor 4E binding,function,1,1331
PF05459,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF05460,GO:0005664,nuclear origin of replication recognition complex,component,1,1332
PF05461,GO:0042157,lipoprotein metabolic process,process,5,523
PF05463,GO:0005615,extracellular space,component,21,129
PF05464,GO:0016987,sigma factor activity,function,5,60
PF05465,GO:0031411,gas vesicle,component,3,473
PF05470,GO:0031369,translation initiation factor binding,function,1,1333
PF05472,GO:0006274,DNA replication termination,process,2,756
PF05474,GO:0050817,coagulation,process,1,1334
PF05476,GO:0070131,positive regulation of mitochondrial translation,process,1,1335
PF05478,GO:0016020,membrane,component,541,64
PF05479,GO:0009522,photosystem I,component,10,298
PF05481,GO:0016020,membrane,component,541,64
PF05482,GO:0007349,cellularization,process,1,1336
PF05483,GO:0000795,synaptonemal complex,component,2,1337
PF05491,GO:0009378,four-way junction helicase activity,function,4,483
PF05493,GO:0033179,"proton-transporting V-type ATPase, V0 domain",component,2,530
PF05495,GO:0008270,zinc ion binding,function,101,229
PF05496,GO:0009378,four-way junction helicase activity,function,4,483
PF05497,GO:0003796,lysozyme activity,function,4,1338
PF05499,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF05502,GO:0005869,dynactin complex,component,3,1339
PF05505,GO:0019074,viral RNA genome packaging,process,1,1340
PF05506,GO:0004629,phospholipase C activity,function,1,1341
PF05507,GO:0001527,microfibril,component,1,1342
PF05509,GO:0003677,DNA binding,function,320,19
PF05511,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF05513,GO:0005576,extracellular region,component,203,16
PF05517,GO:0046785,microtubule polymerization,process,1,1343
PF05524,GO:0009401,phosphoenolpyruvate-dependent sugar phosphotransferase system,process,15,164
PF05525,GO:0015658,branched-chain amino acid transmembrane transporter activity,function,1,1344
PF05527,GO:0042981,regulation of apoptotic process,process,5,243
PF05531,GO:0039679,viral occlusion body,component,1,1345
PF05543,GO:0008234,cysteine-type peptidase activity,function,9,45
PF05547,GO:0008233,peptidase activity,function,18,349
PF05550,GO:0019082,viral protein processing,process,7,1233
PF05556,GO:0030018,Z disc,component,1,1346
PF05557,GO:0007094,mitotic spindle assembly checkpoint signaling,process,1,1347
PF05558,GO:0005886,plasma membrane,component,39,823
PF05562,GO:0016020,membrane,component,541,64
PF05571,GO:0006986,response to unfolded protein,process,1,1348
PF05577,GO:0070008,serine-type exopeptidase activity,function,6,1349
PF05578,GO:0004252,serine-type endopeptidase activity,function,29,35
PF05579,GO:0019082,viral protein processing,process,7,1233
PF05586,GO:0038023,signaling receptor activity,function,8,1217
PF05587,GO:0038023,signaling receptor activity,function,8,1217
PF05602,GO:0016020,membrane,component,541,64
PF05609,GO:0001671,ATPase activator activity,function,3,1068
PF05615,GO:0000445,THO complex part of transcription export complex,component,1,1350
PF05622,GO:0031122,cytoplasmic microtubule organization,process,2,1351
PF05625,GO:0033588,elongator holoenzyme complex,component,4,1232
PF05631,GO:0015098,molybdate ion transmembrane transporter activity,function,2,1352
PF05634,GO:0003723,RNA binding,function,118,6
PF05637,GO:0016757,glycosyltransferase activity,function,16,218
PF05639,GO:0070490,protein pupylation,process,1,1353
PF05645,GO:0006351,DNA-templated transcription,process,53,701
PF05648,GO:0016559,peroxisome fission,process,1,1354
PF05649,GO:0006508,proteolysis,process,84,345
PF05652,GO:0000290,deadenylation-dependent decapping of nuclear-transcribed mRNA,process,2,1355
PF05653,GO:0015693,magnesium ion transport,process,1,1356
PF05656,GO:0016020,membrane,component,541,64
PF05658,GO:0019867,outer membrane,component,22,397
PF05662,GO:0019867,outer membrane,component,22,397
PF05669,GO:0003712,transcription coregulator activity,function,25,708
PF05672,GO:0015630,microtubule cytoskeleton,component,2,1357
PF05676,GO:0005739,mitochondrion,component,27,1358
PF05679,GO:0032580,Golgi cisterna membrane,component,1,1359
PF05680,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF05681,GO:0016829,lyase activity,function,20,268
PF05683,GO:0016836,hydro-lyase activity,function,5,343
PF05693,GO:0005978,glycogen biosynthetic process,process,1,1360
PF05694,GO:0008430,selenium binding,function,1,1361
PF05697,GO:0006457,protein folding,process,14,489
PF05698,GO:0006457,protein folding,process,14,489
PF05699,GO:0046983,protein dimerization activity,function,22,4
PF05700,GO:0006397,mRNA processing,process,11,491
PF05704,GO:0016757,glycosyltransferase activity,function,16,218
PF05706,GO:0004721,phosphoprotein phosphatase activity,function,5,1225
PF05715,GO:0045202,synapse,component,1,1362
PF05719,GO:0070273,phosphatidylinositol-4-phosphate binding,function,1,1363
PF05720,GO:0007155,cell adhesion,process,28,363
PF05722,GO:0005634,nucleus,component,149,411
PF05724,GO:0008757,S-adenosylmethionine-dependent methyltransferase activity,function,4,1364
PF05731,GO:0003723,RNA binding,function,118,6
PF05732,GO:0006276,plasmid maintenance,process,4,763
PF05733,GO:0003723,RNA binding,function,118,6
PF05735,GO:0007155,cell adhesion,process,28,363
PF05737,GO:0005518,collagen binding,function,1,1365
PF05743,GO:0036211,protein modification process,process,6,721
PF05745,GO:0019867,outer membrane,component,22,397
PF05746,GO:0006420,arginyl-tRNA aminoacylation,process,2,1002
PF05748,GO:0019013,viral nucleocapsid,component,17,317
PF05749,GO:0019013,viral nucleocapsid,component,17,317
PF05750,GO:0019013,viral nucleocapsid,component,17,317
PF05757,GO:0019898,extrinsic component of membrane,component,3,610
PF05758,GO:0016020,membrane,component,541,64
PF05767,GO:0019031,viral envelope,component,33,212
PF05773,GO:0005515,protein binding,function,122,10
PF05777,GO:0007617,mating behavior,process,1,1366
PF05778,GO:0042157,lipoprotein metabolic process,process,5,523
PF05782,GO:0007165,signal transduction,process,34,8
PF05786,GO:0007076,mitotic chromosome condensation,process,1,1367
PF05788,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF05790,GO:0007155,cell adhesion,process,28,363
PF05791,GO:0016020,membrane,component,541,64
PF05792,GO:0007155,cell adhesion,process,28,363
PF05793,GO:0032968,positive regulation of transcription elongation by RNA polymerase II,process,1,1368
PF05797,GO:0030541,plasmid partitioning,process,1,1369
PF05800,GO:0031412,gas vesicle organization,process,5,1289
PF05805,GO:0016020,membrane,component,541,64
PF05817,GO:0008250,oligosaccharyltransferase complex,component,2,689
PF05818,GO:0019867,outer membrane,component,22,397
PF05821,GO:0005739,mitochondrion,component,27,1358
PF05822,GO:0008253,5'-nucleotidase activity,function,3,1370
PF05823,GO:0008289,lipid binding,function,11,449
PF05824,GO:0030354,melanin-concentrating hormone activity,function,1,1371
PF05826,GO:0006644,phospholipid metabolic process,process,2,27
PF05829,GO:0019013,viral nucleocapsid,component,17,317
PF05830,GO:0009312,oligosaccharide biosynthetic process,process,3,1324
PF05832,GO:0016020,membrane,component,541,64
PF05835,GO:0019905,syntaxin binding,function,2,1372
PF05836,GO:0042600,egg chorion,component,6,1087
PF05837,GO:0051382,kinetochore assembly,process,4,1373
PF05839,GO:0005680,anaphase-promoting complex,component,8,1110
PF05840,GO:0006260,DNA replication,process,57,300
PF05841,GO:0031145,anaphase-promoting complex-dependent catabolic process,process,3,1374
PF05842,GO:0005186,pheromone activity,function,3,918
PF05843,GO:0006396,RNA processing,process,18,535
PF05845,GO:0019634,organic phosphonate metabolic process,process,3,1375
PF05847,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF05849,GO:0005576,extracellular region,component,203,16
PF05851,GO:0019058,viral life cycle,process,14,186
PF05853,GO:0043720,3-keto-5-aminohexanoate cleavage activity,function,1,1376
PF05854,GO:0042262,DNA protection,process,2,1377
PF05856,GO:0030041,actin filament polymerization,process,1,1378
PF05859,GO:0000278,mitotic cell cycle,process,5,1379
PF05861,GO:0019634,organic phosphonate metabolic process,process,3,1375
PF05864,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF05866,GO:0006310,DNA recombination,process,25,386
PF05868,GO:0044423,virion component,component,16,368
PF05869,GO:0032775,DNA methylation on adenine,process,2,679
PF05870,GO:0016831,carboxy-lyase activity,function,2,1040
PF05871,GO:0071985,multivesicular body sorting pathway,process,1,1380
PF05873,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF05874,GO:0042811,pheromone biosynthetic process,process,1,1381
PF05875,GO:0006672,ceramide metabolic process,process,1,1382
PF05876,GO:0016887,ATP hydrolysis activity,function,15,1
PF05881,GO:0004113,"2',3'-cyclic-nucleotide 3'-phosphodiesterase activity",function,1,1383
PF05887,GO:0016020,membrane,component,541,64
PF05889,GO:0016740,transferase activity,function,18,291
PF05891,GO:0006480,N-terminal protein amino acid methylation,process,1,1384
PF05892,GO:0019028,viral capsid,component,65,138
PF05893,GO:0003995,acyl-CoA dehydrogenase activity,function,2,1385
PF05896,GO:0016655,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",function,6,1386
PF05902,GO:0005856,cytoskeleton,component,6,260
PF05903,GO:0008233,peptidase activity,function,18,349
PF05920,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF05923,GO:0016055,Wnt signaling pathway,process,7,43
PF05924,GO:0008013,beta-catenin binding,function,5,1387
PF05925,GO:0016791,phosphatase activity,function,8,115
PF05926,GO:0019069,viral capsid assembly,process,9,744
PF05927,GO:0008061,chitin binding,function,4,82
PF05929,GO:0019069,viral capsid assembly,process,9,744
PF05932,GO:0030254,protein secretion by the type III secretion system,process,3,1388
PF05933,GO:0045263,"proton-transporting ATP synthase complex, coupling factor F(o)",component,4,49
PF05935,GO:0004062,aryl sulfotransferase activity,function,1,1389
PF05937,GO:0008013,beta-catenin binding,function,5,1387
PF05944,GO:0019069,viral capsid assembly,process,9,744
PF05946,GO:0043230,extracellular organelle,component,1,1390
PF05953,GO:0005184,neuropeptide hormone activity,function,7,1391
PF05955,GO:0016032,viral process,process,29,265
PF05956,GO:0016055,Wnt signaling pathway,process,7,43
PF05958,GO:0008173,RNA methyltransferase activity,function,2,233
PF05964,GO:0005634,nucleus,component,149,411
PF05965,GO:0005634,nucleus,component,149,411
PF05969,GO:0009523,photosystem II,component,19,136
PF05970,GO:0000723,telomere maintenance,process,3,1392
PF05971,GO:0008168,methyltransferase activity,function,37,63
PF05972,GO:0008013,beta-catenin binding,function,5,1387
PF05975,GO:0016020,membrane,component,541,64
PF05983,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF05985,GO:0008851,ethanolamine ammonia-lyase activity,function,2,1393
PF05992,GO:1904680,peptide transmembrane transporter activity,function,1,1394
PF05993,GO:0039624,viral outer capsid,component,1,1395
PF05994,GO:0030833,regulation of actin filament polymerization,process,1,1396
PF05995,GO:0016702,"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen",function,5,144
PF05996,GO:0016636,"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor",function,1,1397
PF05997,GO:0030688,"preribosome, small subunit precursor",component,2,1398
PF06003,GO:0006397,mRNA processing,process,11,491
PF06005,GO:0043093,FtsZ-dependent cytokinesis,process,1,1399
PF06007,GO:0019700,organic phosphonate catabolic process,process,1,1400
PF06008,GO:0045995,regulation of embryonic development,process,1,1401
PF06009,GO:0007155,cell adhesion,process,28,363
PF06016,GO:0019028,viral capsid,component,65,138
PF06017,GO:0016459,myosin complex,component,4,24
PF06018,GO:0005525,GTP binding,function,26,36
PF06021,GO:0047961,glycine N-acyltransferase activity,function,1,1402
PF06026,GO:0004751,ribose-5-phosphate isomerase activity,function,1,1403
PF06027,GO:0022857,transmembrane transporter activity,function,25,34
PF06039,GO:0008924,malate dehydrogenase (quinone) activity,function,1,1404
PF06046,GO:0000145,exocyst,component,4,1405
PF06047,GO:0003682,chromatin binding,function,4,520
PF06049,GO:0007596,blood coagulation,process,3,1406
PF06052,GO:0000334,"3-hydroxyanthranilate 3,4-dioxygenase activity",function,1,1407
PF06056,GO:0019069,viral capsid assembly,process,9,744
PF06058,GO:0000290,deadenylation-dependent decapping of nuclear-transcribed mRNA,process,2,1355
PF06061,GO:0008270,zinc ion binding,function,101,229
PF06064,GO:0060703,deoxyribonuclease inhibitor activity,function,1,1408
PF06068,GO:0005524,ATP binding,function,178,2
PF06070,GO:0005198,structural molecule activity,function,90,30
PF06072,GO:0075733,intracellular transport of virus,process,1,1409
PF06079,GO:0017110,nucleoside diphosphate phosphatase activity,function,1,1410
PF06083,GO:0005125,cytokine activity,function,10,468
PF06085,GO:0044659,viral release from host cell by cytolysis,process,4,957
PF06087,GO:0008081,phosphoric diester hydrolase activity,function,2,910
PF06090,GO:0035299,inositol pentakisphosphate 2-kinase activity,function,1,1411
PF06100,GO:0050151,oleate hydratase activity,function,1,1412
PF06105,GO:0043085,positive regulation of catalytic activity,process,2,1413
PF06109,GO:0044179,hemolysis in another organism,process,2,1414
PF06112,GO:0019028,viral capsid,component,65,138
PF06113,GO:0070531,BRCA1-A complex,component,1,1415
PF06116,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF06119,GO:0007160,cell-matrix adhesion,process,2,306
PF06130,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF06134,GO:0008740,L-rhamnose isomerase activity,function,1,1416
PF06140,GO:0016020,membrane,component,541,64
PF06144,GO:0009360,DNA polymerase III complex,component,5,271
PF06151,GO:0008527,taste receptor activity,function,1,1417
PF06152,GO:0005198,structural molecule activity,function,90,30
PF06154,GO:0051495,positive regulation of cytoskeleton organization,process,1,1418
PF06156,GO:0006260,DNA replication,process,57,300
PF06160,GO:0000921,septin ring assembly,process,1,1419
PF06175,GO:0045301,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity,function,1,1420
PF06179,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF06180,GO:0019251,anaerobic cobalamin biosynthetic process,process,1,1421
PF06184,GO:0019028,viral capsid,component,65,138
PF06189,GO:0009117,nucleotide metabolic process,process,2,1422
PF06203,GO:0005515,protein binding,function,122,10
PF06206,GO:0017009,protein-phycocyanobilin linkage,process,2,1423
PF06209,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF06213,GO:0009236,cobalamin biosynthetic process,process,9,633
PF06214,GO:0046649,lymphocyte activation,process,1,1424
PF06220,GO:0008270,zinc ion binding,function,101,229
PF06221,GO:0008270,zinc ion binding,function,101,229
PF06236,GO:0042438,melanin biosynthetic process,process,1,1425
PF06237,GO:0032218,riboflavin transport,process,1,1426
PF06246,GO:0000350,generation of catalytic spliceosome for second transesterification step,process,1,1427
PF06247,GO:0009986,cell surface,component,3,380
PF06248,GO:0000278,mitotic cell cycle,process,5,1379
PF06253,GO:0015948,methanogenesis,process,11,791
PF06257,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF06268,GO:0030674,protein-macromolecule adaptor activity,function,2,1094
PF06273,GO:0003743,translation initiation factor activity,function,12,1428
PF06280,GO:0005618,cell wall,component,7,502
PF06281,GO:0005198,structural molecule activity,function,90,30
PF06286,GO:0042742,defense response to bacterium,process,23,591
PF06297,GO:0008270,zinc ion binding,function,101,229
PF06298,GO:0030145,manganese ion binding,function,7,1429
PF06305,GO:0005886,plasma membrane,component,39,823
PF06308,GO:0046677,response to antibiotic,process,10,978
PF06309,GO:0016887,ATP hydrolysis activity,function,15,1
PF06314,GO:0016829,lyase activity,function,20,268
PF06315,GO:0008772,[isocitrate dehydrogenase (NADP+)] kinase activity,function,1,1430
PF06316,GO:0044384,host outer membrane,component,1,1431
PF06317,GO:0019079,viral genome replication,process,13,283
PF06324,GO:0009416,response to light stimulus,process,1,1432
PF06326,GO:0019031,viral envelope,component,33,212
PF06327,GO:0006171,cAMP biosynthetic process,process,3,470
PF06330,GO:0016838,"carbon-oxygen lyase activity, acting on phosphates",function,1,1433
PF06331,GO:0000439,transcription factor TFIIH core complex,component,3,1069
PF06333,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF06337,GO:0004843,cysteine-type deubiquitinase activity,function,5,393
PF06338,GO:0030420,establishment of competence for transformation,process,1,1434
PF06339,GO:0019491,ectoine biosynthetic process,process,1,1435
PF06350,GO:0008203,cholesterol metabolic process,process,2,1436
PF06351,GO:0016853,isomerase activity,function,9,454
PF06355,GO:0019836,hemolysis by symbiont of host erythrocytes,process,6,728
PF06357,GO:0019855,calcium channel inhibitor activity,function,3,1437
PF06363,GO:0044423,virion component,component,16,368
PF06367,GO:0016043,cellular component organization,process,1,1438
PF06368,GO:0019670,anaerobic glutamate catabolic process,process,1,1439
PF06369,GO:0046930,pore complex,component,1,1440
PF06371,GO:0030036,actin cytoskeleton organization,process,3,1441
PF06373,GO:0008343,adult feeding behavior,process,1,1442
PF06374,GO:0006120,"mitochondrial electron transport, NADH to ubiquinone",process,3,1443
PF06375,GO:0030123,AP-3 adaptor complex,component,1,1444
PF06377,GO:0005179,hormone activity,function,28,21
PF06379,GO:0008645,hexose transmembrane transport,process,1,1445
PF06382,GO:0035092,sperm DNA condensation,process,3,121
PF06384,GO:0008013,beta-catenin binding,function,5,1387
PF06385,GO:0019058,viral life cycle,process,14,186
PF06386,GO:0031411,gas vesicle,component,3,473
PF06387,GO:0032051,clathrin light chain binding,function,1,1446
PF06389,GO:0016032,viral process,process,29,265
PF06390,GO:0071107,response to parathyroid hormone,process,1,1447
PF06392,GO:0010447,response to acidic pH,process,1,1448
PF06393,GO:0043065,positive regulation of apoptotic process,process,4,1449
PF06396,GO:0038166,angiotensin-activated signaling pathway,process,1,1450
PF06397,GO:0005506,iron ion binding,function,22,142
PF06399,GO:0009890,negative regulation of biosynthetic process,process,1,1451
PF06401,GO:0050750,low-density lipoprotein particle receptor binding,function,1,1452
PF06403,GO:0031012,extracellular matrix,component,2,181
PF06404,GO:0008283,cell population proliferation,process,1,1453
PF06405,GO:0051743,red chlorophyll catabolite reductase activity,function,1,1454
PF06414,GO:0016301,kinase activity,function,13,169
PF06415,GO:0006007,glucose catabolic process,process,1,1455
PF06416,GO:0044403,biological process involved in symbiotic interaction,process,1,1456
PF06418,GO:0006221,pyrimidine nucleotide biosynthetic process,process,1,1457
PF06420,GO:0000262,mitochondrial chromosome,component,1,1458
PF06422,GO:0042626,ATPase-coupled transmembrane transporter activity,function,2,1459
PF06423,GO:0016746,acyltransferase activity,function,9,88
PF06424,GO:0000398,"mRNA splicing, via spliceosome",process,12,979
PF06426,GO:0009001,serine O-acetyltransferase activity,function,1,1460
PF06427,GO:0003980,UDP-glucose:glycoprotein glucosyltransferase activity,function,1,1461
PF06431,GO:0006260,DNA replication,process,57,300
PF06432,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF06433,GO:0030058,amine dehydrogenase activity,function,1,1462
PF06434,GO:0003994,aconitate hydratase activity,function,2,1463
PF06436,GO:0046782,regulation of viral transcription,process,3,1260
PF06437,GO:0050483,IMP 5'-nucleotidase activity,function,1,1464
PF06439,GO:0016787,hydrolase activity,function,35,65
PF06440,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF06442,GO:0009410,response to xenobiotic stimulus,process,1,1465
PF06444,GO:0006120,"mitochondrial electron transport, NADH to ubiquinone",process,3,1443
PF06446,GO:0006879,intracellular iron ion homeostasis,process,1,1466
PF06448,GO:0005319,lipid transporter activity,function,4,490
PF06449,GO:0005739,mitochondrion,component,27,1358
PF06450,GO:0015385,sodium:proton antiporter activity,function,2,1467
PF06451,GO:0042742,defense response to bacterium,process,23,591
PF06452,GO:0016052,carbohydrate catabolic process,process,3,1468
PF06453,GO:0005576,extracellular region,component,203,16
PF06456,GO:0019904,protein domain specific binding,function,2,1469
PF06457,GO:0005216,monoatomic ion channel activity,function,3,214
PF06459,GO:0005219,ryanodine-sensitive calcium-release channel activity,function,1,1470
PF06461,GO:0006338,chromatin remodeling,process,11,1219
PF06463,GO:0019008,molybdopterin synthase complex,component,1,1471
PF06466,GO:0004402,histone acetyltransferase activity,function,4,624
PF06467,GO:0008270,zinc ion binding,function,101,229
PF06470,GO:0005694,chromosome,component,4,508
PF06471,GO:0004532,RNA exonuclease activity,function,1,1472
PF06472,GO:0140359,ABC-type transporter activity,function,7,257
PF06478,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF06479,GO:0004540,RNA nuclease activity,function,7,293
PF06480,GO:0004176,ATP-dependent peptidase activity,function,3,522
PF06481,GO:0009486,cytochrome bo3 ubiquinol oxidase activity,function,1,1473
PF06484,GO:0007165,signal transduction,process,34,8
PF06495,GO:0046660,female sex differentiation,process,1,1474
PF06506,GO:0000156,phosphorelay response regulator activity,function,2,1475
PF06507,GO:0009725,response to hormone,process,1,1476
PF06512,GO:0005248,voltage-gated sodium channel activity,function,1,1477
PF06514,GO:0042549,photosystem II stabilization,process,3,599
PF06516,GO:0055085,transmembrane transport,process,55,151
PF06519,GO:0043213,bacteriocin transport,process,1,1478
PF06524,GO:0008270,zinc ion binding,function,101,229
PF06529,GO:0007623,circadian rhythm,process,3,1479
PF06530,GO:0060567,negative regulation of termination of DNA-templated transcription,process,1,1480
PF06536,GO:0019062,virion attachment to host cell,process,5,221
PF06546,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF06553,GO:0005740,mitochondrial envelope,component,2,440
PF06554,GO:0007608,sensory perception of smell,process,2,894
PF06558,GO:0045182,translation regulator activity,function,2,1481
PF06559,GO:0009394,2'-deoxyribonucleotide metabolic process,process,1,1482
PF06560,GO:0004347,glucose-6-phosphate isomerase activity,function,3,154
PF06573,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF06574,GO:0003919,FMN adenylyltransferase activity,function,1,1483
PF06580,GO:0000155,phosphorelay sensor kinase activity,function,10,211
PF06581,GO:0007096,regulation of exit from mitosis,process,1,1484
PF06583,GO:0016020,membrane,component,541,64
PF06596,GO:0009523,photosystem II,component,19,136
PF06608,GO:0005634,nucleus,component,149,411
PF06609,GO:0022857,transmembrane transporter activity,function,25,34
PF06610,GO:0034639,L-amino acid efflux transmembrane transporter activity,function,1,1485
PF06613,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF06614,GO:0040008,regulation of growth,process,1,1486
PF06616,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF06617,GO:1902751,positive regulation of cell cycle G2/M phase transition,process,1,1487
PF06621,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF06623,GO:0019882,antigen processing and presentation,process,5,1488
PF06624,GO:0005783,endoplasmic reticulum,component,13,1325
PF06630,GO:0051908,double-stranded DNA 5'-3' exodeoxyribonuclease activity,function,1,1489
PF06632,GO:0006302,double-strand break repair,process,5,1144
PF06638,GO:0007275,multicellular organism development,process,19,194
PF06644,GO:0065003,protein-containing complex assembly,process,2,1490
PF06645,GO:0005787,signal peptidase complex,component,3,1202
PF06652,GO:0004930,G protein-coupled receptor activity,function,11,0
PF06657,GO:0008017,microtubule binding,function,17,712
PF06658,GO:0003725,double-stranded RNA binding,function,3,369
PF06663,GO:0009966,regulation of signal transduction,process,6,1148
PF06667,GO:0009271,phage shock,process,1,1491
PF06668,GO:0030212,hyaluronan metabolic process,process,1,1492
PF06682,GO:2001256,regulation of store-operated calcium entry,process,1,1493
PF06687,GO:0005886,plasma membrane,component,39,823
PF06689,GO:0046983,protein dimerization activity,function,22,4
PF06694,GO:0051011,microtubule minus-end binding,function,1,1494
PF06699,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF06701,GO:0004842,ubiquitin-protein transferase activity,function,8,247
PF06703,GO:0005787,signal peptidase complex,component,3,1202
PF06705,GO:0005200,structural constituent of cytoskeleton,function,4,1495
PF06713,GO:0030153,bacteriocin immunity,process,8,1496
PF06714,GO:0005515,protein binding,function,122,10
PF06720,GO:0039693,viral DNA genome replication,process,4,1497
PF06725,GO:0009254,peptidoglycan turnover,process,2,1498
PF06729,GO:0034080,CENP-A containing chromatin assembly,process,3,1306
PF06732,GO:0005730,nucleolus,component,5,1499
PF06733,GO:0003678,DNA helicase activity,function,8,213
PF06734,GO:0004672,protein kinase activity,function,6,28
PF06736,GO:0015252,proton channel activity,function,2,944
PF06737,GO:0016787,hydrolase activity,function,35,65
PF06738,GO:0022857,transmembrane transporter activity,function,25,34
PF06740,GO:0000226,microtubule cytoskeleton organization,process,5,1500
PF06743,GO:0044528,regulation of mitochondrial mRNA stability,process,1,1501
PF06751,GO:0008851,ethanolamine ammonia-lyase activity,function,2,1393
PF06753,GO:0035821,modulation of process of another organism,process,1,1502
PF06754,GO:0015716,organic phosphonate transport,process,1,1503
PF06762,GO:0051604,protein maturation,process,2,424
PF06766,GO:0005576,extracellular region,component,203,16
PF06769,GO:0006401,RNA catabolic process,process,2,1504
PF06775,GO:0019915,lipid storage,process,3,1505
PF06778,GO:0020037,heme binding,function,26,17
PF06783,GO:0016020,membrane,component,541,64
PF06784,GO:0032981,mitochondrial respiratory chain complex I assembly,process,2,1281
PF06788,GO:0005886,plasma membrane,component,39,823
PF06800,GO:0015144,carbohydrate transmembrane transporter activity,function,1,1506
PF06807,GO:0031124,mRNA 3'-end processing,process,2,1507
PF06809,GO:0016020,membrane,component,541,64
PF06810,GO:0019069,viral capsid assembly,process,9,744
PF06814,GO:0016020,membrane,component,541,64
PF06815,GO:0006278,RNA-templated DNA biosynthetic process,process,2,1508
PF06816,GO:0030154,cell differentiation,process,4,1509
PF06817,GO:0006278,RNA-templated DNA biosynthetic process,process,2,1508
PF06821,GO:0016787,hydrolase activity,function,35,65
PF06825,GO:0003714,transcription corepressor activity,function,3,1510
PF06831,GO:0003906,DNA-(apurinic or apyrimidinic site) endonuclease activity,function,3,1511
PF06839,GO:0008270,zinc ion binding,function,101,229
PF06841,GO:0005198,structural molecule activity,function,90,30
PF06849,GO:0016879,"ligase activity, forming carbon-nitrogen bonds",function,4,1512
PF06858,GO:0005525,GTP binding,function,26,36
PF06859,GO:0008168,methyltransferase activity,function,37,63
PF06862,GO:0034511,U3 snoRNA binding,function,1,1513
PF06870,GO:0006351,DNA-templated transcription,process,53,701
PF06872,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF06874,GO:0042132,"fructose 1,6-bisphosphate 1-phosphatase activity",function,2,972
PF06876,GO:0007165,signal transduction,process,34,8
PF06881,GO:0070449,elongin complex,component,1,1514
PF06883,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF06888,GO:0016791,phosphatase activity,function,8,115
PF06892,GO:0003677,DNA binding,function,320,19
PF06899,GO:0009246,enterobacterial common antigen biosynthetic process,process,2,1515
PF06905,GO:0043066,negative regulation of apoptotic process,process,4,1516
PF06917,GO:0045490,pectin catabolic process,process,2,1517
PF06925,GO:0009247,glycolipid biosynthetic process,process,2,1518
PF06929,GO:0004482,mRNA 5'-cap (guanine-N7-)-methyltransferase activity,function,3,1519
PF06936,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF06941,GO:0009264,deoxyribonucleotide catabolic process,process,1,1520
PF06951,GO:0004623,phospholipase A2 activity,function,3,1521
PF06953,GO:0046685,response to arsenic-containing substance,process,1,1522
PF06954,GO:0005179,hormone activity,function,28,21
PF06955,GO:0048046,apoplast,component,1,1523
PF06957,GO:0030126,COPI vesicle coat,component,3,1524
PF06963,GO:0005381,iron ion transmembrane transporter activity,function,2,1525
PF06964,GO:0046373,L-arabinose metabolic process,process,3,1034
PF06965,GO:0006885,regulation of pH,process,1,1526
PF06971,GO:0051775,response to redox state,process,1,1527
PF06973,GO:0016879,"ligase activity, forming carbon-nitrogen bonds",function,4,1512
PF06984,GO:0005761,mitochondrial ribosome,component,2,1528
PF06988,GO:0009399,nitrogen fixation,process,7,947
PF06989,GO:0005737,cytoplasm,component,103,370
PF06990,GO:0001733,galactosylceramide sulfotransferase activity,function,1,1529
PF06992,GO:0006270,DNA replication initiation,process,5,378
PF06994,GO:0030216,keratinocyte differentiation,process,1,1530
PF07012,GO:0009289,pilus,component,8,46
PF07022,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF07038,GO:0039526,perturbation by virus of host apoptosis,process,1,1531
PF07043,GO:0005886,plasma membrane,component,39,823
PF07057,GO:0016818,"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",function,6,1532
PF07058,GO:0007010,cytoskeleton organization,process,4,438
PF07062,GO:0016020,membrane,component,541,64
PF07063,GO:0016491,oxidoreductase activity,function,68,22
PF07074,GO:0006614,SRP-dependent cotranslational protein targeting to membrane,process,8,195
PF07086,GO:0007029,endoplasmic reticulum organization,process,1,1533
PF07088,GO:0005524,ATP binding,function,178,2
PF07095,GO:0016020,membrane,component,541,64
PF07109,GO:0046406,magnesium protoporphyrin IX methyltransferase activity,function,1,1534
PF07110,GO:0016491,oxidoreductase activity,function,68,22
PF07111,GO:0030154,cell differentiation,process,4,1509
PF07123,GO:0009507,chloroplast,component,3,1535
PF07124,GO:0019028,viral capsid,component,65,138
PF07127,GO:0046872,metal ion binding,function,48,38
PF07137,GO:0046422,violaxanthin de-epoxidase activity,function,1,1536
PF07140,GO:0060333,type II interferon-mediated signaling pathway,process,1,1537
PF07147,GO:0005739,mitochondrion,component,27,1358
PF07148,GO:0008643,carbohydrate transport,process,4,1264
PF07155,GO:0016020,membrane,component,541,64
PF07156,GO:0030328,prenylcysteine catabolic process,process,1,1538
PF07159,GO:0031267,small GTPase binding,function,7,986
PF07160,GO:0007059,chromosome segregation,process,6,1539
PF07163,GO:0045046,protein import into peroxisome membrane,process,1,1540
PF07167,GO:0042619,poly-hydroxybutyrate biosynthetic process,process,1,1541
PF07168,GO:0071705,nitrogen compound transport,process,2,661
PF07174,GO:0050840,extracellular matrix binding,function,1,1542
PF07175,GO:0031214,biomineral tissue development,process,1,1543
PF07178,GO:0019867,outer membrane,component,22,397
PF07180,GO:0006351,DNA-templated transcription,process,53,701
PF07194,GO:0004673,protein histidine kinase activity,function,8,851
PF07195,GO:0009288,bacterial-type flagellum,component,4,667
PF07201,GO:0046903,secretion,process,1,1544
PF07207,GO:0009507,chloroplast,component,3,1535
PF07212,GO:0004415,hyalurononglucosaminidase activity,function,2,566
PF07213,GO:0043548,phosphatidylinositol 3-kinase binding,function,1,1545
PF07221,GO:0016853,isomerase activity,function,9,454
PF07225,GO:0005739,mitochondrion,component,27,1358
PF07229,GO:0003677,DNA binding,function,320,19
PF07231,GO:0006952,defense response,process,23,149
PF07238,GO:0035438,cyclic-di-GMP binding,function,2,1546
PF07240,GO:0002376,immune system process,process,1,1547
PF07243,GO:0044423,virion component,component,16,368
PF07244,GO:0019867,outer membrane,component,22,397
PF07259,GO:0010951,negative regulation of endopeptidase activity,process,3,1548
PF07260,GO:0035435,phosphate ion transmembrane transport,process,1,1549
PF07263,GO:0030198,extracellular matrix organization,process,1,1550
PF07267,GO:0019028,viral capsid,component,65,138
PF07271,GO:0044650,adhesion of symbiont to host cell,process,1,1551
PF07284,GO:0019685,"photosynthesis, dark reaction",process,1,1552
PF07289,GO:0034464,BBSome,component,2,1553
PF07291,GO:0030416,methylamine metabolic process,process,1,1554
PF07294,GO:0005198,structural molecule activity,function,90,30
PF07297,GO:0019348,dolichol metabolic process,process,1,1555
PF07307,GO:0009234,menaquinone biosynthetic process,process,1,1556
PF07309,GO:0044781,bacterial-type flagellum organization,process,3,1174
PF07328,GO:0004519,endonuclease activity,function,25,356
PF07335,GO:0016977,chitosanase activity,function,2,501
PF07340,GO:0039695,DNA-templated viral transcription,process,1,1557
PF07347,GO:0042773,ATP synthesis coupled electron transport,process,1,1558
PF07348,GO:0009898,cytoplasmic side of plasma membrane,component,1,1559
PF07352,GO:0042262,DNA protection,process,2,1377
PF07355,GO:0050485,"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor",function,3,1560
PF07357,GO:0030701,NAD+-dinitrogen-reductase ADP-D-ribosyltransferase activity,function,1,1561
PF07359,GO:0042742,defense response to bacterium,process,23,591
PF07361,GO:0022900,electron transport chain,process,6,863
PF07365,GO:0030550,acetylcholine receptor inhibitor activity,function,3,1562
PF07366,GO:0030638,polyketide metabolic process,process,1,1563
PF07378,GO:1902209,negative regulation of bacterial-type flagellum assembly,process,1,1564
PF07382,GO:0030261,chromosome condensation,process,3,1167
PF07392,GO:0008285,negative regulation of cell population proliferation,process,2,1565
PF07402,GO:0016020,membrane,component,541,64
PF07404,GO:0000781,"chromosome, telomeric region",component,3,860
PF07412,GO:0006275,regulation of DNA replication,process,7,210
PF07415,GO:0019042,viral latency,process,1,1566
PF07417,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF07421,GO:0005184,neuropeptide hormone activity,function,7,1391
PF07425,GO:0005576,extracellular region,component,203,16
PF07426,GO:0061640,cytoskeleton-dependent cytokinesis,process,1,1567
PF07428,GO:0043386,mycotoxin biosynthetic process,process,2,1568
PF07429,GO:0036065,fucosylation,process,1,1569
PF07432,GO:0030527,structural constituent of chromatin,function,4,99
PF07440,GO:0005576,extracellular region,component,203,16
PF07442,GO:0005576,extracellular region,component,203,16
PF07448,GO:0046849,bone remodeling,process,1,1570
PF07460,GO:0003677,DNA binding,function,320,19
PF07462,GO:0016020,membrane,component,541,64
PF07463,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF07464,GO:0006869,lipid transport,process,10,1571
PF07465,GO:0015979,photosynthesis,process,41,135
PF07469,GO:0005634,nucleus,component,149,411
PF07473,GO:0005576,extracellular region,component,203,16
PF07475,GO:0006109,regulation of carbohydrate metabolic process,process,3,818
PF07477,GO:0045493,xylan catabolic process,process,3,1031
PF07478,GO:0008716,D-alanine-D-alanine ligase activity,function,1,1572
PF07479,GO:0047952,glycerol-3-phosphate dehydrogenase [NAD(P)+] activity,function,1,1573
PF07486,GO:0016787,hydrolase activity,function,35,65
PF07487,GO:0090630,activation of GTPase activity,process,1,1574
PF07488,GO:0045493,xylan catabolic process,process,3,1031
PF07491,GO:0032515,negative regulation of phosphoprotein phosphatase activity,process,1,1575
PF07492,GO:0005993,trehalose catabolic process,process,1,1576
PF07496,GO:0008270,zinc ion binding,function,101,229
PF07497,GO:0006353,DNA-templated transcription termination,process,2,1577
PF07498,GO:0006353,DNA-templated transcription termination,process,2,1577
PF07499,GO:0009379,Holliday junction helicase complex,component,1,1578
PF07500,GO:0006351,DNA-templated transcription,process,53,701
PF07503,GO:0008270,zinc ion binding,function,101,229
PF07508,GO:0000150,DNA strand exchange activity,function,4,112
PF07516,GO:0017038,protein import,process,3,374
PF07517,GO:0017038,protein import,process,3,374
PF07527,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF07531,GO:0006351,DNA-templated transcription,process,53,701
PF07533,GO:0005515,protein binding,function,122,10
PF07535,GO:0003676,nucleic acid binding,function,32,39
PF07536,GO:0004673,protein histidine kinase activity,function,8,851
PF07541,GO:0003743,translation initiation factor activity,function,12,1428
PF07542,GO:0043461,proton-transporting ATP synthase complex assembly,process,1,1579
PF07544,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF07545,GO:0005634,nucleus,component,149,411
PF07546,GO:0005515,protein binding,function,122,10
PF07548,GO:0019867,outer membrane,component,22,397
PF07552,GO:0031160,spore wall,component,1,1580
PF07557,GO:0045132,meiotic chromosome segregation,process,1,1581
PF07562,GO:0004930,G protein-coupled receptor activity,function,11,0
PF07565,GO:0008509,monoatomic anion transmembrane transporter activity,function,1,1582
PF07569,GO:0006338,chromatin remodeling,process,11,1219
PF07571,GO:0006367,transcription initiation at RNA polymerase II promoter,process,9,711
PF07573,GO:0042128,nitrate assimilation,process,1,1583
PF07574,GO:0030915,Smc5-Smc6 complex,component,1,1584
PF07578,GO:0008915,lipid-A-disaccharide synthase activity,function,2,846
PF07580,GO:0005618,cell wall,component,7,502
PF07645,GO:0005509,calcium ion binding,function,34,15
PF07646,GO:0005515,protein binding,function,122,10
PF07647,GO:0005515,protein binding,function,122,10
PF07648,GO:0005515,protein binding,function,122,10
PF07650,GO:0003723,RNA binding,function,118,6
PF07651,GO:0005543,phospholipid binding,function,2,1585
PF07652,GO:0004386,helicase activity,function,6,849
PF07653,GO:0005515,protein binding,function,122,10
PF07655,GO:0009297,pilus assembly,process,2,1586
PF07657,GO:0007219,Notch signaling pathway,process,5,1587
PF07660,GO:0019867,outer membrane,component,22,397
PF07663,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF07664,GO:0015093,ferrous iron transmembrane transporter activity,function,1,1588
PF07668,GO:0016020,membrane,component,541,64
PF07669,GO:0006304,DNA modification,process,3,1169
PF07677,GO:0005576,extracellular region,component,203,16
PF07678,GO:0005615,extracellular space,component,21,129
PF07684,GO:0030154,cell differentiation,process,4,1509
PF07685,GO:0003824,catalytic activity,function,50,132
PF07688,GO:0007623,circadian rhythm,process,3,1479
PF07689,GO:0048511,rhythmic process,process,1,1589
PF07690,GO:0022857,transmembrane transporter activity,function,25,34
PF07694,GO:0071555,cell wall organization,process,2,157
PF07700,GO:0020037,heme binding,function,26,17
PF07701,GO:0004383,guanylate cyclase activity,function,1,1590
PF07702,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF07706,GO:0009074,aromatic amino acid family catabolic process,process,1,1591
PF07710,GO:0051262,protein tetramerization,process,3,806
PF07711,GO:0004663,Rab geranylgeranyltransferase activity,function,1,1592
PF07713,GO:0006397,mRNA processing,process,11,491
PF07714,GO:0004672,protein kinase activity,function,6,28
PF07716,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF07718,GO:0030126,COPI vesicle coat,component,3,1524
PF07721,GO:0042802,identical protein binding,function,4,1593
PF07722,GO:0016787,hydrolase activity,function,35,65
PF07724,GO:0016887,ATP hydrolysis activity,function,15,1
PF07726,GO:0016887,ATP hydrolysis activity,function,15,1
PF07728,GO:0016887,ATP hydrolysis activity,function,15,1
PF07730,GO:0000155,phosphorelay sensor kinase activity,function,10,211
PF07731,GO:0005507,copper ion binding,function,17,54
PF07732,GO:0005507,copper ion binding,function,17,54
PF07733,GO:0008408,3'-5' exonuclease activity,function,6,1024
PF07740,GO:0008200,ion channel inhibitor activity,function,7,197
PF07743,GO:0051259,protein complex oligomerization,process,3,1594
PF07745,GO:0015926,glucosidase activity,function,1,1595
PF07748,GO:0006013,mannose metabolic process,process,3,1596
PF07749,GO:0005783,endoplasmic reticulum,component,13,1325
PF07757,GO:0008168,methyltransferase activity,function,37,63
PF07765,GO:0003779,actin binding,function,13,111
PF07766,GO:0043022,ribosome binding,function,4,1597
PF07776,GO:0008270,zinc ion binding,function,101,229
PF07778,GO:0034508,centromere complex assembly,process,2,1598
PF07780,GO:0006364,rRNA processing,process,23,458
PF07781,GO:0019028,viral capsid,component,65,138
PF07782,GO:0016020,membrane,component,541,64
PF07809,GO:0009968,negative regulation of signal transduction,process,1,1599
PF07810,GO:0016020,membrane,component,541,64
PF07813,GO:0042597,periplasmic space,component,13,1111
PF07817,GO:0016973,poly(A)+ mRNA export from nucleus,process,1,1600
PF07818,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF07819,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF07821,GO:0004556,alpha-amylase activity,function,2,1601
PF07822,GO:0019871,sodium channel inhibitor activity,function,8,1314
PF07823,GO:0004112,cyclic-nucleotide phosphodiesterase activity,function,1,1602
PF07825,GO:0006310,DNA recombination,process,25,386
PF07826,GO:0003937,IMP cyclohydrolase activity,function,2,1603
PF07827,GO:0016779,nucleotidyltransferase activity,function,8,600
PF07829,GO:0030550,acetylcholine receptor inhibitor activity,function,3,1562
PF07830,GO:0004721,phosphoprotein phosphatase activity,function,5,1225
PF07831,GO:0006213,pyrimidine nucleoside metabolic process,process,1,1604
PF07834,GO:0005096,GTPase activator activity,function,9,516
PF07836,GO:0016833,oxo-acid-lyase activity,function,1,1605
PF07837,GO:0005542,folic acid binding,function,2,903
PF07839,GO:0005516,calmodulin binding,function,10,671
PF07840,GO:0019217,regulation of fatty acid metabolic process,process,1,1606
PF07846,GO:0046870,cadmium ion binding,function,2,1607
PF07847,GO:0016702,"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen",function,5,144
PF07850,GO:0038023,signaling receptor activity,function,8,1217
PF07851,GO:0016020,membrane,component,541,64
PF07855,GO:0006914,autophagy,process,5,1127
PF07859,GO:0016787,hydrolase activity,function,35,65
PF07880,GO:0019076,viral release from host cell,process,4,1608
PF07881,GO:0008736,L-fucose isomerase activity,function,3,1609
PF07882,GO:0006004,fucose metabolic process,process,3,896
PF07890,GO:0006364,rRNA processing,process,23,458
PF07904,GO:0043189,H4/H2A histone acetyltransferase complex,component,1,1610
PF07912,GO:0005788,endoplasmic reticulum lumen,component,1,1611
PF07925,GO:0032774,RNA biosynthetic process,process,1,1612
PF07926,GO:0006606,protein import into nucleus,process,2,1613
PF07927,GO:0003729,mRNA binding,function,6,1614
PF07928,GO:0042147,"retrograde transport, endosome to Golgi",process,2,1615
PF07930,GO:0004177,aminopeptidase activity,function,3,674
PF07933,GO:0006897,endocytosis,process,3,1616
PF07934,GO:0008534,oxidized purine nucleobase lesion DNA N-glycosylase activity,function,1,1617
PF07936,GO:0042151,nematocyst,component,2,1618
PF07940,GO:0016829,lyase activity,function,20,268
PF07941,GO:0030955,potassium ion binding,function,2,1619
PF07942,GO:0008757,S-adenosylmethionine-dependent methyltransferase activity,function,4,1364
PF07943,GO:0009002,serine-type D-Ala-D-Ala carboxypeptidase activity,function,2,292
PF07945,GO:0005576,extracellular region,component,203,16
PF07946,GO:0032469,endoplasmic reticulum calcium ion homeostasis,process,1,1620
PF07947,GO:0016020,membrane,component,541,64
PF07952,GO:0008320,protein transmembrane transporter activity,function,1,1621
PF07953,GO:0005576,extracellular region,component,203,16
PF07955,GO:0005739,mitochondrion,component,27,1358
PF07959,GO:0016772,"transferase activity, transferring phosphorus-containing groups",function,7,100
PF07961,GO:0032979,protein insertion into mitochondrial inner membrane from matrix,process,1,1622
PF07962,GO:0031297,replication fork processing,process,2,1623
PF07964,GO:0007131,reciprocal meiotic recombination,process,5,1010
PF07966,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF07967,GO:0008270,zinc ion binding,function,101,229
PF07968,GO:0051715,cytolysis in another organism,process,2,1624
PF07972,GO:0036211,protein modification process,process,6,721
PF07973,GO:0043039,tRNA aminoacylation,process,3,287
PF07975,GO:0006281,DNA repair,process,37,307
PF07984,GO:1990817,poly(A) RNA polymerase activity,function,3,966
PF07988,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF07989,GO:0005815,microtubule organizing center,component,2,1625
PF07992,GO:0016491,oxidoreductase activity,function,68,22
PF07994,GO:0006021,inositol biosynthetic process,process,1,1626
PF07998,GO:0008233,peptidase activity,function,18,349
PF08001,GO:0044167,host cell endoplasmic reticulum membrane,component,1,1627
PF08013,GO:0005975,carbohydrate metabolic process,process,70,55
PF08015,GO:0000772,mating pheromone activity,function,5,1072
PF08018,GO:0098542,defense response to other organism,process,4,1628
PF08019,GO:0016020,membrane,component,541,64
PF08022,GO:0016491,oxidoreductase activity,function,68,22
PF08023,GO:0006952,defense response,process,23,149
PF08024,GO:0098542,defense response to other organism,process,4,1628
PF08025,GO:0019836,hemolysis by symbiont of host erythrocytes,process,6,728
PF08026,GO:0042381,hemolymph coagulation,process,3,662
PF08027,GO:0045735,nutrient reservoir activity,function,3,552
PF08029,GO:0003879,ATP phosphoribosyltransferase activity,function,2,567
PF08030,GO:0016491,oxidoreductase activity,function,68,22
PF08031,GO:0050660,flavin adenine dinucleotide binding,function,11,554
PF08032,GO:0008168,methyltransferase activity,function,37,63
PF08037,GO:0019953,sexual reproduction,process,3,1208
PF08038,GO:0030150,protein import into mitochondrial matrix,process,3,1629
PF08039,GO:0005739,mitochondrion,component,27,1358
PF08040,GO:0005739,mitochondrion,component,27,1358
PF08041,GO:0009512,cytochrome b6f complex,component,4,799
PF08042,GO:0018189,pyrroloquinoline quinone biosynthetic process,process,1,1630
PF08043,GO:0030054,cell junction,component,1,1631
PF08046,GO:0009082,branched-chain amino acid biosynthetic process,process,2,1632
PF08047,GO:0000105,histidine biosynthetic process,process,6,361
PF08050,GO:0046677,response to antibiotic,process,10,978
PF08052,GO:0019856,pyrimidine nucleobase biosynthetic process,process,1,1633
PF08053,GO:0031556,transcriptional attenuation by ribosome,process,2,1634
PF08054,GO:0009098,leucine biosynthetic process,process,2,1635
PF08057,GO:0046677,response to antibiotic,process,10,978
PF08063,GO:0008270,zinc ion binding,function,101,229
PF08064,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF08066,GO:0000176,nuclear exosome (RNase complex),component,1,1637
PF08069,GO:0005840,ribosome,component,86,74
PF08072,GO:0016818,"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",function,6,1532
PF08082,GO:0000398,"mRNA splicing, via spliceosome",process,12,979
PF08083,GO:0000398,"mRNA splicing, via spliceosome",process,12,979
PF08085,GO:0009636,response to toxic substance,process,2,1638
PF08086,GO:0019870,potassium channel inhibitor activity,function,3,1639
PF08089,GO:0090729,toxin activity,function,13,410
PF08091,GO:0005576,extracellular region,component,203,16
PF08092,GO:0019871,sodium channel inhibitor activity,function,8,1314
PF08093,GO:0019871,sodium channel inhibitor activity,function,8,1314
PF08094,GO:0019871,sodium channel inhibitor activity,function,8,1314
PF08095,GO:0005576,extracellular region,component,203,16
PF08096,GO:0005576,extracellular region,component,203,16
PF08097,GO:0005576,extracellular region,component,203,16
PF08098,GO:0042151,nematocyst,component,2,1618
PF08099,GO:0019855,calcium channel inhibitor activity,function,3,1437
PF08100,GO:0046983,protein dimerization activity,function,22,4
PF08102,GO:0044179,hemolysis in another organism,process,2,1414
PF08103,GO:0005576,extracellular region,component,203,16
PF08104,GO:0045087,innate immune response,process,3,1640
PF08105,GO:0019732,antifungal humoral response,process,1,1641
PF08106,GO:0042381,hemolymph coagulation,process,3,662
PF08107,GO:0042742,defense response to bacterium,process,23,591
PF08108,GO:0042742,defense response to bacterium,process,23,591
PF08110,GO:0019836,hemolysis by symbiont of host erythrocytes,process,6,728
PF08111,GO:0005184,neuropeptide hormone activity,function,7,1391
PF08112,GO:0042626,ATPase-coupled transmembrane transporter activity,function,2,1459
PF08114,GO:0050790,regulation of catalytic activity,process,2,1642
PF08115,GO:0005576,extracellular region,component,203,16
PF08116,GO:0005576,extracellular region,component,203,16
PF08117,GO:0019855,calcium channel inhibitor activity,function,3,1437
PF08118,GO:0000001,mitochondrion inheritance,process,1,1643
PF08119,GO:0019870,potassium channel inhibitor activity,function,3,1639
PF08120,GO:0019870,potassium channel inhibitor activity,function,3,1639
PF08121,GO:0030550,acetylcholine receptor inhibitor activity,function,3,1562
PF08122,GO:0022900,electron transport chain,process,6,863
PF08123,GO:0031151,histone H3K79 methyltransferase activity,function,1,1644
PF08125,GO:0016491,oxidoreductase activity,function,68,22
PF08126,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF08127,GO:0050790,regulation of catalytic activity,process,2,1642
PF08131,GO:0005576,extracellular region,component,203,16
PF08133,GO:0050792,regulation of viral process,process,1,1645
PF08136,GO:0006412,translation,process,91,83
PF08137,GO:0008285,negative regulation of cell population proliferation,process,2,1565
PF08138,GO:0046008,"regulation of female receptivity, post-mating",process,1,1646
PF08140,GO:0042302,structural constituent of cuticle,function,4,528
PF08141,GO:0042601,endospore-forming forespore,component,4,1647
PF08142,GO:0042254,ribosome biogenesis,process,7,1183
PF08144,GO:0003723,RNA binding,function,118,6
PF08145,GO:0006364,rRNA processing,process,23,458
PF08147,GO:0003724,RNA helicase activity,function,4,340
PF08150,GO:0016020,membrane,component,541,64
PF08152,GO:0004386,helicase activity,function,6,849
PF08157,GO:0005634,nucleus,component,149,411
PF08159,GO:0005634,nucleus,component,149,411
PF08163,GO:0006303,double-strand break repair via nonhomologous end joining,process,5,858
PF08164,GO:0005634,nucleus,component,149,411
PF08165,GO:0016020,membrane,component,541,64
PF08168,GO:0005634,nucleus,component,149,411
PF08172,GO:0006891,intra-Golgi vesicle-mediated transport,process,2,1648
PF08175,GO:0042601,endospore-forming forespore,component,4,1647
PF08176,GO:0042601,endospore-forming forespore,component,4,1647
PF08177,GO:0042601,endospore-forming forespore,component,4,1647
PF08179,GO:0030435,sporulation resulting in formation of a cellular spore,process,4,1103
PF08181,GO:1900192,positive regulation of single-species biofilm formation,process,1,1649
PF08184,GO:0042302,structural constituent of cuticle,function,4,528
PF08187,GO:0005184,neuropeptide hormone activity,function,7,1391
PF08188,GO:0000228,nuclear chromosome,component,2,1248
PF08193,GO:0031011,Ino80 complex,component,4,1239
PF08194,GO:0006952,defense response,process,23,149
PF08198,GO:0003677,DNA binding,function,320,19
PF08202,GO:0000444,MIS12/MIND type complex,component,2,1093
PF08208,GO:0006360,transcription by RNA polymerase I,process,3,1305
PF08210,GO:0016814,"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines",function,1,1650
PF08211,GO:0004126,cytidine deaminase activity,function,1,1651
PF08214,GO:0004402,histone acetyltransferase activity,function,4,624
PF08218,GO:0008771,[citrate (pro-3S)-lyase] ligase activity,function,1,1652
PF08219,GO:0005741,mitochondrial outer membrane,component,4,525
PF08220,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF08225,GO:0006952,defense response,process,23,149
PF08228,GO:0008033,tRNA processing,process,8,632
PF08234,GO:0031262,Ndc80 complex,component,3,1050
PF08236,GO:0034968,histone lysine methylation,process,2,1653
PF08241,GO:0008757,S-adenosylmethionine-dependent methyltransferase activity,function,4,1364
PF08245,GO:0016881,acid-amino acid ligase activity,function,3,446
PF08247,GO:0009877,nodulation,process,1,1654
PF08254,GO:0009088,threonine biosynthetic process,process,1,1655
PF08256,GO:0006952,defense response,process,23,149
PF08264,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF08267,GO:0003871,5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,function,2,589
PF08272,GO:0003917,"DNA topoisomerase type I (single strand cut, ATP-independent) activity",function,3,373
PF08273,GO:0003896,DNA primase activity,function,4,614
PF08278,GO:0006269,"DNA replication, synthesis of RNA primer",process,4,635
PF08281,GO:0016987,sigma factor activity,function,5,60
PF08283,GO:0016888,"endodeoxyribonuclease activity, producing 5'-phosphomonoesters",function,2,771
PF08285,GO:0006486,protein glycosylation,process,9,1203
PF08287,GO:0005876,spindle microtubule,component,2,1656
PF08288,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF08289,GO:0005198,structural molecule activity,function,90,30
PF08290,GO:0005198,structural molecule activity,function,90,30
PF08294,GO:0005744,TIM23 mitochondrial import inner membrane translocase complex,component,1,1657
PF08297,GO:0030515,snoRNA binding,function,3,1137
PF08299,GO:0006270,DNA replication initiation,process,5,378
PF08300,GO:0008270,zinc ion binding,function,101,229
PF08302,GO:0003972,RNA ligase (ATP) activity,function,3,1658
PF08303,GO:0003972,RNA ligase (ATP) activity,function,3,1658
PF08314,GO:0006890,"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum",process,4,1659
PF08320,GO:0006506,GPI anchor biosynthetic process,process,10,1117
PF08326,GO:0003989,acetyl-CoA carboxylase activity,function,3,1660
PF08328,GO:0004018,"N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity",function,1,1661
PF08329,GO:0004568,chitinase activity,function,2,78
PF08332,GO:0004683,calmodulin-dependent protein kinase activity,function,1,1662
PF08335,GO:0016779,nucleotidyltransferase activity,function,8,600
PF08336,GO:0004656,procollagen-proline 4-dioxygenase activity,function,1,1663
PF08337,GO:0017154,semaphorin receptor activity,function,2,1664
PF08352,GO:0015833,peptide transport,process,2,1665
PF08354,GO:0004318,enoyl-[acyl-carrier-protein] reductase (NADH) activity,function,1,1666
PF08360,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF08361,GO:0003677,DNA binding,function,320,19
PF08362,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF08367,GO:0006508,proteolysis,process,84,345
PF08369,GO:0015995,chlorophyll biosynthetic process,process,2,1667
PF08375,GO:0042176,regulation of protein catabolic process,process,1,1668
PF08392,GO:0006633,fatty acid biosynthetic process,process,8,790
PF08395,GO:0050909,sensory perception of taste,process,2,1669
PF08396,GO:0090729,toxin activity,function,13,410
PF08397,GO:0007009,plasma membrane organization,process,1,1670
PF08398,GO:0005198,structural molecule activity,function,90,30
PF08401,GO:0003697,single-stranded DNA binding,function,14,189
PF08402,GO:0043190,ATP-binding cassette (ABC) transporter complex,component,4,350
PF08405,GO:0044419,biological process involved in interspecies interaction between organisms,process,2,1671
PF08407,GO:0004100,chitin synthase activity,function,2,1672
PF08408,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF08411,GO:0008310,single-stranded DNA 3'-5' DNA exonuclease activity,function,1,1673
PF08414,GO:0050664,"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor",function,1,1674
PF08416,GO:0005515,protein binding,function,122,10
PF08417,GO:0010277,chlorophyllide a oxygenase [overall] activity,function,1,1675
PF08430,GO:0019904,protein domain specific binding,function,2,1469
PF08436,GO:0005515,protein binding,function,122,10
PF08437,GO:0008918,lipopolysaccharide 3-alpha-galactosyltransferase activity,function,1,1676
PF08440,GO:0018144,RNA-protein covalent cross-linking,process,1,1677
PF08445,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF08446,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF08447,GO:0005515,protein binding,function,122,10
PF08449,GO:0055085,transmembrane transport,process,55,151
PF08451,GO:0005615,extracellular space,component,21,129
PF08452,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF08459,GO:0009381,excinuclease ABC activity,function,1,1678
PF08463,GO:0006304,DNA modification,process,3,1169
PF08465,GO:0004797,thymidine kinase activity,function,3,124
PF08467,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF08468,GO:0008990,rRNA (guanine-N2-)-methyltransferase activity,function,2,1679
PF08469,GO:0017111,ribonucleoside triphosphate phosphatase activity,function,10,367
PF08471,GO:0004748,"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor",function,2,148
PF08472,GO:0050307,sucrose-phosphate phosphatase activity,function,1,1680
PF08476,GO:0016791,phosphatase activity,function,8,115
PF08485,GO:0003978,UDP-glucose 4-epimerase activity,function,1,1681
PF08488,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF08490,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF08491,GO:0004506,squalene monooxygenase activity,function,1,1682
PF08492,GO:0048500,signal recognition particle,component,3,642
PF08493,GO:0045122,aflatoxin biosynthetic process,process,1,1683
PF08494,GO:0016818,"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",function,6,1532
PF08496,GO:0004252,serine-type endopeptidase activity,function,29,35
PF08498,GO:0006694,steroid biosynthetic process,process,2,1684
PF08500,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF08501,GO:0004764,shikimate 3-dehydrogenase (NADP+) activity,function,1,1685
PF08502,GO:0003852,2-isopropylmalate synthase activity,function,1,1686
PF08503,GO:0047200,tetrahydrodipicolinate N-acetyltransferase activity,function,1,1687
PF08506,GO:0006886,intracellular protein transport,process,31,1029
PF08509,GO:0006171,cAMP biosynthetic process,process,3,470
PF08513,GO:0005515,protein binding,function,122,10
PF08515,GO:0004675,transmembrane receptor protein serine/threonine kinase activity,function,2,382
PF08517,GO:0003723,RNA binding,function,118,6
PF08519,GO:0005663,DNA replication factor C complex,component,1,1688
PF08526,GO:0005509,calcium ion binding,function,34,15
PF08527,GO:0005509,calcium ion binding,function,34,15
PF08529,GO:0031554,regulation of termination of DNA-templated transcription,process,3,1689
PF08530,GO:0008239,dipeptidyl-peptidase activity,function,3,1690
PF08532,GO:0004565,beta-galactosidase activity,function,4,1691
PF08533,GO:0006012,galactose metabolic process,process,3,1692
PF08534,GO:0016491,oxidoreductase activity,function,68,22
PF08536,GO:0003697,single-stranded DNA binding,function,14,189
PF08540,GO:0004421,hydroxymethylglutaryl-CoA synthase activity,function,1,1693
PF08545,GO:0004315,3-oxoacyl-[acyl-carrier-protein] synthase activity,function,1,1694
PF08548,GO:0005615,extracellular space,component,21,129
PF08549,GO:0006338,chromatin remodeling,process,11,1219
PF08551,GO:0006890,"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum",process,4,1659
PF08552,GO:0006673,inositol phosphoceramide metabolic process,process,1,1695
PF08558,GO:0042803,protein homodimerization activity,function,3,1696
PF08559,GO:0071630,nuclear protein quality control by the ubiquitin-proteasome system,process,1,1697
PF08563,GO:0005515,protein binding,function,122,10
PF08566,GO:0001405,"PAM complex, Tim23 associated import motor",component,1,1698
PF08573,GO:0006281,DNA repair,process,37,307
PF08584,GO:0030677,ribonuclease P complex,component,3,629
PF08586,GO:0016586,RSC-type complex,component,2,1699
PF08587,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF08589,GO:0140580,mitochondrion autophagosome adaptor activity,function,1,1700
PF08597,GO:0005852,eukaryotic translation initiation factor 3 complex,component,4,1284
PF08602,GO:0005743,mitochondrial inner membrane,component,15,1701
PF08603,GO:0007010,cytoskeleton organization,process,4,438
PF08612,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF08613,GO:0000079,regulation of cyclin-dependent protein serine/threonine kinase activity,process,1,1702
PF08615,GO:0032299,ribonuclease H2 complex,component,1,1703
PF08618,GO:0003714,transcription corepressor activity,function,3,1510
PF08619,GO:0015385,sodium:proton antiporter activity,function,2,1467
PF08622,GO:0006979,response to oxidative stress,process,3,61
PF08625,GO:0032040,small-subunit processome,component,5,1098
PF08631,GO:0051321,meiotic cell cycle,process,2,1704
PF08633,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF08634,GO:0000959,mitochondrial RNA metabolic process,process,1,1705
PF08636,GO:0070072,vacuolar proton-transporting V-type ATPase complex assembly,process,4,1706
PF08638,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF08640,GO:0000462,"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",process,2,1707
PF08641,GO:0000070,mitotic sister chromatid segregation,process,1,1708
PF08642,GO:0016575,histone deacetylation,process,2,1709
PF08648,GO:0008380,RNA splicing,process,3,871
PF08649,GO:0072686,mitotic spindle,component,7,1710
PF08650,GO:0008608,attachment of spindle microtubules to kinetochore,process,6,1711
PF08651,GO:0000278,mitotic cell cycle,process,5,1379
PF08653,GO:0008608,attachment of spindle microtubules to kinetochore,process,6,1711
PF08654,GO:0000278,mitotic cell cycle,process,5,1379
PF08655,GO:0008608,attachment of spindle microtubules to kinetochore,process,6,1711
PF08656,GO:0008608,attachment of spindle microtubules to kinetochore,process,6,1711
PF08657,GO:0005876,spindle microtubule,component,2,1656
PF08658,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF08660,GO:0006488,dolichol-linked oligosaccharide biosynthetic process,process,3,1195
PF08661,GO:0006310,DNA recombination,process,25,386
PF08671,GO:0046983,protein dimerization activity,function,22,4
PF08675,GO:0004535,poly(A)-specific ribonuclease activity,function,1,1712
PF08676,GO:0006298,mismatch repair,process,8,1071
PF08683,GO:0008017,microtubule binding,function,17,712
PF08685,GO:0004222,metalloendopeptidase activity,function,25,511
PF08688,GO:0051015,actin filament binding,function,4,375
PF08689,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF08692,GO:0005739,mitochondrion,component,27,1358
PF08694,GO:0061657,UFM1 conjugating enzyme activity,function,1,1713
PF08702,GO:0030168,platelet activation,process,1,1714
PF08703,GO:0004435,phosphatidylinositol phospholipase C activity,function,2,174
PF08707,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF08710,GO:0019079,viral genome replication,process,13,283
PF08714,GO:0016840,carbon-nitrogen lyase activity,function,1,1715
PF08715,GO:0008234,cysteine-type peptidase activity,function,9,45
PF08717,GO:0008242,omega peptidase activity,function,1,1716
PF08718,GO:0120009,intermembrane lipid transfer,process,1,1717
PF08720,GO:0046789,host cell surface receptor binding,function,6,184
PF08727,GO:0017111,ribonucleoside triphosphate phosphatase activity,function,10,367
PF08731,GO:0010106,cellular response to iron ion starvation,process,1,1718
PF08744,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF08752,GO:0030126,COPI vesicle coat,component,3,1524
PF08755,GO:0003677,DNA binding,function,320,19
PF08767,GO:0005049,nuclear export signal receptor activity,function,1,1719
PF08769,GO:0042173,regulation of sporulation resulting in formation of a cellular spore,process,1,1720
PF08771,GO:0044877,protein-containing complex binding,function,2,1721
PF08774,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF08777,GO:0003723,RNA binding,function,118,6
PF08782,GO:0046332,SMAD binding,function,1,1722
PF08783,GO:0008270,zinc ion binding,function,101,229
PF08797,GO:0016818,"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",function,6,1532
PF08804,GO:0003697,single-stranded DNA binding,function,14,189
PF08815,GO:0016922,nuclear receptor binding,function,1,1723
PF08825,GO:0019781,NEDD8 activating enzyme activity,function,1,1724
PF08826,GO:0006468,protein phosphorylation,process,16,188
PF08831,GO:0042289,MHC class II protein binding,function,2,1725
PF08845,GO:0016070,RNA metabolic process,process,4,492
PF08880,GO:0005634,nucleus,component,149,411
PF08911,GO:0005643,nuclear pore,component,7,1726
PF08912,GO:0031267,small GTPase binding,function,7,986
PF08915,GO:0004829,threonine-tRNA ligase activity,function,1,1727
PF08917,GO:0005026,"transforming growth factor beta receptor activity, type II",function,1,1728
PF08918,GO:0018106,peptidyl-histidine phosphorylation,process,2,1729
PF08919,GO:0004715,non-membrane spanning protein tyrosine kinase activity,function,1,1730
PF08923,GO:0032006,regulation of TOR signaling,process,1,1731
PF08925,GO:0005634,nucleus,component,149,411
PF08926,GO:0006468,protein phosphorylation,process,16,188
PF08935,GO:0019030,icosahedral viral capsid,component,1,1732
PF08941,GO:0061630,ubiquitin protein ligase activity,function,7,1733
PF08943,GO:0050498,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated",function,1,1734
PF08951,GO:0030153,bacteriocin immunity,process,8,1496
PF08961,GO:0006914,autophagy,process,5,1127
PF08964,GO:0098609,cell-cell adhesion,process,1,1735
PF08990,GO:0016740,transferase activity,function,18,291
PF08992,GO:0016638,"oxidoreductase activity, acting on the CH-NH2 group of donors",function,3,904
PF08996,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF08997,GO:0006122,"mitochondrial electron transport, ubiquinol to cytochrome c",process,5,735
PF08998,GO:0031342,negative regulation of cell killing,process,1,1736
PF09000,GO:0043022,ribosome binding,function,4,1597
PF09003,GO:0008907,integrase activity,function,2,886
PF09004,GO:0016706,2-oxoglutarate-dependent dioxygenase activity,function,3,1319
PF09005,GO:0003676,nucleic acid binding,function,32,39
PF09009,GO:0047286,NAD+-diphthamide ADP-ribosyltransferase activity,function,1,1737
PF09010,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF09013,GO:0006470,protein dephosphorylation,process,3,40
PF09015,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09017,GO:0003810,protein-glutamine gamma-glutamyltransferase activity,function,3,1738
PF09019,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09020,GO:0050765,negative regulation of phagocytosis,process,1,1739
PF09025,GO:0030257,type III protein secretion system complex,component,1,1740
PF09026,GO:0003682,chromatin binding,function,4,520
PF09028,GO:0008233,peptidase activity,function,18,349
PF09029,GO:0006778,porphyrin-containing compound metabolic process,process,1,1741
PF09030,GO:0000123,histone acetyltransferase complex,component,2,1742
PF09034,GO:0043123,positive regulation of canonical NF-kappaB signal transduction,process,2,1743
PF09036,GO:0005096,GTPase activator activity,function,9,516
PF09040,GO:0008900,P-type potassium:proton transporter activity,function,1,1744
PF09044,GO:0005576,extracellular region,component,203,16
PF09048,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF09055,GO:0016209,antioxidant activity,function,2,231
PF09057,GO:0006919,activation of cysteine-type endopeptidase activity involved in apoptotic process,process,2,1745
PF09061,GO:0016788,"hydrolase activity, acting on ester bonds",function,15,255
PF09064,GO:0004888,transmembrane signaling receptor activity,function,4,1746
PF09066,GO:0030131,clathrin adaptor complex,component,2,743
PF09074,GO:0000794,condensed nuclear chromosome,component,2,1747
PF09077,GO:0006313,DNA transposition,process,13,1056
PF09085,GO:0007155,cell adhesion,process,28,363
PF09088,GO:0016070,RNA metabolic process,process,4,492
PF09089,GO:0098024,"virus tail, fiber",component,1,1748
PF09090,GO:0016070,RNA metabolic process,process,4,492
PF09095,GO:0030246,carbohydrate binding,function,20,59
PF09096,GO:0098025,"virus tail, baseplate",component,1,1749
PF09103,GO:0000724,double-strand break repair via homologous recombination,process,2,1750
PF09106,GO:0001514,selenocysteine incorporation,process,2,1751
PF09107,GO:0001514,selenocysteine incorporation,process,2,1751
PF09110,GO:0031491,nucleosome binding,function,1,1752
PF09111,GO:0006338,chromatin remodeling,process,11,1219
PF09115,GO:0009360,DNA polymerase III complex,component,5,271
PF09116,GO:0039693,viral DNA genome replication,process,4,1497
PF09117,GO:0045926,negative regulation of growth,process,1,1753
PF09119,GO:0005615,extracellular space,component,21,129
PF09126,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09127,GO:0008237,metallopeptidase activity,function,5,510
PF09128,GO:0005085,guanyl-nucleotide exchange factor activity,function,8,244
PF09138,GO:0034227,tRNA thio-modification,process,2,1754
PF09139,GO:0004605,phosphatidate cytidylyltransferase activity,function,1,1755
PF09141,GO:0001726,ruffle,component,1,1756
PF09142,GO:0009451,RNA modification,process,5,319
PF09150,GO:0016037,light absorption,process,1,1757
PF09153,GO:0005737,cytoplasm,component,103,370
PF09154,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF09157,GO:0009982,pseudouridine synthase activity,function,5,417
PF09162,GO:0006406,mRNA export from nucleus,process,4,1758
PF09165,GO:0008121,ubiquinol-cytochrome-c reductase activity,function,3,887
PF09166,GO:0042167,heme catabolic process,process,1,1759
PF09167,GO:0005615,extracellular space,component,21,129
PF09168,GO:0008239,dipeptidyl-peptidase activity,function,3,1690
PF09171,GO:0016799,"hydrolase activity, hydrolyzing N-glycosyl compounds",function,3,425
PF09172,GO:0005319,lipid transporter activity,function,4,490
PF09174,GO:0016480,negative regulation of transcription by RNA polymerase III,process,1,1760
PF09175,GO:0005319,lipid transporter activity,function,4,490
PF09177,GO:0048193,Golgi vesicle transport,process,1,1761
PF09179,GO:0016879,"ligase activity, forming carbon-nitrogen bonds",function,4,1512
PF09180,GO:0006433,prolyl-tRNA aminoacylation,process,2,1762
PF09181,GO:0006433,prolyl-tRNA aminoacylation,process,2,1762
PF09182,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF09184,GO:0030289,protein phosphatase 4 complex,component,1,1763
PF09187,GO:0044030,regulation of DNA methylation,process,1,1764
PF09190,GO:0004817,cysteine-tRNA ligase activity,function,1,1765
PF09194,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09195,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09197,GO:0003677,DNA binding,function,320,19
PF09198,GO:0099018,evasion by virus of host restriction-modification system,process,1,1766
PF09201,GO:0005515,protein binding,function,122,10
PF09202,GO:0006468,protein phosphorylation,process,16,188
PF09204,GO:0015643,toxic substance binding,function,6,479
PF09206,GO:0031221,arabinan metabolic process,process,1,1767
PF09207,GO:0008219,cell death,process,1,1768
PF09208,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09213,GO:0019956,chemokine binding,function,1,1769
PF09222,GO:0044406,adhesion of symbiont to host,process,1,1770
PF09223,GO:0008270,zinc ion binding,function,101,229
PF09226,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09228,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF09229,GO:0001671,ATPase activator activity,function,3,1068
PF09230,GO:0006309,apoptotic DNA fragmentation,process,1,1771
PF09231,GO:0005198,structural molecule activity,function,90,30
PF09236,GO:0030218,erythrocyte differentiation,process,1,1772
PF09238,GO:0002532,production of molecular mediator involved in inflammatory response,process,1,1773
PF09239,GO:0003918,"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity",function,4,92
PF09242,GO:0050660,flavin adenine dinucleotide binding,function,11,554
PF09243,GO:0008168,methyltransferase activity,function,37,63
PF09246,GO:0003723,RNA binding,function,118,6
PF09249,GO:0004810,CCA tRNA nucleotidyltransferase activity,function,2,809
PF09252,GO:0005615,extracellular space,component,21,129
PF09254,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09258,GO:0016757,glycosyltransferase activity,function,16,218
PF09259,GO:0002682,regulation of immune system process,process,1,1774
PF09260,GO:0004556,alpha-amylase activity,function,2,1601
PF09261,GO:0006013,mannose metabolic process,process,3,1596
PF09262,GO:0007031,peroxisome organization,process,2,1252
PF09264,GO:0033691,sialic acid binding,function,1,1775
PF09265,GO:0009690,cytokinin metabolic process,process,1,1776
PF09266,GO:0003916,DNA topoisomerase activity,function,5,415
PF09268,GO:0030132,clathrin coat of coated pit,component,2,391
PF09269,GO:0000166,nucleotide binding,function,30,57
PF09270,GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding,function,1,1777
PF09271,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF09272,GO:0070008,serine-type exopeptidase activity,function,6,1349
PF09280,GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process,process,1,1778
PF09281,GO:0001882,nucleoside binding,function,1,1779
PF09284,GO:0016837,"carbon-oxygen lyase activity, acting on polysaccharides",function,2,1780
PF09285,GO:0043043,peptide biosynthetic process,process,1,1781
PF09286,GO:0008236,serine-type peptidase activity,function,7,33
PF09289,GO:0005515,protein binding,function,122,10
PF09290,GO:0008774,acetaldehyde dehydrogenase (acetylating) activity,function,1,1782
PF09296,GO:0016787,hydrolase activity,function,35,65
PF09297,GO:0016787,hydrolase activity,function,35,65
PF09298,GO:0009072,aromatic amino acid metabolic process,process,1,1783
PF09300,GO:0019028,viral capsid,component,65,138
PF09302,GO:0006302,double-strand break repair,process,5,1144
PF09307,GO:0042289,MHC class II protein binding,function,2,1725
PF09308,GO:0016791,phosphatase activity,function,8,115
PF09317,GO:0033539,fatty acid beta-oxidation using acyl-CoA dehydrogenase,process,1,1784
PF09326,GO:0016651,"oxidoreductase activity, acting on NAD(P)H",function,2,158
PF09328,GO:0046938,phytochelatin biosynthetic process,process,2,1785
PF09329,GO:0006260,DNA replication,process,57,300
PF09330,GO:0050660,flavin adenine dinucleotide binding,function,11,554
PF09334,GO:0006418,tRNA aminoacylation for protein translation,process,10,56
PF09338,GO:0050485,"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor",function,3,1560
PF09339,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF09340,GO:0000123,histone acetyltransferase complex,component,2,1742
PF09360,GO:0043231,intracellular membrane-bounded organelle,component,2,1786
PF09363,GO:0016832,aldehyde-lyase activity,function,3,405
PF09367,GO:0017009,protein-phycocyanobilin linkage,process,2,1423
PF09377,GO:0042254,ribosome biogenesis,process,7,1183
PF09382,GO:0043138,3'-5' DNA helicase activity,function,2,1787
PF09384,GO:0005730,nucleolus,component,5,1499
PF09388,GO:0043937,regulation of sporulation,process,1,1788
PF09392,GO:0015031,protein transport,process,20,156
PF09396,GO:0007596,blood coagulation,process,3,1406
PF09398,GO:0034453,microtubule anchoring,process,1,1789
PF09401,GO:0019079,viral genome replication,process,13,283
PF09405,GO:0035145,exon-exon junction complex,component,2,864
PF09412,GO:0004521,RNA endonuclease activity,function,6,223
PF09415,GO:0051382,kinetochore assembly,process,4,1373
PF09416,GO:0000184,"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",process,3,1790
PF09419,GO:0008962,phosphatidylglycerophosphatase activity,function,2,1206
PF09421,GO:0007623,circadian rhythm,process,3,1479
PF09427,GO:0032933,SREBP signaling pathway,process,1,1791
PF09429,GO:0006396,RNA processing,process,18,535
PF09432,GO:0000446,nucleoplasmic THO complex,component,1,1792
PF09445,GO:0001510,RNA methylation,process,1,1793
PF09446,GO:0070072,vacuolar proton-transporting V-type ATPase complex assembly,process,4,1706
PF09447,GO:0000776,kinetochore,component,7,1794
PF09452,GO:0032509,endosome transport via multivesicular body sorting pathway,process,2,1097
PF09456,GO:0018106,peptidyl-histidine phosphorylation,process,2,1729
PF09458,GO:0030246,carbohydrate binding,function,20,59
PF09459,GO:0020037,heme binding,function,26,17
PF09462,GO:0031297,replication fork processing,process,2,1623
PF09472,GO:0030269,tetrahydromethanopterin S-methyltransferase activity,function,6,1154
PF09478,GO:0030246,carbohydrate binding,function,20,59
PF09480,GO:0016020,membrane,component,541,64
PF09488,GO:0051479,mannosylglycerate biosynthetic process,process,1,1795
PF09494,GO:0033557,Slx1-Slx4 complex,component,1,1796
PF09496,GO:0034508,centromere complex assembly,process,2,1598
PF09497,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF09505,GO:0015948,methanogenesis,process,11,791
PF09506,GO:0050530,glucosylglycerol 3-phosphatase activity,function,1,1797
PF09507,GO:0043625,delta DNA polymerase complex,component,1,1798
PF09510,GO:0016514,SWI/SNF complex,component,1,1799
PF09514,GO:0005634,nucleus,component,149,411
PF09515,GO:0015234,thiamine transmembrane transporter activity,function,1,1800
PF09519,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09520,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09521,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09553,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09564,GO:0090305,nucleic acid phosphodiester bond hydrolysis,process,3,1801
PF09567,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09568,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09570,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09571,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09572,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09573,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF09589,GO:0005615,extracellular space,component,21,129
PF09594,GO:0016758,hexosyltransferase activity,function,8,605
PF09596,GO:0016607,nuclear speck,component,1,1802
PF09604,GO:0043462,regulation of ATP-dependent activity,process,1,1803
PF09618,GO:0043571,maintenance of CRISPR repeat elements,process,4,1286
PF09637,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF09648,GO:0016020,membrane,component,541,64
PF09663,GO:0016812,"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides",function,1,1804
PF09668,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF09692,GO:0033167,ARC complex,component,1,1805
PF09696,GO:0031390,Ctf18 RFC-like complex,component,2,1806
PF09704,GO:0043571,maintenance of CRISPR repeat elements,process,4,1286
PF09724,GO:0031390,Ctf18 RFC-like complex,component,2,1806
PF09726,GO:0023041,neuronal signal transduction,process,1,1807
PF09728,GO:0019905,syntaxin binding,function,2,1372
PF09730,GO:0008093,cytoskeletal anchor activity,function,1,1808
PF09732,GO:0005515,protein binding,function,122,10
PF09738,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF09743,GO:0061666,UFM1 ligase activity,function,1,1809
PF09745,GO:0000381,"regulation of alternative mRNA splicing, via spliceosome",process,2,1810
PF09748,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF09749,GO:0034477,U6 snRNA 3'-end processing,process,1,1811
PF09763,GO:0006887,exocytosis,process,4,1812
PF09768,GO:0004222,metalloendopeptidase activity,function,25,511
PF09769,GO:0042407,cristae formation,process,2,1813
PF09771,GO:0035307,positive regulation of protein dephosphorylation,process,1,1814
PF09773,GO:0036038,MKS complex,component,1,1815
PF09774,GO:0005758,mitochondrial intermembrane space,component,2,1816
PF09776,GO:0005762,mitochondrial large ribosomal subunit,component,3,1817
PF09782,GO:0006120,"mitochondrial electron transport, NADH to ubiquinone",process,3,1443
PF09787,GO:0007030,Golgi organization,process,1,1818
PF09788,GO:0034597,"phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity",function,1,1819
PF09795,GO:0000407,phagophore assembly site,component,1,1820
PF09796,GO:0006122,"mitochondrial electron transport, ubiquinol to cytochrome c",process,5,735
PF09798,GO:0000077,DNA damage checkpoint signaling,process,5,698
PF09802,GO:0031204,"post-translational protein targeting to membrane, translocation",process,1,1821
PF09803,GO:0033617,mitochondrial cytochrome c oxidase assembly,process,4,1822
PF09807,GO:0033588,elongator holoenzyme complex,component,4,1232
PF09809,GO:0005762,mitochondrial large ribosomal subunit,component,3,1817
PF09810,GO:0045145,single-stranded DNA 5'-3' DNA exonuclease activity,function,1,1823
PF09815,GO:0016020,membrane,component,541,64
PF09817,GO:1990423,RZZ complex,component,1,1824
PF09830,GO:0003877,ATP adenylyltransferase activity,function,1,1825
PF09861,GO:0050043,lactate racemase activity,function,1,1826
PF09905,GO:0003677,DNA binding,function,320,19
PF09907,GO:0110001,toxin-antitoxin complex,component,3,644
PF09949,GO:0008195,phosphatidate phosphatase activity,function,1,1827
PF09995,GO:0016491,oxidoreductase activity,function,68,22
PF10014,GO:0051213,dioxygenase activity,function,1,1828
PF10018,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF10032,GO:0045047,protein targeting to ER,process,1,1829
PF10033,GO:1990316,Atg1/ULK1 kinase complex,component,1,1830
PF10034,GO:0016020,membrane,component,541,64
PF10044,GO:0070176,DRM complex,component,1,1831
PF10073,GO:0003677,DNA binding,function,320,19
PF10093,GO:0106361,protein-arginine rhamnosyltransferase activity,function,1,1832
PF10099,GO:0005886,plasma membrane,component,39,823
PF10104,GO:0031965,nuclear membrane,component,1,1833
PF10120,GO:0004789,thiamine-phosphate diphosphorylase activity,function,1,1834
PF10137,GO:0061810,NAD glycohydrolase activity,function,2,1835
PF10143,GO:0046537,"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity",function,1,1836
PF10147,GO:0005634,nucleus,component,149,411
PF10150,GO:0003723,RNA binding,function,118,6
PF10152,GO:0071203,WASH complex,component,2,1837
PF10153,GO:0006364,rRNA processing,process,23,458
PF10155,GO:0030014,CCR4-NOT complex,component,2,1115
PF10156,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF10158,GO:0032418,lysosome localization,process,1,1838
PF10161,GO:0036444,calcium import into the mitochondrion,process,1,1839
PF10163,GO:0000124,SAGA complex,component,1,1840
PF10166,GO:0010756,positive regulation of plasminogen activation,process,1,1841
PF10171,GO:0042721,TIM22 mitochondrial import inner membrane insertion complex,component,1,1842
PF10176,GO:0007034,vacuolar transport,process,2,982
PF10178,GO:0043248,proteasome assembly,process,7,1843
PF10185,GO:0006457,protein folding,process,14,489
PF10191,GO:0017119,Golgi transport complex,component,2,1134
PF10192,GO:0019236,response to pheromone,process,1,1844
PF10204,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF10218,GO:2000640,positive regulation of SREBP signaling pathway,process,1,1845
PF10220,GO:0000184,"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",process,3,1790
PF10228,GO:0010835,regulation of protein ADP-ribosylation,process,1,1846
PF10229,GO:0009235,cobalamin metabolic process,process,1,1847
PF10230,GO:0005811,lipid droplet,component,1,1848
PF10231,GO:0097193,intrinsic apoptotic signaling pathway,process,2,1849
PF10232,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF10233,GO:0016020,membrane,component,541,64
PF10237,GO:0008168,methyltransferase activity,function,37,63
PF10240,GO:0000813,ESCRT I complex,component,3,1850
PF10244,GO:0003735,structural constituent of ribosome,function,97,312
PF10255,GO:0005852,eukaryotic translation initiation factor 3 complex,component,4,1284
PF10261,GO:0106399,acyl-coenzyme A diphosphatase activity,function,1,1851
PF10265,GO:0008053,mitochondrial fusion,process,2,1240
PF10266,GO:0071203,WASH complex,component,2,1837
PF10272,GO:0061630,ubiquitin protein ligase activity,function,7,1733
PF10278,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF10280,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF10288,GO:0034227,tRNA thio-modification,process,2,1754
PF10297,GO:0005634,nucleus,component,149,411
PF10309,GO:0000340,RNA 7-methylguanosine cap binding,function,1,1852
PF10324,GO:0008528,G protein-coupled peptide receptor activity,function,1,1853
PF10341,GO:0007004,telomere maintenance via telomerase,process,1,1854
PF10345,GO:0007064,mitotic sister chromatid cohesion,process,3,1855
PF10354,GO:0070042,rRNA (uridine-N3-)-methyltransferase activity,function,1,1856
PF10371,GO:0016903,"oxidoreductase activity, acting on the aldehyde or oxo group of donors",function,2,551
PF10380,GO:0060962,regulation of ribosomal protein gene transcription by RNA polymerase II,process,1,1857
PF10384,GO:0042393,histone binding,function,5,1858
PF10385,GO:0003899,DNA-directed 5'-3' RNA polymerase activity,function,31,228
PF10390,GO:0008023,transcription elongation factor complex,component,2,1859
PF10391,GO:0034061,DNA polymerase activity,function,1,1860
PF10394,GO:0006325,chromatin organization,process,2,1228
PF10399,GO:0008121,ubiquinol-cytochrome-c reductase activity,function,3,887
PF10401,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF10403,GO:0003677,DNA binding,function,320,19
PF10404,GO:0003677,DNA binding,function,320,19
PF10405,GO:0003677,DNA binding,function,320,19
PF10408,GO:0034450,ubiquitin-ubiquitin ligase activity,function,1,1861
PF10410,GO:0016779,nucleotidyltransferase activity,function,8,600
PF10414,GO:0006779,porphyrin-containing compound biosynthetic process,process,3,1862
PF10415,GO:0006099,tricarboxylic acid cycle,process,9,1863
PF10417,GO:0051920,peroxiredoxin activity,function,2,829
PF10425,GO:0005618,cell wall,component,7,502
PF10430,GO:0007169,transmembrane receptor protein tyrosine kinase signaling pathway,process,1,1864
PF10432,GO:0004476,mannose-6-phosphate isomerase activity,function,2,1865
PF10439,GO:0042742,defense response to bacterium,process,23,591
PF10447,GO:0000178,exosome (RNase complex),component,1,1866
PF10450,GO:0043248,proteasome assembly,process,7,1843
PF10452,GO:0031931,TORC1 complex,component,1,1867
PF10458,GO:0004832,valine-tRNA ligase activity,function,1,1868
PF10459,GO:0070009,serine-type aminopeptidase activity,function,1,1869
PF10461,GO:0006974,DNA damage response,process,7,1870
PF10466,GO:0010951,negative regulation of endopeptidase activity,process,3,1548
PF10467,GO:0004869,cysteine-type endopeptidase inhibitor activity,function,3,13
PF10468,GO:0010951,negative regulation of endopeptidase activity,process,3,1548
PF10471,GO:0031145,anaphase-promoting complex-dependent catabolic process,process,3,1374
PF10473,GO:0042803,protein homodimerization activity,function,3,1696
PF10476,GO:0005637,nuclear inner membrane,component,1,1871
PF10483,GO:0033588,elongator holoenzyme complex,component,4,1232
PF10484,GO:0005840,ribosome,component,86,74
PF10486,GO:0005944,"phosphatidylinositol 3-kinase complex, class IB",component,1,1872
PF10487,GO:0017056,structural constituent of nuclear pore,function,4,1124
PF10501,GO:0005739,mitochondrion,component,27,1358
PF10502,GO:0006465,signal peptide processing,process,4,1873
PF10503,GO:0016787,hydrolase activity,function,35,65
PF10505,GO:0008023,transcription elongation factor complex,component,2,1859
PF10508,GO:0043248,proteasome assembly,process,7,1843
PF10510,GO:0016255,attachment of GPI anchor to protein,process,2,1130
PF10514,GO:0006915,apoptotic process,process,10,658
PF10521,GO:0110078,TTT Hsp90 cochaperone complex,component,1,1874
PF10523,GO:0003677,DNA binding,function,320,19
PF10530,GO:0090729,toxin activity,function,13,410
PF10538,GO:0007165,signal transduction,process,34,8
PF10541,GO:0016020,membrane,component,541,64
PF10550,GO:0035792,host cell postsynaptic membrane,component,1,1875
PF10568,GO:0001401,SAM complex,component,1,1876
PF10574,GO:0051126,negative regulation of actin nucleation,process,1,1877
PF10576,GO:0051539,"4 iron, 4 sulfur cluster binding",function,7,1878
PF10579,GO:0033130,acetylcholine receptor binding,function,1,1879
PF10584,GO:0019773,"proteasome core complex, alpha-subunit complex",component,1,1880
PF10588,GO:0016491,oxidoreductase activity,function,68,22
PF10589,GO:0051539,"4 iron, 4 sulfur cluster binding",function,7,1878
PF10591,GO:0005509,calcium ion binding,function,34,15
PF10596,GO:0017070,U6 snRNA binding,function,1,1881
PF10597,GO:0030623,U5 snRNA binding,function,1,1882
PF10598,GO:0003723,RNA binding,function,118,6
PF10605,GO:0019605,butyrate metabolic process,process,1,1883
PF10613,GO:0015276,ligand-gated monoatomic ion channel activity,function,2,23
PF10637,GO:0031418,L-ascorbic acid binding,function,1,1884
PF10640,GO:0004651,polynucleotide 5'-phosphatase activity,function,2,892
PF10645,GO:0030246,carbohydrate binding,function,20,59
PF10660,GO:0043231,intracellular membrane-bounded organelle,component,2,1786
PF10662,GO:0006576,biogenic amine metabolic process,process,1,1885
PF10664,GO:0016655,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",function,6,1386
PF10672,GO:0008168,methyltransferase activity,function,37,63
PF10681,GO:0006458,'de novo' protein folding,process,1,1886
PF10716,GO:0016655,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",function,6,1386
PF10717,GO:0019031,viral envelope,component,33,212
PF10723,GO:0006276,plasmid maintenance,process,4,763
PF10729,GO:0051301,cell division,process,9,395
PF10744,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF10746,GO:0044659,viral release from host cell by cytolysis,process,4,957
PF10755,GO:0005886,plasma membrane,component,39,823
PF10759,GO:0061136,regulation of proteasomal protein catabolic process,process,1,1887
PF10766,GO:1990961,xenobiotic detoxification by transmembrane export across the plasma membrane,process,1,1888
PF10768,GO:0044781,bacterial-type flagellum organization,process,3,1174
PF10775,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF10778,GO:0019120,"hydrolase activity, acting on acid halide bonds, in C-halide compounds",function,1,1889
PF10791,GO:0000276,"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)",component,8,334
PF10796,GO:0005737,cytoplasm,component,103,370
PF10798,GO:0071468,cellular response to acidic pH,process,1,1890
PF10808,GO:0016020,membrane,component,541,64
PF10824,GO:0009306,protein secretion,process,11,123
PF10843,GO:0006112,energy reserve metabolic process,process,1,1891
PF10863,GO:0030686,90S preribosome,component,2,1892
PF10868,GO:0050832,defense response to fungus,process,5,359
PF10890,GO:0070469,respirasome,component,1,1893
PF10937,GO:0009353,mitochondrial oxoglutarate dehydrogenase complex,component,1,1894
PF10954,GO:0016020,membrane,component,541,64
PF10955,GO:0010468,regulation of gene expression,process,3,787
PF10995,GO:0035438,cyclic-di-GMP binding,function,2,1546
PF11031,GO:0044659,viral release from host cell by cytolysis,process,4,957
PF11035,GO:0016251,RNA polymerase II general transcription initiation factor activity,function,1,1895
PF11045,GO:0016020,membrane,component,541,64
PF11047,GO:0033644,host cell membrane,component,6,235
PF11051,GO:0006486,protein glycosylation,process,9,1203
PF11069,GO:0003352,regulation of cilium movement,process,1,1896
PF11080,GO:0004521,RNA endonuclease activity,function,6,223
PF11081,GO:0019073,viral DNA genome packaging,process,5,497
PF11087,GO:0039641,viral inner membrane,component,1,1897
PF11093,GO:0042720,mitochondrial inner membrane peptidase complex,component,1,1898
PF11095,GO:0034719,SMN-Sm protein complex,component,1,1899
PF11099,GO:0019050,suppression by virus of host apoptotic process,process,2,585
PF11107,GO:0036297,interstrand cross-link repair,process,4,687
PF11108,GO:0019064,fusion of virus membrane with host plasma membrane,process,9,215
PF11109,GO:0031854,orexigenic neuropeptide QRFP receptor binding,function,1,1900
PF11112,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF11182,GO:0042121,alginic acid biosynthetic process,process,1,1901
PF11264,GO:0010207,photosystem II assembly,process,3,1902
PF11266,GO:0071771,aldehyde decarbonylase activity,function,1,1903
PF11277,GO:0016592,mediator complex,component,26,1904
PF11289,GO:0039707,virus-mediated pore formation in host cell membrane,process,2,1905
PF11347,GO:0010258,NADH dehydrogenase complex (plastoquinone) assembly,process,1,1906
PF11357,GO:0045737,positive regulation of cyclin-dependent protein serine/threonine kinase activity,process,1,1907
PF11365,GO:0010506,regulation of autophagy,process,1,1908
PF11380,GO:0016772,"transferase activity, transferring phosphorus-containing groups",function,7,100
PF11382,GO:0055070,copper ion homeostasis,process,1,1909
PF11389,GO:0015288,porin activity,function,8,475
PF11395,GO:0016020,membrane,component,541,64
PF11402,GO:0050832,defense response to fungus,process,5,359
PF11403,GO:0071585,detoxification of cadmium ion,process,1,1910
PF11408,GO:0043138,3'-5' DNA helicase activity,function,2,1787
PF11411,GO:0003910,DNA ligase (ATP) activity,function,4,383
PF11421,GO:0006754,ATP biosynthetic process,process,1,1911
PF11427,GO:0003677,DNA binding,function,320,19
PF11429,GO:0004540,RNA nuclease activity,function,7,293
PF11431,GO:0016020,membrane,component,541,64
PF11435,GO:0003723,RNA binding,function,118,6
PF11461,GO:0046983,protein dimerization activity,function,22,4
PF11468,GO:0016740,transferase activity,function,18,291
PF11480,GO:0030153,bacteriocin immunity,process,8,1496
PF11496,GO:0070823,HDA1 complex,component,1,1912
PF11504,GO:0050829,defense response to Gram-negative bacterium,process,3,1913
PF11507,GO:0008270,zinc ion binding,function,101,229
PF11520,GO:0003690,double-stranded DNA binding,function,5,127
PF11522,GO:0016773,"phosphotransferase activity, alcohol group as acceptor",function,8,160
PF11525,GO:0046872,metal ion binding,function,48,38
PF11526,GO:0006369,termination of RNA polymerase II transcription,process,1,1914
PF11538,GO:0005515,protein binding,function,122,10
PF11540,GO:0005868,cytoplasmic dynein complex,component,1,1915
PF11545,GO:0020037,heme binding,function,26,17
PF11547,GO:0043130,ubiquitin binding,function,8,873
PF11561,GO:0070336,flap-structured DNA binding,function,1,1916
PF11563,GO:0019825,oxygen binding,function,2,422
PF11568,GO:0016592,mediator complex,component,26,1904
PF11571,GO:0016592,mediator complex,component,26,1904
PF11575,GO:0051537,"2 iron, 2 sulfur cluster binding",function,5,163
PF11585,GO:0050832,defense response to fungus,process,5,359
PF11590,GO:0004523,RNA-DNA hybrid ribonuclease activity,function,5,31
PF11593,GO:0006357,regulation of transcription by RNA polymerase II,process,22,427
PF11602,GO:0019072,viral genome packaging,process,2,531
PF11605,GO:0032266,phosphatidylinositol-3-phosphate binding,function,1,1917
PF11606,GO:0033905,"xylan endo-1,3-beta-xylosidase activity",function,1,1918
PF11610,GO:0019900,kinase binding,function,1,1919
PF11612,GO:0015628,protein secretion by the type II secretion system,process,5,434
PF11615,GO:0000266,mitochondrial fission,process,1,1920
PF11616,GO:0046976,histone H3K27 methyltransferase activity,function,1,1921
PF11623,GO:0009767,photosynthetic electron transport chain,process,2,1922
PF11629,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF11633,GO:0002151,G-quadruplex RNA binding,function,1,1923
PF11635,GO:0016592,mediator complex,component,26,1904
PF11640,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF11654,GO:0009306,protein secretion,process,11,123
PF11657,GO:0009372,quorum sensing,process,5,1214
PF11663,GO:0110001,toxin-antitoxin complex,component,3,644
PF11698,GO:0000221,"vacuolar proton-transporting V-type ATPase, V1 domain",component,2,952
PF11704,GO:0005096,GTPase activator activity,function,9,516
PF11705,GO:0006383,transcription by RNA polymerase III,process,3,1924
PF11712,GO:0070072,vacuolar proton-transporting V-type ATPase complex assembly,process,4,1706
PF11716,GO:0046872,metal ion binding,function,48,38
PF11719,GO:0006260,DNA replication,process,57,300
PF11722,GO:0008168,methyltransferase activity,function,37,63
PF11734,GO:0016879,"ligase activity, forming carbon-nitrogen bonds",function,4,1512
PF11744,GO:0015743,malate transport,process,1,1925
PF11770,GO:0016020,membrane,component,541,64
PF11774,GO:0003677,DNA binding,function,320,19
PF11789,GO:0008270,zinc ion binding,function,101,229
PF11791,GO:0003994,aconitate hydratase activity,function,2,1463
PF11799,GO:0003684,damaged DNA binding,function,5,1926
PF11802,GO:0051382,kinetochore assembly,process,4,1373
PF11803,GO:0048040,UDP-glucuronate decarboxylase activity,function,1,1927
PF11806,GO:0008849,enterochelin esterase activity,function,1,1928
PF11807,GO:0043386,mycotoxin biosynthetic process,process,2,1568
PF11808,GO:0004721,phosphoprotein phosphatase activity,function,5,1225
PF11815,GO:0004806,triglyceride lipase activity,function,2,1017
PF11837,GO:0004564,beta-fructofuranosidase activity,function,1,1929
PF11847,GO:0016740,transferase activity,function,18,291
PF11851,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF11857,GO:0004222,metalloendopeptidase activity,function,25,511
PF11883,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF11889,GO:0070008,serine-type exopeptidase activity,function,6,1349
PF11890,GO:0046983,protein dimerization activity,function,22,4
PF11894,GO:0005643,nuclear pore,component,7,1726
PF11896,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF11909,GO:0016655,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",function,6,1386
PF11910,GO:0016655,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",function,6,1386
PF11931,GO:0005681,spliceosomal complex,component,4,856
PF11955,GO:0003723,RNA binding,function,118,6
PF11956,GO:0005267,potassium channel activity,function,3,1930
PF11960,GO:0016717,"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water",function,1,1931
PF11961,GO:0045927,positive regulation of growth,process,2,1270
PF11965,GO:0016851,magnesium chelatase activity,function,1,1932
PF11973,GO:0016655,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",function,6,1386
PF11975,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF11991,GO:0009820,alkaloid metabolic process,process,1,1933
PF12009,GO:0003964,RNA-directed DNA polymerase activity,function,3,1934
PF12011,GO:0017111,ribonucleoside triphosphate phosphatase activity,function,10,367
PF12019,GO:0015628,protein secretion by the type II secretion system,process,5,434
PF12025,GO:0019073,viral DNA genome packaging,process,5,497
PF12036,GO:0016020,membrane,component,541,64
PF12062,GO:0015016,[heparan sulfate]-glucosamine N-sulfotransferase activity,function,1,1935
PF12063,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF12070,GO:0003714,transcription corepressor activity,function,3,1510
PF12105,GO:0141100,tRNA (guanine(18)-2'-O)-methyltransferase activity,function,1,1936
PF12106,GO:0004540,RNA nuclease activity,function,7,293
PF12109,GO:0019955,cytokine binding,function,1,1937
PF12122,GO:0004252,serine-type endopeptidase activity,function,29,35
PF12125,GO:0046983,protein dimerization activity,function,22,4
PF12131,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF12133,GO:0044165,host cell endoplasmic reticulum,component,1,1938
PF12137,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF12141,GO:0000030,mannosyltransferase activity,function,4,612
PF12142,GO:0004097,catechol oxidase activity,function,2,1939
PF12143,GO:0004097,catechol oxidase activity,function,2,1939
PF12144,GO:0008013,beta-catenin binding,function,5,1387
PF12153,GO:0042742,defense response to bacterium,process,23,591
PF12162,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF12165,GO:0042393,histone binding,function,5,1858
PF12169,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF12170,GO:0003887,DNA-directed DNA polymerase activity,function,20,113
PF12179,GO:0008384,IkappaB kinase activity,function,1,1940
PF12189,GO:0006457,protein folding,process,14,489
PF12190,GO:0010466,negative regulation of peptidase activity,process,1,1941
PF12191,GO:0043065,positive regulation of apoptotic process,process,4,1449
PF12199,GO:0001848,complement binding,function,1,1942
PF12201,GO:0006915,apoptotic process,process,10,658
PF12202,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF12217,GO:0016996,"endo-alpha-(2,8)-sialidase activity",function,1,1943
PF12235,GO:0003723,RNA binding,function,118,6
PF12242,GO:0016491,oxidoreductase activity,function,68,22
PF12249,GO:0044038,cell wall macromolecule biosynthetic process,process,3,1944
PF12250,GO:0044038,cell wall macromolecule biosynthetic process,process,3,1944
PF12258,GO:0021987,cerebral cortex development,process,1,1945
PF12270,GO:0022900,electron transport chain,process,6,863
PF12285,GO:0070008,serine-type exopeptidase activity,function,6,1349
PF12288,GO:0043886,structural constituent of carboxysome shell,function,1,1946
PF12289,GO:0003968,RNA-dependent RNA polymerase activity,function,34,259
PF12297,GO:0007224,smoothened signaling pathway,process,2,1947
PF12300,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF12317,GO:0042073,intraciliary transport,process,1,1948
PF12326,GO:0034599,cellular response to oxidative stress,process,1,1949
PF12328,GO:0005655,nucleolar ribonuclease P complex,component,1,1950
PF12336,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF12343,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF12351,GO:0016020,membrane,component,541,64
PF12356,GO:0032465,regulation of cytokinesis,process,1,1951
PF12361,GO:0016020,membrane,component,541,64
PF12387,GO:0070008,serine-type exopeptidase activity,function,6,1349
PF12398,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF12422,GO:0005634,nucleus,component,149,411
PF12424,GO:0005388,P-type calcium transporter activity,function,1,1952
PF12437,GO:0004356,glutamine synthetase activity,function,4,50
PF12463,GO:0031464,Cul4A-RING E3 ubiquitin ligase complex,component,1,1953
PF12464,GO:0016407,acetyltransferase activity,function,3,299
PF12467,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF12470,GO:0005515,protein binding,function,122,10
PF12474,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF12483,GO:0006996,organelle organization,process,1,1954
PF12501,GO:0006817,phosphate ion transport,process,2,1955
PF12503,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF12513,GO:0016817,"hydrolase activity, acting on acid anhydrides",function,13,216
PF12515,GO:0005516,calmodulin binding,function,10,671
PF12519,GO:0032865,ERMES complex,component,1,1956
PF12537,GO:0016020,membrane,component,541,64
PF12539,GO:0005515,protein binding,function,122,10
PF12549,GO:0004511,tyrosine 3-monooxygenase activity,function,1,1957
PF12554,GO:0033566,gamma-tubulin complex localization,process,1,1958
PF12567,GO:0050852,T cell receptor signaling pathway,process,2,1959
PF12581,GO:0070008,serine-type exopeptidase activity,function,6,1349
PF12589,GO:0016435,rRNA (guanine) methyltransferase activity,function,1,1960
PF12590,GO:0016790,thiolester hydrolase activity,function,2,571
PF12597,GO:0033617,mitochondrial cytochrome c oxidase assembly,process,4,1822
PF12601,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF12605,GO:0004674,protein serine/threonine kinase activity,function,18,1636
PF12619,GO:0042555,MCM complex,component,1,1961
PF12632,GO:0017022,myosin binding,function,1,1962
PF12634,GO:0005780,extrinsic component of intraperoxisomal membrane,component,1,1963
PF12641,GO:0010181,FMN binding,function,8,120
PF12643,GO:0009143,nucleoside triphosphate catabolic process,process,2,593
PF12658,GO:0016233,telomere capping,process,2,1964
PF12659,GO:0016233,telomere capping,process,2,1964
PF12678,GO:0008270,zinc ion binding,function,101,229
PF12679,GO:0140359,ABC-type transporter activity,function,7,257
PF12682,GO:0010181,FMN binding,function,8,120
PF12689,GO:0016791,phosphatase activity,function,8,115
PF12695,GO:0016787,hydrolase activity,function,35,65
PF12698,GO:0140359,ABC-type transporter activity,function,7,257
PF12735,GO:1990071,TRAPPII protein complex,component,1,1965
PF12753,GO:0005515,protein binding,function,122,10
PF12761,GO:0006897,endocytosis,process,3,1616
PF12763,GO:0005515,protein binding,function,122,10
PF12766,GO:0010181,FMN binding,function,8,120
PF12767,GO:0070461,SAGA-type complex,component,1,1966
PF12774,GO:0005524,ATP binding,function,178,2
PF12796,GO:0005515,protein binding,function,122,10
PF12802,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF12814,GO:0005938,cell cortex,component,1,1967
PF12822,GO:0022857,transmembrane transporter activity,function,25,34
PF12829,GO:0000002,mitochondrial genome maintenance,process,4,1968
PF12833,GO:0043565,sequence-specific DNA binding,function,17,41
PF12856,GO:0005680,anaphase-promoting complex,component,8,1110
PF12861,GO:0097602,cullin family protein binding,function,1,1969
PF12884,GO:0051289,protein homotetramerization,process,1,1970
PF12897,GO:0004069,L-aspartate:2-oxoglutarate aminotransferase activity,function,1,1971
PF12899,GO:0033926,glycopeptide alpha-N-acetylgalactosaminidase activity,function,2,1972
PF12905,GO:0033926,glycopeptide alpha-N-acetylgalactosaminidase activity,function,2,1972
PF12906,GO:0008270,zinc ion binding,function,101,229
PF12919,GO:0016757,glycosyltransferase activity,function,16,218
PF12924,GO:0046914,transition metal ion binding,function,4,859
PF12929,GO:0098703,calcium ion import across plasma membrane,process,1,1973
PF12937,GO:0005515,protein binding,function,122,10
PF12940,GO:0033151,V(D)J recombination,process,1,1974
PF13000,GO:0008521,acetyl-CoA transmembrane transporter activity,function,1,1975
PF13001,GO:0060090,molecular adaptor activity,function,1,1976
PF13008,GO:0046872,metal ion binding,function,48,38
PF13013,GO:0005515,protein binding,function,122,10
PF13017,GO:0060964,regulation of miRNA-mediated gene silencing,process,1,1977
PF13085,GO:0051536,iron-sulfur cluster binding,function,15,44
PF13086,GO:0004386,helicase activity,function,6,849
PF13093,GO:0031511,Mis6-Sim4 complex,component,1,1978
PF13096,GO:0034080,CENP-A containing chromatin assembly,process,3,1306
PF13145,GO:0003755,peptidyl-prolyl cis-trans isomerase activity,function,4,117
PF13174,GO:0005515,protein binding,function,122,10
PF13176,GO:0005515,protein binding,function,122,10
PF13180,GO:0005515,protein binding,function,122,10
PF13181,GO:0005515,protein binding,function,122,10
PF13184,GO:0003723,RNA binding,function,118,6
PF13185,GO:0005515,protein binding,function,122,10
PF13202,GO:0005509,calcium ion binding,function,34,15
PF13225,GO:0005506,iron ion binding,function,22,142
PF13292,GO:0008661,1-deoxy-D-xylulose-5-phosphate synthase activity,function,1,1979
PF13302,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF13303,GO:0008982,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,function,8,167
PF13304,GO:0016887,ATP hydrolysis activity,function,15,1
PF13307,GO:0006139,nucleobase-containing compound metabolic process,process,3,564
PF13326,GO:0010206,photosystem II repair,process,1,1980
PF13333,GO:0015074,DNA integration,process,12,234
PF13350,GO:0004721,phosphoprotein phosphatase activity,function,5,1225
PF13354,GO:0008800,beta-lactamase activity,function,1,1981
PF13361,GO:0016787,hydrolase activity,function,35,65
PF13367,GO:0008233,peptidase activity,function,18,349
PF13397,GO:0001000,bacterial-type RNA polymerase core enzyme binding,function,1,1982
PF13401,GO:0016887,ATP hydrolysis activity,function,15,1
PF13404,GO:0043565,sequence-specific DNA binding,function,17,41
PF13405,GO:0005509,calcium ion binding,function,34,15
PF13411,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF13442,GO:0009055,electron transfer activity,function,20,14
PF13456,GO:0004523,RNA-DNA hybrid ribonuclease activity,function,5,31
PF13463,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF13476,GO:0006302,double-strand break repair,process,5,1144
PF13492,GO:0005515,protein binding,function,122,10
PF13495,GO:0015074,DNA integration,process,12,234
PF13499,GO:0005509,calcium ion binding,function,34,15
PF13506,GO:0016757,glycosyltransferase activity,function,16,218
PF13508,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF13516,GO:0005515,protein binding,function,122,10
PF13520,GO:0022857,transmembrane transporter activity,function,25,34
PF13539,GO:0008233,peptidase activity,function,18,349
PF13545,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF13580,GO:0097367,carbohydrate derivative binding,function,2,504
PF13597,GO:0008998,ribonucleoside-triphosphate reductase activity,function,1,1983
PF13603,GO:0002161,aminoacyl-tRNA editing activity,function,3,1113
PF13606,GO:0005515,protein binding,function,122,10
PF13609,GO:0015288,porin activity,function,8,475
PF13631,GO:0009055,electron transfer activity,function,20,14
PF13637,GO:0005515,protein binding,function,122,10
PF13656,GO:0046983,protein dimerization activity,function,22,4
PF13673,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF13676,GO:0007165,signal transduction,process,34,8
PF13683,GO:0015074,DNA integration,process,12,234
PF13691,GO:0008033,tRNA processing,process,8,632
PF13694,GO:0005783,endoplasmic reticulum,component,13,1325
PF13718,GO:0016747,"acyltransferase activity, transferring groups other than amino-acyl groups",function,13,42
PF13724,GO:0003677,DNA binding,function,320,19
PF13741,GO:0005763,mitochondrial small ribosomal subunit,component,3,1984
PF13742,GO:0003676,nucleic acid binding,function,32,39
PF13748,GO:0140359,ABC-type transporter activity,function,7,257
PF13762,GO:1990904,ribonucleoprotein complex,component,1,1985
PF13806,GO:0008942,nitrite reductase [NAD(P)H] activity,function,1,1986
PF13822,GO:0004658,propionyl-CoA carboxylase activity,function,1,1987
PF13833,GO:0005509,calcium ion binding,function,34,15
PF13839,GO:0016740,transferase activity,function,18,291
PF13841,GO:0045087,innate immune response,process,3,1640
PF13851,GO:0048870,cell motility,process,1,1988
PF13853,GO:0004984,olfactory receptor activity,function,2,1989
PF13855,GO:0005515,protein binding,function,122,10
PF13857,GO:0005515,protein binding,function,122,10
PF13867,GO:0005515,protein binding,function,122,10
PF13869,GO:0006378,mRNA polyadenylation,process,2,1990
PF13885,GO:0045095,keratin filament,component,3,532
PF13887,GO:0016540,protein autoprocessing,process,2,387
PF13892,GO:0003677,DNA binding,function,320,19
PF13903,GO:0016020,membrane,component,541,64
PF13914,GO:0019902,phosphatase binding,function,2,1991
PF13922,GO:0003677,DNA binding,function,320,19
PF13925,GO:0008017,microtubule binding,function,17,712
PF13929,GO:0048255,mRNA stabilization,process,2,1992
PF13931,GO:0008017,microtubule binding,function,17,712
PF13939,GO:0022611,dormancy process,process,1,1993
PF13947,GO:0030247,polysaccharide binding,function,3,1994
PF13949,GO:0005515,protein binding,function,122,10
PF13954,GO:0005515,protein binding,function,122,10
PF13958,GO:0004521,RNA endonuclease activity,function,6,223
PF13965,GO:0016020,membrane,component,541,64
PF13971,GO:0042138,meiotic DNA double-strand break formation,process,4,1995
PF13979,GO:0004842,ubiquitin-protein transferase activity,function,8,247
PF13994,GO:0043709,cell adhesion involved in single-species biofilm formation,process,1,1996
PF14010,GO:0008964,phosphoenolpyruvate carboxylase activity,function,2,147
PF14021,GO:0061810,NAD glycohydrolase activity,function,2,1835
PF14027,GO:0016491,oxidoreductase activity,function,68,22
PF14073,GO:0043015,gamma-tubulin binding,function,2,1135
PF14089,GO:0045881,positive regulation of sporulation resulting in formation of a cellular spore,process,1,1997
PF14098,GO:0030436,asexual sporulation,process,6,994
PF14102,GO:0045227,capsule polysaccharide biosynthetic process,process,2,1998
PF14130,GO:0004518,nuclease activity,function,9,288
PF14138,GO:0031966,mitochondrial membrane,component,1,1999
PF14144,GO:0043565,sequence-specific DNA binding,function,17,41
PF14171,GO:0016020,membrane,component,541,64
PF14249,GO:0009976,tocopherol cyclase activity,function,1,2000
PF14290,GO:0045273,respiratory chain complex II,component,1,2001
PF14304,GO:0031124,mRNA 3'-end processing,process,2,1507
PF14369,GO:0061630,ubiquitin protein ligase activity,function,7,1733
PF14372,GO:0003677,DNA binding,function,320,19
PF14432,GO:0008270,zinc ion binding,function,101,229
PF14436,GO:0004519,endonuclease activity,function,25,356
PF14437,GO:0008251,tRNA-specific adenosine deaminase activity,function,1,2002
PF14489,GO:0033739,preQ1 synthase activity,function,1,2003
PF14496,GO:0004842,ubiquitin-protein transferase activity,function,8,247
PF14521,GO:0004222,metalloendopeptidase activity,function,25,511
PF14523,GO:0016020,membrane,component,541,64
PF14528,GO:0004519,endonuclease activity,function,25,356
PF14529,GO:0003824,catalytic activity,function,50,132
PF14532,GO:0008134,transcription factor binding,function,5,69
PF14554,GO:0008201,heparin binding,function,3,709
PF14560,GO:0005515,protein binding,function,122,10
PF14565,GO:0005576,extracellular region,component,203,16
PF14572,GO:0004749,ribose phosphate diphosphokinase activity,function,1,2004
PF14583,GO:0047487,oligogalacturonide lyase activity,function,1,2005
PF14587,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF14604,GO:0005515,protein binding,function,122,10
PF14611,GO:0005743,mitochondrial inner membrane,component,15,1701
PF14612,GO:0031011,Ino80 complex,component,4,1239
PF14619,GO:0042393,histone binding,function,5,1858
PF14620,GO:0009847,spore germination,process,4,973
PF14622,GO:0004525,ribonuclease III activity,function,2,248
PF14631,GO:0006281,DNA repair,process,37,307
PF14641,GO:0003677,DNA binding,function,320,19
PF14659,GO:0015074,DNA integration,process,12,234
PF14672,GO:0008544,epidermis development,process,1,2006
PF14718,GO:0042597,periplasmic space,component,13,1111
PF14721,GO:0046983,protein dimerization activity,function,22,4
PF14722,GO:0005102,signaling receptor binding,function,8,114
PF14724,GO:0050290,sphingomyelin phosphodiesterase D activity,function,1,2007
PF14735,GO:0070652,HAUS complex,component,2,2008
PF14736,GO:0008418,protein-N-terminal asparagine amidohydrolase activity,function,1,2009
PF14750,GO:0032039,integrator complex,component,2,2010
PF14752,GO:0034632,retinol transmembrane transporter activity,function,1,2011
PF14764,GO:0044599,AP-5 adaptor complex,component,1,2012
PF14777,GO:0034464,BBSome,component,2,1553
PF14813,GO:0005747,mitochondrial respiratory chain complex I,component,5,2013
PF14817,GO:0070652,HAUS complex,component,2,2008
PF14820,GO:0001533,cornified envelope,component,3,2014
PF14822,GO:0045765,regulation of angiogenesis,process,1,2015
PF14829,GO:0004366,glycerol-3-phosphate O-acyltransferase activity,function,1,2016
PF14833,GO:0051287,NAD binding,function,13,18
PF14850,GO:0003842,1-pyrroline-5-carboxylate dehydrogenase activity,function,1,2017
PF14859,GO:0042742,defense response to bacterium,process,23,591
PF14860,GO:0044161,host cell cytoplasmic vesicle,component,1,2018
PF14861,GO:0050832,defense response to fungus,process,5,359
PF14862,GO:0050829,defense response to Gram-negative bacterium,process,3,1913
PF14863,GO:0046983,protein dimerization activity,function,22,4
PF14865,GO:0006952,defense response,process,23,149
PF14867,GO:0050830,defense response to Gram-positive bacterium,process,3,2019
PF14876,GO:0045333,cellular respiration,process,1,2020
PF14892,GO:0005879,axonemal microtubule,component,1,2021
PF14895,GO:0010923,negative regulation of phosphatase activity,process,1,2022
PF14925,GO:0000226,microtubule cytoskeleton organization,process,5,1500
PF14928,GO:0046872,metal ion binding,function,48,38
PF14929,GO:0000120,RNA polymerase I transcription regulator complex,component,1,2023
PF14942,GO:0031083,BLOC-1 complex,component,1,2024
PF14943,GO:0005763,mitochondrial small ribosomal subunit,component,3,1984
PF14955,GO:0005739,mitochondrion,component,27,1358
PF14960,GO:0005753,mitochondrial proton-transporting ATP synthase complex,component,1,2025
PF14972,GO:0007005,mitochondrion organization,process,3,2026
PF14978,GO:0005761,mitochondrial ribosome,component,2,1528
PF14980,GO:0007218,neuropeptide signaling pathway,process,11,426
PF14984,GO:0007155,cell adhesion,process,28,363
PF14987,GO:0005747,mitochondrial respiratory chain complex I,component,5,2013
PF14990,GO:0034551,mitochondrial respiratory chain complex III assembly,process,3,2027
PF14991,GO:0042470,melanosome,component,2,2028
PF14993,GO:0007218,neuropeptide signaling pathway,process,11,426
PF14999,GO:0016020,membrane,component,541,64
PF15001,GO:0030119,AP-type membrane coat adaptor complex,component,1,2029
PF15003,GO:0031023,microtubule organizing center organization,process,1,2030
PF15009,GO:0002218,activation of innate immune response,process,1,2031
PF15014,GO:0005764,lysosome,component,1,2032
PF15015,GO:0005794,Golgi apparatus,component,2,2033
PF15019,GO:0005085,guanyl-nucleotide exchange factor activity,function,8,244
PF15020,GO:0036128,CatSper complex,component,2,2034
PF15021,GO:2001032,regulation of double-strand break repair via nonhomologous end joining,process,1,2035
PF15024,GO:0030144,"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity",function,1,2036
PF15036,GO:0001934,positive regulation of protein phosphorylation,process,1,2037
PF15048,GO:0015721,bile acid and bile salt transport,process,1,2038
PF15050,GO:0097197,tetraspanin-enriched microdomain,component,1,2039
PF15053,GO:0099041,vesicle tethering to Golgi,process,1,2040
PF15056,GO:0007399,nervous system development,process,1,2041
PF15060,GO:0030154,cell differentiation,process,4,1509
PF15061,GO:0033617,mitochondrial cytochrome c oxidase assembly,process,4,1822
PF15064,GO:0097228,sperm principal piece,component,1,2042
PF15068,GO:0061572,actin filament bundle organization,process,1,2043
PF15072,GO:0000725,recombinational repair,process,3,2044
PF15077,GO:0003677,DNA binding,function,320,19
PF15085,GO:0005184,neuropeptide hormone activity,function,7,1391
PF15088,GO:0005747,mitochondrial respiratory chain complex I,component,5,2013
PF15091,GO:0042138,meiotic DNA double-strand break formation,process,4,1995
PF15095,GO:0005125,cytokine activity,function,10,468
PF15108,GO:0005244,voltage-gated monoatomic ion channel activity,function,1,2045
PF15127,GO:0034237,protein kinase A regulatory subunit binding,function,1,2046
PF15129,GO:0030298,receptor signaling protein tyrosine kinase activator activity,function,1,2047
PF15133,GO:0034121,regulation of toll-like receptor signaling pathway,process,1,2048
PF15138,GO:0030667,secretory granule membrane,component,1,2049
PF15141,GO:0034551,mitochondrial respiratory chain complex III assembly,process,3,2027
PF15146,GO:0043240,Fanconi anaemia nuclear complex,component,4,2050
PF15150,GO:0001836,release of cytochrome c from mitochondria,process,1,2051
PF15151,GO:0051726,regulation of cell cycle,process,5,625
PF15162,GO:0007130,synaptonemal complex assembly,process,5,2052
PF15163,GO:0005634,nucleus,component,149,411
PF15168,GO:0005789,endoplasmic reticulum membrane,component,19,1063
PF15170,GO:0004860,protein kinase inhibitor activity,function,2,499
PF15171,GO:0005184,neuropeptide hormone activity,function,7,1391
PF15172,GO:0005179,hormone activity,function,28,21
PF15177,GO:0050778,positive regulation of immune response,process,1,2053
PF15180,GO:0001664,G protein-coupled receptor binding,function,2,2054
PF15182,GO:0007605,sensory perception of sound,process,1,2055
PF15184,GO:0005742,mitochondrial outer membrane translocase complex,component,4,2056
PF15185,GO:0006915,apoptotic process,process,10,658
PF15189,GO:0051321,meiotic cell cycle,process,2,1704
PF15191,GO:0007131,reciprocal meiotic recombination,process,5,1010
PF15199,GO:1900758,negative regulation of D-amino-acid oxidase activity,process,1,2057
PF15200,GO:0005576,extracellular region,component,203,16
PF15201,GO:0042622,photoreceptor outer segment membrane,component,1,2058
PF15202,GO:0045444,fat cell differentiation,process,1,2059
PF15203,GO:0097524,sperm plasma membrane,component,1,2060
PF15208,GO:0001881,receptor recycling,process,1,2061
PF15216,GO:0005125,cytokine activity,function,10,468
PF15220,GO:0001819,positive regulation of cytokine production,process,1,2062
PF15221,GO:0007275,multicellular organism development,process,19,194
PF15225,GO:0006955,immune response,process,22,2063
PF15233,GO:0070193,synaptonemal complex organization,process,1,2064
PF15234,GO:0007165,signal transduction,process,34,8
PF15243,GO:0090266,regulation of mitotic cell cycle spindle assembly checkpoint,process,1,2065
PF15245,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF15247,GO:0003723,RNA binding,function,118,6
PF15270,GO:0008191,metalloendopeptidase inhibitor activity,function,3,358
PF15281,GO:0071253,connexin binding,function,1,2066
PF15291,GO:0031640,killing of cells of another organism,process,3,2067
PF15293,GO:0003723,RNA binding,function,118,6
PF15299,GO:0003700,DNA-binding transcription factor activity,function,60,53
PF15305,GO:0030991,intraciliary transport particle A,component,1,2068
PF15306,GO:0017053,transcription repressor complex,component,1,2069
PF15307,GO:0001669,acrosomal vesicle,component,2,2070
PF15310,GO:0007283,spermatogenesis,process,9,2071
PF15313,GO:0017069,snRNA binding,function,1,2072
PF15319,GO:0071479,cellular response to ionizing radiation,process,1,2073
PF15320,GO:0106005,RNA 5'-cap (guanine-N7)-methylation,process,1,2074
PF15323,GO:0072669,tRNA-splicing ligase complex,component,1,2075
PF15324,GO:0007224,smoothened signaling pathway,process,2,1947
PF15325,GO:2001033,negative regulation of double-strand break repair via nonhomologous end joining,process,1,2076
PF15328,GO:0003711,transcription elongation factor activity,function,1,2077
PF15332,GO:0050853,B cell receptor signaling pathway,process,1,2078
PF15333,GO:0005668,RNA polymerase transcription factor SL1 complex,component,1,2079
PF15335,GO:0042981,regulation of apoptotic process,process,5,243
PF15337,GO:0045893,positive regulation of DNA-templated transcription,process,18,337
PF15339,GO:0060478,acrosomal vesicle exocytosis,process,1,2080
PF15340,GO:0043985,histone H4-R3 methylation,process,1,2081
PF15341,GO:0030688,"preribosome, small subunit precursor",component,2,1398
PF15347,GO:0050868,negative regulation of T cell activation,process,1,2082
PF15348,GO:0032797,SMN complex,component,1,2083
PF15351,GO:0005911,cell-cell junction,component,1,2084
PF15352,GO:1905515,non-motile cilium assembly,process,1,2085
PF15360,GO:0031704,apelin receptor binding,function,1,2086
PF15367,GO:0007283,spermatogenesis,process,9,2071
PF15370,GO:0000492,box C/D snoRNP assembly,process,1,2087
PF15384,GO:0006303,double-strand break repair via nonhomologous end joining,process,5,858
PF15387,GO:0000408,EKC/KEOPS complex,component,1,2088
PF15427,GO:0048306,calcium-dependent protein binding,function,1,2089
PF15432,GO:0015031,protein transport,process,20,156
PF15433,GO:0005763,mitochondrial small ribosomal subunit,component,3,1984
PF15454,GO:0031902,late endosome membrane,component,1,2090
PF15457,GO:0044419,biological process involved in interspecies interaction between organisms,process,2,1671
PF15458,GO:0000390,spliceosomal complex disassembly,process,1,2091
PF15460,GO:0016573,histone acetylation,process,5,2092
PF15461,GO:0016702,"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen",function,5,144
PF15462,GO:0006821,chloride transport,process,2,2093
PF15473,GO:0016567,protein ubiquitination,process,11,2094
PF15476,GO:0005737,cytoplasm,component,103,370
PF15489,GO:0003697,single-stranded DNA binding,function,14,189
PF15490,GO:1990879,CST complex,component,3,2095
PF15491,GO:0000723,telomere maintenance,process,3,1392
PF15494,GO:0016020,membrane,component,541,64
PF15497,GO:0006384,transcription initiation at RNA polymerase III promoter,process,1,2096
PF15499,GO:0032183,SUMO binding,function,1,2097
PF15501,GO:0046600,negative regulation of centriole replication,process,1,2098
PF15510,GO:0051382,kinetochore assembly,process,4,1373
PF15549,GO:0035064,methylated histone binding,function,1,2099
PF15550,GO:0007411,axon guidance,process,2,2100
PF15551,GO:0003334,keratinocyte development,process,1,2101
PF15556,GO:0007093,mitotic cell cycle checkpoint signaling,process,2,2102
PF15630,GO:0071821,FANCM-MHF complex,component,1,2103
PF15666,GO:0050855,regulation of B cell receptor signaling pathway,process,1,2104
PF15673,GO:0032922,circadian regulation of gene expression,process,1,2105
PF15677,GO:0021549,cerebellum development,process,1,2106
PF15678,GO:0090307,mitotic spindle assembly,process,1,2107
PF15679,GO:0042254,ribosome biogenesis,process,7,1183
PF15681,GO:0051249,regulation of lymphocyte activation,process,1,2108
PF15682,GO:0002062,chondrocyte differentiation,process,1,2109
PF15683,GO:0007283,spermatogenesis,process,9,2071
PF15685,GO:0007276,gamete generation,process,2,794
PF15686,GO:0045766,positive regulation of angiogenesis,process,1,2110
PF15699,GO:0010112,regulation of systemic acquired resistance,process,1,2111
PF15703,GO:0042113,B cell activation,process,1,2112
PF15704,GO:0009555,pollen development,process,1,2113
PF15710,GO:1990918,double-strand break repair involved in meiotic recombination,process,1,2114
PF15718,GO:0007099,centriole replication,process,1,2115
PF15721,GO:0038023,signaling receptor activity,function,8,1217
PF15723,GO:0044010,single-species biofilm formation,process,1,2116
PF15724,GO:0001503,ossification,process,4,323
PF15734,GO:0030336,negative regulation of cell migration,process,1,2117
PF15741,GO:0042974,nuclear retinoic acid receptor binding,function,1,2118
PF15745,GO:1900025,negative regulation of substrate adhesion-dependent cell spreading,process,1,2119
PF15748,GO:0005856,cytoskeleton,component,6,260
PF15750,GO:0043130,ubiquitin binding,function,8,873
PF15754,GO:0007340,acrosome reaction,process,1,2120
PF15756,GO:0051216,cartilage development,process,1,2121
PF15757,GO:0070175,positive regulation of enamel mineralization,process,1,2122
PF15761,GO:0005634,nucleus,component,149,411
PF15771,GO:0042138,meiotic DNA double-strand break formation,process,4,1995
PF15773,GO:0070840,dynein complex binding,function,3,2123
PF15785,GO:0000184,"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",process,3,1790
PF15798,GO:0048011,neurotrophin TRK receptor signaling pathway,process,1,2124
PF15800,GO:0042754,negative regulation of circadian rhythm,process,1,2125
PF15802,GO:0016567,protein ubiquitination,process,11,2094
PF15806,GO:0043014,alpha-tubulin binding,function,1,2126
PF15812,GO:0032402,melanosome transport,process,1,2127
PF15826,GO:0090200,positive regulation of release of cytochrome c from mitochondria,process,1,2128
PF15836,GO:0051087,protein-folding chaperone binding,function,4,710
PF15838,GO:0007342,fusion of sperm to egg plasma membrane involved in single fertilization,process,6,678
PF15847,GO:0030280,structural constituent of skin epidermis,function,1,2129
PF15854,GO:0001664,G protein-coupled receptor binding,function,2,2054
PF15880,GO:0005747,mitochondrial respiratory chain complex I,component,5,2013
PF15886,GO:0030246,carbohydrate binding,function,20,59
PF15894,GO:0046325,negative regulation of glucose import,process,1,2130
PF15898,GO:0019901,protein kinase binding,function,4,954
PF15925,GO:0070876,SOSS complex,component,1,2131
PF15937,GO:0001558,regulation of cell growth,process,1,2132
PF15952,GO:0007423,sensory organ development,process,1,2133
PF15953,GO:0005198,structural molecule activity,function,90,30
PF15957,GO:0007411,axon guidance,process,2,2100
PF15964,GO:0007098,centrosome cycle,process,1,2134
PF15965,GO:0008270,zinc ion binding,function,101,229
PF15966,GO:0005515,protein binding,function,122,10
PF15971,GO:0004169,dolichyl-phosphate-mannose-protein mannosyltransferase activity,function,1,2135
PF15972,GO:0001700,embryonic development via the syncytial blastoderm,process,1,2136
PF15985,GO:0003723,RNA binding,function,118,6
PF16006,GO:0000281,mitotic cytokinesis,process,1,2137
PF16011,GO:0016052,carbohydrate catabolic process,process,3,1468
PF16045,GO:0005515,protein binding,function,122,10
PF16047,GO:0042742,defense response to bacterium,process,23,591
PF16048,GO:0006952,defense response,process,23,149
PF16049,GO:0006952,defense response,process,23,149
PF16053,GO:0005739,mitochondrion,component,27,1358
PF16074,GO:0043683,type IV pilus assembly,process,3,2138
PF16093,GO:0043248,proteasome assembly,process,7,1843
PF16094,GO:0043248,proteasome assembly,process,7,1843
PF16099,GO:0000166,nucleotide binding,function,30,57
PF16178,GO:0046983,protein dimerization activity,function,22,4
PF16251,GO:0003676,nucleic acid binding,function,32,39
PF16257,GO:0016853,isomerase activity,function,9,454
PF16276,GO:0003676,nucleic acid binding,function,32,39
PF16317,GO:0016798,"hydrolase activity, acting on glycosyl bonds",function,3,659
PF16320,GO:0005840,ribosome,component,86,74
PF16326,GO:0003677,DNA binding,function,320,19
PF16331,GO:0070206,protein trimerization,process,1,2139
PF16358,GO:0035556,intracellular signal transduction,process,8,240
PF16367,GO:0003723,RNA binding,function,118,6
PF16411,GO:2001070,starch binding,function,4,263
PF16421,GO:0046983,protein dimerization activity,function,22,4
PF16422,GO:0003677,DNA binding,function,320,19
PF16452,GO:0051259,protein complex oligomerization,process,3,1594
PF16499,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF16517,GO:0007165,signal transduction,process,34,8
PF16519,GO:0051262,protein tetramerization,process,3,806
PF16525,GO:0020037,heme binding,function,26,17
PF16537,GO:0015627,type II protein secretion system complex,component,6,2140
PF16554,GO:0046983,protein dimerization activity,function,22,4
PF16557,GO:0003677,DNA binding,function,320,19
PF16590,GO:0005186,pheromone activity,function,3,918
PF16647,GO:0045639,positive regulation of myeloid cell differentiation,process,1,2141
PF16649,GO:0005125,cytokine activity,function,10,468
PF16656,GO:0003993,acid phosphatase activity,function,1,2142
PF16668,GO:0007155,cell adhesion,process,28,363
PF16671,GO:0007015,actin filament organization,process,4,2143
PF16672,GO:0043154,negative regulation of cysteine-type endopeptidase activity involved in apoptotic process,process,1,2144
PF16683,GO:0016755,aminoacyltransferase activity,function,3,764
PF16685,GO:0061630,ubiquitin protein ligase activity,function,7,1733
PF16686,GO:0043047,single-stranded telomeric DNA binding,function,2,2145
PF16711,GO:0003779,actin binding,function,13,111
PF16714,GO:0003723,RNA binding,function,118,6
PF16715,GO:0016755,aminoacyltransferase activity,function,3,764
PF16716,GO:0051607,defense response to virus,process,4,628
PF16719,GO:0003682,chromatin binding,function,4,520
PF16732,GO:0043683,type IV pilus assembly,process,3,2138
PF16746,GO:0005737,cytoplasm,component,103,370
PF16752,GO:0015631,tubulin binding,function,5,182
PF16754,GO:0003796,lysozyme activity,function,4,1338
PF16760,GO:2001070,starch binding,function,4,263
PF16782,GO:0000774,adenyl-nucleotide exchange factor activity,function,2,372
PF16785,GO:0046872,metal ion binding,function,48,38
PF16787,GO:0003677,DNA binding,function,320,19
PF16790,GO:0006260,DNA replication,process,57,300
PF16794,GO:0005515,protein binding,function,122,10
PF16796,GO:0008017,microtubule binding,function,17,712
PF16818,GO:0071986,Ragulator complex,component,3,2146
PF16834,GO:0097196,Shu complex,component,2,2147
PF16836,GO:0097196,Shu complex,component,2,2147
PF16839,GO:0098542,defense response to other organism,process,4,1628
PF16845,GO:0004869,cysteine-type endopeptidase inhibitor activity,function,3,13
PF16850,GO:0004867,serine-type endopeptidase inhibitor activity,function,11,7
PF16855,GO:0019028,viral capsid,component,65,138
PF16867,GO:0047869,dimethylpropiothetin dethiomethylase activity,function,1,2148
PF16892,GO:0046983,protein dimerization activity,function,22,4
PF16906,GO:0015934,large ribosomal subunit,component,2,608
PF16917,GO:0036211,protein modification process,process,6,721
PF16929,GO:0015031,protein transport,process,20,156
PF16934,GO:0050830,defense response to Gram-positive bacterium,process,3,2019
PF16941,GO:0098657,import into cell,process,1,2149
PF16944,GO:0015079,potassium ion transmembrane transporter activity,function,2,852
PF16952,GO:0006542,glutamine biosynthetic process,process,2,1085
PF16954,GO:0015232,heme transmembrane transporter activity,function,2,987
PF16957,GO:0016740,transferase activity,function,18,291
PF16965,GO:0006874,intracellular calcium ion homeostasis,process,2,2150
PF16969,GO:0005786,"signal recognition particle, endoplasmic reticulum targeting",component,2,741
PF16970,GO:0007155,cell adhesion,process,28,363
PF16974,GO:0015706,nitrate transmembrane transport,process,1,2151
PF16981,GO:0090729,toxin activity,function,13,410
PF16983,GO:0015689,molybdate ion transport,process,2,2152
PF16990,GO:0030246,carbohydrate binding,function,20,59
PF16993,GO:0015031,protein transport,process,20,156
PF17001,GO:0030254,protein secretion by the type III secretion system,process,3,1388
PF17049,GO:0006417,regulation of translation,process,1,2153
PF17050,GO:0044284,mitochondrial crista junction,component,1,2154
PF17051,GO:0033617,mitochondrial cytochrome c oxidase assembly,process,4,1822
PF17052,GO:0005845,mRNA cap binding complex,component,2,2155
PF17053,GO:0000002,mitochondrial genome maintenance,process,4,1968
PF17056,GO:0031505,fungal-type cell wall organization,process,2,2156
PF17060,GO:0071988,protein localization to spindle pole body,process,1,2157
PF17064,GO:0030431,sleep,process,1,2158
PF17066,GO:0051168,nuclear export,process,1,2159
PF17067,GO:0005840,ribosome,component,86,74
PF17068,GO:0000002,mitochondrial genome maintenance,process,4,1968
PF17070,GO:0005840,ribosome,component,86,74
PF17076,GO:0031505,fungal-type cell wall organization,process,2,2156
PF17077,GO:0015630,microtubule cytoskeleton,component,2,1357
PF17078,GO:0048309,endoplasmic reticulum inheritance,process,1,2160
PF17079,GO:0007291,sperm individualization,process,1,2161
PF17082,GO:0005823,central plaque of spindle pole body,component,1,2162
PF17085,GO:0045667,regulation of osteoblast differentiation,process,1,2163
PF17095,GO:0031175,neuron projection development,process,1,2164
PF17096,GO:0030479,actin cortical patch,component,1,2165
PF17097,GO:0000775,"chromosome, centromeric region",component,6,2166
PF17098,GO:0000381,"regulation of alternative mRNA splicing, via spliceosome",process,2,1810
PF17112,GO:0030150,protein import into mitochondrial matrix,process,3,1629
PF17136,GO:0005840,ribosome,component,86,74
PF17144,GO:0008097,5S rRNA binding,function,1,2167
PF17175,GO:0005892,acetylcholine-gated channel complex,component,1,2168
PF17204,GO:0035194,regulatory ncRNA-mediated post-transcriptional gene silencing,process,1,2169
PF17209,GO:0003723,RNA binding,function,118,6
PF17222,GO:0004197,cysteine-type endopeptidase activity,function,28,225
PF17223,GO:0042302,structural constituent of cuticle,function,4,528
PF17232,GO:0045087,innate immune response,process,3,1640
PF17237,GO:0007008,outer mitochondrial membrane organization,process,1,2170
PF17256,GO:0005680,anaphase-promoting complex,component,8,1110
PF17257,GO:0009507,chloroplast,component,3,1535
PF17297,GO:0004611,phosphoenolpyruvate carboxykinase activity,function,2,310
PF17308,GO:0045823,positive regulation of heart contraction,process,1,2171
PF17312,GO:0042742,defense response to bacterium,process,23,591
PF17317,GO:0000750,pheromone-dependent signal transduction involved in conjugation with cellular fusion,process,1,2172
PF17321,GO:0000011,vacuole inheritance,process,1,2173
PF17323,GO:0016020,membrane,component,541,64
PF17327,GO:0061579,N-acyl homoserine lactone synthase activity,function,1,2174
PF17333,GO:0042742,defense response to bacterium,process,23,591
PF17335,GO:0031011,Ino80 complex,component,4,1239
PF17357,GO:0015891,siderophore transport,process,1,2175
PF17366,GO:0050839,cell adhesion molecule binding,function,1,2176
PF17378,GO:0042138,meiotic DNA double-strand break formation,process,4,1995
PF17411,GO:0009036,type II site-specific deoxyribonuclease activity,function,24,898
PF17433,GO:0004553,"hydrolase activity, hydrolyzing O-glycosyl compounds",function,37,109
PF17475,GO:0051260,protein homooligomerization,process,3,172
PF17527,GO:0039653,suppression by virus of host transcription,process,1,2177
PF17528,GO:0006547,histidine metabolic process,process,2,2178
PF17531,GO:0019076,viral release from host cell,process,4,1608
PF17538,GO:0003677,DNA binding,function,320,19
PF17541,GO:0033103,protein secretion by the type VI secretion system,process,1,2179
PF17548,GO:0003677,DNA binding,function,320,19
PF17549,GO:0039693,viral DNA genome replication,process,4,1497
PF17563,GO:0042742,defense response to bacterium,process,23,591
PF17642,GO:1901998,toxin transport,process,1,2180
PF17649,GO:0034272,"phosphatidylinositol 3-kinase complex, class III, type II",component,1,2181
PF17659,GO:0003697,single-stranded DNA binding,function,14,189
PF17664,GO:0060271,cilium assembly,process,5,2182
PF17672,GO:0007342,fusion of sperm to egg plasma membrane involved in single fertilization,process,6,678
PF17716,GO:0000423,mitophagy,process,2,2183
PF17720,GO:0000302,response to reactive oxygen species,process,1,2184
PF17752,GO:0051097,negative regulation of helicase activity,process,1,2185
PF17764,GO:0003677,DNA binding,function,320,19
PF17785,GO:0003723,RNA binding,function,118,6
PF17825,GO:0000712,resolution of meiotic recombination intermediates,process,1,2186
PF17879,GO:0003690,double-stranded DNA binding,function,5,127
PF17907,GO:0042054,histone methyltransferase activity,function,2,1276
PF17951,GO:0004317,(3R)-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity,function,1,2187
PF18024,GO:0003677,DNA binding,function,320,19
PF18032,GO:0042651,thylakoid membrane,component,3,485
PF18089,GO:0016787,hydrolase activity,function,35,65
PF18209,GO:0010098,suspensor development,process,1,2188
PF18253,GO:0046983,protein dimerization activity,function,22,4
PF18325,GO:0008897,holo-[acyl-carrier-protein] synthase activity,function,2,574
PF18329,GO:0030247,polysaccharide binding,function,3,1994
PF18361,GO:0003697,single-stranded DNA binding,function,14,189
PF18392,GO:0010387,COP9 signalosome assembly,process,1,2189
PF18465,GO:0051536,iron-sulfur cluster binding,function,15,44
PF18507,GO:0005515,protein binding,function,122,10
PF18608,GO:0006915,apoptotic process,process,10,658
PF18652,GO:0005618,cell wall,component,7,502
PF18678,GO:0017000,antibiotic biosynthetic process,process,3,613
PF18699,GO:0032543,mitochondrial translation,process,1,2190
PF18872,GO:0005515,protein binding,function,122,10
PF18876,GO:0005634,nucleus,component,149,411
PF18916,GO:0016872,intramolecular lyase activity,function,1,2191
PF18927,GO:0016746,acyltransferase activity,function,9,88
PF18947,GO:0007165,signal transduction,process,34,8
PF18972,GO:0051879,Hsp90 protein binding,function,1,2192
PF19021,GO:0099048,CRISPR-cas system,process,1,2193
PF19031,GO:0016192,vesicle-mediated transport,process,22,249
PF19032,GO:0016192,vesicle-mediated transport,process,22,249
PF19033,GO:0016192,vesicle-mediated transport,process,22,249
PF19034,GO:0004521,RNA endonuclease activity,function,6,223
PF19035,GO:0007165,signal transduction,process,34,8
PF19036,GO:0016192,vesicle-mediated transport,process,22,249
PF19037,GO:0016192,vesicle-mediated transport,process,22,249
PF19038,GO:0016192,vesicle-mediated transport,process,22,249
PF19039,GO:0000165,MAPK cascade,process,2,2194
PF19041,GO:0005846,nuclear cap binding complex,component,3,2195
PF19042,GO:0005846,nuclear cap binding complex,component,3,2195
PF19043,GO:0005846,nuclear cap binding complex,component,3,2195
PF19045,GO:0043758,acetate-CoA ligase (ADP-forming) activity,function,1,2196
PF19046,GO:0005801,cis-Golgi network,component,1,2197
PF19047,GO:0030705,cytoskeleton-dependent intracellular transport,process,1,2198
PF19048,GO:0106274,NAD+-protein-arginine ADP-ribosyltransferase activity,function,2,414
PF19049,GO:0016579,protein deubiquitination,process,3,192
PF19052,GO:0045930,negative regulation of mitotic cell cycle,process,1,2199
PF19055,GO:0140359,ABC-type transporter activity,function,7,257
PF19060,GO:0051276,chromosome organization,process,9,606
PF19088,GO:0016779,nucleotidyltransferase activity,function,8,600
PF19097,GO:0003729,mRNA binding,function,6,1614
PF19112,GO:0016491,oxidoreductase activity,function,68,22
PF19117,GO:0070096,mitochondrial outer membrane translocase complex assembly,process,1,2200
PF19188,GO:0004930,G protein-coupled receptor activity,function,11,0
PF19189,GO:0005739,mitochondrion,component,27,1358
PF19221,GO:0051301,cell division,process,9,395
PF19225,GO:0010520,regulation of reciprocal meiotic recombination,process,1,2201
PF19252,GO:0046540,U4/U6 x U5 tri-snRNP complex,component,2,901
PF19298,GO:0008203,cholesterol metabolic process,process,2,1436
PF19315,GO:0016829,lyase activity,function,20,268
PF19325,GO:0061630,ubiquitin protein ligase activity,function,7,1733
PF19326,GO:0003876,AMP deaminase activity,function,1,2202
PF19335,GO:0046872,metal ion binding,function,48,38
PF19368,GO:0003677,DNA binding,function,320,19
PF19429,GO:0019957,C-C chemokine binding,function,1,2203
PF19431,GO:0000165,MAPK cascade,process,2,2194
PF19444,GO:0008289,lipid binding,function,11,449
PF19567,GO:0004725,protein tyrosine phosphatase activity,function,6,2204
PF19580,GO:0003824,catalytic activity,function,50,132
PF19581,GO:0046677,response to antibiotic,process,10,978
PF19697,GO:0043539,protein serine/threonine kinase activator activity,function,2,622
PF19704,GO:0006303,double-strand break repair via nonhomologous end joining,process,5,858
PF19729,GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process,process,1,2205
PF19778,GO:0015668,type III site-specific deoxyribonuclease activity,function,1,2206
PF19977,GO:1904868,telomerase catalytic core complex assembly,process,1,2207
PF20085,GO:0003810,protein-glutamine gamma-glutamyltransferase activity,function,3,1738
PF20144,GO:0006355,regulation of DNA-templated transcription,process,182,86
PF20162,GO:1902412,regulation of mitotic cytokinesis,process,1,2208
PF20170,GO:0017154,semaphorin receptor activity,function,2,1664
PF20180,GO:0034551,mitochondrial respiratory chain complex III assembly,process,3,2027
PF20432,GO:0003677,DNA binding,function,320,19
PF20441,GO:0004519,endonuclease activity,function,25,356
PF20450,GO:0003677,DNA binding,function,320,19
PF20454,GO:0004519,endonuclease activity,function,25,356
PF20490,GO:0005615,extracellular space,component,21,129
PF20491,GO:0007015,actin filament organization,process,4,2143
PF20496,GO:0035861,site of double-strand break,component,1,2209
PF20511,GO:0004476,mannose-6-phosphate isomerase activity,function,2,1865
PF20543,GO:0009399,nitrogen fixation,process,7,947
PF20661,GO:0005515,protein binding,function,122,10
PF20711,GO:0010027,thylakoid membrane organization,process,1,2210
PF20729,GO:0004190,aspartic-type endopeptidase activity,function,9,452
PF20932,GO:0031054,pre-miRNA processing,process,1,2211
PF20945,GO:0042134,rRNA primary transcript binding,function,1,2212
PF21041,GO:0015631,tubulin binding,function,5,182
PF21042,GO:0005515,protein binding,function,122,10
PF21045,GO:0016180,snRNA processing,process,1,2213
PF21071,GO:0000339,RNA cap binding,function,1,2214
PF21111,GO:0004530,deoxyribonuclease I activity,function,1,2215
PF21138,GO:0003723,RNA binding,function,118,6
PF21179,GO:0045892,negative regulation of DNA-templated transcription,process,15,884
PF21201,GO:0015459,potassium channel regulator activity,function,1,2216
PF21225,GO:0008270,zinc ion binding,function,101,229
PF21229,GO:0003677,DNA binding,function,320,19
PF21276,GO:0008270,zinc ion binding,function,101,229
PF21342,GO:0009055,electron transfer activity,function,20,14
PF21367,GO:0008270,zinc ion binding,function,101,229
PF21373,GO:0005515,protein binding,function,122,10
PF21374,GO:0030247,polysaccharide binding,function,3,1994
PF21410,GO:0005874,microtubule,component,3,2217
PF21438,GO:0003677,DNA binding,function,320,19
PF21457,GO:0008270,zinc ion binding,function,101,229
PF21524,GO:0003677,DNA binding,function,320,19
PF21531,GO:0003677,DNA binding,function,320,19
PF21533,GO:0008270,zinc ion binding,function,101,229
PF21662,GO:0005515,protein binding,function,122,10
PF21663,GO:0016791,phosphatase activity,function,8,115
PF21665,GO:0009306,protein secretion,process,11,123
PF21729,GO:0045492,xylan biosynthetic process,process,1,2218
PF21730,GO:0070072,vacuolar proton-transporting V-type ATPase complex assembly,process,4,1706
PF21767,GO:0005515,protein binding,function,122,10
PF21816,GO:0008270,zinc ion binding,function,101,229