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counts/Breast-AdenoCa1_counts.pkl

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counts/Breast-AdenoCa2_counts.pkl

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counts/CNS-PiloAstro1_counts.pkl

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counts/CNS-PiloAstro2_counts.pkl

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counts/Eso-AdenoCa1_counts.pkl

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counts/Eso-AdenoCa2_counts.pkl

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counts/Eso-AdenoCa3_counts.pkl

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counts/Kidney-RCC_counts.pkl

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counts/Liver-HCC1_counts.pkl

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counts/Liver-HCC2_counts.pkl

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counts/Lymph-MCLL1_counts.pkl

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counts/Lymph-MCLL2_counts.pkl

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counts/Lymph-UCLL1_counts.pkl

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counts/Lymph-UCLL2_counts.pkl

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counts/Panc-Endocrine1_counts.pkl

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counts/Panc-Endocrine2_counts.pkl

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counts/Prost-AdenoCA_counts.pkl

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counts/counts_correction_rates.csv

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+mutations,clean,max,min,tumor
+DEL,0,100,0,Breast-AdenoCa
+DNP,0,1.5,0,Breast-AdenoCa
+INS,0,6,0,Breast-AdenoCa
+TNP,0,100,0,Breast-AdenoCa
+SBS1,0,100,0,Breast-AdenoCa
+SBS2,0,60,0,Breast-AdenoCa
+SBS3,10,100,0,Breast-AdenoCa
+SBS5,0,100,0,Breast-AdenoCa
+SBS8,10,40,0,Breast-AdenoCa
+SBS13,0,60,0,Breast-AdenoCa
+SBS18,5,100,0,Breast-AdenoCa
+DEL,0,100,0,CNS-PiloAstro
+DNP,0,100,0,CNS-PiloAstro
+INS,0,100,0,CNS-PiloAstro
+SBS1,0,45,5,CNS-PiloAstro
+SBS5,0,100,30,CNS-PiloAstro
+SBS8,10,40,0,CNS-PiloAstro
+SBS19,5,40,0,CNS-PiloAstro
+SBS23,5,40,0,CNS-PiloAstro
+DEL,0,100,0,Eso-AdenoCa
+DNP,0,100,0.1,Eso-AdenoCa
+TNP,0,100,0,Eso-AdenoCa
+INS,0,100,0,Eso-AdenoCa
+SBS1,0,100,1,Eso-AdenoCa
+SBS2,2,100,0,Eso-AdenoCa
+SBS5,0,70,0,Eso-AdenoCa
+SBS8,5,30,12,Eso-AdenoCa
+SBS10c,5,12,10,Eso-AdenoCa
+SBS13,1,13,0,Eso-AdenoCa
+SBS17a,0,30,0,Eso-AdenoCa
+SBS17b,0,100,0,Eso-AdenoCa
+SBS18,5,100,0,Eso-AdenoCa
+SBS28,5,100,0,Eso-AdenoCa
+DEL,0,15,0,Kidney-RCC
+DNP,0,2,0,Kidney-RCC
+INS,0,5,0,Kidney-RCC
+TNP,0,0.1,0,Kidney-RCC
+SBS1,0,10,0,Kidney-RCC
+SBS5,1,100,0,Kidney-RCC
+SBS22,5,100,0,Kidney-RCC
+SBS40,25,100,0,Kidney-RCC
+DEL,0,40,0,Liver-HCC
+DNP,0,4,0,Liver-HCC
+INS,0,20,0,Liver-HCC
+TNP,0,100,0,Liver-HCC
+SBS1,0,100,0,Liver-HCC
+SBS4,10,100,0,Liver-HCC
+SBS5,2.5,100,0,Liver-HCC
+SBS8,5,30,12,Liver-HCC
+SBS12,5,100,0,Liver-HCC
+SBS16,5,100,0,Liver-HCC
+SBS35,5,40,0,Liver-HCC
+SBS40,10,100,0,Liver-HCC
+DEL,0,6,0,Lymph-MCLL
+DNP,0,100,0,Lymph-MCLL
+INS,0,100,0,Lymph-MCLL
+TNP,0,100,0,Lymph-MCLL
+SBS1,0,15,0,Lymph-MCLL
+SBS5,10,100,0,Lymph-MCLL
+SBS8,5,100,0,Lymph-MCLL
+SBS9,10,100,0,Lymph-MCLL
+DEL,0,100,0,Lymph-UCLL
+DNP,0,100,0,Lymph-UCLL
+INS,0,100,0,Lymph-UCLL
+TNP,0,100,0,Lymph-UCLL
+SBS1,0,20,0,Lymph-UCLL
+SBS5,0,100,50,Lymph-UCLL
+SBS8,12.5,40,0,Lymph-UCLL
+DEL,0,10,0,Panc-Endocrine
+DNP,0,1,0,Panc-Endocrine
+INS,0,6,0,Panc-Endocrine
+TNP,0,100,0,Panc-Endocrine
+SBS1,0,30,0,Panc-Endocrine
+SBS2,2,100,0,Panc-Endocrine
+SBS5,5,100,0,Panc-Endocrine
+SBS8,15,50,0,Panc-Endocrine
+SBS13,3,30,0,Panc-Endocrine
+SBS19,5,40,0,Panc-Endocrine
+SBS30,2,20,7,Panc-Endocrine
+SBS36,5,100,0,Panc-Endocrine
+DEL,0,30,0,Prost-AdenoCA
+DNP,0,2,0,Prost-AdenoCA
+INS,0,20,0,Prost-AdenoCA
+TNP,0,0.15,0,Prost-AdenoCA
+SBS1,0,40,0,Prost-AdenoCA
+SBS5,0,80,0,Prost-AdenoCA
+SBS8,5,35,15,Prost-AdenoCA
+SBS37,10,50,0,Prost-AdenoCA
+SBS40,15,75,25,Prost-AdenoCA

counts/counts_exclusions.csv

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+signatureA,signatureB,tumor
+SBS8,SBS18,Eso-AdenoCa
+SBS10c,SBS18,Eso-AdenoCa
+SBS10c,SBS28,Eso-AdenoCa
+SBS4,SBS8,Liver-HCC
+SBS4,SBS35,Liver-HCC
+SBS8,SBS37,Prost-AdenoCA

drivers/Breast-AdenoCa_driver_mutations.csv

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+chrom,start,mut,ref,alt,driver
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+4,143227640,SNP,T,C,INPP4B_Intron
+4,143280771,SNP,A,G,INPP4B_Intron
+4,143382953,SNP,A,G,INPP4B_Intron
+4,143552190,SNP,C,A,INPP4B_Intron
+6,152203833,SNP,C,G,ESR1_Intron
+6,157339741,SNP,T,G,ARID1B_Intron
+X,38142361,SNP,C,G,RPGR_Intron
+X,38146072,SNP,A,C,RPGR_Intron
+X,123398219,SNP,T,A,STAG2_Intron
+10,61903283,DEL,TTTCACTTACTAAAAAGGAGCTGTGTAGG,T,ANK3_Intron
+12,64352555,DEL,AACCTT,A,SRGAP1_Intron
+X,123221298,DEL,TTCTGGTACCTCAGCCAGGAAGGCTCAAAGGCTGGTGGC,T,STAG2_Intron
+16,67083505,SNP,C,T,CBFB_Intron
+17,41270062,SNP,G,A,BRCA1_Intron
+3,185088847,SNP,G,T,MAP3K13_Intron
+4,143302606,SNP,C,T,INPP4B_Intron
+4,143630008,SNP,C,G,INPP4B_Intron
+X,123178834,SNP,A,G,STAG2_Intron
+1,120500323,SNP,G,T,NOTCH2_Intron
+1,235422393,SNP,C,A,ARID4B_Intron
+10,62473382,SNP,T,C,ANK3_Intron
+10,89642473,SNP,G,C,PTEN_Intron
+12,64366908,SNP,A,G,SRGAP1_Intron
+12,64382612,SNP,A,T,SRGAP1_Intron
+12,64424026,SNP,T,A,SRGAP1_Intron
+16,68810156,SNP,T,C,CDH1_Intron
+19,50740267,SNP,G,A,MYH14_Intron
+2,212270888,SNP,G,A,ERBB4_Intron
+2,212892991,SNP,G,T,ERBB4_Intron
+2,212893898,SNP,C,T,ERBB4_Intron
+2,213067585,SNP,A,G,ERBB4_Intron
+21,36314999,SNP,C,T,RUNX1_Intron
+21,36350607,SNP,A,T,RUNX1_Intron
+21,36408685,SNP,C,A,RUNX1_Intron
+21,36813245,SNP,C,A,RUNX1_Intron
+22,29122607,SNP,C,A,CHEK2_Intron
+22,29124999,SNP,T,G,CHEK2_Intron
+3,138394202,SNP,T,A,PIK3CB_Intron
+3,138394732,SNP,G,C,PIK3CB_Intron
+3,138439396,SNP,G,T,PIK3CB_Intron
+4,143162943,SNP,G,T,INPP4B_Intron
+4,143372535,SNP,C,T,INPP4B_Intron
+4,143671226,SNP,G,T,INPP4B_Intron
+6,157238261,SNP,A,T,ARID1B_Intron
+X,123150444,SNP,A,C,STAG2_Intron
+X,123174964,SNP,G,C,STAG2_Intron
+X,123385101,SNP,G,T,STAG2_Intron
+X,123443206,SNP,G,C,STAG2_Intron
+6,157265320,DEL,AA,A,ARID1B_Intron
+X,38183356,DEL,AAGACAGGGTCTCACTCTGTC,A,RPGR_Intron
+12,64498086,SNP,G,T,SRGAP1_Intron
+15,28394453,SNP,A,C,HERC2_Intron
+3,138397869,SNP,C,T,PIK3CB_Intron
+3,178936101,SNP,A,C,PIK3CA_Coding
+4,143095972,SNP,T,C,INPP4B_Intron
+X,123316952,SNP,G,A,STAG2_Intron
+17,7573998,DEL,CCT,C,TP53_Coding
+X,123459578,DEL,TTATAAATGAG,T,STAG2_Intron
+1,120494440,SNP,A,T,NOTCH2_Intron
+1,235334784,SNP,T,A,ARID4B_Intron
+10,61983233,SNP,C,A,ANK3_Intron
+10,62102509,SNP,G,T,ANK3_Intron
+10,62189361,SNP,T,C,ANK3_Intron
+10,62337256,SNP,A,G,ANK3_Intron
+10,89691297,SNP,T,G,PTEN_Intron
+17,16076600,SNP,C,T,NCOR1_Intron
+2,212276737,SNP,T,A,ERBB4_Intron
+2,212307793,SNP,T,C,ERBB4_Intron
+2,212382514,SNP,G,A,ERBB4_Intron
+2,212894122,SNP,G,C,ERBB4_Intron
+2,212968401,SNP,G,T,ERBB4_Intron
+2,212986274,SNP,T,A,ERBB4_Intron
+2,213084908,SNP,T,A,ERBB4_Intron
+2,213169032,SNP,C,A,ERBB4_Intron
+4,143263020,SNP,A,T,INPP4B_Intron
+4,143502371,SNP,A,T,INPP4B_Intron
+4,143523215,SNP,G,C,INPP4B_Intron
+4,143580476,SNP,G,A,INPP4B_Intron
+6,152058258,SNP,C,G,ESR1_Intron
+6,152268411,SNP,A,G,ESR1_Intron
+6,157294095,SNP,C,T,ARID1B_Intron
+6,157296306,SNP,T,C,ARID1B_Intron
+6,168329825,SNP,T,C,MLLT4_Intron
+X,100605697,SNP,A,T,BTK_Intron
+X,123227143,SNP,G,A,STAG2_Intron
+17,59806910,DEL,AAGAAGTGAAAGTCACTGCCTGTC,A,BRIP1_Intron
+4,143726501,DEL,AATAATAAATAGAAAAAGAATGGATGG,A,INPP4B_Intron
+X,123224005,DEL,TTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGTTTAGTCCTTGTTTCCTGCCTTAGTGTTCTTGCTT,T,STAG2_Intron
+17,7578212,SNP,G,A,TP53_Coding
+17,11924924,SNP,G,C,MAP2K4_Intron
+19,50772550,SNP,C,A,MYH14_Intron
+2,212273403,SNP,T,C,ERBB4_Intron
+2,212408610,SNP,C,G,ERBB4_Intron
+3,138413807,SNP,C,G,PIK3CB_Intron
+3,185097368,SNP,G,T,MAP3K13_Intron
+3,185120967,SNP,G,A,MAP3K13_Intron
+4,143063525,SNP,G,A,INPP4B_Intron
+4,143082552,SNP,C,G,INPP4B_Intron
+6,157323668,SNP,C,G,ARID1B_Intron
+6,157386638,SNP,C,T,ARID1B_Intron
+X,123416546,SNP,C,G,STAG2_Intron
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+4,143730524,DEL,TTAAT,T,INPP4B_Intron
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+3,178952085,SNP,A,G,PIK3CA_Coding
+10,8111433,DEL,CCA,C,GATA3_Intron
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+10,61872094,SNP,T,C,ANK3_Intron
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+6,152279398,SNP,G,C,ESR1_Intron
+6,152281361,DEL,GG,G,ESR1_Intron
+12,64269220,SNP,G,T,SRGAP1_Intron
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+12,64269477,SNP,G,C,SRGAP1_Intron
+12,64269568,SNP,G,C,SRGAP1_Intron
+12,64269683,SNP,G,C,SRGAP1_Intron
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+12,64297537,SNP,C,T,SRGAP1_Intron
+12,64297667,SNP,C,T,SRGAP1_Intron
+12,64297812,SNP,C,T,SRGAP1_Intron
+19,50693107,SNP,G,C,MYH14_Intron
+2,212417930,SNP,G,A,ERBB4_Intron
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+21,36323597,SNP,A,T,RUNX1_Intron
+21,36817825,SNP,C,T,RUNX1_Intron
+21,36835683,SNP,C,A,RUNX1_Intron
+4,143187442,SNP,C,T,INPP4B_Intron
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+4,143592826,SNP,G,C,INPP4B_Intron
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+6,152304747,SNP,A,T,ESR1_Intron
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+X,123306375,SNP,G,T,STAG2_Intron
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+2,213015230,SNP,G,A,ERBB4_Intron
+3,138446433,SNP,A,T,PIK3CB_Intron
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+3,185174724,SNP,A,C,MAP3K13_Intron
+3,185190070,SNP,G,A,MAP3K13_Intron
+4,143726178,SNP,C,T,INPP4B_Intron
+6,157456841,SNP,A,G,ARID1B_Intron
+2,212302899,DEL,TTGATGGATTGGCCGAAA,T,ERBB4_Intron
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+12,64367646,SNP,A,G,SRGAP1_Intron
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+17,41269348,SNP,A,T,BRCA1_Intron
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+21,36328009,SNP,G,A,RUNX1_Intron
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+21,36328016,DEL,AAGC,A,RUNX1_Intron
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+15,28374737,DEL,GG,G,HERC2_Intron
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+3,178952085,SNP,A,G,PIK3CA_Coding
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+X,123136934,SNP,C,G,STAG2_Intron
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+X,123269434,SNP,G,T,STAG2_Intron
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+X,123360226,SNP,A,T,STAG2_Intron
+17,7579345,DEL,CCAAGAAGCCCAGA,C,TP53_Coding
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+21,36398725,SNP,G,A,RUNX1_Intron
+3,185048052,SNP,C,T,MAP3K13_Intron
+4,143024091,SNP,C,A,INPP4B_Intron
+4,143422566,SNP,C,G,INPP4B_Intron
+4,143423633,SNP,C,G,INPP4B_Intron
+5,56187237,SNP,G,T,MAP3K1_Intron
+6,157506612,SNP,A,G,ARID1B_Intron
+X,123347587,SNP,C,G,STAG2_Intron
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+17,7578190,SNP,T,C,TP53_Coding
+2,212650368,SNP,C,G,ERBB4_Intron
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+2,213323976,SNP,C,G,ERBB4_Intron
+21,36250962,SNP,C,T,RUNX1_Intron
+4,143308336,SNP,G,A,INPP4B_Intron
+4,143582183,SNP,G,A,INPP4B_Intron
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+6,157145802,SNP,G,C,ARID1B_Intron
+X,38165765,SNP,T,A,RPGR_Intron
+X,100618822,SNP,G,C,BTK_Intron
+X,123168709,SNP,T,A,STAG2_Intron
+X,123247734,SNP,C,G,STAG2_Intron
+X,123302500,SNP,C,T,STAG2_Intron
+X,123137437,INS,A,AT,STAG2_Intron
+1,235368057,SNP,T,C,ARID4B_Intron
+10,61951994,SNP,T,C,ANK3_Intron
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+10,70483463,SNP,G,C,CCAR1_Intron
+4,143231432,SNP,G,A,INPP4B_Intron
+X,123225024,SNP,G,A,STAG2_Intron
+X,123289511,SNP,C,A,STAG2_Intron
+4,143047420,DEL,CCTC,C,INPP4B_Intron
+6,168279183,DEL,AACATTTTGTCC,A,MLLT4_Intron
+X,123100758,DEL,AAGTTTTGCTCTTGTTGCCC,A,STAG2_Intron
+16,68824488,SNP,C,T,CDH1_Intron
+16,68825931,SNP,C,T,CDH1_Intron
+17,7579528,SNP,C,T,TP53_Coding
+2,212858430,SNP,G,A,ERBB4_Intron
+X,123114429,SNP,C,A,STAG2_Intron
+X,123450970,SNP,G,A,STAG2_Intron
+1,235350919,SNP,C,T,ARID4B_Intron
+10,89723578,SNP,C,T,PTEN_Intron
+3,178936094,SNP,C,A,PIK3CA_Coding
+4,143228361,SNP,C,T,INPP4B_Intron
+6,157372229,SNP,A,G,ARID1B_Intron
+10,8111433,DEL,CCA,C,GATA3_Intron
+17,16045664,DEL,TTACAGCATGGT,T,NCOR1_Intron
+6,157334023,INS,G,GT,ARID1B_Intron
+X,123153925,INS,A,ATGC,STAG2_Intron
+10,61820445,SNP,G,A,ANK3_Intron
+2,212917148,SNP,G,A,ERBB4_Intron
+2,213115098,SNP,G,C,ERBB4_Intron
+2,213290644,SNP,A,G,ERBB4_Intron
+3,178952085,SNP,A,G,PIK3CA_Coding
+6,152401202,SNP,C,T,ESR1_Intron
+6,157254951,SNP,A,C,ARID1B_Intron
+X,123230846,SNP,C,G,STAG2_Intron
+10,8115757,INS,T,TG,GATA3_Coding
+2,213161881,INS,A,AT,ERBB4_Intron
+3,178916640,DEL,AACTGTGGGGCATCCACTTGATGCCCCC,A,PIK3CA_Coding
+4,143251078,DEL,AAAAAAGCATTCAG,A,INPP4B_Intron
+1,235424285,SNP,C,A,ARID4B_Intron
+10,8107093,SNP,C,G,GATA3_Intron
+10,62446660,SNP,C,T,ANK3_Intron
+17,7576855,SNP,G,A,TP53_Coding
+17,59840142,SNP,T,G,BRIP1_Intron
+2,212627185,SNP,C,T,ERBB4_Intron
+2,212769308,SNP,C,G,ERBB4_Intron
+2,212948368,SNP,C,A,ERBB4_Intron
+3,178916924,SNP,C,T,PIK3CA_Coding
+3,178952085,SNP,A,G,PIK3CA_Coding
+6,157101110,SNP,G,A,ARID1B_Intron
+6,157250682,SNP,G,A,ARID1B_Intron
+X,123338559,SNP,C,T,STAG2_Intron
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+3,178936091,SNP,G,A,PIK3CA_Coding
+10,8111433,DEL,CCA,C,GATA3_Intron
+10,70503861,SNP,C,T,CCAR1_Intron
+17,16017900,SNP,C,T,NCOR1_Intron
+6,152323074,SNP,G,C,ESR1_Intron
+1,235439820,SNP,G,A,ARID4B_Intron
+2,212942689,SNP,T,C,ERBB4_Intron
+21,36355902,SNP,C,T,RUNX1_Intron
+16,68811062,DEL,CC,C,CDH1_Intron
+3,178916920,DEL,GGAACCA,G,PIK3CA_Coding
+1,120487498,SNP,G,A,NOTCH2_Intron
+1,120503620,SNP,G,A,NOTCH2_Intron
+1,235357936,DNP,GA,AT,ARID4B_Intron
+1,235375279,SNP,C,A,ARID4B_Intron
+1,235401386,SNP,G,C,ARID4B_Intron
+1,235417449,SNP,C,G,ARID4B_Intron
+1,235417508,SNP,C,G,ARID4B_Intron
+10,8102598,SNP,G,T,GATA3_Intron
+10,8106058,SNP,T,A,GATA3_Coding
+10,61863549,SNP,C,G,ANK3_Intron
+10,62013357,SNP,C,G,ANK3_Intron
+10,62286473,SNP,G,C,ANK3_Intron
+10,62298727,SNP,G,A,ANK3_Intron
+10,62392691,SNP,G,C,ANK3_Intron
+10,70529475,SNP,G,A,CCAR1_Intron
+12,64308027,SNP,G,A,SRGAP1_Intron
+12,64387956,SNP,G,A,SRGAP1_Intron
+12,64437174,SNP,G,C,SRGAP1_Intron
+12,64457399,SNP,G,A,SRGAP1_Intron
+12,64467044,SNP,G,A,SRGAP1_Intron
+15,28421519,SNP,C,T,HERC2_Intron
+15,28513155,SNP,C,T,HERC2_Intron
+16,67077337,SNP,G,T,CBFB_Intron
+16,67085686,SNP,C,G,CBFB_Intron
+16,67085946,SNP,C,T,CBFB_Intron
+16,67085961,SNP,C,T,CBFB_Intron
+16,67086886,SNP,C,G,CBFB_Intron
+16,68806008,SNP,C,T,CDH1_Intron
+16,68825436,SNP,C,A,CDH1_Intron
+17,11943592,SNP,G,A,MAP2K4_Intron
+17,16007807,SNP,G,T,NCOR1_Intron
+17,16008456,SNP,G,T,NCOR1_Intron
+17,16115523,SNP,G,C,NCOR1_Intron
+17,16116040,SNP,G,A,NCOR1_Intron
+17,59803184,SNP,C,T,BRIP1_Intron
+17,59823012,SNP,G,C,BRIP1_Intron
+17,59877136,SNP,C,T,BRIP1_Intron
+17,59900705,SNP,G,C,BRIP1_Intron
+2,212254886,SNP,C,T,ERBB4_Intron
+2,212344347,SNP,C,A,ERBB4_Intron
+2,212450236,SNP,G,C,ERBB4_Intron
+2,212475562,SNP,C,G,ERBB4_Intron
+2,212476263,SNP,G,A,ERBB4_Intron
+2,212557722,SNP,G,C,ERBB4_Intron
+2,212684806,SNP,C,G,ERBB4_Intron
+2,212699593,SNP,G,C,ERBB4_Intron
+2,212781138,SNP,C,G,ERBB4_Intron
+2,212781577,SNP,C,A,ERBB4_Intron
+2,212903691,SNP,G,A,ERBB4_Intron
+2,212910256,SNP,C,T,ERBB4_Intron
+2,212910531,SNP,C,T,ERBB4_Intron
+2,212910678,SNP,C,T,ERBB4_Intron
+2,212911643,SNP,C,A,ERBB4_Intron
+2,212912460,SNP,C,G,ERBB4_Intron
+2,212947630,SNP,C,G,ERBB4_Intron
+2,212949121,SNP,G,T,ERBB4_Intron
+2,212984539,SNP,G,C,ERBB4_Intron
+2,213003646,SNP,G,C,ERBB4_Intron
+2,213055596,SNP,G,A,ERBB4_Intron
+2,213189176,SNP,G,T,ERBB4_Intron
+2,213222223,SNP,G,C,ERBB4_Intron
+2,213291596,SNP,G,A,ERBB4_Intron
+2,213313817,SNP,C,T,ERBB4_Intron
+2,213333911,SNP,G,A,ERBB4_Intron
+2,213356893,SNP,G,C,ERBB4_Intron
+21,36307314,SNP,C,G,RUNX1_Intron
+21,36314289,SNP,C,T,RUNX1_Intron
+21,36335931,SNP,C,T,RUNX1_Intron
+21,36336060,SNP,C,G,RUNX1_Intron
+21,36816133,SNP,G,C,RUNX1_Intron
+22,29108287,SNP,G,C,CHEK2_Intron
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+3,138497180,SNP,G,T,PIK3CB_Intron
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+3,178936091,SNP,G,A,PIK3CA_Coding
+3,185062995,SNP,C,T,MAP3K13_Intron
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+4,143033578,SNP,G,C,INPP4B_Intron
+4,143050269,SNP,G,C,INPP4B_Intron
+4,143164912,SNP,G,C,INPP4B_Intron
+4,143172161,SNP,G,A,INPP4B_Intron
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+4,143306454,SNP,C,T,INPP4B_Intron
+4,143337945,SNP,G,C,INPP4B_Intron
+4,143349168,SNP,G,A,INPP4B_Intron
+4,143384829,SNP,G,C,INPP4B_Intron
+4,143404073,SNP,G,C,INPP4B_Intron
+4,143426002,SNP,G,C,INPP4B_Intron
+4,143458066,SNP,C,T,INPP4B_Intron
+4,143486415,SNP,G,A,INPP4B_Intron
+4,143510086,SNP,G,T,INPP4B_Intron
+4,143524838,SNP,G,A,INPP4B_Intron
+4,143525444,SNP,G,A,INPP4B_Intron
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+4,143714658,SNP,C,G,INPP4B_Intron
+5,56153396,SNP,C,G,MAP3K1_Intron
+5,56181792,SNP,G,A,MAP3K1_Coding
+5,56182278,SNP,G,A,MAP3K1_Intron
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+6,152029336,SNP,C,G,ESR1_Intron
+6,152063056,SNP,C,A,ESR1_Intron
+6,152089210,SNP,G,A,ESR1_Intron
+6,152119223,SNP,G,C,ESR1_Intron
+6,152150731,SNP,C,G,ESR1_Intron
+6,152173318,SNP,G,C,ESR1_Intron
+6,152173749,SNP,A,T,ESR1_Intron
+6,152221345,SNP,C,G,ESR1_Intron
+6,152235745,SNP,C,T,ESR1_Intron
+6,152287550,SNP,C,T,ESR1_Intron
+6,152324531,SNP,G,A,ESR1_Intron
+6,152331210,SNP,G,A,ESR1_Intron
+6,152331372,SNP,G,A,ESR1_Intron
+6,152335006,SNP,C,G,ESR1_Intron
+6,152337838,SNP,C,T,ESR1_Intron
+6,152381721,SNP,C,T,ESR1_Intron
+6,152381781,SNP,C,T,ESR1_Intron
+6,152430195,SNP,G,A,ESR1_Intron
+6,157108603,SNP,G,C,ARID1B_Intron
+6,157465353,SNP,G,C,ARID1B_Intron
+6,168307003,SNP,C,A,MLLT4_Intron
+X,38148448,SNP,G,C,RPGR_Intron
+X,38166014,SNP,G,A,RPGR_Intron
+X,38169155,SNP,C,G,RPGR_Intron
+X,100619354,SNP,G,A,BTK_Intron
+X,123159920,SNP,C,T,STAG2_Intron
+X,123180832,SNP,G,A,STAG2_Intron
+X,123203033,SNP,G,A,STAG2_Intron
+X,123261271,SNP,C,G,STAG2_Intron
+X,123331546,SNP,G,A,STAG2_Intron
+X,123337590,SNP,G,A,STAG2_Intron
+X,123375044,SNP,G,A,STAG2_Intron
+X,123387331,SNP,G,A,STAG2_Intron
+X,123421651,SNP,C,T,STAG2_Intron
+X,123453739,SNP,C,T,STAG2_Intron
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+10,61998243,SNP,C,G,ANK3_Intron
+2,212427589,SNP,C,T,ERBB4_Intron
+2,212691898,SNP,G,T,ERBB4_Intron
+21,36818734,SNP,C,G,RUNX1_Intron
+21,36819360,SNP,C,T,RUNX1_Intron
+6,152401860,SNP,C,G,ESR1_Intron
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+4,143479013,SNP,T,C,INPP4B_Intron
+X,100616806,SNP,C,G,BTK_Intron
+X,123373107,SNP,G,T,STAG2_Intron
+X,123373164,SNP,G,T,STAG2_Intron
+X,123403235,SNP,A,G,STAG2_Intron
+15,28538510,SNP,G,A,HERC2_Intron
+16,68834374,SNP,A,G,CDH1_Intron
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+4,143364476,SNP,G,A,INPP4B_Intron
+4,143616759,SNP,T,C,INPP4B_Intron
+6,152207901,SNP,C,G,ESR1_Intron
+6,152407197,SNP,C,T,ESR1_Intron
+6,152407219,SNP,T,G,ESR1_Intron
+6,168228578,SNP,G,A,MLLT4_Intron
+X,123462672,SNP,G,A,STAG2_Intron
+5,56178529,DEL,AAAAGATGATGTGA,A,MAP3K1_Coding
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+6,152118005,SNP,C,A,ESR1_Intron
+X,123358848,SNP,T,C,STAG2_Intron
+10,89694790,DEL,GGTAAAAAATTTTTT,G,PTEN_Intron
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+1,235426816,SNP,C,G,ARID4B_Intron
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+15,28362755,SNP,A,G,HERC2_Intron
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+17,7577580,SNP,T,C,TP53_Coding
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+21,36167664,SNP,C,T,RUNX1_Intron
+21,36417107,SNP,C,T,RUNX1_Intron
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+X,123359737,SNP,G,T,STAG2_Intron
+10,62432950,INS,G,GT,ANK3_Intron
+2,212447722,INS,A,AT,ERBB4_Intron
+X,123420945,INS,A,AT,STAG2_Intron
+12,64465006,SNP,A,G,SRGAP1_Intron
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+6,152410240,DEL,AAAAC,A,ESR1_Intron
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+17,7577538,SNP,C,T,TP53_Coding
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+X,123218278,SNP,C,T,STAG2_Intron
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+5,56177763,DEL,AA,A,MAP3K1_Coding
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+1,120469623,SNP,C,A,NOTCH2_Intron
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+4,142953478,SNP,C,G,INPP4B_Intron
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+6,157280052,SNP,C,A,ARID1B_Intron
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+6,157522509,SNP,G,A,ARID1B_Coding
+X,123453833,SNP,T,C,STAG2_Intron
+2,213127094,INS,C,CAT,ERBB4_Intron
+10,61898942,SNP,A,G,ANK3_Intron
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+21,36335335,SNP,G,T,RUNX1_Intron
+6,157528267,SNP,G,C,ARID1B_Coding
+X,38174452,SNP,G,C,RPGR_Intron
+1,235340750,INS,G,GT,ARID4B_Intron
+17,7576863,DEL,AA,A,TP53_Coding
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+12,64322322,SNP,T,C,SRGAP1_Intron
+17,7577570,SNP,C,A,TP53_Coding
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+2,212449219,SNP,C,A,ERBB4_Intron
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+X,123421374,SNP,C,G,STAG2_Intron
+19,50701985,DEL,AAACTATCTA,A,MYH14_Intron
+10,62077189,SNP,G,A,ANK3_Intron
+15,28385819,SNP,C,A,HERC2_Intron
+17,7577579,SNP,G,T,TP53_Coding
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+21,36266217,SNP,G,A,RUNX1_Intron
+3,185136818,SNP,T,G,MAP3K13_Intron
+6,168364223,SNP,G,A,MLLT4_Intron
+17,59897744,DEL,AAAATTTGAACTACTTA,A,BRIP1_Intron
+1,120470833,SNP,C,T,NOTCH2_Intron
+1,120502391,SNP,G,A,NOTCH2_Intron
+1,120502413,SNP,A,G,NOTCH2_Intron
+1,120523517,SNP,C,T,NOTCH2_Intron
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+16,67084713,SNP,A,T,CBFB_Intron
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+21,36406801,SNP,T,G,RUNX1_Intron
+3,138427127,SNP,G,T,PIK3CB_Intron
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+6,152210699,SNP,G,T,ESR1_Intron
+6,152252739,SNP,C,A,ESR1_Intron
+X,123316717,SNP,G,A,STAG2_Intron
+X,123412758,SNP,G,T,STAG2_Intron
+2,212806776,INS,A,AT,ERBB4_Intron
+6,157274225,DEL,TTTA,T,ARID1B_Intron
+10,62348488,SNP,G,A,ANK3_Intron
+10,89717609,SNP,G,A,PTEN_Intron
+15,28444569,SNP,G,A,HERC2_Intron
+17,7577094,SNP,G,A,TP53_Coding
+2,212434116,SNP,C,A,ERBB4_Intron
+4,143360934,SNP,G,T,INPP4B_Intron
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+X,38165891,SNP,C,A,RPGR_Intron
+X,123269459,SNP,G,A,STAG2_Intron
+X,123448503,SNP,C,T,STAG2_Intron
+3,178879310,DEL,CCC,C,PIK3CA_Intron
+6,157524574,DEL,CC,C,ARID1B_Intron
+1,235353685,SNP,C,A,ARID4B_Intron
+17,7578271,SNP,T,C,TP53_Coding
+17,16007251,SNP,G,A,NCOR1_Intron
+17,59791452,SNP,G,A,BRIP1_Intron
+2,212829544,SNP,C,A,ERBB4_Intron
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+3,138462960,SNP,G,C,PIK3CB_Intron
+3,185187951,SNP,T,G,MAP3K13_Intron
+6,152173799,SNP,A,T,ESR1_Intron
+6,152369072,SNP,C,A,ESR1_Intron
+10,70503342,DEL,CCAGGCTAGAGTG,C,CCAR1_Intron
+3,138502003,DEL,AATGAACATATCGACAGCTCTCCTCTTCCTCTGTAATCTTCTGATG,A,PIK3CB_Intron
+12,64486784,SNP,C,A,SRGAP1_Intron
+17,12014296,SNP,A,T,MAP2K4_Intron
+2,212255156,SNP,C,T,ERBB4_Intron
+2,212644972,SNP,T,A,ERBB4_Intron
+2,212697172,SNP,T,C,ERBB4_Intron
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+3,185075946,SNP,G,A,MAP3K13_Intron
+4,143021371,SNP,G,T,INPP4B_Intron
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+4,143321767,SNP,G,A,INPP4B_Intron
+2,213349367,DEL,TT,T,ERBB4_Intron
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+3,178923557,SNP,T,A,PIK3CA_Intron
+4,143294412,SNP,G,T,INPP4B_Intron
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+6,152069672,SNP,C,A,ESR1_Intron
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+21,36255493,DEL,GG,G,RUNX1_Intron
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+21,36819262,SNP,A,T,RUNX1_Intron
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+6,152416595,SNP,T,A,ESR1_Intron
+6,157322477,SNP,G,A,ARID1B_Intron
+6,157525033,SNP,T,G,ARID1B_Coding
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+3,178927980,DEL,TTGTCCA,T,PIK3CA_Coding
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+X,123182049,SNP,T,G,STAG2_Intron
+X,123305078,SNP,C,T,STAG2_Intron
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+5,56155715,DEL,AAA,A,MAP3K1_Coding
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+10,89709967,SNP,A,C,PTEN_Intron
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+3,178952085,SNP,A,G,PIK3CA_Coding
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+X,123349692,SNP,T,G,STAG2_Intron
+3,185005669,INS,C,CA,MAP3K13_Intron
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+1,120488400,SNP,C,T,NOTCH2_Intron
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+2,212859140,SNP,G,A,ERBB4_Intron
+3,178936091,SNP,G,A,PIK3CA_Coding
+6,157158215,SNP,G,A,ARID1B_Intron
+X,123146558,SNP,A,T,STAG2_Intron
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+22,29122502,DEL,AAATATAACATATATTATATATTTAT,A,CHEK2_Intron
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+15,28471115,SNP,G,C,HERC2_Intron
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+2,212894883,SNP,G,A,ERBB4_Intron
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+2,213136597,SNP,C,A,ERBB4_Intron
+21,36251354,SNP,G,A,RUNX1_Intron
+21,36297657,SNP,G,C,RUNX1_Intron
+3,138395970,SNP,C,A,PIK3CB_Intron
+3,185044612,SNP,A,G,MAP3K13_Intron
+4,143002104,SNP,G,A,INPP4B_Intron
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+6,157405637,SNP,C,A,ARID1B_Intron
+15,28415396,DEL,AATAAGGAGGAGGAATGAGTCT,A,HERC2_Intron
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+21,36814352,SNP,G,A,RUNX1_Intron
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+X,123194538,SNP,C,T,STAG2_Intron
+10,8115983,DEL,TT,T,GATA3_Coding
+1,235337589,SNP,C,T,ARID4B_Intron
+10,8102455,SNP,G,A,GATA3_Intron
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+12,64454263,SNP,C,T,SRGAP1_Intron
+16,67078727,SNP,C,G,CBFB_Intron
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+17,16000214,SNP,G,A,NCOR1_Intron
+17,41228448,SNP,G,T,BRCA1_Intron
+17,59820675,SNP,A,T,BRIP1_Intron
+17,59856109,SNP,G,C,BRIP1_Intron
+17,59889312,SNP,C,G,BRIP1_Intron
+19,50700864,SNP,A,G,MYH14_Intron
+19,50761773,SNP,G,C,MYH14_Intron
+2,212316064,SNP,G,T,ERBB4_Intron
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+2,212609682,SNP,C,T,ERBB4_Intron
+2,212723703,SNP,C,T,ERBB4_Intron
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+2,212913670,SNP,T,A,ERBB4_Intron
+2,213141859,SNP,G,A,ERBB4_Intron
+2,213347224,SNP,G,C,ERBB4_Intron
+2,213396065,SNP,G,C,ERBB4_Intron
+21,36356062,DNP,TG,GT,RUNX1_Intron
+21,36389690,SNP,G,A,RUNX1_Intron
+3,185168235,SNP,C,G,MAP3K13_Intron
+4,142963094,SNP,C,G,INPP4B_Intron
+4,143007050,SNP,G,A,INPP4B_Intron
+4,143052731,SNP,G,C,INPP4B_Intron
+4,143118968,SNP,G,C,INPP4B_Intron
+4,143171779,SNP,G,T,INPP4B_Intron
+4,143171854,SNP,G,A,INPP4B_Intron
+4,143530957,SNP,G,A,INPP4B_Intron
+4,143603729,SNP,C,T,INPP4B_Intron
+4,143690769,SNP,T,A,INPP4B_Intron
+6,152189036,SNP,C,T,ESR1_Intron
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+6,157141516,SNP,A,T,ARID1B_Intron
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+X,38176287,SNP,G,A,RPGR_Intron
+X,123302072,SNP,C,A,STAG2_Intron
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+X,123437483,SNP,C,T,STAG2_Intron
+X,123437651,SNP,C,T,STAG2_Intron
+17,12021387,DEL,TTTATAGAAATTTAAGAA,T,MAP2K4_Intron
+17,12021388,DEL,TTATAGAAATTTAAGAAA,T,MAP2K4_Intron
+17,59797344,DEL,CCATGCCTGGCCAATTTTTTT,C,BRIP1_Intron
+4,143549466,DEL,AA,A,INPP4B_Intron
+6,152400431,DEL,GGCAGCAATATTTGTTGTTCT,G,ESR1_Intron
+1,120465555,SNP,T,C,NOTCH2_Intron
+1,235368118,SNP,T,G,ARID4B_Intron
+10,89683071,SNP,C,G,PTEN_Intron
+17,7578266,SNP,T,A,TP53_Coding
+17,59930313,SNP,C,G,BRIP1_Intron
+19,50706794,SNP,C,A,MYH14_Intron
+2,212319824,SNP,C,G,ERBB4_Intron
+2,212407094,SNP,G,C,ERBB4_Intron
+2,212491631,SNP,C,T,ERBB4_Intron
+2,212674435,SNP,G,C,ERBB4_Intron
+2,213124734,SNP,C,T,ERBB4_Intron
+21,36249734,SNP,A,G,RUNX1_Intron
+21,36383078,SNP,G,A,RUNX1_Intron
+3,138459828,SNP,A,G,PIK3CB_Intron
+3,178912025,SNP,T,A,PIK3CA_Intron
+3,178913046,SNP,G,T,PIK3CA_Intron
+3,185081974,SNP,G,C,MAP3K13_Intron
+3,185105760,SNP,G,A,MAP3K13_Intron
+3,185147520,SNP,C,T,MAP3K13_Intron
+4,143073796,SNP,G,C,INPP4B_Intron
+4,143218214,SNP,C,T,INPP4B_Intron
+4,143255612,SNP,G,C,INPP4B_Intron
+4,143502060,SNP,C,G,INPP4B_Intron
+6,152025227,SNP,G,C,ESR1_Intron
+6,152182190,SNP,A,G,ESR1_Intron
+6,157329335,SNP,C,T,ARID1B_Intron
+10,89692823,DEL,CC,C,PTEN_Coding
+16,68791582,SNP,A,G,CDH1_Intron
+17,59795190,SNP,C,G,BRIP1_Intron
+2,212676187,SNP,C,T,ERBB4_Intron
+2,212935981,SNP,C,T,ERBB4_Intron
+2,213110152,SNP,C,A,ERBB4_Intron
+2,213149521,SNP,G,C,ERBB4_Intron
+3,138547286,SNP,C,A,PIK3CB_Intron
+3,178914507,SNP,G,A,PIK3CA_Intron
+3,185076564,SNP,C,G,MAP3K13_Intron
+4,143482834,SNP,A,G,INPP4B_Intron
+6,157426393,SNP,G,C,ARID1B_Intron
+6,157465740,SNP,G,A,ARID1B_Intron
+6,157527537,SNP,G,C,ARID1B_Coding
+X,123179959,SNP,C,G,STAG2_Intron
+X,123197400,SNP,C,G,STAG2_Intron
+4,143753015,INS,A,AT,INPP4B_Intron
+12,64421637,SNP,G,A,SRGAP1_Intron
+19,50694180,SNP,C,T,MYH14_Intron
+3,178936091,SNP,G,A,PIK3CA_Coding
+6,152414209,SNP,C,G,ESR1_Intron
+6,152415230,SNP,G,C,ESR1_Intron
+X,123317224,SNP,A,T,STAG2_Intron
+X,123329356,SNP,C,A,STAG2_Intron
+6,157147768,DEL,TTC,T,ARID1B_Intron
+X,123103097,INS,T,TG,STAG2_Intron
+1,120561334,SNP,A,G,NOTCH2_Intron
+19,50778979,SNP,A,T,MYH14_Intron
+2,213171030,SNP,G,A,ERBB4_Intron
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+1,120517302,SNP,C,T,NOTCH2_Intron
+1,120528269,SNP,C,T,NOTCH2_Intron
+1,235336764,SNP,C,T,ARID4B_Intron
+1,235371314,SNP,C,G,ARID4B_Intron
+1,235444530,SNP,C,T,ARID4B_Intron
+1,235454211,SNP,G,A,ARID4B_Intron
+1,235454667,SNP,G,A,ARID4B_Intron
+1,235485049,SNP,C,T,ARID4B_Intron
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+10,61796260,SNP,C,G,ANK3_Intron
+10,61821839,SNP,C,T,ANK3_Intron
+10,61837982,SNP,G,A,ANK3_Intron
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+10,62054545,SNP,C,T,ANK3_Intron
+10,62159268,SNP,G,C,ANK3_Intron
+10,62169794,SNP,C,T,ANK3_Intron
+10,62484484,SNP,G,C,ANK3_Intron
+10,70487054,SNP,G,A,CCAR1_Intron
+10,70487876,SNP,G,C,CCAR1_Intron
+10,70490344,SNP,C,T,CCAR1_Intron
+10,70491411,SNP,G,A,CCAR1_Intron
+10,70491415,SNP,C,A,CCAR1_Intron
+10,70491605,SNP,C,T,CCAR1_Intron
+10,70492523,SNP,G,C,CCAR1_Intron
+10,70492833,SNP,C,T,CCAR1_Intron
+10,70493511,SNP,C,T,CCAR1_Intron
+10,70495838,SNP,G,C,CCAR1_Intron
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+10,70508845,SNP,G,A,CCAR1_Intron
+10,70511280,SNP,G,A,CCAR1_Intron
+10,70512426,SNP,G,A,CCAR1_Intron
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+12,64242281,SNP,C,T,SRGAP1_Intron
+12,64280674,SNP,G,A,SRGAP1_Intron
+12,64356498,SNP,G,A,SRGAP1_Intron
+12,64528403,SNP,G,A,SRGAP1_Intron
+15,28409371,SNP,A,G,HERC2_Intron
+15,28428070,SNP,C,T,HERC2_Intron
+15,28513091,SNP,C,T,HERC2_Intron
+15,28541973,SNP,G,A,HERC2_Intron
+16,67131356,SNP,G,A,CBFB_Intron
+16,67131978,SNP,C,G,CBFB_Intron
+17,11964331,SNP,C,T,MAP2K4_Intron
+17,12009047,SNP,G,A,MAP2K4_Intron
+17,12011860,SNP,C,T,MAP2K4_Intron
+17,16049596,SNP,G,C,NCOR1_Intron
+17,16094843,SNP,G,C,NCOR1_Intron
+17,41248129,SNP,C,G,BRCA1_Intron
+19,50697383,SNP,C,A,MYH14_Intron
+19,50716240,SNP,C,T,MYH14_Intron
+19,50789023,SNP,C,G,MYH14_Intron
+2,212307437,SNP,G,C,ERBB4_Intron
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+2,212358631,SNP,G,A,ERBB4_Intron
+2,212377883,SNP,G,C,ERBB4_Intron
+2,212395167,SNP,C,G,ERBB4_Intron
+2,212467048,SNP,C,T,ERBB4_Intron
+2,212665096,SNP,G,A,ERBB4_Intron
+2,212766165,SNP,C,T,ERBB4_Intron
+2,212770581,SNP,G,A,ERBB4_Intron
+2,212799609,SNP,T,G,ERBB4_Intron
+2,212812981,SNP,G,A,ERBB4_Intron
+2,212863024,SNP,G,A,ERBB4_Intron
+2,212879617,SNP,C,G,ERBB4_Intron
+2,212959704,SNP,C,T,ERBB4_Intron
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+21,36168024,SNP,C,T,RUNX1_Intron
+21,36221962,SNP,G,T,RUNX1_Intron
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+4,143039078,SNP,G,A,INPP4B_Intron
+4,143103730,SNP,C,G,INPP4B_Intron
+4,143231062,SNP,G,A,INPP4B_Intron
+4,143234424,SNP,G,A,INPP4B_Intron
+4,143252695,SNP,G,A,INPP4B_Intron
+4,143326503,SNP,G,A,INPP4B_Intron
+4,143381472,SNP,G,A,INPP4B_Intron
+4,143385561,SNP,G,T,INPP4B_Intron
+4,143428897,SNP,G,A,INPP4B_Intron
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+X,123441557,SNP,C,A,STAG2_Intron
+X,123475690,SNP,C,T,STAG2_Intron
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+17,59797149,SNP,G,A,BRIP1_Intron
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+6,152322607,DEL,TTA,T,ESR1_Intron
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+6,152210811,SNP,T,A,ESR1_Intron
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+3,178928071,DEL,AATGGATTAGAAGATT,A,PIK3CA_Coding
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+5,56175173,DEL,CCT,C,MAP3K1_Intron
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+2,212627088,SNP,G,A,ERBB4_Intron
+10,8111484,INS,A,ACAACCACACT,GATA3_Coding
+2,212483042,DEL,AA,A,ERBB4_Intron
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+17,7577581,SNP,A,G,TP53_Coding
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+17,41259027,SNP,C,G,BRCA1_Intron
+19,50794597,SNP,C,G,MYH14_Intron
+2,212664845,SNP,G,A,ERBB4_Intron
+22,29131347,SNP,T,C,CHEK2_Intron
+3,178888625,SNP,C,G,PIK3CA_Intron
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+3,185134357,SNP,C,G,MAP3K13_Intron
+3,185181469,SNP,C,T,MAP3K13_Intron
+4,142995161,SNP,A,G,INPP4B_Intron
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+6,152124637,SNP,C,T,ESR1_Intron
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+6,152209383,SNP,G,C,ESR1_Intron
+X,100618160,SNP,G,T,BTK_Intron
+10,62026898,SNP,C,G,ANK3_Intron
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+12,64309716,SNP,G,A,SRGAP1_Intron
+17,7578394,SNP,T,C,TP53_Coding
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+2,212348284,SNP,G,C,ERBB4_Intron
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+2,212444631,SNP,T,G,ERBB4_Intron
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+21,36344506,SNP,C,A,RUNX1_Intron
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+4,143447831,SNP,C,T,INPP4B_Intron
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+6,157319654,SNP,G,T,ARID1B_Intron
+6,168339764,SNP,A,G,MLLT4_Intron
+2,212732210,DEL,AA,A,ERBB4_Intron
+2,213058127,INS,C,CT,ERBB4_Intron
+21,36374795,SNP,G,T,RUNX1_Intron
+3,138550363,SNP,G,C,PIK3CB_Intron
+6,157140848,SNP,A,G,ARID1B_Intron
+6,157261723,SNP,G,C,ARID1B_Intron
+X,123186016,SNP,G,A,STAG2_Intron
+X,123206281,SNP,T,C,STAG2_Intron
+X,123206305,SNP,T,C,STAG2_Intron
+4,143235518,DEL,CCCTC,C,INPP4B_Intron
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+19,50729466,SNP,T,C,MYH14_Intron
+21,36312204,SNP,G,A,RUNX1_Intron
+6,152227001,SNP,A,G,ESR1_Intron
+X,100619192,SNP,T,G,BTK_Intron
+17,7577573,DEL,GGTA,G,TP53_Coding
+3,138552211,DEL,AA,A,PIK3CB_Intron
+10,62406445,SNP,G,A,ANK3_Intron
+12,64502990,SNP,G,C,SRGAP1_Intron
+15,28561985,SNP,C,T,HERC2_Intron
+17,11954902,SNP,A,G,MAP2K4_Intron
+2,212624078,SNP,G,C,ERBB4_Intron
+5,56156930,SNP,C,A,MAP3K1_Intron
+6,152323945,SNP,T,G,ESR1_Intron
+X,123360719,SNP,A,C,STAG2_Intron
+2,212633264,DEL,TTAGA,T,ERBB4_Intron
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+16,67098516,SNP,A,C,CBFB_Intron
+17,7574018,SNP,G,A,TP53_Coding
+6,152139039,SNP,T,C,ESR1_Intron
+X,123162857,SNP,A,T,STAG2_Intron
+X,123397528,SNP,C,G,STAG2_Intron
+17,12036847,SNP,A,T,MAP2K4_Intron
+2,212567398,SNP,A,C,ERBB4_Intron
+4,142974553,SNP,C,T,INPP4B_Intron
+4,143112386,SNP,G,A,INPP4B_Intron
+10,8111433,DEL,CCA,C,GATA3_Intron
+6,157389668,DEL,AAA,A,ARID1B_Intron
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+15,28543373,SNP,C,G,HERC2_Intron
+17,59814458,SNP,A,C,BRIP1_Intron
+3,185144156,SNP,C,A,MAP3K13_Intron
+4,143072005,SNP,T,C,INPP4B_Intron
+4,143621825,SNP,A,T,INPP4B_Intron
+X,123390912,SNP,C,A,STAG2_Intron
+6,152184037,DEL,GGGTGTC,G,ESR1_Intron
+10,8105345,SNP,G,C,GATA3_Intron
+3,178952085,SNP,A,T,PIK3CA_Coding
+4,143566091,SNP,C,A,INPP4B_Intron
+6,157335051,SNP,C,A,ARID1B_Intron
+6,157334896,DEL,TTACA,T,ARID1B_Intron
+1,120479474,SNP,C,A,NOTCH2_Intron
+1,235376689,SNP,A,C,ARID4B_Intron
+1,235382769,SNP,A,G,ARID4B_Intron
+10,61931338,SNP,T,A,ANK3_Intron
+10,62202157,SNP,C,G,ANK3_Intron
+12,64273955,SNP,C,T,SRGAP1_Intron
+12,64308883,SNP,A,G,SRGAP1_Intron
+12,64483465,SNP,G,C,SRGAP1_Intron
+15,28413946,SNP,A,T,HERC2_Intron
+15,28431931,SNP,T,C,HERC2_Intron
+16,67077121,SNP,C,A,CBFB_Intron
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+17,15975678,SNP,C,A,NCOR1_Intron
+17,59767219,SNP,A,T,BRIP1_Intron
+17,59801640,SNP,C,A,BRIP1_Intron
+17,59820145,SNP,G,C,BRIP1_Intron
+2,212254893,SNP,C,A,ERBB4_Intron
+2,213116776,SNP,A,T,ERBB4_Intron
+2,213187304,SNP,G,C,ERBB4_Intron
+22,29117087,SNP,G,C,CHEK2_Intron
+3,138503579,SNP,C,G,PIK3CB_Intron
+3,185052401,SNP,T,A,MAP3K13_Intron
+3,185052515,SNP,G,C,MAP3K13_Intron
+4,143139401,SNP,C,A,INPP4B_Intron
+4,143160641,SNP,G,C,INPP4B_Intron
+4,143300926,SNP,T,G,INPP4B_Intron
+4,143338305,SNP,T,C,INPP4B_Intron
+6,152242542,SNP,A,G,ESR1_Intron
+X,38185031,SNP,C,T,RPGR_Intron
+X,123476227,SNP,C,T,STAG2_Intron
+10,8115928,INS,C,CA,GATA3_Coding
+16,68836199,DEL,AATTACGTC,A,CDH1_Intron
+17,59918440,DEL,AAAGACTTAAACAT,A,BRIP1_Intron
+17,59918556,DEL,AA,A,BRIP1_Intron
+4,143442400,DEL,TTGTTTCATTAAGAC,T,INPP4B_Intron
+4,143445615,DEL,GG,G,INPP4B_Intron
+10,61794947,SNP,A,G,ANK3_Intron
+17,7578442,SNP,T,C,TP53_Coding
+17,11992161,SNP,G,C,MAP2K4_Intron
+2,212979983,SNP,A,G,ERBB4_Intron
+22,29084533,SNP,T,G,CHEK2_Intron
+3,178936082,SNP,G,A,PIK3CA_Coding
+3,185150233,SNP,C,T,MAP3K13_Intron
+6,152167104,SNP,G,A,ESR1_Intron
+6,152364638,SNP,C,A,ESR1_Intron
+6,152376876,SNP,T,G,ESR1_Intron
+6,157350626,SNP,G,A,ARID1B_Intron
+X,123336005,SNP,C,T,STAG2_Intron
+X,123379409,SNP,T,C,STAG2_Intron
+X,123408541,SNP,T,C,STAG2_Intron
+X,123410548,SNP,A,T,STAG2_Intron
+X,123449304,SNP,C,T,STAG2_Intron
+X,123120695,DEL,TT,T,STAG2_Intron
+17,41203723,SNP,G,A,BRCA1_Intron
+17,59834207,SNP,A,G,BRIP1_Intron
+2,212916931,SNP,G,A,ERBB4_Intron
+4,143074543,SNP,A,G,INPP4B_Intron
+4,143693080,SNP,C,T,INPP4B_Intron
+17,7578416,SNP,C,A,TP53_Coding
+21,36227123,SNP,T,A,RUNX1_Intron
+3,178916929,DEL,GGGCAACCGT,G,PIK3CA_Coding
+5,56155721,DEL,AAA,A,MAP3K1_Coding
+10,62006393,SNP,C,T,ANK3_Intron
+10,89692905,SNP,G,A,PTEN_Coding
+16,68831724,SNP,A,G,CDH1_Intron
+2,212447287,SNP,G,C,ERBB4_Intron
+2,212827294,SNP,C,T,ERBB4_Intron
+2,212831690,SNP,T,C,ERBB4_Intron
+21,36334893,SNP,C,T,RUNX1_Intron
+3,178916933,SNP,A,T,PIK3CA_Coding
+3,178952085,SNP,A,G,PIK3CA_Coding
+3,185101337,SNP,G,A,MAP3K13_Intron
+5,56161213,SNP,T,A,MAP3K1_Coding
+10,89685294,DEL,CC,C,PTEN_Coding
+10,8110154,SNP,A,G,GATA3_Intron
+10,62226929,SNP,G,T,ANK3_Intron
+15,28396738,SNP,C,T,HERC2_Intron
+17,7578406,SNP,C,T,TP53_Coding
+17,41229125,SNP,T,C,BRCA1_Intron
+2,212468761,SNP,C,T,ERBB4_Intron
+2,212842181,SNP,C,G,ERBB4_Intron
+21,36403616,SNP,G,C,RUNX1_Intron
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drivers/Kidney-RCC_drivers.pkl

@@ -0,0 +1,3 @@
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drivers/Liver-HCC_drivers.pkl

@@ -0,0 +1,3 @@
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drivers/Lymph-MCLL_driver_mutations.csv

@@ -0,0 +1,137 @@
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+10,123257138,SNP,A,G,FGFR2_Intron
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+7,80144204,SNP,T,G,CD36_Intron
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+10,123256580,SNP,G,C,FGFR2_Intron
+7,80223575,INS,C,CT,CD36_Intron
+7,80048595,SNP,G,A,CD36_Intron
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+X,123299851,SNP,A,G,STAG2_Intron
+16,81850626,SNP,C,T,PLCG2_Intron
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+X,123181888,SNP,C,A,STAG2_Intron
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+7,79774341,SNP,T,A,GNAI1_Intron
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+X,123426695,SNP,T,C,STAG2_Intron
+X,123466776,SNP,G,T,STAG2_Intron
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+5,14326468,SNP,C,T,TRIO_Intron
+X,123424215,SNP,A,T,STAG2_Intron
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+10,123299992,SNP,G,A,FGFR2_Intron
+17,7577568,SNP,C,A,TP53_Coding
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+X,123178143,SNP,T,C,STAG2_Intron
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+10,123332224,SNP,T,A,FGFR2_Intron
+2,198266834,SNP,T,C,SF3B1_Coding
+5,14238550,SNP,A,G,TRIO_Intron
+7,80008389,SNP,T,A,CD36_Intron
+7,80202648,SNP,G,T,CD36_Intron
+3,187462615,SNP,T,C,BCL6_Intron
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+3,187462979,SNP,T,G,BCL6_Intron
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+7,79803727,SNP,A,T,GNAI1_Intron
+10,123265354,SNP,T,A,FGFR2_Intron
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+7,80007702,SNP,T,C,CD36_Intron

drivers/Lymph-MCLL_drivers.pkl

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drivers/Lymph-UCLL1_drivers.pkl

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drivers/Lymph-UCLL2_drivers.pkl

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drivers/Lymph-UCLL3_drivers.pkl

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drivers/Lymph-UCLL_driver_mutations.csv

@@ -0,0 +1,132 @@
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+11,108203538,DEL,GGACCTCAGATGGTCAGAAGTGT,G,ATM_Coding
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+X,123156668,SNP,T,C,STAG2_Intron
+X,123323766,SNP,C,A,STAG2_Intron
+10,123303896,SNP,T,C,FGFR2_Intron
+11,108166578,SNP,T,C,ATM_Intron
+6,44232739,DEL,GGTAA,G,NFKBIE_Coding
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+11,108141874,SNP,G,A,ATM_Intron
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+11,108218047,SNP,A,T,ATM_Coding
+11,108160497,INS,A,ATT,ATM_Coding
+5,14218653,SNP,A,G,TRIO_Intron
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+16,81859735,SNP,T,A,PLCG2_Intron
+16,81947087,SNP,C,A,PLCG2_Intron
+5,14263742,SNP,C,T,TRIO_Intron
+6,394946,SNP,C,G,IRF4_Coding
+7,79841287,SNP,C,A,GNAI1_Intron
+7,80218505,SNP,T,A,CD36_Intron
+7,140453145,SNP,A,T,BRAF_Coding
+2,198266834,SNP,T,C,SF3B1_Coding
+5,14341041,SNP,A,T,TRIO_Intron
+7,79795579,SNP,T,A,GNAI1_Intron
+11,102207687,SNP,T,C,BIRC3_Coding
+10,123278483,SNP,G,A,FGFR2_Intron
+11,108160674,SNP,T,A,ATM_Intron
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+2,198267489,SNP,T,C,SF3B1_Coding
+20,31021553,SNP,G,T,ASXL1_Coding
+7,80116847,SNP,T,C,CD36_Intron
+7,80127820,SNP,A,T,CD36_Intron
+11,108154895,SNP,A,G,ATM_Intron
+5,14482875,SNP,G,A,TRIO_Coding
+7,80011105,SNP,T,C,CD36_Intron
+6,87967587,SNP,C,T,ZNF292_Coding
+11,108119661,DEL,TT,T,ATM_Intron
+X,123324227,SNP,C,T,STAG2_Intron
+16,81918435,SNP,C,T,PLCG2_Intron
+17,7578403,SNP,C,T,TP53_Coding
+2,61719472,SNP,C,T,XPO1_Coding
+2,198267359,SNP,C,A,SF3B1_Coding
+16,81899232,SNP,C,G,PLCG2_Intron
+17,7578190,SNP,T,C,TP53_Coding
+7,80116692,SNP,G,T,CD36_Intron
+X,123141307,SNP,A,G,STAG2_Intron
+11,108188238,SNP,A,G,ATM_Coding
+7,80277690,SNP,G,A,CD36_Intron
+17,7578190,SNP,T,C,TP53_Coding
+X,123264464,SNP,G,A,STAG2_Intron
+X,123303761,SNP,T,C,STAG2_Intron
+10,123350636,SNP,T,A,FGFR2_Intron
+7,80073739,SNP,A,C,CD36_Intron
+7,80210282,SNP,A,T,CD36_Intron
+11,108121475,DEL,CCTAA,C,ATM_Coding
+11,108203577,SNP,C,T,ATM_Coding
+7,80090758,SNP,G,A,CD36_Intron
+20,31022573,DEL,GGT,G,ASXL1_Coding
+7,79836116,SNP,T,C,GNAI1_Intron
+7,79836726,SNP,C,A,GNAI1_Intron
+7,79792658,SNP,G,C,GNAI1_Intron
+6,87966633,DEL,CC,C,ZNF292_Coding
+11,108188174,SNP,G,A,ATM_Coding
+7,79786499,SNP,A,G,GNAI1_Intron
+7,80252549,SNP,C,T,CD36_Intron
+11,102207657,DEL,CC,C,BIRC3_Coding
+11,102207675,INS,G,GA,BIRC3_Coding
+16,81851236,DEL,TTTATT,T,PLCG2_Intron
+11,108186739,SNP,C,G,ATM_Intron
+2,198267481,SNP,T,A,SF3B1_Coding
+5,14181011,SNP,T,C,TRIO_Intron
+7,79818546,SNP,C,T,GNAI1_Intron
+7,80025955,SNP,T,C,CD36_Intron
+7,80054320,SNP,C,A,CD36_Intron
+7,80093628,SNP,A,T,CD36_Intron
+7,124499045,SNP,T,C,POT1_Coding
+X,123126453,SNP,A,G,STAG2_Intron
+X,123296898,SNP,A,G,STAG2_Intron
+11,62571415,SNP,T,A,NXF1_Coding
+5,14258664,SNP,A,G,TRIO_Intron
+6,87964601,SNP,T,A,ZNF292_Coding
+6,44232739,DEL,GGTAA,G,NFKBIE_Coding
+7,79812792,SNP,A,G,GNAI1_Intron
+7,80006426,SNP,G,A,CD36_Intron
+11,102201929,DEL,AAAGGG,A,BIRC3_Coding
+6,87969506,DEL,AAG,A,ZNF292_Coding
+7,80027451,SNP,G,A,CD36_Intron
+7,140481402,SNP,C,G,BRAF_Coding
+2,198266834,SNP,T,C,SF3B1_Coding
+7,79765504,SNP,T,A,GNAI1_Intron
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+11,62571415,SNP,T,A,NXF1_Coding
+5,14212814,SNP,C,T,TRIO_Intron
+5,14497008,SNP,C,T,TRIO_Coding
+2,198267373,SNP,G,C,SF3B1_Coding
+7,79824937,SNP,C,A,GNAI1_Intron
+7,80043354,SNP,C,T,CD36_Intron
+10,123346878,DEL,AAA,A,FGFR2_Intron
+7,80186050,SNP,A,C,CD36_Intron
+X,123268810,SNP,G,T,STAG2_Intron
+7,80226955,SNP,C,A,CD36_Intron
+11,108190669,DEL,CCTTATCTCACAG,C,ATM_Intron
+10,123338715,SNP,C,T,FGFR2_Intron
+7,80022384,SNP,C,T,CD36_Intron
+7,80089020,SNP,A,G,CD36_Intron
+7,80131990,SNP,T,A,CD36_Intron
+7,80208661,SNP,T,C,CD36_Intron
+7,80004720,SNP,T,A,CD36_Intron
+7,140477807,SNP,C,T,BRAF_Coding
+11,62571028,SNP,G,A,NXF1_Coding
+X,123299116,SNP,A,C,STAG2_Intron
+11,108165652,SNP,A,T,ATM_Intron
+7,80242434,SNP,A,T,CD36_Intron
+7,80148718,DEL,AA,A,CD36_Intron
+11,62569215,SNP,A,C,NXF1_Coding
+16,81975352,SNP,G,A,PLCG2_Intron
+2,198265476,SNP,T,C,SF3B1_Coding
+7,80277243,SNP,T,A,CD36_Intron
+10,123306906,DEL,TT,T,FGFR2_Intron
+11,108185785,SNP,G,A,ATM_Intron
+17,7577566,SNP,T,C,TP53_Coding
+X,123385827,SNP,G,T,STAG2_Intron
+6,87967203,INS,G,GT,ZNF292_Coding
+7,80084069,SNP,C,T,CD36_Intron
+7,140453132,SNP,T,A,BRAF_Coding

drivers/Panc-Endocrine1_drivers.pkl

@@ -0,0 +1,3 @@
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+size 859384

drivers/Panc-Endocrine2_drivers.pkl

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:526ba1bd001e053c8586a157d38a34e7255be03bff1183772f7d5a2d988ac6c3
+size 859384

drivers/Panc-Endocrine_driver_mutations.csv

@@ -0,0 +1,138 @@
+chrom,start,mut,ref,alt,driver
+3,47111431,SNP,T,C,SETD2_Intron
+7,95583102,SNP,A,G,DYNC1I1_Intron
+X,76778750,SNP,C,A,ATRX_Coding
+10,89720749,DEL,CC,C,PTEN_Coding
+11,64577330,DEL,AAGAC,A,MEN1_Coding
+11,64577365,DEL,CCAGGCGGGTCGGGG,C,MEN1_Coding
+10,89670973,SNP,A,G,PTEN_Intron
+11,64575521,SNP,G,A,MEN1_Coding
+7,95661334,SNP,A,G,DYNC1I1_Intron
+11,64573703,SNP,C,G,MEN1_Intron
+11,64577260,SNP,G,A,MEN1_Coding
+3,47103828,SNP,G,A,SETD2_Coding
+11,64577201,DEL,GGTTCCATATGACATC,G,MEN1_Coding
+10,89711874,SNP,G,A,PTEN_Intron
+10,89717661,SNP,C,G,PTEN_Coding
+3,47158117,SNP,C,G,SETD2_Coding
+6,33289139,SNP,G,C,DAXX_Coding
+11,64572091,DEL,CC,C,MEN1_Coding
+11,64573740,SNP,A,G,MEN1_Coding
+7,95668639,SNP,G,A,DYNC1I1_Coding
+6,33288852,DEL,GG,G,DAXX_Coding
+6,33288570,SNP,G,A,DAXX_Coding
+10,89702537,SNP,A,G,PTEN_Intron
+11,64572615,SNP,A,G,MEN1_Coding
+7,95483527,SNP,T,C,DYNC1I1_Intron
+7,95636885,DEL,AA,A,DYNC1I1_Intron
+11,64577330,DEL,AAGAC,A,MEN1_Coding
+6,33289295,DEL,GGGGACCACCTCA,G,DAXX_Coding
+10,89664033,SNP,G,A,PTEN_Intron
+X,76843042,SNP,G,C,ATRX_Intron
+X,77017160,SNP,T,C,ATRX_Intron
+X,77017165,SNP,T,A,ATRX_Intron
+X,77017168,SNP,C,A,ATRX_Intron
+11,64572092,INS,C,CG,MEN1_Coding
+X,76937416,DEL,TT,T,ATRX_Coding
+6,33288573,SNP,G,A,DAXX_Coding
+11,64572532,SNP,G,A,MEN1_Coding
+3,47161947,SNP,T,G,SETD2_Coding
+3,47163566,SNP,G,A,SETD2_Coding
+X,77025083,SNP,A,G,ATRX_Intron
+11,64573238,INS,T,TG,MEN1_Coding
+11,64572589,SNP,A,G,MEN1_Coding
+6,33287842,SNP,G,A,DAXX_Coding
+7,95614265,SNP,G,T,DYNC1I1_Coding
+6,33288834,DEL,AAT,A,DAXX_Coding
+11,64574705,DEL,GGAGA,G,MEN1_Intron
+10,89626342,SNP,C,T,PTEN_Intron
+7,95615115,SNP,C,T,DYNC1I1_Intron
+X,76780700,SNP,T,C,ATRX_Intron
+X,76906594,SNP,A,C,ATRX_Intron
+11,64574683,DEL,GG,G,MEN1_Coding
+6,33288690,DEL,CCCCC,C,DAXX_Coding
+7,95518213,SNP,C,G,DYNC1I1_Intron
+7,95570181,SNP,G,C,DYNC1I1_Intron
+7,95657545,SNP,C,A,DYNC1I1_Coding
+X,76813091,INS,T,TCATAAATCTTATCTTC,ATRX_Coding
+7,95703531,SNP,G,A,DYNC1I1_Intron
+X,76939875,DEL,CC,C,ATRX_Coding
+11,64575514,DEL,AAGGGCCTGGCA,A,MEN1_Coding
+6,33287462,DEL,AAGCAT,A,DAXX_Coding
+10,89625903,SNP,A,T,PTEN_Intron
+3,47078230,SNP,T,C,SETD2_Intron
+7,95487782,SNP,A,T,DYNC1I1_Intron
+10,89625486,DEL,AAAAAGTTAGGCCTTCGGGCTTC,A,PTEN_Intron
+7,95693750,SNP,A,G,DYNC1I1_Intron
+7,95424463,SNP,C,T,DYNC1I1_Intron
+X,76890173,SNP,C,A,ATRX_Coding
+X,76997002,SNP,G,A,ATRX_Intron
+X,77023200,SNP,C,T,ATRX_Intron
+10,89677069,DEL,GGTGGAG,G,PTEN_Intron
+6,33288561,SNP,C,A,DAXX_Coding
+7,95496994,SNP,G,T,DYNC1I1_Intron
+7,95550034,SNP,G,T,DYNC1I1_Intron
+7,95625476,SNP,G,T,DYNC1I1_Intron
+11,64577429,DEL,GGTTGACAGCCAGAAAATGCTCC,G,MEN1_Coding
+X,76989420,SNP,C,T,ATRX_Intron
+X,76793787,SNP,G,A,ATRX_Intron
+3,47164314,DEL,AATTA,A,SETD2_Coding
+7,95525235,SNP,G,A,DYNC1I1_Intron
+X,76909691,SNP,C,T,ATRX_Intron
+11,64575482,SNP,C,A,MEN1_Coding
+6,33288561,SNP,C,A,DAXX_Coding
+7,95412073,SNP,G,T,DYNC1I1_Intron
+X,76941368,SNP,C,A,ATRX_Intron
+6,33289702,SNP,T,C,DAXX_Coding
+11,64575526,SNP,G,A,MEN1_Coding
+11,64575481,SNP,T,C,MEN1_Coding
+X,76919020,SNP,G,T,ATRX_Coding
+3,47159109,SNP,A,T,SETD2_Intron
+11,64575493,SNP,A,G,MEN1_Coding
+7,95645540,SNP,G,A,DYNC1I1_Intron
+7,95583824,SNP,A,G,DYNC1I1_Intron
+11,64575545,DEL,CC,C,MEN1_Coding
+11,64574617,DEL,AACCAGGCGCAGCCTGGCCACTTCCCTCTA,A,MEN1_Intron
+11,64575453,DEL,GG,G,MEN1_Coding
+11,64577447,SNP,C,G,MEN1_Coding
+3,47114586,DEL,AAGCTA,A,SETD2_Intron
+11,64575368,DEL,CCAGCCA,C,MEN1_Coding
+X,76820223,SNP,A,C,ATRX_Intron
+10,89717713,INS,G,GT,PTEN_Coding
+10,89721129,SNP,G,A,PTEN_Intron
+3,47113685,SNP,C,A,SETD2_Intron
+7,95577117,SNP,G,A,DYNC1I1_Intron
+3,47088090,SNP,G,A,SETD2_Coding
+7,95493689,SNP,C,T,DYNC1I1_Intron
+7,95609931,SNP,C,T,DYNC1I1_Intron
+11,64572016,DEL,TT,T,MEN1_Coding
+X,76939218,DEL,AAG,A,ATRX_Coding
+7,95614247,SNP,T,A,DYNC1I1_Coding
+11,64573243,SNP,C,T,MEN1_Intron
+X,76855014,DEL,CCTAT,C,ATRX_Coding
+10,89683263,SNP,G,C,PTEN_Intron
+10,89717704,INS,C,CCCTCAG,PTEN_Coding
+6,33287218,INS,G,GA,DAXX_Coding
+6,33289242,SNP,C,A,DAXX_Coding
+X,76793074,SNP,G,T,ATRX_Intron
+11,64575360,DEL,TTAC,T,MEN1_Intron
+7,95457108,SNP,G,T,DYNC1I1_Intron
+7,95501714,SNP,G,T,DYNC1I1_Intron
+7,95651625,SNP,C,A,DYNC1I1_Intron
+X,76814326,SNP,G,T,ATRX_Intron
+X,76937927,SNP,C,A,ATRX_Coding
+11,64572230,DEL,GG,G,MEN1_Coding
+11,64574482,SNP,C,A,MEN1_Intron
+6,33289341,DEL,GG,G,DAXX_Coding
+7,95628829,SNP,T,G,DYNC1I1_Intron
+10,89717769,INS,T,TA,PTEN_Coding
+11,64571981,DEL,AA,A,MEN1_Coding
+6,33289259,DEL,AAG,A,DAXX_Coding
+10,89639768,SNP,A,T,PTEN_Intron
+7,95542770,SNP,G,A,DYNC1I1_Intron
+X,76913043,SNP,A,G,ATRX_Intron
+X,76814276,SNP,C,A,ATRX_Coding
+X,76851345,SNP,C,T,ATRX_Intron
+3,47169647,SNP,T,C,SETD2_Intron
+10,89712007,SNP,G,T,PTEN_Coding
+11,64572564,DEL,AA,A,MEN1_Coding

drivers/Prost-AdenoCA_driver_mutations.csv

@@ -0,0 +1,687 @@
+chrom,start,mut,ref,alt,driver
+14,38061528,SNP,C,T,FOXA1_Coding
+4,54503696,SNP,T,C,FIP1L1_Intron
+1,23062275,SNP,A,G,EPHB2_Intron
+4,54479023,SNP,G,T,FIP1L1_Intron
+7,2071676,SNP,G,C,MAD1L1_Intron
+7,2178429,SNP,G,A,MAD1L1_Intron
+9,127842893,SNP,T,A,SCAI_Intron
+10,89717609,SNP,G,T,PTEN_Intron
+7,1999168,SNP,A,G,MAD1L1_Intron
+14,38061223,DEL,TTCTCGA,T,FOXA1_Coding
+7,1884010,SNP,G,A,MAD1L1_Intron
+7,2176187,SNP,C,G,MAD1L1_Intron
+4,54479023,SNP,G,T,FIP1L1_Intron
+7,2071676,SNP,G,C,MAD1L1_Intron
+7,2178429,SNP,G,A,MAD1L1_Intron
+10,89624612,INS,T,TCGGTAATC,PTEN_Intron
+X,66858548,SNP,C,T,AR_Intron
+X,66858550,SNP,C,G,AR_Intron
+1,23230318,SNP,G,T,EPHB2_Intron
+9,127787835,SNP,C,T,SCAI_Intron
+10,89630714,SNP,G,A,PTEN_Intron
+7,2017028,SNP,T,C,MAD1L1_Intron
+4,54537311,SNP,G,T,FIP1L1_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+4,55070692,SNP,G,T,FIP1L1_Intron
+7,2126361,SNP,T,G,MAD1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127770135,INS,T,TTC,SCAI_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+10,89704558,SNP,A,G,PTEN_Intron
+16,72849426,SNP,G,T,ZFHX3_Intron
+16,72944501,SNP,A,G,ZFHX3_Intron
+16,72959805,SNP,T,C,ZFHX3_Intron
+16,72963560,SNP,C,T,ZFHX3_Intron
+16,72989530,SNP,A,G,ZFHX3_Intron
+16,73067989,SNP,G,A,ZFHX3_Intron
+4,54500559,SNP,C,T,FIP1L1_Intron
+4,54695506,SNP,G,T,FIP1L1_Intron
+4,54757301,SNP,A,G,FIP1L1_Intron
+7,1948367,SNP,G,A,MAD1L1_Intron
+7,2005324,SNP,G,A,MAD1L1_Intron
+X,66879275,SNP,G,C,AR_Intron
+X,66881321,DEL,TTTTTT,T,AR_Intron
+10,89692904,SNP,C,T,PTEN_Coding
+4,54766640,SNP,A,C,FIP1L1_Intron
+4,54508169,SNP,C,A,FIP1L1_Intron
+7,1927057,INS,G,GTT,MAD1L1_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+4,54778034,SNP,C,T,FIP1L1_Intron
+7,1867221,SNP,C,A,MAD1L1_Intron
+7,2181106,SNP,C,T,MAD1L1_Intron
+X,66834502,SNP,A,C,AR_Intron
+10,89720817,DEL,AATG,A,PTEN_Coding
+4,54508169,SNP,C,A,FIP1L1_Intron
+7,1927057,INS,G,GTT,MAD1L1_Intron
+10,89692904,SNP,C,T,PTEN_Coding
+4,54766640,SNP,A,C,FIP1L1_Intron
+4,54837277,SNP,C,T,FIP1L1_Intron
+1,23113667,SNP,G,T,EPHB2_Intron
+10,89693669,SNP,A,G,PTEN_Intron
+4,55012476,SNP,T,A,FIP1L1_Intron
+7,45628338,SNP,C,T,ADCY1_Intron
+9,127818977,SNP,G,A,SCAI_Intron
+9,127818992,SNP,G,T,SCAI_Intron
+4,54256618,DEL,TTC,T,FIP1L1_Intron
+1,23113667,SNP,G,T,EPHB2_Intron
+10,89693669,SNP,A,G,PTEN_Intron
+9,127818977,SNP,G,A,SCAI_Intron
+9,127818992,SNP,G,T,SCAI_Intron
+4,54256618,DEL,TTC,T,FIP1L1_Intron
+4,54475836,DEL,AATACTATTATAGTACTATTATA,A,FIP1L1_Intron
+1,23113667,SNP,G,T,EPHB2_Intron
+10,89693669,SNP,A,G,PTEN_Intron
+16,73032857,SNP,G,C,ZFHX3_Intron
+9,127818977,SNP,G,A,SCAI_Intron
+9,127818992,SNP,G,T,SCAI_Intron
+4,54256618,DEL,TTC,T,FIP1L1_Intron
+4,54475836,DEL,AATACTATTATAGTACTATTATA,A,FIP1L1_Intron
+1,23113667,SNP,G,T,EPHB2_Intron
+16,73032857,SNP,G,C,ZFHX3_Intron
+7,2082964,SNP,C,A,MAD1L1_Intron
+9,127818977,SNP,G,A,SCAI_Intron
+9,127818992,SNP,G,T,SCAI_Intron
+4,54256618,DEL,TTC,T,FIP1L1_Intron
+4,54475836,DEL,AATACTATTATAGTACTATTATA,A,FIP1L1_Intron
+4,54752952,SNP,G,T,FIP1L1_Intron
+7,1952642,SNP,C,G,MAD1L1_Intron
+7,1952673,SNP,C,G,MAD1L1_Intron
+7,1952700,SNP,C,T,MAD1L1_Intron
+7,1952773,SNP,C,G,MAD1L1_Intron
+7,1981655,SNP,C,G,MAD1L1_Intron
+7,1981668,SNP,T,G,MAD1L1_Intron
+7,1981849,SNP,C,T,MAD1L1_Intron
+7,1983201,SNP,C,A,MAD1L1_Intron
+7,1983524,SNP,C,T,MAD1L1_Intron
+7,1983892,SNP,C,A,MAD1L1_Intron
+7,1984498,SNP,C,T,MAD1L1_Intron
+7,1984863,SNP,C,T,MAD1L1_Intron
+7,2045259,SNP,G,A,MAD1L1_Intron
+7,2045343,SNP,G,T,MAD1L1_Intron
+7,2045490,SNP,G,C,MAD1L1_Intron
+7,2045573,SNP,G,C,MAD1L1_Intron
+7,2045589,SNP,G,A,MAD1L1_Intron
+7,2045606,SNP,G,A,MAD1L1_Intron
+7,2045773,SNP,G,C,MAD1L1_Intron
+7,2045894,SNP,G,C,MAD1L1_Intron
+7,2046055,SNP,G,C,MAD1L1_Intron
+7,2046086,SNP,G,C,MAD1L1_Intron
+7,2046129,SNP,G,C,MAD1L1_Intron
+7,2046310,SNP,G,C,MAD1L1_Intron
+7,2046409,SNP,G,C,MAD1L1_Intron
+7,2046493,SNP,G,T,MAD1L1_Intron
+7,2179942,SNP,C,T,MAD1L1_Intron
+7,2196180,SNP,C,T,MAD1L1_Intron
+4,54778034,SNP,C,T,FIP1L1_Intron
+7,1867221,SNP,C,A,MAD1L1_Intron
+7,2181106,SNP,C,T,MAD1L1_Intron
+X,66834502,SNP,A,C,AR_Intron
+10,89720817,DEL,AATG,A,PTEN_Coding
+16,72995869,SNP,G,C,ZFHX3_Intron
+16,73076951,SNP,G,C,ZFHX3_Intron
+4,54936715,SNP,G,T,FIP1L1_Intron
+7,2197035,SNP,G,A,MAD1L1_Intron
+7,45617281,SNP,G,T,ADCY1_Intron
+7,45673614,SNP,T,G,ADCY1_Intron
+7,45687535,SNP,A,T,ADCY1_Intron
+1,23072914,DEL,TT,T,EPHB2_Intron
+1,23187128,DEL,GGATGGAGGAGG,G,EPHB2_Intron
+7,45655949,DEL,AACAAGAACACT,A,ADCY1_Intron
+9,127811017,DEL,TTTAA,T,SCAI_Intron
+1,23101571,SNP,C,G,EPHB2_Intron
+10,89629051,SNP,C,T,PTEN_Intron
+4,54503407,SNP,A,T,FIP1L1_Intron
+7,1856175,SNP,A,G,MAD1L1_Intron
+7,2120640,SNP,C,A,MAD1L1_Intron
+1,23101571,SNP,C,G,EPHB2_Intron
+10,89629051,SNP,C,T,PTEN_Intron
+4,54503407,SNP,A,T,FIP1L1_Intron
+4,54732929,SNP,C,G,FIP1L1_Intron
+7,1856175,SNP,A,G,MAD1L1_Intron
+7,2120640,SNP,C,A,MAD1L1_Intron
+4,54936715,SNP,G,T,FIP1L1_Intron
+4,54940726,SNP,C,A,FIP1L1_Intron
+4,55087060,SNP,G,C,FIP1L1_Intron
+7,2197035,SNP,G,A,MAD1L1_Intron
+7,45617281,SNP,G,T,ADCY1_Intron
+7,45673614,SNP,T,G,ADCY1_Intron
+1,23072914,DEL,TT,T,EPHB2_Intron
+1,23187128,DEL,GGATGGAGGAGG,G,EPHB2_Intron
+7,45655949,DEL,AACAAGAACACT,A,ADCY1_Intron
+9,127811017,DEL,TTTAA,T,SCAI_Intron
+10,89692904,SNP,C,T,PTEN_Coding
+4,54280003,SNP,C,T,FIP1L1_Intron
+4,54567851,SNP,G,A,FIP1L1_Intron
+4,54766640,SNP,A,C,FIP1L1_Intron
+7,2185069,SNP,G,A,MAD1L1_Intron
+X,66890084,SNP,A,G,AR_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127770135,INS,T,TTC,SCAI_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+1,23113667,SNP,G,T,EPHB2_Intron
+10,89693669,SNP,A,G,PTEN_Intron
+7,45628338,SNP,C,T,ADCY1_Intron
+9,127818977,SNP,G,A,SCAI_Intron
+9,127818992,SNP,G,T,SCAI_Intron
+4,54256618,DEL,TTC,T,FIP1L1_Intron
+X,66847889,SNP,G,T,AR_Intron
+X,66871816,SNP,T,C,AR_Intron
+16,73064524,DEL,GG,G,ZFHX3_Intron
+7,1927057,INS,G,GTT,MAD1L1_Intron
+4,54752952,SNP,G,T,FIP1L1_Intron
+7,2179942,SNP,C,T,MAD1L1_Intron
+7,2196180,SNP,C,T,MAD1L1_Intron
+4,54752952,SNP,G,T,FIP1L1_Intron
+4,55062826,SNP,G,A,FIP1L1_Intron
+7,2179942,SNP,C,T,MAD1L1_Intron
+7,2196180,SNP,C,T,MAD1L1_Intron
+9,127876071,SNP,G,A,SCAI_Intron
+X,66839173,SNP,C,G,AR_Intron
+7,1915953,INS,G,GC,MAD1L1_Intron
+4,54778034,SNP,C,T,FIP1L1_Intron
+7,1867221,SNP,C,A,MAD1L1_Intron
+7,2181106,SNP,C,T,MAD1L1_Intron
+X,66781262,SNP,C,A,AR_Intron
+X,66834502,SNP,A,C,AR_Intron
+10,89720817,DEL,AATG,A,PTEN_Coding
+10,89704558,SNP,A,G,PTEN_Intron
+16,72849426,SNP,G,T,ZFHX3_Intron
+16,72944501,SNP,A,G,ZFHX3_Intron
+16,72959805,SNP,T,C,ZFHX3_Intron
+4,54757301,SNP,A,G,FIP1L1_Intron
+7,1948367,SNP,G,A,MAD1L1_Intron
+7,2005324,SNP,G,A,MAD1L1_Intron
+X,66881321,DEL,TTTTTT,T,AR_Intron
+4,54778034,SNP,C,T,FIP1L1_Intron
+7,1867221,SNP,C,A,MAD1L1_Intron
+7,2181106,SNP,C,T,MAD1L1_Intron
+X,66834502,SNP,A,C,AR_Intron
+10,89720817,DEL,AATG,A,PTEN_Coding
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+X,66894022,DEL,TTC,T,AR_Intron
+16,72944154,SNP,G,A,ZFHX3_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+1,23101571,SNP,C,G,EPHB2_Intron
+10,89629051,SNP,C,T,PTEN_Intron
+4,54503407,SNP,A,T,FIP1L1_Intron
+7,1856175,SNP,A,G,MAD1L1_Intron
+7,2120640,SNP,C,A,MAD1L1_Intron
+1,23101571,SNP,C,G,EPHB2_Intron
+10,89629051,SNP,C,T,PTEN_Intron
+4,54503407,SNP,A,T,FIP1L1_Intron
+4,54787231,SNP,G,T,FIP1L1_Intron
+4,54794041,SNP,T,A,FIP1L1_Intron
+7,1856175,SNP,A,G,MAD1L1_Intron
+7,2120640,SNP,C,A,MAD1L1_Intron
+4,54724616,DEL,TTTATTCTACT,T,FIP1L1_Intron
+4,54490005,SNP,A,T,FIP1L1_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127894477,SNP,C,T,SCAI_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+10,89692904,SNP,C,T,PTEN_Coding
+4,54766640,SNP,A,C,FIP1L1_Intron
+9,127865134,SNP,C,T,SCAI_Intron
+4,54508169,SNP,C,A,FIP1L1_Intron
+7,2036386,SNP,C,T,MAD1L1_Intron
+7,1927057,INS,G,GTT,MAD1L1_Intron
+4,54508169,SNP,C,A,FIP1L1_Intron
+7,1927057,INS,G,GTT,MAD1L1_Intron
+4,54554655,DNP,GC,TT,FIP1L1_Intron
+4,54936715,SNP,G,T,FIP1L1_Intron
+4,54940726,SNP,C,A,FIP1L1_Intron
+4,55087060,SNP,G,C,FIP1L1_Intron
+7,2197035,SNP,G,A,MAD1L1_Intron
+7,2219765,SNP,C,T,MAD1L1_Intron
+7,45617281,SNP,G,T,ADCY1_Intron
+7,45673614,SNP,T,G,ADCY1_Intron
+1,23072914,DEL,TT,T,EPHB2_Intron
+1,23187128,DEL,GGATGGAGGAGG,G,EPHB2_Intron
+7,45655949,DEL,AACAAGAACACT,A,ADCY1_Intron
+9,127811017,DEL,TTTAA,T,SCAI_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+4,54647243,SNP,G,T,FIP1L1_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127770135,INS,T,TTC,SCAI_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127770135,INS,T,TTC,SCAI_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+4,54537311,SNP,G,T,FIP1L1_Intron
+4,54647243,SNP,G,T,FIP1L1_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127770135,INS,T,TTC,SCAI_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127768609,SNP,C,T,SCAI_Intron
+9,127898790,SNP,A,T,SCAI_Intron
+X,66894022,DEL,TTC,T,AR_Intron
+1,23101571,SNP,C,G,EPHB2_Intron
+10,89629051,SNP,C,T,PTEN_Intron
+4,54503407,SNP,A,T,FIP1L1_Intron
+4,54604743,SNP,A,C,FIP1L1_Intron
+4,54744243,SNP,T,C,FIP1L1_Intron
+7,1856175,SNP,A,G,MAD1L1_Intron
+7,2120640,SNP,C,A,MAD1L1_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+9,127898790,SNP,A,T,SCAI_Intron
+17,47696643,SNP,A,C,SPOP_Coding
+4,54799510,SNP,T,C,FIP1L1_Intron
+4,55021640,SNP,G,A,FIP1L1_Intron
+7,45719309,SNP,A,G,ADCY1_Intron
+9,127842562,INS,G,GA,SCAI_Intron
+7,2124652,SNP,G,A,MAD1L1_Intron
+7,2224179,SNP,T,A,MAD1L1_Intron
+16,73008801,SNP,C,A,ZFHX3_Intron
+4,55007425,SNP,C,T,FIP1L1_Intron
+4,55090946,SNP,G,A,FIP1L1_Intron
+17,47696426,SNP,A,T,SPOP_Coding
+4,54772873,SNP,C,T,FIP1L1_Intron
+7,45649931,SNP,A,T,ADCY1_Intron
+7,45659310,SNP,G,C,ADCY1_Intron
+9,127719766,SNP,C,T,SCAI_Intron
+16,73051353,SNP,C,G,ZFHX3_Intron
+X,66909029,SNP,T,A,AR_Intron
+10,89700929,DEL,GGTTGGAAAGAGAAAAAAATATCAGTTGTCTGCTTCACATTTGTTCTCAATAATTAGTTTCATA,G,PTEN_Intron
+9,127896578,DEL,AAA,A,SCAI_Intron
+7,2071676,SNP,G,C,MAD1L1_Intron
+7,2178429,SNP,G,A,MAD1L1_Intron
+7,1960326,SNP,G,C,MAD1L1_Intron
+14,38060985,INS,A,AGAGTCTG,FOXA1_Coding
+9,127743022,SNP,T,A,SCAI_Intron
+4,54310172,SNP,C,T,FIP1L1_Intron
+7,45669797,SNP,G,A,ADCY1_Intron
+10,89624272,INS,T,TA,PTEN_Coding
+16,73026755,DEL,GGCCAGGCGC,G,ZFHX3_Intron
+4,54668732,SNP,C,T,FIP1L1_Intron
+7,2178719,SNP,G,A,MAD1L1_Intron
+4,54794398,SNP,C,G,FIP1L1_Intron
+4,55077378,SNP,T,A,FIP1L1_Intron
+14,38061208,SNP,G,C,FOXA1_Coding
+16,73009836,SNP,A,C,ZFHX3_Intron
+16,73009932,SNP,A,T,ZFHX3_Intron
+4,55055481,SNP,T,C,FIP1L1_Intron
+7,45702138,SNP,C,G,ADCY1_Intron
+4,54663735,SNP,C,A,FIP1L1_Intron
+9,127772673,SNP,T,G,SCAI_Intron
+7,1992307,DEL,CC,C,MAD1L1_Intron
+4,55073207,SNP,G,T,FIP1L1_Intron
+7,2194649,SNP,C,G,MAD1L1_Intron
+7,1992307,DEL,CC,C,MAD1L1_Intron
+1,23039929,SNP,G,A,EPHB2_Intron
+16,72845727,SNP,G,A,ZFHX3_Intron
+4,54940279,SNP,G,A,FIP1L1_Intron
+1,23046512,SNP,C,G,EPHB2_Intron
+14,38061231,SNP,A,G,FOXA1_Coding
+9,127771555,SNP,T,C,SCAI_Intron
+7,1992307,DEL,CC,C,MAD1L1_Intron
+10,89712019,SNP,A,C,PTEN_Intron
+16,72963723,SNP,C,T,ZFHX3_Intron
+7,45724549,SNP,T,C,ADCY1_Intron
+7,2114057,SNP,G,C,MAD1L1_Intron
+7,45621505,SNP,C,T,ADCY1_Intron
+7,45650855,SNP,G,T,ADCY1_Intron
+4,54599905,SNP,A,C,FIP1L1_Intron
+4,55053135,SNP,G,A,FIP1L1_Intron
+16,72963421,SNP,T,A,ZFHX3_Intron
+4,54479023,SNP,G,T,FIP1L1_Intron
+7,2071676,SNP,G,C,MAD1L1_Intron
+7,2178429,SNP,G,A,MAD1L1_Intron
+7,45632723,SNP,G,T,ADCY1_Intron
+4,54554196,SNP,G,A,FIP1L1_Intron
+4,54856034,DEL,TT,T,FIP1L1_Intron
+X,66817044,SNP,G,A,AR_Intron
+1,23092758,SNP,A,C,EPHB2_Intron
+7,2091156,SNP,G,A,MAD1L1_Intron
+1,23107034,SNP,A,G,EPHB2_Intron
+4,54654129,SNP,A,G,FIP1L1_Intron
+4,54956963,SNP,T,A,FIP1L1_Intron
+7,1898700,SNP,C,T,MAD1L1_Intron
+10,89690818,DEL,TT,T,PTEN_Coding
+14,38061192,DEL,AA,A,FOXA1_Coding
+10,89692961,SNP,C,T,PTEN_Coding
+7,2077971,SNP,T,C,MAD1L1_Intron
+9,127736964,SNP,A,C,SCAI_Intron
+X,66883825,SNP,G,A,AR_Intron
+16,72946969,SNP,G,T,ZFHX3_Intron
+4,54992301,SNP,G,T,FIP1L1_Intron
+4,54256893,SNP,T,G,FIP1L1_Intron
+4,54660035,SNP,T,C,FIP1L1_Intron
+4,54961353,SNP,T,C,FIP1L1_Intron
+7,45705619,SNP,C,T,ADCY1_Intron
+9,127716351,DEL,TT,T,SCAI_Intron
+4,54854458,SNP,T,G,FIP1L1_Intron
+9,127813521,SNP,C,T,SCAI_Intron
+X,66858826,SNP,A,G,AR_Intron
+16,73051353,SNP,C,G,ZFHX3_Intron
+X,66893212,DEL,TTC,T,AR_Intron
+17,47696424,SNP,G,C,SPOP_Coding
+X,66834642,SNP,T,C,AR_Intron
+1,23047653,SNP,G,T,EPHB2_Intron
+7,2247745,SNP,C,T,MAD1L1_Intron
+10,89668891,DEL,TT,T,PTEN_Intron
+1,23092365,SNP,C,A,EPHB2_Intron
+16,73015384,SNP,T,C,ZFHX3_Intron
+4,54471757,SNP,C,A,FIP1L1_Intron
+7,45661799,SNP,G,T,ADCY1_Intron
+4,54303637,SNP,G,C,FIP1L1_Intron
+4,54568872,SNP,C,G,FIP1L1_Intron
+7,2217580,SNP,C,T,MAD1L1_Intron
+10,89692910,SNP,G,A,PTEN_Coding
+16,73060843,SNP,T,C,ZFHX3_Intron
+4,54475629,SNP,G,A,FIP1L1_Intron
+9,127734694,SNP,A,C,SCAI_Intron
+X,66826885,SNP,A,T,AR_Intron
+7,2081497,SNP,A,G,MAD1L1_Intron
+1,23136032,SNP,G,T,EPHB2_Intron
+16,72848932,SNP,G,A,ZFHX3_Intron
+4,55031142,SNP,C,T,FIP1L1_Intron
+4,55080613,SNP,G,C,FIP1L1_Intron
+7,2119331,SNP,A,G,MAD1L1_Intron
+7,45622073,SNP,G,A,ADCY1_Intron
+7,45745766,SNP,C,T,ADCY1_Intron
+4,54768364,SNP,T,C,FIP1L1_Intron
+7,2017028,SNP,T,C,MAD1L1_Intron
+4,55008108,SNP,T,C,FIP1L1_Intron
+16,73054181,SNP,T,G,ZFHX3_Intron
+4,54519505,SNP,A,C,FIP1L1_Intron
+1,23179296,SNP,G,A,EPHB2_Intron
+16,72936066,SNP,A,C,ZFHX3_Intron
+9,127755737,SNP,C,T,SCAI_Intron
+17,47696432,SNP,A,C,SPOP_Coding
+7,2024302,SNP,G,A,MAD1L1_Intron
+7,2104771,SNP,C,A,MAD1L1_Intron
+16,72898418,SNP,G,C,ZFHX3_Intron
+4,54622460,SNP,T,C,FIP1L1_Intron
+7,45623553,SNP,T,G,ADCY1_Intron
+1,23123558,SNP,T,G,EPHB2_Intron
+14,38061192,SNP,A,C,FOXA1_Coding
+4,54542376,SNP,G,T,FIP1L1_Intron
+4,54991461,SNP,G,A,FIP1L1_Intron
+7,2021117,SNP,C,T,MAD1L1_Intron
+7,2208306,SNP,T,G,MAD1L1_Intron
+16,72923625,DEL,CCT,C,ZFHX3_Intron
+1,23047880,SNP,C,T,EPHB2_Intron
+10,89624397,SNP,G,A,PTEN_Intron
+4,54581994,SNP,A,T,FIP1L1_Intron
+4,54754459,DEL,AAAT,A,FIP1L1_Intron
+7,1999143,SNP,G,A,MAD1L1_Intron
+4,54712520,SNP,T,C,FIP1L1_Intron
+7,1948461,SNP,C,T,MAD1L1_Intron
+7,2264183,SNP,G,A,MAD1L1_Intron
+7,1992307,DEL,CC,C,MAD1L1_Intron
+17,47696426,SNP,A,C,SPOP_Coding
+7,2032363,SNP,C,A,MAD1L1_Intron
+7,2190098,SNP,T,G,MAD1L1_Intron
+16,72833264,SNP,G,A,ZFHX3_Intron
+7,1992307,DEL,CC,C,MAD1L1_Intron
+1,23203043,SNP,T,A,EPHB2_Intron
+16,72881440,SNP,G,A,ZFHX3_Intron
+16,72891712,SNP,A,C,ZFHX3_Intron
+16,73018397,SNP,C,T,ZFHX3_Intron
+4,54975764,SNP,C,T,FIP1L1_Intron
+7,1886622,SNP,C,T,MAD1L1_Intron
+7,2205958,SNP,C,T,MAD1L1_Intron
+X,66808686,SNP,G,T,AR_Intron
+4,54320153,INS,T,TA,FIP1L1_Intron
+7,2170051,SNP,T,C,MAD1L1_Intron
+X,66940240,SNP,A,C,AR_Intron
+4,54973359,SNP,C,T,FIP1L1_Intron
+7,2056931,SNP,A,C,MAD1L1_Intron
+9,127737394,SNP,G,C,SCAI_Intron
+1,23121716,SNP,C,G,EPHB2_Intron
+4,54568886,SNP,A,C,FIP1L1_Intron
+4,54758780,SNP,G,A,FIP1L1_Intron
+7,1906108,SNP,C,T,MAD1L1_Intron
+7,45741502,SNP,T,C,ADCY1_Intron
+17,47696425,SNP,A,G,SPOP_Coding
+10,89650019,SNP,G,A,PTEN_Intron
+10,89653922,SNP,T,G,PTEN_Intron
+7,2174557,SNP,G,A,MAD1L1_Intron
+4,55031161,SNP,G,C,FIP1L1_Intron
+1,23212896,SNP,C,T,EPHB2_Intron
+16,73067812,SNP,C,G,ZFHX3_Intron
+7,2209191,SNP,G,A,MAD1L1_Intron
+17,47696426,SNP,A,C,SPOP_Coding
+7,2071676,SNP,G,C,MAD1L1_Intron
+7,2178429,SNP,G,A,MAD1L1_Intron
+10,89647253,SNP,G,A,PTEN_Intron
+16,72903368,SNP,C,A,ZFHX3_Intron
+10,89691989,DEL,AAAACAAGTTTTTTTAAA,A,PTEN_Intron
+4,54786174,SNP,T,G,FIP1L1_Intron
+7,2184412,SNP,T,G,MAD1L1_Intron
+7,45740914,SNP,G,T,ADCY1_Intron
+9,127840624,SNP,G,A,SCAI_Intron
+10,89702554,SNP,G,A,PTEN_Intron
+4,54572168,SNP,G,A,FIP1L1_Intron
+4,54479023,SNP,G,T,FIP1L1_Intron
+7,2071676,SNP,G,C,MAD1L1_Intron
+7,2178429,SNP,G,A,MAD1L1_Intron
+16,72957891,SNP,G,C,ZFHX3_Intron
+17,47696425,SNP,A,G,SPOP_Coding
+17,47696644,SNP,A,T,SPOP_Coding
+4,54529994,SNP,A,C,FIP1L1_Intron
+1,23058058,SNP,C,T,EPHB2_Intron
+4,54262819,SNP,C,T,FIP1L1_Intron
+4,54563896,SNP,C,T,FIP1L1_Intron
+7,2012827,SNP,C,T,MAD1L1_Intron
+7,1911367,SNP,C,G,MAD1L1_Intron
+9,127732035,SNP,T,G,SCAI_Intron
+16,73008236,SNP,A,G,ZFHX3_Intron
+16,72869345,SNP,A,C,ZFHX3_Intron
+4,54532284,SNP,C,A,FIP1L1_Intron
+4,54704580,SNP,T,C,FIP1L1_Intron
+7,1878121,SNP,C,T,MAD1L1_Intron
+7,2019228,SNP,C,T,MAD1L1_Intron
+1,23082592,SNP,G,A,EPHB2_Intron
+1,23127474,SNP,G,A,EPHB2_Intron
+4,54647917,SNP,C,G,FIP1L1_Intron
+4,54655990,SNP,C,T,FIP1L1_Intron
+4,54987305,SNP,G,A,FIP1L1_Intron
+7,2156266,SNP,G,C,MAD1L1_Intron
+4,54502066,SNP,G,A,FIP1L1_Intron
+4,54582936,SNP,C,A,FIP1L1_Intron
+4,54824350,SNP,G,T,FIP1L1_Intron
+7,2065524,SNP,G,T,MAD1L1_Intron
+4,54531621,SNP,C,T,FIP1L1_Intron
+4,54533345,SNP,C,T,FIP1L1_Intron
+4,54703624,SNP,T,A,FIP1L1_Intron
+7,1923972,SNP,C,A,MAD1L1_Intron
+16,72884486,SNP,T,C,ZFHX3_Intron
+X,66858146,SNP,G,A,AR_Intron
+X,66858148,SNP,T,C,AR_Intron
+4,55057268,SNP,C,A,FIP1L1_Intron
+7,2011558,SNP,A,C,MAD1L1_Intron
+9,127782377,SNP,A,C,SCAI_Intron
+4,55089567,SNP,C,T,FIP1L1_Intron
+9,127899457,SNP,G,A,SCAI_Intron
+16,72924165,DEL,TTATAAGGGGCTTTTCCCTACTTCA,T,ZFHX3_Intron
+4,54937836,SNP,T,G,FIP1L1_Intron
+7,2101809,SNP,G,A,MAD1L1_Intron
+16,72862722,DEL,CCCC,C,ZFHX3_Intron
+16,72966126,SNP,A,G,ZFHX3_Intron
+7,45709491,SNP,C,T,ADCY1_Intron
+7,2006452,SNP,C,T,MAD1L1_Intron
+9,127728023,SNP,A,C,SCAI_Intron
+9,127742490,SNP,G,A,SCAI_Intron
+16,72870403,SNP,T,G,ZFHX3_Intron
+4,54531532,SNP,A,G,FIP1L1_Intron
+4,54682200,SNP,G,A,FIP1L1_Intron
+9,127837693,SNP,T,C,SCAI_Intron
+16,72965007,SNP,C,A,ZFHX3_Intron
+4,54294810,SNP,C,T,FIP1L1_Intron
+4,55030074,SNP,G,C,FIP1L1_Intron
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