Add relaxed glycine PT scan (579 xTB-relaxed geometries, wB97X-D3 E/F/H).
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/README.md +28 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_energies.csv +0 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_energies.parquet +3 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_vib_cache.npz +3 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_vib_summary.csv +0 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/stationary_points.json +20 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/ts_xtb_saddle.json +19 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/xtb_relaxed_arrays.npz +3 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/h5/glycine_pt_relaxed.h5 +3 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/metadata.csv +0 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/raw/orca_outputs.tar.gz +3 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/scan_metadata.json +63 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/summary.json +62 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0000_s_-1.800_sig_3.533.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0001_s_-1.800_sig_3.604.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0002_s_-1.800_sig_3.675.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0003_s_-1.680_sig_3.392.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0004_s_-1.680_sig_3.462.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0005_s_-1.680_sig_3.533.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0006_s_-1.680_sig_3.604.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0007_s_-1.680_sig_3.675.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0008_s_-1.680_sig_3.746.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0009_s_-1.680_sig_3.817.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0010_s_-1.560_sig_3.321.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0011_s_-1.560_sig_3.392.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0012_s_-1.560_sig_3.462.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0013_s_-1.560_sig_3.533.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0014_s_-1.560_sig_3.604.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0015_s_-1.560_sig_3.675.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0016_s_-1.560_sig_3.746.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0017_s_-1.560_sig_3.817.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0018_s_-1.560_sig_3.887.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0019_s_-1.440_sig_3.179.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0020_s_-1.440_sig_3.250.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0021_s_-1.440_sig_3.321.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0022_s_-1.440_sig_3.392.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0023_s_-1.440_sig_3.462.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0024_s_-1.440_sig_3.533.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0025_s_-1.440_sig_3.604.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0026_s_-1.440_sig_3.675.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0027_s_-1.440_sig_3.746.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0028_s_-1.440_sig_3.817.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0029_s_-1.440_sig_3.887.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0030_s_-1.440_sig_3.958.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0031_s_-1.440_sig_4.029.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0032_s_-1.320_sig_3.037.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0033_s_-1.320_sig_3.108.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0034_s_-1.320_sig_3.179.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0035_s_-1.320_sig_3.250.xyz +12 -0
- orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0036_s_-1.320_sig_3.321.xyz +12 -0
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/README.md
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# ORCA wB97X-D3/6-31G(d) Glycine Proton-Transfer Relaxed Scan
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This folder contains 579 ORCA analytical Hessian calculations for a 2D scan of
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glycine intramolecular proton transfer on **GFN2-xTB relaxed** geometries.
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- Source reaction: Transition1x `test` split, `sample_id=5`, `rxn1961`
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- Formula: `C2H5NO2`
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- Method: wB97X-D3
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- Basis: 6-31G(d)
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- ORCA version: 6.1.1
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- ORCA Freq route: `! wB97X-D3 6-31G(d) TightSCF Grid5 FinalGrid6 Freq`
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- ORCA EnGrad route: `! wB97X-D3 6-31G(d) TightSCF EnGrad`
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- Grid coordinates: `s = q_nh - q_oh`, `sigma = q_nh + q_oh` (Å)
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- Bond constraints during xTB relaxation: `q_nh = d(N4,H9)`, `q_oh = d(O3,H9)`
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- Geometry construction: GFN2-xTB constrained relaxation at each grid node; all other
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degrees of freedom relax while the two O–H / N–H bond lengths are held fixed.
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- Geometry files: `xyz/*.xyz` in Angstrom
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- Targets: `h5/glycine_pt_relaxed.h5`
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- Diagnostics: `diagnostics/orca_vib_summary.csv`, optional `orca_vib_cache.npz`
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- Raw ORCA files: `raw/orca_outputs.tar.gz` containing `.out`, `.hess`, `.engrad`,
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and `.inp` files from the Freq and EnGrad passes.
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The HDF5 file uses atomic units for model targets:
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`coordinates_bohr`, `energy_hartree`, `gradient_hartree_per_bohr`,
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`forces_hartree_per_bohr`, and `hessian_hartree_per_bohr2`.
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Scan descriptors are stored as `s`, `sigma`, `q_nh_angstrom`, `q_oh_angstrom`
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(relaxed bond lengths), plus target grid indices `i_s`, `i_sigma`.
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See `metadata.csv` for the per-geometry mapping.
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_energies.csv
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_energies.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:1341512848f6e05631a320ccff7f63325c400f268544800a181945229f15dff2
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size 60124
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_vib_cache.npz
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version https://git-lfs.github.com/spec/v1
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oid sha256:b1289c901faeb2518881f888467c2fc4d5e4bdb12c54d88b3fb25d4e4b2d0551
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size 12687972
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/orca_vib_summary.csv
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/stationary_points.json
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{
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"reactant": {
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"q_nh": 1.0052107627392792,
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"q_oh": 2.525047271189948,
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"s": -1.5198365084506689,
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"sigma": 3.5302580339292273
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},
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"product": {
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"q_nh": 2.268981894761696,
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"q_oh": 0.9658311220504712,
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"s": 1.3031507727112248,
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"sigma": 3.234813016812167
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},
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"ts": {
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"q_nh": 1.3348248354527743,
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"q_oh": 1.324860251741224,
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"s": 0.00996458371155029,
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"sigma": 2.6596850871939983
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}
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}
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/ts_xtb_saddle.json
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{
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"method": "GFN2-xTB Sella order-1 saddle",
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"seed": "runs/glycine_pt_scan_n36/xyz/reference_ts.xyz",
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"q_nh": 1.3348248354527743,
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"q_oh": 1.324860251741224,
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"s": 0.00996458371155029,
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"sigma": 2.6596850871939983,
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"n_imaginary": 1,
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"lowest_freqs_cm1": [
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-1791.0207386789293,
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-3.5015290270315735e-05,
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-1.8063895480947972e-05,
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-1.146715003925726e-05,
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1.508997219678165e-05,
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1.9078492916146392e-05
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],
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"softest_mode_pt_alignment": 0.9619865914879778,
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"fmax_reached": 0.00847284144152444
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}
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/diagnostics/xtb_relaxed_arrays.npz
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version https://git-lfs.github.com/spec/v1
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oid sha256:91b1fa5a5e4be72953ea1365c95b5dc4a8a710ddbd47d48f5ce9503420baca77
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size 150047
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/h5/glycine_pt_relaxed.h5
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version https://git-lfs.github.com/spec/v1
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oid sha256:598f0f1d272b13aa1a8130c9ff171673e90754528a5940b4cf709419ca4d5e10
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size 4380321
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/metadata.csv
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The diff for this file is too large to render.
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/raw/orca_outputs.tar.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:e3b4fa14b53cdfd1dd6988b9d284192d59fa45e6521ed38d1522a5df01e650ca
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size 24182365
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orca_wb97x_d3_631gd_glycine_pt_relaxed_579/scan_metadata.json
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{
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"charge": 0,
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"description": "GFN2-xTB constrained-relaxed 2D glycine proton-transfer scan in (s, sigma)",
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"energy_ceiling_kcal": null,
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"fmax": 0.1,
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"h_atom": 9,
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"max_steps": 300,
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"multiplicity": 1,
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"n_atom": 4,
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"n_nodes_written": 579,
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"n_s": 34,
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"n_sigma": 25,
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"n_skipped_placement": 0,
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"n_skipped_q_bounds": 271,
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"o_atom": 3,
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"orca_engrad_route": "! wB97X-D3 6-31G(d) TightSCF EnGrad",
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"orca_freq_route": "! wB97X-D3 6-31G(d) TightSCF Grid5 FinalGrid6 Freq",
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"product_xyz": "/lustre/fs12/portfolios/nvr/projects/nvr_qualg_lmbm/users/anburger/hip/runs/glycine_pt_scan_n36/xyz/reference_product.xyz",
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"q_bounds": [
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0.85,
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2.75
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],
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"reactant_xyz": "/lustre/fs12/portfolios/nvr/projects/nvr_qualg_lmbm/users/anburger/hip/runs/glycine_pt_scan_n36/xyz/reference_reactant.xyz",
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"references": [
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{
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"converged": true,
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"energy_ev": -487.1356265076903,
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"label": "reactant",
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"q_nh": 1.005210762796859,
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"q_oh": 2.5250472712227414,
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"s": -1.5198365084258825,
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"sigma": 3.5302580340196004
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},
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{
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"converged": true,
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"energy_ev": -486.56487517562977,
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| 37 |
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"label": "ts",
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| 38 |
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"q_nh": 2.2682526586060874,
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| 39 |
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"q_oh": 0.9672372245950958,
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"s": 1.3010154340109916,
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"sigma": 3.235489883201183
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},
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{
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"converged": true,
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"energy_ev": -486.5660247818939,
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"label": "product",
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"q_nh": 2.2689818947481313,
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"q_oh": 0.9658311220383046,
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"s": 1.3031507727098268,
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"sigma": 3.2348130167864357
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+
}
|
| 52 |
+
],
|
| 53 |
+
"s_range": [
|
| 54 |
+
-2.16,
|
| 55 |
+
1.8
|
| 56 |
+
],
|
| 57 |
+
"sigma_range": [
|
| 58 |
+
2.4,
|
| 59 |
+
4.1
|
| 60 |
+
],
|
| 61 |
+
"ts_xyz": "/lustre/fs12/portfolios/nvr/projects/nvr_qualg_lmbm/users/anburger/hip/runs/glycine_pt_scan_n36/xyz/reference_ts.xyz",
|
| 62 |
+
"xtb_method": "GFN2-xTB"
|
| 63 |
+
}
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/summary.json
ADDED
|
@@ -0,0 +1,62 @@
|
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|
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|
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|
|
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|
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|
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|
|
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|
|
|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "orca_wb97x_d3_631gd_glycine_pt_relaxed_579",
|
| 3 |
+
"num_samples": 579,
|
| 4 |
+
"atom_counts": {
|
| 5 |
+
"min": 10,
|
| 6 |
+
"max": 10
|
| 7 |
+
},
|
| 8 |
+
"source": {
|
| 9 |
+
"transition1x_split": "test",
|
| 10 |
+
"transition1x_sample_id": 5,
|
| 11 |
+
"rxn": "rxn1961",
|
| 12 |
+
"formula": "C2H5NO2"
|
| 13 |
+
},
|
| 14 |
+
"method": "wB97X-D3",
|
| 15 |
+
"basis": "6-31G(d)",
|
| 16 |
+
"orca_version": "6.1.1",
|
| 17 |
+
"orca_freq_route": "! wB97X-D3 6-31G(d) TightSCF Grid5 FinalGrid6 Freq",
|
| 18 |
+
"orca_engrad_route": "! wB97X-D3 6-31G(d) TightSCF EnGrad",
|
| 19 |
+
"geometry_source": "GFN2-xTB constrained relaxation",
|
| 20 |
+
"scan_coordinates": {
|
| 21 |
+
"s": {
|
| 22 |
+
"description": "q_nh - q_oh reaction coordinate (\u00c5)"
|
| 23 |
+
},
|
| 24 |
+
"sigma": {
|
| 25 |
+
"description": "q_nh + q_oh donor-acceptor compression (\u00c5)"
|
| 26 |
+
},
|
| 27 |
+
"q_nh_angstrom": {
|
| 28 |
+
"atoms": [
|
| 29 |
+
4,
|
| 30 |
+
9
|
| 31 |
+
],
|
| 32 |
+
"description": "Relaxed N4-H9 distance"
|
| 33 |
+
},
|
| 34 |
+
"q_oh_angstrom": {
|
| 35 |
+
"atoms": [
|
| 36 |
+
3,
|
| 37 |
+
9
|
| 38 |
+
],
|
| 39 |
+
"description": "Relaxed O3-H9 distance"
|
| 40 |
+
}
|
| 41 |
+
},
|
| 42 |
+
"h5_datasets": [
|
| 43 |
+
"atomic_numbers",
|
| 44 |
+
"symbols",
|
| 45 |
+
"coordinates_bohr",
|
| 46 |
+
"energy_hartree",
|
| 47 |
+
"gradient_hartree_per_bohr",
|
| 48 |
+
"forces_hartree_per_bohr",
|
| 49 |
+
"hessian_hartree_per_bohr2",
|
| 50 |
+
"grid_id",
|
| 51 |
+
"i_s",
|
| 52 |
+
"i_sigma",
|
| 53 |
+
"s",
|
| 54 |
+
"sigma",
|
| 55 |
+
"q_nh_target_angstrom",
|
| 56 |
+
"q_oh_target_angstrom",
|
| 57 |
+
"q_nh_angstrom",
|
| 58 |
+
"q_oh_angstrom",
|
| 59 |
+
"xtb_energy_ev",
|
| 60 |
+
"xtb_converged"
|
| 61 |
+
]
|
| 62 |
+
}
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0000_s_-1.800_sig_3.533.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.800000 sigma=3.533333 q_nh=0.866667 q_oh=2.666667
|
| 3 |
+
C 1.5057607665 0.1090479949 -0.1004049055
|
| 4 |
+
O 0.2060905745 0.2662226618 -0.6417939878
|
| 5 |
+
C -0.7958943530 -0.1126273258 0.1914781846
|
| 6 |
+
O -0.6014107417 -0.5365284910 1.3009651738
|
| 7 |
+
N -1.9799894572 0.0799299902 -0.4604530658
|
| 8 |
+
H 1.5961222951 0.6782266626 0.8256645770
|
| 9 |
+
H 2.2074280142 0.4774645287 -0.8428234114
|
| 10 |
+
H 1.6975626921 -0.9435189878 0.1128397891
|
| 11 |
+
H -1.8872674622 0.4490248704 -1.3935499911
|
| 12 |
+
H -2.7800217429 -0.0774064960 -0.1666765435
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0001_s_-1.800_sig_3.604.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.800000 sigma=3.604167 q_nh=0.902083 q_oh=2.702083
|
| 3 |
+
C 1.5041889407 0.1090060308 -0.1004752904
|
| 4 |
+
O 0.2044496758 0.2660075884 -0.6413444664
|
| 5 |
+
C -0.7979822328 -0.1133572417 0.1930463830
|
| 6 |
+
O -0.5993984784 -0.5368635848 1.3020915717
|
| 7 |
+
N -1.9779119260 0.0816830674 -0.4647420659
|
| 8 |
+
H 1.5951059135 0.6781456569 0.8254637224
|
| 9 |
+
H 2.2056760168 0.4774254114 -0.8429881684
|
| 10 |
+
H 1.6964529776 -0.9433975682 0.1127367382
|
| 11 |
+
H -1.8813049436 0.4506448658 -1.3969581103
|
| 12 |
+
H -2.8164528594 -0.0771737403 -0.1725641368
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0002_s_-1.800_sig_3.675.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.800000 sigma=3.675000 q_nh=0.937500 q_oh=2.737500
|
| 3 |
+
C 1.5026947640 0.1089430798 -0.1004838739
|
| 4 |
+
O 0.2029443531 0.2658262204 -0.6409654564
|
| 5 |
+
C -0.7999821573 -0.1140312802 0.1944827234
|
| 6 |
+
O -0.5976093928 -0.5371561483 1.3030893974
|
| 7 |
+
N -1.9758866451 0.0833416461 -0.4687850500
|
| 8 |
+
H 1.5941975357 0.6780710799 0.8252979353
|
| 9 |
+
H 2.2040033569 0.4773533968 -0.8430608571
|
| 10 |
+
H 1.6954530067 -0.9432928608 0.1126516706
|
| 11 |
+
H -1.8756464190 0.4521825308 -1.4001951150
|
| 12 |
+
H -2.8528782372 -0.0768380694 -0.1787256909
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0003_s_-1.680_sig_3.392.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.391667 q_nh=0.855833 q_oh=2.535833
|
| 3 |
+
C 1.5180140918 0.1070637182 -0.0938325397
|
| 4 |
+
O 0.2266461886 0.2768178272 -0.6620675297
|
| 5 |
+
C -0.7747557773 -0.1013003723 0.1673455564
|
| 6 |
+
O -0.5902791499 -0.5260652883 1.2783978107
|
| 7 |
+
N -1.9859535954 0.0667210792 -0.4276873136
|
| 8 |
+
H 1.5854063291 0.6705615193 0.8398272822
|
| 9 |
+
H 2.2282151131 0.4746095882 -0.8295762784
|
| 10 |
+
H 1.6848320629 -0.9501817674 0.1262964326
|
| 11 |
+
H -1.9768544749 0.4325506892 -1.3657035610
|
| 12 |
+
H -2.7218318614 -0.1269911092 -0.0360121452
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0004_s_-1.680_sig_3.462.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.462500 q_nh=0.891250 q_oh=2.571250
|
| 3 |
+
C 1.5153437556 0.1086022806 -0.0981149821
|
| 4 |
+
O 0.2157706205 0.2669850395 -0.6418337990
|
| 5 |
+
C -0.7853029358 -0.1103788755 0.1874546563
|
| 6 |
+
O -0.6126466668 -0.5359360040 1.2980945513
|
| 7 |
+
N -1.9788638860 0.0707569678 -0.4362042357
|
| 8 |
+
H 1.6002168410 0.6766579654 0.8292076334
|
| 9 |
+
H 2.2196141530 0.4770952974 -0.8395179429
|
| 10 |
+
H 1.7019103166 -0.9447743439 0.1162686825
|
| 11 |
+
H -1.9592340472 0.4367109469 -1.3721803747
|
| 12 |
+
H -2.7604421410 -0.1212453678 -0.0533242735
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0005_s_-1.680_sig_3.533.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.533333 q_nh=0.926667 q_oh=2.606667
|
| 3 |
+
C 1.5132835961 0.1086099150 -0.0983773553
|
| 4 |
+
O 0.2136968530 0.2668102343 -0.6415386909
|
| 5 |
+
C -0.7873765894 -0.1112405789 0.1893988690
|
| 6 |
+
O -0.6094765180 -0.5363090798 1.2994857520
|
| 7 |
+
N -1.9769154574 0.0724225443 -0.4400863533
|
| 8 |
+
H 1.5985685477 0.6764732570 0.8289160742
|
| 9 |
+
H 2.2173555872 0.4771032351 -0.8398333699
|
| 10 |
+
H 1.7001141361 -0.9445953833 0.1161468148
|
| 11 |
+
H -1.9532400631 0.4382792813 -1.3755502890
|
| 12 |
+
H -2.7973162509 -0.1224460178 -0.0557949496
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0006_s_-1.680_sig_3.604.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.604167 q_nh=0.962083 q_oh=2.642083
|
| 3 |
+
C 1.5113251098 0.1085950826 -0.0985724945
|
| 4 |
+
O 0.2117966120 0.2666863675 -0.6413489119
|
| 5 |
+
C -0.7893205067 -0.1120225380 0.1911584986
|
| 6 |
+
O -0.6064735608 -0.5366076332 1.3006798083
|
| 7 |
+
N -1.9749856531 0.0740060716 -0.4437426708
|
| 8 |
+
H 1.5969712325 0.6762726295 0.8286915785
|
| 9 |
+
H 2.2152160945 0.4770816214 -0.8400493925
|
| 10 |
+
H 1.6983694131 -0.9444493301 0.1160774722
|
| 11 |
+
H -1.9475801921 0.4397645877 -1.3787542366
|
| 12 |
+
H -2.8341571863 -0.1235540729 -0.0585172934
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0007_s_-1.680_sig_3.675.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.675000 q_nh=0.997500 q_oh=2.677500
|
| 3 |
+
C 1.5094705035 0.1085576761 -0.0986997102
|
| 4 |
+
O 0.2100653166 0.2666119697 -0.6412578618
|
| 5 |
+
C -0.7911422083 -0.1127260952 0.1927356830
|
| 6 |
+
O -0.6036192447 -0.5368318668 1.3016792535
|
| 7 |
+
N -1.9730875495 0.0755062408 -0.4471811278
|
| 8 |
+
H 1.5954184929 0.6760574950 0.8285347932
|
| 9 |
+
H 2.2131978614 0.4770324228 -0.8401713260
|
| 10 |
+
H 1.6966699501 -0.9443383829 0.1160600194
|
| 11 |
+
H -1.9422518972 0.4411685447 -1.3817943697
|
| 12 |
+
H -2.8709719302 -0.1245777169 -0.0614658472
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0008_s_-1.680_sig_3.746.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.745833 q_nh=1.032917 q_oh=2.712917
|
| 3 |
+
C 1.5083779046 0.1085873656 -0.0988842025
|
| 4 |
+
O 0.2078610609 0.2650093342 -0.6384897198
|
| 5 |
+
C -0.7950536858 -0.1148272193 0.1969728474
|
| 6 |
+
O -0.6094760468 -0.5394860239 1.3069732821
|
| 7 |
+
N -1.9719674062 0.0768959166 -0.4501108372
|
| 8 |
+
H 1.6009950311 0.6780335073 0.8265819708
|
| 9 |
+
H 2.2086576029 0.4774009977 -0.8423137814
|
| 10 |
+
H 1.7025009724 -0.9434917487 0.1137643003
|
| 11 |
+
H -1.9347609704 0.4427785870 -1.3845802326
|
| 12 |
+
H -2.9105958777 -0.1237976013 -0.0685148128
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0009_s_-1.680_sig_3.817.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.680000 sigma=3.816667 q_nh=1.068333 q_oh=2.748333
|
| 3 |
+
C 1.5066021317 0.1085217407 -0.0989282196
|
| 4 |
+
O 0.2062571389 0.2649787115 -0.6384835383
|
| 5 |
+
C -0.7967530735 -0.1154531414 0.1983630458
|
| 6 |
+
O -0.6069904641 -0.5396552126 1.3077831146
|
| 7 |
+
N -1.9701003983 0.0782439805 -0.4531327525
|
| 8 |
+
H 1.5996300923 0.6779439057 0.8264469208
|
| 9 |
+
H 2.2068529289 0.4772858263 -0.8422734279
|
| 10 |
+
H 1.7010090669 -0.9434563038 0.1136727131
|
| 11 |
+
H -1.9298548003 0.4440032381 -1.3872215080
|
| 12 |
+
H -2.9473212191 -0.1245981649 -0.0720414088
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0010_s_-1.560_sig_3.321.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.320833 q_nh=0.880417 q_oh=2.440417
|
| 3 |
+
C 1.5274832315 0.1059288655 -0.0896718805
|
| 4 |
+
O 0.2385127048 0.2779921108 -0.6627226211
|
| 5 |
+
C -0.7641949186 -0.0975901359 0.1597560175
|
| 6 |
+
O -0.6028177642 -0.5246724866 1.2730785895
|
| 7 |
+
N -1.9821447766 0.0610160811 -0.4115331164
|
| 8 |
+
H 1.5947739224 0.6695949379 0.8438691202
|
| 9 |
+
H 2.2395909210 0.4728241921 -0.8235843504
|
| 10 |
+
H 1.6941503483 -0.9514479267 0.1297652860
|
| 11 |
+
H -2.0431745782 0.4216143691 -1.3473744825
|
| 12 |
+
H -2.6900749323 -0.1637604450 0.0611654245
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0011_s_-1.560_sig_3.392.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.391667 q_nh=0.915833 q_oh=2.475833
|
| 3 |
+
C 1.5252878346 0.1059135016 -0.0899214396
|
| 4 |
+
O 0.2359718602 0.2775622811 -0.6620077830
|
| 5 |
+
C -0.7666673142 -0.0987858640 0.1624456517
|
| 6 |
+
O -0.5993234447 -0.5253883186 1.2753461043
|
| 7 |
+
N -1.9805947105 0.0628126406 -0.4157087913
|
| 8 |
+
H 1.5932462431 0.6695791267 0.8436898616
|
| 9 |
+
H 2.2363834775 0.4731057665 -0.8246772783
|
| 10 |
+
H 1.6925644864 -0.9514492019 0.1296139975
|
| 11 |
+
H -2.0368642405 0.4234892992 -1.3514407584
|
| 12 |
+
H -2.7274895169 -0.1663356792 0.0621927480
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0012_s_-1.560_sig_3.462.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.462500 q_nh=0.951250 q_oh=2.511250
|
| 3 |
+
C 1.5232286417 0.1058967191 -0.0901508817
|
| 4 |
+
O 0.2336027189 0.2771792649 -0.6613814306
|
| 5 |
+
C -0.7690304594 -0.0999107314 0.1649704860
|
| 6 |
+
O -0.5961449547 -0.5260587964 1.2774609776
|
| 7 |
+
N -1.9790419155 0.0645218548 -0.4196608869
|
| 8 |
+
H 1.5918156802 0.6695595665 0.8435425816
|
| 9 |
+
H 2.2333938502 0.4733669228 -0.8256919916
|
| 10 |
+
H 1.6910814389 -0.9514625420 0.1294895209
|
| 11 |
+
H -2.0308186896 0.4252730582 -1.3553037426
|
| 12 |
+
H -2.7649111269 -0.1687834931 0.0628893615
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0013_s_-1.560_sig_3.533.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.533333 q_nh=0.986667 q_oh=2.546667
|
| 3 |
+
C 1.5232801698 0.1081716398 -0.0960103815
|
| 4 |
+
O 0.2229541612 0.2662253194 -0.6394378375
|
| 5 |
+
C -0.7814197173 -0.1102404474 0.1873913784
|
| 6 |
+
O -0.6267570193 -0.5379585584 1.3002858468
|
| 7 |
+
N -1.9745246649 0.0677518002 -0.4252673143
|
| 8 |
+
H 1.6111847749 0.6766135496 0.8307109742
|
| 9 |
+
H 2.2272362001 0.4767326593 -0.8376107276
|
| 10 |
+
H 1.7132971132 -0.9446237141 0.1178215330
|
| 11 |
+
H -2.0098933968 0.4290992264 -1.3603371104
|
| 12 |
+
H -2.8106289983 -0.1629842532 0.0450533741
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0014_s_-1.560_sig_3.604.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.604167 q_nh=1.022083 q_oh=2.582083
|
| 3 |
+
C 1.5210002216 0.1081896056 -0.0963337659
|
| 4 |
+
O 0.2207500004 0.2660961655 -0.6392780894
|
| 5 |
+
C -0.7833137321 -0.1111728968 0.1895710682
|
| 6 |
+
O -0.6232669978 -0.5384148234 1.3019259832
|
| 7 |
+
N -1.9726030735 0.0692737588 -0.4284222635
|
| 8 |
+
H 1.6092567694 0.6764939470 0.8303727998
|
| 9 |
+
H 2.2247711033 0.4767365197 -0.8379545558
|
| 10 |
+
H 1.7112049246 -0.9444904369 0.1176009336
|
| 11 |
+
H -2.0043688501 0.4304543647 -1.3633782409
|
| 12 |
+
H -2.8476176845 -0.1651863119 0.0448982027
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0015_s_-1.560_sig_3.675.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.675000 q_nh=1.057500 q_oh=2.617500
|
| 3 |
+
C 1.5188228860 0.1081854910 -0.0965907286
|
| 4 |
+
O 0.2187059041 0.2659988886 -0.6391883374
|
| 5 |
+
C -0.7851034166 -0.1120385291 0.1915837266
|
| 6 |
+
O -0.6199794483 -0.5388086828 1.3033901041
|
| 7 |
+
N -1.9707041693 0.0707213550 -0.4313897365
|
| 8 |
+
H 1.6074310949 0.6763770401 0.8300831106
|
| 9 |
+
H 2.2224024267 0.4767153847 -0.8382201857
|
| 10 |
+
H 1.7092218604 -0.9443820432 0.1174121228
|
| 11 |
+
H -1.9991295496 0.4317361855 -1.3662561106
|
| 12 |
+
H -2.8845912113 -0.1672892719 0.0444964866
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0016_s_-1.560_sig_3.746.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.745833 q_nh=1.092917 q_oh=2.652917
|
| 3 |
+
C 1.5167462610 0.1081594528 -0.0967815244
|
| 4 |
+
O 0.2168148531 0.2659324319 -0.6391624739
|
| 5 |
+
C -0.7867967233 -0.1128392295 0.1934340772
|
| 6 |
+
O -0.6168781815 -0.5391403879 1.3046806396
|
| 7 |
+
N -1.9688407763 0.0720920858 -0.4341761391
|
| 8 |
+
H 1.6057045484 0.6762633168 0.8298392496
|
| 9 |
+
H 2.2201285476 0.4766693862 -0.8384092900
|
| 10 |
+
H 1.7073434180 -0.9442973953 0.1172527805
|
| 11 |
+
H -1.9941629299 0.4329480510 -1.3689759029
|
| 12 |
+
H -2.9215567558 -0.1693004529 0.0438706094
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0017_s_-1.560_sig_3.817.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.816667 q_nh=1.128333 q_oh=2.688333
|
| 3 |
+
C 1.5147714626 0.1081116443 -0.0969061190
|
| 4 |
+
O 0.2150710428 0.2658940282 -0.6391911349
|
| 5 |
+
C -0.7884023228 -0.1135775033 0.1951280108
|
| 6 |
+
O -0.6139572050 -0.5394125078 1.3058037181
|
| 7 |
+
N -1.9670274841 0.0733842088 -0.4367873335
|
| 8 |
+
H 1.6040806180 0.6761558992 0.8296371502
|
| 9 |
+
H 2.2179472028 0.4765995404 -0.8385262675
|
| 10 |
+
H 1.7055723351 -0.9442353422 0.1171182334
|
| 11 |
+
H -1.9894549441 0.4340936356 -1.3715437119
|
| 12 |
+
H -2.9585255283 -0.1712261246 0.0430391812
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0018_s_-1.560_sig_3.887.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.560000 sigma=3.887500 q_nh=1.163750 q_oh=2.723750
|
| 3 |
+
C 1.5129025339 0.1080423754 -0.0969646270
|
| 4 |
+
O 0.2134716470 0.2658795757 -0.6392619079
|
| 5 |
+
C -0.7899271490 -0.1142578072 0.1966764117
|
| 6 |
+
O -0.6112142177 -0.5396295323 1.3067693783
|
| 7 |
+
N -1.9652747547 0.0745974073 -0.4392306294
|
| 8 |
+
H 1.6025605661 0.6760594111 0.8294726118
|
| 9 |
+
H 2.2158538223 0.4765086934 -0.8385803925
|
| 10 |
+
H 1.7039099914 -0.9441958420 0.1170027837
|
| 11 |
+
H -1.9849941322 0.4351772319 -1.3739676149
|
| 12 |
+
H -2.9955059831 -0.1730706210 0.0420158827
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0019_s_-1.440_sig_3.179.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.179167 q_nh=0.869583 q_oh=2.309583
|
| 3 |
+
C 1.5414140615 0.1049127743 -0.0852521553
|
| 4 |
+
O 0.2548013065 0.2794851194 -0.6634556928
|
| 5 |
+
C -0.7511314621 -0.0921527259 0.1481270679
|
| 6 |
+
O -0.6213517812 -0.5220786811 1.2637014698
|
| 7 |
+
N -1.9786336945 0.0554949452 -0.3959073702
|
| 8 |
+
H 1.6068760435 0.6689757166 0.8480251772
|
| 9 |
+
H 2.2569733680 0.4709590084 -0.8167411413
|
| 10 |
+
H 1.7064145789 -0.9528108421 0.1332399696
|
| 11 |
+
H -2.1110993587 0.4092855655 -1.3256286308
|
| 12 |
+
H -2.6140376561 -0.1921025565 0.1436595355
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0020_s_-1.440_sig_3.250.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.250000 q_nh=0.905000 q_oh=2.345000
|
| 3 |
+
C 1.5387217984 0.1048962738 -0.0855648804
|
| 4 |
+
O 0.2517473576 0.2789946767 -0.6626851501
|
| 5 |
+
C -0.7538065805 -0.0935750220 0.1513615686
|
| 6 |
+
O -0.6167555944 -0.5229997460 1.2666413629
|
| 7 |
+
N -1.9772526972 0.0573371522 -0.4001139139
|
| 8 |
+
H 1.6048847081 0.6689514836 0.8477899982
|
| 9 |
+
H 2.2529470794 0.4712920743 -0.8180469397
|
| 10 |
+
H 1.7043305078 -0.9528096890 0.1330340556
|
| 11 |
+
H -2.1043396717 0.4113032101 -1.3300735044
|
| 12 |
+
H -2.6515269815 -0.1959336975 0.1478213586
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0021_s_-1.440_sig_3.321.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
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|
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|
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.320833 q_nh=0.940417 q_oh=2.380417
|
| 3 |
+
C 1.5361885914 0.1048817561 -0.0858624800
|
| 4 |
+
O 0.2488595417 0.2785342775 -0.6619660550
|
| 5 |
+
C -0.7563979878 -0.0949245499 0.1544185964
|
| 6 |
+
O -0.6125378242 -0.5238612420 1.2693800177
|
| 7 |
+
N -1.9758819708 0.0590925902 -0.4041028526
|
| 8 |
+
H 1.6030697096 0.6689341434 0.8475717955
|
| 9 |
+
H 2.2492142465 0.4716012579 -0.8192638972
|
| 10 |
+
H 1.7024366691 -0.9528088795 0.1328422303
|
| 11 |
+
H -2.0978660246 0.4132301117 -1.3343102231
|
| 12 |
+
H -2.6890482594 -0.1996270678 0.1516322288
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0022_s_-1.440_sig_3.392.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.391667 q_nh=0.975833 q_oh=2.415833
|
| 3 |
+
C 1.5338019789 0.1048685462 -0.0861449578
|
| 4 |
+
O 0.2461340383 0.2781088587 -0.6613099053
|
| 5 |
+
C -0.7589027159 -0.0962051326 0.1573096092
|
| 6 |
+
O -0.6086654567 -0.5246640014 1.2719248236
|
| 7 |
+
N -1.9745160525 0.0607607969 -0.4078753815
|
| 8 |
+
H 1.6013987942 0.6689198917 0.8473731565
|
| 9 |
+
H 2.2457427933 0.4718891092 -0.8203995347
|
| 10 |
+
H 1.7006975614 -0.9528110402 0.1326673628
|
| 11 |
+
H -2.0916485203 0.4150657134 -1.3383349513
|
| 12 |
+
H -2.7265970354 -0.2031905225 0.1551118023
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0023_s_-1.440_sig_3.462.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.462500 q_nh=1.011250 q_oh=2.451250
|
| 3 |
+
C 1.5315512316 0.1048556321 -0.0864112377
|
| 4 |
+
O 0.2435670167 0.2777230742 -0.6607276055
|
| 5 |
+
C -0.7613186392 -0.0974179036 0.1600388910
|
| 6 |
+
O -0.6051078427 -0.5254112568 1.2742890149
|
| 7 |
+
N -1.9731556745 0.0623433829 -0.4114384271
|
| 8 |
+
H 1.5998502642 0.6689057666 0.8471974404
|
| 9 |
+
H 2.2425061390 0.4721566081 -0.8214579654
|
| 10 |
+
H 1.6990888752 -0.9528187071 0.1325126127
|
| 11 |
+
H -2.0856722006 0.4168114020 -1.3421505095
|
| 12 |
+
H -2.7641663575 -0.2066322597 0.1582814687
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0024_s_-1.440_sig_3.533.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.533333 q_nh=1.046667 q_oh=2.486667
|
| 3 |
+
C 1.5294275238 0.1048422727 -0.0866605940
|
| 4 |
+
O 0.2411526011 0.2773787985 -0.6602236144
|
| 5 |
+
C -0.7636470364 -0.0985649234 0.1626124300
|
| 6 |
+
O -0.6018389535 -0.5261066076 1.2764853643
|
| 7 |
+
N -1.9718042109 0.0638432665 -0.4148018422
|
| 8 |
+
H 1.5984108017 0.6688898171 0.8470470606
|
| 9 |
+
H 2.2394850578 0.4724047543 -0.8224432016
|
| 10 |
+
H 1.6975956173 -0.9528335551 0.1323802999
|
| 11 |
+
H -2.0799284634 0.4184699928 -1.3457638546
|
| 12 |
+
H -2.8017506564 -0.2099593714 0.1611600594
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0025_s_-1.440_sig_3.604.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.604167 q_nh=1.082083 q_oh=2.522083
|
| 3 |
+
C 1.5295656125 0.1074860978 -0.0934542369
|
| 4 |
+
O 0.2307741936 0.2676593866 -0.6414660680
|
| 5 |
+
C -0.7760572114 -0.1079745286 0.1828870495
|
| 6 |
+
O -0.6301890208 -0.5369673867 1.2965116460
|
| 7 |
+
N -1.9701016365 0.0667737688 -0.4174594481
|
| 8 |
+
H 1.6163667255 0.6744243126 0.8342380601
|
| 9 |
+
H 2.2371576890 0.4752578982 -0.8322296716
|
| 10 |
+
H 1.7183238105 -0.9452006854 0.1218285512
|
| 11 |
+
H -2.0568616763 0.4215347751 -1.3497639651
|
| 12 |
+
H -2.8511960317 -0.2066278594 0.1480744493
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0026_s_-1.440_sig_3.675.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.675000 q_nh=1.117500 q_oh=2.557500
|
| 3 |
+
C 1.5271735846 0.1053203494 -0.0882302951
|
| 4 |
+
O 0.2359771847 0.2751919384 -0.6557193576
|
| 5 |
+
C -0.7698560968 -0.1018976683 0.1700845410
|
| 6 |
+
O -0.5995682541 -0.5282561469 1.2817958761
|
| 7 |
+
N -1.9695963799 0.0666449382 -0.4206575620
|
| 8 |
+
H 1.5967433915 0.6693590413 0.8451616893
|
| 9 |
+
H 2.2360999179 0.4737190710 -0.8263345230
|
| 10 |
+
H 1.6963127080 -0.9520114883 0.1309468528
|
| 11 |
+
H -2.0667418092 0.4218411913 -1.3528055235
|
| 12 |
+
H -2.8787909570 -0.2156814664 0.1645460429
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0027_s_-1.440_sig_3.746.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.745833 q_nh=1.152917 q_oh=2.592917
|
| 3 |
+
C 1.5255003014 0.1053498937 -0.0885358302
|
| 4 |
+
O 0.2340073191 0.2749080529 -0.6552871631
|
| 5 |
+
C -0.7718906510 -0.1029214645 0.1723888497
|
| 6 |
+
O -0.5971800621 -0.5288988028 1.2837326726
|
| 7 |
+
N -1.9682093949 0.0679156163 -0.4234073129
|
| 8 |
+
H 1.5954140904 0.6693186406 0.8449802530
|
| 9 |
+
H 2.2337608215 0.4739826369 -0.8272721193
|
| 10 |
+
H 1.6949510809 -0.9519891173 0.1308273702
|
| 11 |
+
H -2.0615837641 0.4232469172 -1.3558466332
|
| 12 |
+
H -2.9164054554 -0.2186609425 0.1665205686
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0028_s_-1.440_sig_3.817.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.816667 q_nh=1.188333 q_oh=2.628333
|
| 3 |
+
C 1.5239212760 0.1053817781 -0.0888353779
|
| 4 |
+
O 0.2321572300 0.2746625980 -0.6549288306
|
| 5 |
+
C -0.7738284277 -0.1038943070 0.1745778352
|
| 6 |
+
O -0.5950175309 -0.5295118993 1.2855651817
|
| 7 |
+
N -1.9668253627 0.0691127001 -0.4259832443
|
| 8 |
+
H 1.5941660039 0.6692685462 0.8448185715
|
| 9 |
+
H 2.2315869784 0.4742319550 -0.8281552112
|
| 10 |
+
H 1.6936732868 -0.9519672604 0.1307317460
|
| 11 |
+
H -2.0566586325 0.4245738813 -1.3587090411
|
| 12 |
+
H -2.9540183299 -0.2215403051 0.1682447984
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0029_s_-1.440_sig_3.887.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.887500 q_nh=1.223750 q_oh=2.663750
|
| 3 |
+
C 1.5215047829 0.1075019103 -0.0945510733
|
| 4 |
+
O 0.2230295471 0.2670211593 -0.6406391050
|
| 5 |
+
C -0.7827458577 -0.1117485721 0.1916943094
|
| 6 |
+
O -0.6179125740 -0.5389186817 1.3031772334
|
| 7 |
+
N -1.9629919685 0.0720439139 -0.4270195540
|
| 8 |
+
H 1.6089918508 0.6742919537 0.8328528671
|
| 9 |
+
H 2.2275519261 0.4754855581 -0.8341224342
|
| 10 |
+
H 1.7104376251 -0.9448751321 0.1207061204
|
| 11 |
+
H -2.0374840566 0.4260774327 -1.3603113868
|
| 12 |
+
H -2.9998154765 -0.2183741699 0.1545459430
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0030_s_-1.440_sig_3.958.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
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|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=3.958333 q_nh=1.259167 q_oh=2.699167
|
| 3 |
+
C 1.5197034141 0.1074577459 -0.0946781937
|
| 4 |
+
O 0.2214372195 0.2669505527 -0.6406155079
|
| 5 |
+
C -0.7841750360 -0.1125316561 0.1934937271
|
| 6 |
+
O -0.6152431877 -0.5392577437 1.3044358097
|
| 7 |
+
N -1.9613234555 0.0731602240 -0.4290252839
|
| 8 |
+
H 1.6073970897 0.6742616760 0.8326089507
|
| 9 |
+
H 2.2253497149 0.4754809614 -0.8344141470
|
| 10 |
+
H 1.7087179283 -0.9448395487 0.1204965703
|
| 11 |
+
H -2.0332226381 0.4270636794 -1.3625753069
|
| 12 |
+
H -3.0369593056 -0.2211076087 0.1557094583
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0031_s_-1.440_sig_4.029.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
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|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.440000 sigma=4.029167 q_nh=1.294583 q_oh=2.734583
|
| 3 |
+
C 1.5179893005 0.1073963189 -0.0947509606
|
| 4 |
+
O 0.2199673579 0.2669081817 -0.6406425775
|
| 5 |
+
C -0.7855211529 -0.1132575283 0.1951508780
|
| 6 |
+
O -0.6127312128 -0.5395451064 1.3055485709
|
| 7 |
+
N -1.9597161422 0.0741952271 -0.4308911526
|
| 8 |
+
H 1.6059027227 0.6742383652 0.8323978878
|
| 9 |
+
H 2.2232226876 0.4754570604 -0.8346496246
|
| 10 |
+
H 1.7070994343 -0.9448206548 0.1203063947
|
| 11 |
+
H -2.0291572795 0.4279978556 -1.3647022638
|
| 12 |
+
H -3.0741148700 -0.2237675235 0.1567139366
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0032_s_-1.320_sig_3.037.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.320000 sigma=3.037500 q_nh=0.858750 q_oh=2.178750
|
| 3 |
+
C 1.5549445630 0.1036923512 -0.0803202974
|
| 4 |
+
O 0.2745570467 0.2833349148 -0.6691214929
|
| 5 |
+
C -0.7332646822 -0.0849802066 0.1329387428
|
| 6 |
+
O -0.6399001804 -0.5180135863 1.2510342186
|
| 7 |
+
N -1.9701946724 0.0512969207 -0.3832091826
|
| 8 |
+
H 1.6172623372 0.6675637302 0.8528649844
|
| 9 |
+
H 2.2738604612 0.4679231359 -0.8069359147
|
| 10 |
+
H 1.7162408991 -0.9542732913 0.1375033676
|
| 11 |
+
H -2.1796423014 0.3952094391 -1.2998303014
|
| 12 |
+
H -2.5302326123 -0.2143050103 0.2111515520
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0033_s_-1.320_sig_3.108.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.320000 sigma=3.108333 q_nh=0.894167 q_oh=2.214167
|
| 3 |
+
C 1.5523370428 0.1036704815 -0.0806479904
|
| 4 |
+
O 0.2702207573 0.2821970289 -0.6670807150
|
| 5 |
+
C -0.7374565356 -0.0869004822 0.1371332979
|
| 6 |
+
O -0.6342883340 -0.5194557773 1.2553129940
|
| 7 |
+
N -1.9702720123 0.0532104342 -0.3876943216
|
| 8 |
+
H 1.6149932078 0.6680552244 0.8527731698
|
| 9 |
+
H 2.2691236109 0.4688825101 -0.8098161734
|
| 10 |
+
H 1.7140912379 -0.9547673024 0.1370698503
|
| 11 |
+
H -2.1703171191 0.3980288765 -1.3059086150
|
| 12 |
+
H -2.5678369477 -0.2195233524 0.2189904926
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0034_s_-1.320_sig_3.179.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.320000 sigma=3.179167 q_nh=0.929583 q_oh=2.249583
|
| 3 |
+
C 1.5491884578 0.1036321235 -0.0809612690
|
| 4 |
+
O 0.2665234473 0.2815705815 -0.6660995429
|
| 5 |
+
C -0.7404360010 -0.0885109036 0.1407797810
|
| 6 |
+
O -0.6288554484 -0.5206520488 1.2590618103
|
| 7 |
+
N -1.9692275780 0.0551108885 -0.3920571067
|
| 8 |
+
H 1.6129981976 0.6680814308 0.8525638326
|
| 9 |
+
H 2.2645565416 0.4692317860 -0.8112378972
|
| 10 |
+
H 1.7120145130 -0.9548087297 0.1368384525
|
| 11 |
+
H -2.1636059612 0.4002799440 -1.3109729150
|
| 12 |
+
H -2.6050272312 -0.2243769954 0.2258186872
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0035_s_-1.320_sig_3.250.xyz
ADDED
|
@@ -0,0 +1,12 @@
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.320000 sigma=3.250000 q_nh=0.965000 q_oh=2.285000
|
| 3 |
+
C 1.5472656339 0.1037640254 -0.0815644798
|
| 4 |
+
O 0.2629232135 0.2802962652 -0.6635686651
|
| 5 |
+
C -0.7450077098 -0.0903158024 0.1446719818
|
| 6 |
+
O -0.6249740088 -0.5218000820 1.2622503661
|
| 7 |
+
N -1.9698511320 0.0567087160 -0.3957365108
|
| 8 |
+
H 1.6120243014 0.6683275320 0.8519775015
|
| 9 |
+
H 2.2618173522 0.4699858246 -0.8135190525
|
| 10 |
+
H 1.7112426361 -0.9546632558 0.1363309375
|
| 11 |
+
H -2.1553896872 0.4028822549 -1.3166530772
|
| 12 |
+
H -2.6438795779 -0.2293151456 0.2328340922
|
orca_wb97x_d3_631gd_glycine_pt_relaxed_579/xyz/grid_0036_s_-1.320_sig_3.321.xyz
ADDED
|
@@ -0,0 +1,12 @@
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
10
|
| 2 |
+
glycine_pt relaxed xtb=GFN2-xTB s=-1.320000 sigma=3.320833 q_nh=1.000417 q_oh=2.320417
|
| 3 |
+
C 1.5443658033 0.1037158960 -0.0818203326
|
| 4 |
+
O 0.2598439116 0.2799257039 -0.6631101565
|
| 5 |
+
C -0.7473926222 -0.0917001294 0.1478336109
|
| 6 |
+
O -0.6202892906 -0.5227632088 1.2653526561
|
| 7 |
+
N -1.9683807643 0.0584255311 -0.3995936136
|
| 8 |
+
H 1.6101473233 0.6682818709 0.8518071493
|
| 9 |
+
H 2.2576418767 0.4701875588 -0.8145280338
|
| 10 |
+
H 1.7092454775 -0.9546710340 0.1361681144
|
| 11 |
+
H -2.1494781793 0.4047326321 -1.3207982950
|
| 12 |
+
H -2.6810920469 -0.2338254436 0.2387366254
|