abhinadduri commited on
Commit
37db52b
·
verified ·
1 Parent(s): f325283

Add files using upload-large-folder tool

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. fewshot/hepg2/checkpoints/best.ckpt +3 -0
  2. fewshot/hepg2/checkpoints/last.ckpt +3 -0
  3. fewshot/hepg2/eval_best.ckpt/adata_pred.h5ad +3 -0
  4. fewshot/hepg2/eval_best.ckpt/adata_real.h5ad +3 -0
  5. fewshot/hepg2/eval_best.ckpt/hepg2_pred_de.csv +3 -0
  6. fewshot/hepg2/eval_best.ckpt/hepg2_real_de.csv +3 -0
  7. fewshot/hepg2/eval_last.ckpt/adata_pred.h5ad +3 -0
  8. fewshot/hepg2/eval_last.ckpt/adata_real.h5ad +3 -0
  9. fewshot/hepg2/eval_last.ckpt/hepg2_pred_de.csv +3 -0
  10. fewshot/hepg2/eval_last.ckpt/hepg2_real_de.csv +3 -0
  11. fewshot/hepg2/pert_onehot_map.pt +3 -0
  12. fewshot/jurkat/checkpoints/best.ckpt +3 -0
  13. fewshot/jurkat/checkpoints/final.ckpt +3 -0
  14. fewshot/jurkat/checkpoints/last.ckpt +3 -0
  15. fewshot/jurkat/eval_best.ckpt/jurkat_pred_de.csv +3 -0
  16. fewshot/jurkat/eval_best.ckpt/jurkat_real_de.csv +3 -0
  17. fewshot/jurkat/eval_last.ckpt/jurkat_pred_de.csv +3 -0
  18. fewshot/jurkat/eval_last.ckpt/jurkat_real_de.csv +3 -0
  19. fewshot/jurkat/eval_last.ckpt/jurkat_results.csv +3 -0
  20. fewshot/k562/batch_onehot_map.pkl +3 -0
  21. fewshot/k562/checkpoints/best.ckpt +3 -0
  22. fewshot/k562/checkpoints/final.ckpt +3 -0
  23. fewshot/k562/checkpoints/last.ckpt +3 -0
  24. fewshot/k562/eval_best.ckpt/adata_pred.h5ad +3 -0
  25. fewshot/k562/eval_best.ckpt/adata_real.h5ad +3 -0
  26. fewshot/k562/eval_best.ckpt/k562_pred_de.csv +3 -0
  27. fewshot/k562/eval_best.ckpt/k562_real_de.csv +3 -0
  28. fewshot/k562/eval_last.ckpt/adata_pred.h5ad +3 -0
  29. fewshot/k562/eval_last.ckpt/adata_real.h5ad +3 -0
  30. fewshot/k562/eval_last.ckpt/k562_pred_de.csv +3 -0
  31. fewshot/k562/eval_last.ckpt/k562_real_de.csv +3 -0
  32. fewshot/rpe1/batch_onehot_map.pkl +3 -0
  33. fewshot/rpe1/checkpoints/best.ckpt +3 -0
  34. fewshot/rpe1/checkpoints/final.ckpt +3 -0
  35. fewshot/rpe1/checkpoints/last.ckpt +3 -0
  36. fewshot/rpe1/eval_best.ckpt/adata_pred.h5ad +3 -0
  37. fewshot/rpe1/eval_best.ckpt/adata_real.h5ad +3 -0
  38. fewshot/rpe1/eval_best.ckpt/rpe1_pred_de.csv +3 -0
  39. fewshot/rpe1/eval_best.ckpt/rpe1_real_de.csv +3 -0
  40. fewshot/rpe1/eval_last.ckpt/adata_real.h5ad +3 -0
  41. fewshot/rpe1/eval_last.ckpt/rpe1_pred_de.csv +3 -0
  42. fewshot/rpe1/eval_last.ckpt/rpe1_real_de.csv +3 -0
  43. zeroshot/hepg2/checkpoints/best.ckpt +3 -0
  44. zeroshot/hepg2/checkpoints/final.ckpt +3 -0
  45. zeroshot/hepg2/checkpoints/last.ckpt +3 -0
  46. zeroshot/hepg2/eval_best.ckpt/adata_pred.h5ad +3 -0
  47. zeroshot/hepg2/eval_best.ckpt/adata_real.h5ad +3 -0
  48. zeroshot/hepg2/eval_best.ckpt/hepg2_pred_de.csv +3 -0
  49. zeroshot/hepg2/eval_best.ckpt/hepg2_real_de.csv +3 -0
  50. zeroshot/hepg2/eval_last.ckpt/adata_pred.h5ad +3 -0
fewshot/hepg2/checkpoints/best.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:865ef2b03757414801f769227335ce793c02d9ec526d7f7692dae8a8f76ba873
3
+ size 471699103
fewshot/hepg2/checkpoints/last.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:865ef2b03757414801f769227335ce793c02d9ec526d7f7692dae8a8f76ba873
3
+ size 471699103
fewshot/hepg2/eval_best.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b2079326709661b683d0e8cf2d70c6e473b39aaf6fbebf5fea7f936c43820a64
3
+ size 572722220
fewshot/hepg2/eval_best.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8a1259cc15331448f01ed64aa8b346dbb7aa4892c6f3aca5c6a4ade728604d81
3
+ size 572722220
fewshot/hepg2/eval_best.ckpt/hepg2_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e2503e4ed1c288a0c8af955ea00ceea7b3ddf281cd223d3cc593d71ca98967ee
3
+ size 218473452
fewshot/hepg2/eval_best.ckpt/hepg2_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3782766558cf7d2f8dcdfb160baf114116fd87d25e8caaa7343528267bc0016f
3
+ size 234027350
fewshot/hepg2/eval_last.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b2079326709661b683d0e8cf2d70c6e473b39aaf6fbebf5fea7f936c43820a64
3
+ size 572722220
fewshot/hepg2/eval_last.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8a1259cc15331448f01ed64aa8b346dbb7aa4892c6f3aca5c6a4ade728604d81
3
+ size 572722220
fewshot/hepg2/eval_last.ckpt/hepg2_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e2503e4ed1c288a0c8af955ea00ceea7b3ddf281cd223d3cc593d71ca98967ee
3
+ size 218473452
fewshot/hepg2/eval_last.ckpt/hepg2_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3782766558cf7d2f8dcdfb160baf114116fd87d25e8caaa7343528267bc0016f
3
+ size 234027350
fewshot/hepg2/pert_onehot_map.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f5621cab243a5135014af3867f63f8bf75cff19aee06d0f29a1bdecd2dbf47d0
3
+ size 16746593
fewshot/jurkat/checkpoints/best.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fbfaec4a4cb550599efc416274b3b7d5af3e763f4cb65ca9ab421a9a4cced9f5
3
+ size 471699103
fewshot/jurkat/checkpoints/final.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:10cfcf01aff649e7f868ed6cf70e763cfbae91d7ba94e2887324a58fbcf5ede5
3
+ size 471695263
fewshot/jurkat/checkpoints/last.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e4f43a8e0fe0c108bcb1b1781653189c2388d10f51c0fd6f8bda2172b62d245c
3
+ size 471699103
fewshot/jurkat/eval_best.ckpt/jurkat_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1f815369d7ea547b129e86601213e41a2bab75e3d66b631b8e28b7913a51a512
3
+ size 245178927
fewshot/jurkat/eval_best.ckpt/jurkat_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d6c2fcee1e35295fd8e0ffb376b5168fa2f41acfe97941da4f328a181ddfca48
3
+ size 268688957
fewshot/jurkat/eval_last.ckpt/jurkat_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f6b4c4848c4a9026cdc244c2c30cbd7d2dc64d094acf1b944c692562777adbc7
3
+ size 249716480
fewshot/jurkat/eval_last.ckpt/jurkat_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d6c2fcee1e35295fd8e0ffb376b5168fa2f41acfe97941da4f328a181ddfca48
3
+ size 268688957
fewshot/jurkat/eval_last.ckpt/jurkat_results.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ca472d8bd41a8423c5e54e0668886c11472f787c58ed3fa7a60e6a17e707fafe
3
+ size 424719
fewshot/k562/batch_onehot_map.pkl ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3460dc1f8a7795e5316d7210f59662fe45e266e5775b6bf93cf8cb81e11b3938
3
+ size 721431
fewshot/k562/checkpoints/best.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c2958735362cbef308ba1de407ba02c1e771c729a96e106cbde75ed3ddde4f41
3
+ size 471699103
fewshot/k562/checkpoints/final.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:121ff54db0e6f9f53b2777bbf45139757367ed827a111824213e6bf3777b2618
3
+ size 471695263
fewshot/k562/checkpoints/last.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6077de2eb4303d4abf4f9eb84252a66735c1490bd57b6212871dca2500f9df70
3
+ size 471699103
fewshot/k562/eval_best.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:572779bd21d8ae2d1c19f11d0c96b62103f415000603f205f57d635921764237
3
+ size 1091179586
fewshot/k562/eval_best.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3d079939c1da1b5addde17d9d8dd816aabe5d287da5b281b26deec3af6bb90f4
3
+ size 1091179586
fewshot/k562/eval_best.ckpt/k562_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:28d828bc52efe416c7d5a89fab57ac38568c7c9084e796e122933fe0cf829d58
3
+ size 218778037
fewshot/k562/eval_best.ckpt/k562_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e2419a226a314d3d41283779118d2a260829719c5d333c1bfabc05044b77bf7e
3
+ size 240422885
fewshot/k562/eval_last.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1042f1ba9b914ae91ca56b0cb419aa4521cf3e146894fa3cf48427eb91780334
3
+ size 1091179586
fewshot/k562/eval_last.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3d079939c1da1b5addde17d9d8dd816aabe5d287da5b281b26deec3af6bb90f4
3
+ size 1091179586
fewshot/k562/eval_last.ckpt/k562_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ec507862831971f01399d1056014c9e96eb0fbdf5a83995a0a0d0c30666d3eb2
3
+ size 220042094
fewshot/k562/eval_last.ckpt/k562_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e2419a226a314d3d41283779118d2a260829719c5d333c1bfabc05044b77bf7e
3
+ size 240422885
fewshot/rpe1/batch_onehot_map.pkl ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b3810b260ff3a893571db2ada4a0b6bfc892f28e0a2f8df67126a567044690ae
3
+ size 721431
fewshot/rpe1/checkpoints/best.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1ee7162de3449ad133b23cb2b72f664529c37acc367929e2d3473fb5033f1aa4
3
+ size 471699103
fewshot/rpe1/checkpoints/final.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:02603032590f51fbcca890e9f201ad07f1c457dbc72580baa97e5aae9b5a3814
3
+ size 471695263
fewshot/rpe1/checkpoints/last.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:53017747fbff64e95346c4c29f9b26d76ca0e1fb87bd434967be13a0872f4f47
3
+ size 471699103
fewshot/rpe1/eval_best.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e1935bde9b0f91bdad7b93a70c18687601f2b61e0f5a6800cdfa2ac3060d7c1d
3
+ size 1054319856
fewshot/rpe1/eval_best.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1e8a0d3aaab6d35a863784ccc91b001ee1922179e9cd7db20ee71219be3fe571
3
+ size 1054319856
fewshot/rpe1/eval_best.ckpt/rpe1_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c5ab6ab797426d6ff8ac5f562a821501d458dda7f5e6e01c9e10b561bb5f5954
3
+ size 246811660
fewshot/rpe1/eval_best.ckpt/rpe1_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d1cb9238ab01d63f76008a72e1a0ee8cb6b2290cac5f3d216b74cc6e5695c4a9
3
+ size 264204574
fewshot/rpe1/eval_last.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1e8a0d3aaab6d35a863784ccc91b001ee1922179e9cd7db20ee71219be3fe571
3
+ size 1054319856
fewshot/rpe1/eval_last.ckpt/rpe1_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:510561a3d6d49678f5d2f097b4b2aacb724304202bb3a542da9b303a7644c189
3
+ size 264146871
fewshot/rpe1/eval_last.ckpt/rpe1_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d1cb9238ab01d63f76008a72e1a0ee8cb6b2290cac5f3d216b74cc6e5695c4a9
3
+ size 264204574
zeroshot/hepg2/checkpoints/best.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fe6d7fc71948509117cf6ed2207a9c4136023b54ad05803dda507b87d7468c42
3
+ size 471699039
zeroshot/hepg2/checkpoints/final.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:207b9b8ed58d3db70a0671bd69d87b6ce4f2ddf0bda998fdc78d995189dfb766
3
+ size 471695263
zeroshot/hepg2/checkpoints/last.ckpt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0a568b0b635c6dce13fa4949ebede004fbeec45b632b25d5695b9d5456d95150
3
+ size 471699103
zeroshot/hepg2/eval_best.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3c03d841b7cc5c0b79bd024b56249c943bddc9348d8c9fcd1f8f08d78b834e97
3
+ size 782383816
zeroshot/hepg2/eval_best.ckpt/adata_real.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:04c67d73099117e3934a36e9703f60b857cba55da66c43790a679f5e8c174903
3
+ size 782383816
zeroshot/hepg2/eval_best.ckpt/hepg2_pred_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:138ee80b5ecd3bec4badd4e91466e74467e55c6e3247643e33bf65378c8079f1
3
+ size 299683790
zeroshot/hepg2/eval_best.ckpt/hepg2_real_de.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c0a9582aeec67230424e4d95fd26f5c2a6d9e841c13f804d46de1b74aaeddff7
3
+ size 331857105
zeroshot/hepg2/eval_last.ckpt/adata_pred.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0f363319aacafcbfa50495299346818d0f52a4d179ea65e8f8144fcea527329e
3
+ size 782383816