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README.md
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@@ -87,44 +87,65 @@ For **26 parent subjects**, F1-score improves to **0.934** with full metadata.
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from transformers import TextClassificationPipeline, pipeline
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import torch
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class ASJCMultiLabelPipeline(TextClassificationPipeline):
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def __init__(self, *args, **kwargs):
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self.threshold = kwargs.pop("threshold", None)
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super().__init__(*args, **kwargs)
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#
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if self.threshold is None:
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self.threshold = getattr(self.model.config, "threshold", 0.3)
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def postprocess(self, model_outputs, **kwargs):
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scores = torch.sigmoid(torch.tensor(model_outputs["logits"])).tolist()
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results = []
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for i, score in enumerate(scores):
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if score >= self.threshold:
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label = self.model.config.id2label[str(i)]
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results.append({"label": label, "score": float(score)})
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# Sort by
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results = sorted(results, key=lambda x: x["score"], reverse=True)
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return results
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```
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```python
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-
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text = (
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"title={Jodometrie}, "
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"container_title={Fresenius' Zeitschrift für analytische Chemie, Zeitschrift für analytische Chemie}, "
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"abstract={}"
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)
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result = pipe(text)
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print(result)
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#
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# - Clinical Biochemistry
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# - Analytical Chemistry
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```
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---
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from transformers import TextClassificationPipeline, pipeline
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import torch
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# Define the Custom Pipeline
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class ASJCMultiLabelPipeline(TextClassificationPipeline):
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"""
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Custom pipeline for multi-label ASJC classification.
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This pipeline:
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- Applies sigmoid to the model logits.
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- Filters labels by a threshold.
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- Returns all labels with scores above the threshold.
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Threshold can be specified during pipeline creation.
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If not provided, it defaults to the `threshold` in the model's config.json, or 0.3.
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"""
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def __init__(self, *args, **kwargs):
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self.threshold = kwargs.pop("threshold", None)
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super().__init__(*args, **kwargs)
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# Use threshold from config if none is passed explicitly
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if self.threshold is None:
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self.threshold = getattr(self.model.config, "threshold", 0.3)
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def postprocess(self, model_outputs, **kwargs):
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# Convert logits to probabilities using sigmoid
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scores = torch.sigmoid(torch.tensor(model_outputs["logits"])).tolist()
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results = []
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# Collect labels above the threshold
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for i, score in enumerate(scores):
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if score >= self.threshold:
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label = self.model.config.id2label[str(i)]
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results.append({"label": label, "score": float(score)})
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# Sort results by descending probability
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results = sorted(results, key=lambda x: x["score"], reverse=True)
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return results
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```
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```python
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# Create pipeline with the multi-label model
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pipe = pipeline(
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"text-classification",
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model="asjc-classification/scibert_multilabel_asjc_classifier"
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)
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# Example text input (title, container_title, abstract)
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text = (
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"title={Jodometrie}, "
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"container_title={Fresenius' Zeitschrift für analytische Chemie, Zeitschrift für analytische Chemie}, "
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"abstract={}"
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)
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# Get predictions
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result = pipe(text)
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print(result)
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# Expected labels (based on actual ASJC categories):
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# - Clinical Biochemistry
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# - Analytical Chemistry
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```
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---
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