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Browse files- config.json +98 -0
- model.safetensors +3 -0
config.json
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{
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"architectures": [
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"ESMFold2Model"
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],
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"confidence_head": {
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"distogram_bins": 39,
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"folding_trunk": {
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"dropout": 0.25,
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"n_heads": 8,
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"n_layers": 4
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},
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"max_dist": 50.75,
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"min_dist": 3.25,
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"num_pae_bins": 64,
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"num_pde_bins": 64,
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"num_plddt_bins": 50
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},
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"d_pair": 256,
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"d_single": 384,
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"disable_msa_features": false,
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"dtype": "float32",
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"folding_trunk": {
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"dropout": 0.25,
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"n_heads": 8,
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"n_layers": 24
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},
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"inputs": {
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"atom_encoder": {
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"d_atom": 128,
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"d_token": 768,
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"expansion_ratio": 2,
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"n_blocks": 3,
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"n_heads": 4,
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"n_spatial_rope_pairs_per_axis": 2,
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"n_uid_rope_pairs": 10,
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"spatial_rope_base_frequency": 20.0,
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"swa_window_size": 128,
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"uid_rope_base_frequency": 10000.0
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},
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"d_inputs": 451
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},
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"lm_d_model": 2560,
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"lm_encoder": {
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"enabled": true,
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"n_layers": 4
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},
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"lm_num_layers": 80,
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"model_type": "esmfold2_v2",
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"msa_encoder": {
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"d_hidden": 32,
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"d_msa": 128,
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"enabled": false,
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"msa_head_width": 32,
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"n_heads_msa": 8,
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"n_layers": 4
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},
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"msa_encoder_overwrite": true,
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"n_relative_chain_bins": 2,
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"n_relative_residx_bins": 32,
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"num_diffusion_samples": 32,
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"num_recycles": 3,
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"parcae": {
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"coda_n_layers": 2,
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"enabled": true,
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"max_steps": 6,
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"min_steps": 1,
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"poisson_mean": 3.0
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},
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"structure_head": {
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"diffusion_module": {
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"atom_num_blocks": 3,
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"atom_num_heads": 4,
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"c_atom": 128,
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"c_s_inputs": 451,
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"c_token": 768,
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"c_z": 256,
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"fourier_dim": 256,
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"relpos_r_max": 32,
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"relpos_s_max": 2,
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"sigma_data": 16.0,
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"token_num_blocks": 12,
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"token_num_heads": 16,
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"transition_multiplier": 2
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},
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"distogram_bins": 64,
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"gamma_0": 0.8,
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"gamma_min": 1.0,
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"inference_num_steps": 14,
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"inference_p": 7.0,
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"inference_s_max": 160.0,
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"inference_s_min": 0.0004,
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"noise_scale": 1.003,
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"step_scale": 1.5,
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"train_noise_log_mean": -1.2,
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"train_noise_log_std": 1.5
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},
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"transformers_version": "4.57.6"
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}
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model.safetensors
ADDED
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:60ca19f2898188beba92944365f7b909efd9c99212f5018af75cc47cd9a6184a
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size 755416924
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