| { |
| "architectures": [ |
| "EsmFold2Model" |
| ], |
| "atom_encoder": { |
| "head_dim": 32, |
| "hidden_size": 128, |
| "intermediate_size": 256, |
| "model_type": "", |
| "num_attention_heads": 4, |
| "num_hidden_layers": 3, |
| "num_spatial_rope_pairs_per_axis": 2, |
| "num_uid_rope_pairs": 10, |
| "output_dim": 384, |
| "spatial_rope_base_frequency": 20.0, |
| "uid_rope_base_frequency": 10000.0 |
| }, |
| "atom_feature_dim": 389, |
| "char_vocab_size": 64, |
| "chunk_size": 64, |
| "confidence_head": { |
| "distogram_bins": 39, |
| "eps": 1e-06, |
| "max_dist": 50.75, |
| "min_dist": 3.25, |
| "model_type": "", |
| "num_hidden_layers": 4, |
| "num_pae_bins": 64, |
| "num_pde_bins": 64, |
| "num_plddt_bins": 50 |
| }, |
| "dtype": "float32", |
| "esmc_config": { |
| "attention_bias": false, |
| "attention_dropout": 0.0, |
| "bos_token_id": 0, |
| "classifier_dropout": 0.1, |
| "dtype": "float32", |
| "eos_token_id": 2, |
| "head_dim": 64, |
| "hidden_act": "silu", |
| "hidden_size": 2560, |
| "initializer_range": 0.02, |
| "intermediate_size": 6912, |
| "mask_token_id": 32, |
| "max_position_embeddings": 2048, |
| "mlp_bias": false, |
| "model_type": "esmc", |
| "num_attention_heads": 40, |
| "num_hidden_layers": 80, |
| "num_key_value_heads": 40, |
| "pad_token_id": 1, |
| "rope_parameters": { |
| "rope_theta": 10000.0, |
| "rope_type": "default" |
| }, |
| "tie_word_embeddings": false, |
| "vocab_size": 64 |
| }, |
| "folding_trunk_num_hidden_layers": 48, |
| "hidden_size": 384, |
| "lm_encoder": { |
| "lm_dropout": 0.25, |
| "model_type": "", |
| "num_hidden_layers": 4, |
| "per_loop_lm_dropout": true |
| }, |
| "max_atomic_number": 128, |
| "max_atoms_per_token": 23, |
| "max_chars": 4, |
| "model_type": "esmfold2", |
| "msa_encoder": { |
| "head_dim": 16, |
| "hidden_size": 128, |
| "intermediate_size": 512, |
| "model_type": "", |
| "num_attention_heads": 8, |
| "num_hidden_layers": 4, |
| "outer_hidden_size": 32, |
| "outer_product_chunk_size": null |
| }, |
| "num_loops": 3, |
| "num_relative_chain_bins": 2, |
| "num_relative_residx_bins": 32, |
| "num_res_types": 33, |
| "pair_transition_intermediate_size": 1024, |
| "pairwise_hidden_size": 256, |
| "parcae_num_coda_layers": 2, |
| "single_inputs_size": 451, |
| "sliding_window": 128, |
| "structure_head": { |
| "diffusion_module": { |
| "_name_or_path": "", |
| "architectures": null, |
| "atom_encoder": { |
| "_name_or_path": "", |
| "architectures": null, |
| "chunk_size_feed_forward": 0, |
| "dtype": null, |
| "head_dim": 32, |
| "hidden_size": 128, |
| "id2label": { |
| "0": "LABEL_0", |
| "1": "LABEL_1" |
| }, |
| "intermediate_size": 256, |
| "is_encoder_decoder": false, |
| "label2id": { |
| "LABEL_0": 0, |
| "LABEL_1": 1 |
| }, |
| "model_type": "", |
| "num_attention_heads": 4, |
| "num_hidden_layers": 3, |
| "num_spatial_rope_pairs_per_axis": 2, |
| "num_uid_rope_pairs": 10, |
| "output_attentions": false, |
| "output_dim": 768, |
| "output_hidden_states": false, |
| "problem_type": null, |
| "return_dict": true, |
| "spatial_rope_base_frequency": 20.0, |
| "uid_rope_base_frequency": 10000.0 |
| }, |
| "chunk_size_feed_forward": 0, |
| "dtype": null, |
| "fourier_dim": 256, |
| "head_dim": 48, |
| "hidden_size": 768, |
| "id2label": { |
| "0": "LABEL_0", |
| "1": "LABEL_1" |
| }, |
| "intermediate_size": 1536, |
| "is_encoder_decoder": false, |
| "label2id": { |
| "LABEL_0": 0, |
| "LABEL_1": 1 |
| }, |
| "model_type": "", |
| "num_attention_heads": 16, |
| "num_hidden_layers": 12, |
| "output_attentions": false, |
| "output_hidden_states": false, |
| "pair_intermediate_size": 512, |
| "problem_type": null, |
| "return_dict": true, |
| "sigma_data": 16.0 |
| }, |
| "gamma_0": 0.8, |
| "gamma_min": 1.0, |
| "inference_exponent": 7.0, |
| "inference_num_steps": 14, |
| "inference_sigma_cap": 256.0, |
| "inference_sigma_max_ratio": 160.0, |
| "inference_sigma_min_ratio": 0.0004, |
| "model_type": "", |
| "noise_scale": 1.003, |
| "num_diffusion_samples": 32, |
| "num_distogram_bins": 64, |
| "step_scale": 1.5 |
| }, |
| "transformers_version": "5.16.0.dev0" |
| } |
|
|