ESMFold2 / config.json
ebetica's picture
hf(esmfold2): patch config.json — model_type "esmfold2_v2" -> "esmfold2"; type '<unset>' -> 'release'
c899ee7 verified
{
"architectures": [
"ESMFold2Model"
],
"confidence_head": {
"distogram_bins": 39,
"enabled": true,
"folding_trunk": {
"dropout": 0.25,
"n_heads": 8,
"n_layers": 4
},
"max_dist": 50.75,
"min_dist": 3.25,
"num_pae_bins": 64,
"num_pde_bins": 64,
"num_plddt_bins": 50
},
"d_pair": 256,
"d_single": 384,
"disable_msa_features": false,
"dtype": "float32",
"esmc_id": "biohub/ESMC-6B",
"folding_trunk": {
"dropout": 0.25,
"n_heads": 8,
"n_layers": 48
},
"force_lm_dropout_during_inference": false,
"inputs": {
"atom_encoder": {
"d_atom": 128,
"d_token": 768,
"expansion_ratio": 2,
"n_blocks": 3,
"n_heads": 4,
"n_spatial_rope_pairs_per_axis": 2,
"n_uid_rope_pairs": 10,
"spatial_rope_base_frequency": 20.0,
"swa_window_size": 128,
"uid_rope_base_frequency": 10000.0
},
"d_inputs": 451
},
"lm_d_model": 2560,
"lm_dropout": 0.0,
"lm_encoder": {
"enabled": true,
"lm_dropout": 0.25,
"n_layers": 4,
"per_loop_lm_dropout": true
},
"lm_num_layers": 80,
"model_type": "esmfold2",
"msa_encoder": {
"d_hidden": 32,
"d_msa": 128,
"enabled": true,
"msa_head_width": 16,
"n_heads_msa": 8,
"n_layers": 4
},
"msa_encoder_overwrite": true,
"n_relative_chain_bins": 2,
"n_relative_residx_bins": 32,
"num_diffusion_samples": 32,
"num_loops": 3,
"parcae": {
"coda_n_layers": 2,
"enabled": true,
"max_steps": 6,
"min_steps": 1,
"poisson_mean": 3.0
},
"structure_head": {
"diffusion_module": {
"atom_num_blocks": 3,
"atom_num_heads": 4,
"c_atom": 128,
"c_s_inputs": 451,
"c_token": 768,
"c_z": 256,
"fourier_dim": 256,
"relpos_r_max": 32,
"relpos_s_max": 2,
"sigma_data": 16.0,
"token_num_blocks": 12,
"token_num_heads": 16,
"transition_multiplier": 2
},
"distogram_bins": 64,
"gamma_0": 0.8,
"gamma_min": 1.0,
"inference_num_steps": 14,
"inference_p": 7.0,
"inference_s_max": 160.0,
"inference_s_min": 0.0004,
"noise_scale": 1.003,
"step_scale": 1.5,
"train_noise_log_mean": -1.2,
"train_noise_log_std": 1.5
},
"transformers_version": "4.57.6",
"type": "release"
}