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README.md
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@@ -55,7 +55,6 @@ pip install esm@git+https://github.com/Biohub/esm.git@c94ed8d
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You can fold your first protein with:
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```py
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# pip install esm@git+https://github.com/Biohub/esm.git@c94ed8d
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from transformers.models.esmfold2.modeling_esmfold2 import ESMFold2Model
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# Ubiquitin (PDB 1UBQ)
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You can also fold complex biomolecules — proteins, DNA/RNA (with modified residues), and small-molecule ligands all at once. Here's an example folding the HhaI DNA methyltransferase + its cognate DNA (with a trapped 5-fluoro-2′-deoxycytidine, CCD `C36`) + the SAH cofactor (PDB [1MHT](https://www.rcsb.org/structure/1MHT)):
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```py
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# pip install esm@git+https://github.com/Biohub/esm.git@c94ed8d
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from esm.models.esmfold2 import (
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DNAInput,
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ESMFold2InputBuilder,
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For the Biohub API, first generate an [API key](https://biohub.ai/developer-console/api-keys) and add it to your Biohub account. The code below assumes the environment variable `ESM_API_KEY=$YOUR_API_KEY`.
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```py
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# pip install esm@git+https://github.com/Biohub/esm.git@c94ed8d
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import os
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from esm.models.esmfold2 import (
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You can fold your first protein with:
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```py
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from transformers.models.esmfold2.modeling_esmfold2 import ESMFold2Model
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# Ubiquitin (PDB 1UBQ)
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You can also fold complex biomolecules — proteins, DNA/RNA (with modified residues), and small-molecule ligands all at once. Here's an example folding the HhaI DNA methyltransferase + its cognate DNA (with a trapped 5-fluoro-2′-deoxycytidine, CCD `C36`) + the SAH cofactor (PDB [1MHT](https://www.rcsb.org/structure/1MHT)):
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```py
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from esm.models.esmfold2 import (
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DNAInput,
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ESMFold2InputBuilder,
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For the Biohub API, first generate an [API key](https://biohub.ai/developer-console/api-keys) and add it to your Biohub account. The code below assumes the environment variable `ESM_API_KEY=$YOUR_API_KEY`.
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```py
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import os
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from esm.models.esmfold2 import (
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