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zmgong commited on
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81389e3
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1 Parent(s): a285463

Reorganize the position of the checkpoints for the release of version 1.0.

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Files changed (19) hide show
  1. ckpt/BarcodeBERT/new_checkpoints/trained_with_5m/BIOSCAN-5M-BEST_k4_6_6_w1_m0_r0.pt +3 -0
  2. ckpt/BarcodeBERT/new_checkpoints/trained_with_canada_1_5M/CANADA-1.5M-BEST_k4_4_4_w1_m0_r0_wd.pt +3 -0
  3. ckpt/BarcodeBERT/{5_mer → old_checkpoints/trained_with_canada_1_5M}/model_41.pth +0 -0
  4. ckpt/bioscan_clip/{final_experiments/image_dna_4gpu_50epoch → ver_1_0/bioscan_1m/image_dna_4gpu}/best.pth +0 -0
  5. ckpt/bioscan_clip/{final_experiments/image_dna_text_4gpu_50epoch → ver_1_0/bioscan_1m/image_dna_text_4gpu}/best.pth +0 -0
  6. ckpt/bioscan_clip/{new_5M_training/trained_with_5M_image_dna → ver_1_0/bioscan_5m/image_dna_4gpu}/best.pth +0 -0
  7. ckpt/bioscan_clip/{new_5M_training/trained_with_5M_image_dna_text → ver_1_0/bioscan_5m/image_dna_text_4gpu}/best.pth +0 -0
  8. extracted_embedding/ver_1_0/bioscan_1m/image_dna_4gpu/extracted_feature_from_test_split.hdf5 +3 -0
  9. extracted_embedding/ver_1_0/bioscan_1m/image_dna_4gpu/extracted_feature_from_val_split.hdf5 +3 -0
  10. extracted_embedding/ver_1_0/bioscan_1m/image_dna_text_4gpu/extracted_feature_from_test_split.hdf5 +3 -0
  11. extracted_embedding/ver_1_0/bioscan_1m/image_dna_text_4gpu/extracted_feature_from_val_split.hdf5 +3 -0
  12. extracted_embedding/ver_1_0/bioscan_1m/no_align_baseline/extracted_feature_from_test_split.hdf5 +3 -0
  13. extracted_embedding/ver_1_0/bioscan_1m/no_align_baseline/extracted_feature_from_val_split.hdf5 +3 -0
  14. extracted_embedding/ver_1_0/bioscan_5m/image_dna_4gpu/extracted_feature_from_test_split.hdf5 +3 -0
  15. extracted_embedding/ver_1_0/bioscan_5m/image_dna_4gpu/extracted_feature_from_val_split.hdf5 +3 -0
  16. extracted_embedding/ver_1_0/bioscan_5m/image_dna_text_4gpu/extracted_feature_from_test_split.hdf5 +3 -0
  17. extracted_embedding/ver_1_0/bioscan_5m/image_dna_text_4gpu/extracted_feature_from_val_split.hdf5 +3 -0
  18. extracted_embedding/ver_1_0/bioscan_5m/no_alignment_baseline/extracted_feature_from_test_split.hdf5 +3 -0
  19. extracted_embedding/ver_1_0/bioscan_5m/no_alignment_baseline/extracted_feature_from_val_split.hdf5 +3 -0
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ckpt/BarcodeBERT/{5_mer → old_checkpoints/trained_with_canada_1_5M}/model_41.pth RENAMED
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ckpt/bioscan_clip/{final_experiments/image_dna_4gpu_50epoch → ver_1_0/bioscan_1m/image_dna_4gpu}/best.pth RENAMED
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ckpt/bioscan_clip/{final_experiments/image_dna_text_4gpu_50epoch → ver_1_0/bioscan_1m/image_dna_text_4gpu}/best.pth RENAMED
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ckpt/bioscan_clip/{new_5M_training/trained_with_5M_image_dna → ver_1_0/bioscan_5m/image_dna_4gpu}/best.pth RENAMED
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ckpt/bioscan_clip/{new_5M_training/trained_with_5M_image_dna_text → ver_1_0/bioscan_5m/image_dna_text_4gpu}/best.pth RENAMED
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