drop .gitignore from HF (blocks data + checkpoint uploads)
Browse files- .gitignore +0 -96
.gitignore
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# --- Python ---
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__pycache__/
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*.py[cod]
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*.egg-info/
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*.egg
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dist/
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build/
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# --- Virtual environments ---
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.venv/
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venv/
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env/
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.python-version
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# --- Editor / IDE ---
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.vscode/
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.idea/
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*.swp
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*.swo
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# --- OS ---
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.DS_Store
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Thumbs.db
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# --- Jupyter ---
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.ipynb_checkpoints/
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# --- Test / type-check caches ---
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.pytest_cache/
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.mypy_cache/
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.ruff_cache/
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.coverage
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htmlcov/
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# --- Logs ---
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*.log
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auto_push.log
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logs/
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# --- Environment / secrets ---
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.env
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.env.*
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# --- Large data (not versioned) ---
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data/
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data/raw/
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data/processed/
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data/corpus/
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*.h5ad
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*.h5
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*.loom
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# --- Intermediate numerical arrays ---
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*.npy
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*.npz
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# --- Model checkpoints (large, regenerable) ---
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/models/
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checkpoints/
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checkpoints/*/best_model.pt
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checkpoints/*/training_history.json
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checkpoints/*.pt
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checkpoints/**/*.pt
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# --- Legacy artefacts (preserved locally only; 83GB) ---
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# --- Figures (regenerable) — but paper + supplement PDFs kept ---
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figures/*
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!figures/*.pdf
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!figures/supplement/
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figures/supplement/*
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!figures/supplement/*.pdf
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# --- Generated docs / scratch ---
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presentation/
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results.md
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PLAN.md
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# Caches
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__pycache__/
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.pytest_cache/
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*.pyc
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*.pyo
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# IDE
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.vscode/
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.idea/
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# Logs (volume)
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logs/*.log
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# LaTeX build artefacts
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paper/*.aux
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paper/*.log
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paper/*.out
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paper/*.toc
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