#!/bin/bash PANDA_ROOT="${PANDA_ROOT:-$(cd "$(dirname "${BASH_SOURCE[0]}")/../.." && pwd)}" # retrain all 6 panda models (3 systems x 2 variants), sequentially to fit GPU set -e cd "$PANDA_ROOT" export LD_LIBRARY_PATH=$(python -c "import site,os; print(os.path.join(site.getsitepackages()[0],'nvidia','cusparselt','lib'))"):/home/bcheng/.conda/pkgs/libstdcxx-15.2.0-h39759b7_7/lib/:${LD_LIBRARY_PATH:-} echo "=== SKIN PCA ===" python -m scripts.common.train_panda pan_skin --variant pca --epochs 8 echo "=== SKIN MARKER ===" python -m scripts.common.train_panda pan_skin --variant marker --epochs 8 echo "=== HSC PCA ===" python -m scripts.common.train_panda hematopoiesis --variant pca --epochs 8 echo "=== HSC MARKER ===" python -m scripts.common.train_panda hematopoiesis --variant marker --epochs 8 echo "=== PANCREAS PCA ===" python -m scripts.common.train_panda pancreas --variant pca --epochs 8 echo "=== PANCREAS MARKER ===" python -m scripts.common.train_panda pancreas --variant marker --epochs 8 echo "=== ALL DONE ==="