mfe/SFT_circ10k_subset/summary.json

{
  "model": "UCL-CSSB/PlasmidGPT-SFT (sft_real)",
  "temperature": 1.0,
  "source": "/opt/dlami/nvme/PlasmidRL/results/eval_8prompt_t1/SFT_real/outputs.csv",
  "sampling": "100 stratified across 8 prompts (random_state=42)",
  "circular_max_bp": 10000,
  "window_bp": 500,
  "stride_bp": 250,
  "params": "Mathews 2004 DNA params",
  "n_sequences": 96,
  "n_with_mfe": 96,
  "n_circular_folded": 86,
  "n_windowed": 10,
  "length_mean": 4908.28125,
  "length_median": 3483.0,
  "length_max": 20591.0,
  "gc_mean": 0.4871712204994288,
  "mfe_density_dna_mean": -0.17157306498113656,
  "mfe_density_dna_std": 0.06362283307156515,
  "mfe_density_dna_median": -0.16076698505337156,
  "compute_time_sec": 566.8939566612244,
  "circular_only_subset": {
    "n": 86,
    "mfe_density_dna_mean": -0.17414164372266186,
    "mfe_density_dna_std": 0.06667195709424756,
    "mfe_density_dna_median": -0.16295566908545314
  }
}